View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8019_high_22 (Length: 236)

Name: NF8019_high_22
Description: NF8019
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8019_high_22
NF8019_high_22
[»] chr1 (3 HSPs)
chr1 (13-212)||(4677501-4677700)
chr1 (39-208)||(34465213-34465382)
chr1 (32-211)||(15596021-15596199)
[»] chr7 (24 HSPs)
chr7 (20-211)||(8660193-8660384)
chr7 (20-212)||(1302260-1302452)
chr7 (33-211)||(3148333-3148511)
chr7 (20-211)||(8655298-8655489)
chr7 (24-211)||(8668418-8668605)
chr7 (40-181)||(27829337-27829478)
chr7 (38-211)||(6790377-6790550)
chr7 (40-208)||(13332115-13332283)
chr7 (30-211)||(8647660-8647841)
chr7 (75-211)||(7876796-7876932)
chr7 (40-208)||(10492966-10493134)
chr7 (24-178)||(8584531-8584685)
chr7 (40-178)||(8630197-8630335)
chr7 (39-175)||(17261360-17261496)
chr7 (39-208)||(17269068-17269237)
chr7 (75-211)||(8602738-8602874)
chr7 (84-169)||(8591411-8591496)
chr7 (69-159)||(8582661-8582751)
chr7 (69-211)||(8610662-8610804)
chr7 (84-159)||(8635513-8635588)
chr7 (117-172)||(8546721-8546776)
chr7 (75-157)||(8104069-8104151)
chr7 (75-159)||(29577003-29577087)
chr7 (75-211)||(29581127-29581263)
[»] chr4 (5 HSPs)
chr4 (24-211)||(9323026-9323213)
chr4 (24-211)||(9377505-9377692)
chr4 (24-211)||(9334998-9335184)
chr4 (39-147)||(35133422-35133530)
chr4 (21-205)||(30776067-30776251)
[»] chr5 (2 HSPs)
chr5 (40-175)||(42554185-42554320)
chr5 (30-211)||(28220906-28221087)
[»] chr2 (9 HSPs)
chr2 (74-212)||(16656561-16656699)
chr2 (36-148)||(12244428-12244540)
chr2 (40-169)||(12257918-12258047)
chr2 (37-175)||(43626286-43626424)
chr2 (39-151)||(7543245-7543357)
chr2 (39-174)||(12235766-12235901)
chr2 (30-208)||(16661031-16661209)
chr2 (39-151)||(12000301-12000413)
chr2 (40-151)||(14705432-14705543)
[»] chr8 (2 HSPs)
chr8 (40-211)||(43745793-43745961)
chr8 (74-172)||(12529871-12529969)
[»] chr6 (1 HSPs)
chr6 (29-109)||(28911272-28911352)


Alignment Details
Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 13 - 212
Target Start/End: Complemental strand, 4677700 - 4677501
Alignment:
Q  13 gagtagcagagaatagaaatagatatttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtc 112  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  4677700 gagtagcagagaatagaaatagaaatttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcatc 4677601  T
Q  113 agtaaaagcaacaaaagaaggtgttgttttgttgccttgttcattgtaaataatctccactctgttgtgattctccagccacacagcaacacatgaataa 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4677600 agtaaaagcaacaaaagaaggtgttgttttgttgccttgttcattgtaaataatctccactctgttgtgattctccagccacacagcaacacatgaataa 4677501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 39 - 208
Target Start/End: Complemental strand, 34465382 - 34465213
Alignment:
Q  39 ttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgttg 138  Q
    |||||||| |||||||| |  | |||||| |||| ||||||||||||||||||||| ||||| |||||||| | |||||||||||||||||||||||| |    
T  34465382 ttaccaaaaacagtgttctgtgggttggtagcagtttgattcttagcagcattaccgatcaatctttgatcatgagtaaaagcaacaaaagaaggtgtgg 34465283  T
Q  139 ttttgttgccttgttcattgtaaataatctccactctgttgtgattctccagccacacagcaacacatga 208  Q
    || |||| ||||| ||||||| ||||||||| |||||  |||| |  ||| |||| || |||||||||||    
T  34465282 ttgtgttaccttggtcattgtcaataatctctactctactgtgttgttcctgccatactgcaacacatga 34465213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 211
Target Start/End: Original strand, 15596021 - 15596199
Alignment:
Q  32 tagatatttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaa 131  Q
    |||| ||||||||||||| |||||||  | || || ||||| |||| |||||||||||| |||||||||||||||||| | ||| |||| ||||||||||    
T  15596021 tagaaatttaccaaagac-gtgtttttggggtcggaggcagcttgactcttagcagcatcaccaatcaacctttgatcattagtgaaagaaacaaaagaa 15596119  T
Q  132 ggtgttgttttgttgccttgttcattgtaaataatctccactctgttgtgattctccagccacacagcaacacatgaata 211  Q
    |||||  || |||| ||||| |||||||  |||||||| ||||| || || |  || ||||||||||||||||| |||||    
T  15596120 ggtgtaattctgtttccttggtcattgtggataatctcgactctattctgttcatcaagccacacagcaacacaagaata 15596199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 6e-52; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 8660193 - 8660384
Alignment:
Q  20 agagaatagaaatagatatttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaa 119  Q
    |||||||| ||||||| ||| |||||| ||||||||| |||  ||||| ||||  |||||||||||||||| |||||||||||||||||||||||| |||    
T  8660193 agagaatacaaatagaaattaaccaaaaacagtgtttacaggattggttgcagcctgattcttagcagcatcaccaatcaacctttgatcgtcagtgaaa 8660292  T
Q  120 gcaacaaaagaaggtgttgttttgttgccttgttcattgtaaataatctccactctgttgtgattctccagccacacagcaacacatgaata 211  Q
    |||||||| ||||||||||||||||| ||||| || ||||| || ||||| ||||  ||||||||||||||||||||||||||||| |||||    
T  8660293 gcaacaaatgaaggtgttgttttgtttccttggtcgttgtagatgatctcgactcgattgtgattctccagccacacagcaacacacgaata 8660384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 20 - 212
Target Start/End: Original strand, 1302260 - 1302452
Alignment:
Q  20 agagaatagaaatagatatttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaa 119  Q
    |||||||| ||| ||| |||||||||| ||||| |||||||  ||||| ||||  |||||||||||||||| ||| |||||||||||||| || || |||    
T  1302260 agagaatacaaagagaaatttaccaaaaacagtattttcaggattggttgcagcctgattcttagcagcatcaccgatcaacctttgatcatcggtgaaa 1302359  T
Q  120 gcaacaaaagaaggtgttgttttgttgccttgttcattgtaaataatctccactctgttgtgattctccagccacacagcaacacatgaataa 212  Q
    ||||||||||| |||||||||||||||||||| || ||||| || ||||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  1302360 gcaacaaaagacggtgttgttttgttgccttggtcgttgtagatgatctctactctattgtgattctccagccacacagcaacacacgaataa 1302452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 33 - 211
Target Start/End: Original strand, 3148333 - 3148511
Alignment:
Q  33 agatatttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaag 132  Q
    |||||||||||||| ||||||||||||| ||| |||| || ||||||||||||||||| ||||| |||||||||||| ||||| ||||||||||||||||    
T  3148333 agatatttaccaaaaacagtgttttcagggtttgtgggagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaag 3148432  T
Q  133 gtgttgttttgttgccttgttcattgtaaataatctccactctgttgtgattctccagccacacagcaacacatgaata 211  Q
    |||| |||||||||||||| ||||||| ||||||||| ||||||||||| |  || ||||| |||||||| || |||||    
T  3148433 gtgtggttttgttgccttggtcattgtgaataatctcaactctgttgtgctcatcgagccaaacagcaacgcacgaata 3148511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 8655298 - 8655489
Alignment:
Q  20 agagaatagaaatagatatttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaa 119  Q
    |||||||| ||||||| |||||||||| ||||||||||| | |||||| ||||||||||||| |||  |||| ||||||||||||||||  ||||| |||    
T  8655298 agagaataaaaatagaaatttaccaaatacagtgttttcggggttggtagcagattgattctcagctccattgccaatcaacctttgataatcagtgaaa 8655397  T
Q  120 gcaacaaaagaaggtgttgttttgttgccttgttcattgtaaataatctccactctgttgtgattctccagccacacagcaacacatgaata 211  Q
    ||||||| ||||||||| ||| | |||||||| ||||||| ||||||||| ||||| |||||||  || |||||||||||||||||||||||    
T  8655398 gcaacaacagaaggtgtagttctattgccttgatcattgtgaataatctcaactctattgtgatcgtcaagccacacagcaacacatgaata 8655489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 24 - 211
Target Start/End: Original strand, 8668418 - 8668605
Alignment:
Q  24 aatagaaatagatatttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaa 123  Q
    |||||||||||| |||||||||||| ||||||||||| ||| || ||||||||||||||||||||||  |||||||||||||| || |   | |||||||    
T  8668418 aatagaaatagaaatttaccaaagatagtgttttcagggttagtagcagattgattcttagcagcatcgccaatcaacctttgttcattgttgaaagcaa 8668517  T
Q  124 caaaagaaggtgttgttttgttgccttgttcattgtaaataatctccactctgttgtgattctccagccacacagcaacacatgaata 211  Q
    |||||||||||||| ||  ||| ||||| ||||||| ||||||||| ||||| | ||| |  || |||||||||||||||||||||||    
T  8668518 caaaagaaggtgttattcggtttccttgatcattgtgaataatctcaactctttggtgttgatcaagccacacagcaacacatgaata 8668605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 40 - 181
Target Start/End: Complemental strand, 27829478 - 27829337
Alignment:
Q  40 taccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgttgt 139  Q
    ||||||||| |||||||| || |||||  |||| ||| ||||||||||||| |||||||||||| || | ||| || ||||||||| |||||||||||||    
T  27829478 taccaaagatagtgttttgagggttggaagcagcttggttcttagcagcatcaccaatcaacctctgtttgtccgtgaaagcaacacaagaaggtgttgt 27829379  T
Q  140 tttgttgccttgttcattgtaaataatctccactctgttgtg 181  Q
     ||||||||||||||||||| |||||||||||||||||||||    
T  27829378 cttgttgccttgttcattgtgaataatctccactctgttgtg 27829337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 38 - 211
Target Start/End: Original strand, 6790377 - 6790550
Alignment:
Q  38 tttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgtt 137  Q
    |||||| |||| ||||||||  | ||||||||||| ||||| ||||||||||| ||| ||||||||||| || || || ||||||||||||||||||||     
T  6790377 tttaccgaagatagtgttttgcgggttggtggcagcttgatacttagcagcatcaccgatcaacctttggtcatcggtgaaagcaacaaaagaaggtgtg 6790476  T
Q  138 gttttgttgccttgttcattgtaaataatctccactctgttgtgattctccagccacacagcaacacatgaata 211  Q
    |||||||| ||||| ||||||| ||||||||| ||||| ||||| |  || ||||||||| ||||||| |||||    
T  6790477 gttttgttaccttggtcattgtgaataatctcaactctattgtgttcatcaagccacacaccaacacaagaata 6790550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 208
Target Start/End: Complemental strand, 13332283 - 13332115
Alignment:
Q  40 taccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgttgt 139  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||| ||||||| ||||||||| |||||||| |   | |||||||||||||||||||| ||    
T  13332283 taccaaagatagtgttttcagggttagtggcagattgattcttggcagcatcaccaatcaatctttgatcattgttgaaagcaacaaaagaaggtgtagt 13332184  T
Q  140 tttgttgccttgttcattgtaaataatctccactctgttgtgattctccagccacacagcaacacatga 208  Q
    | | || ||||| ||||||| ||||||||| ||||| | ||| |  || ||||||||||||||||||||    
T  13332183 tctatttccttgatcattgtgaataatctcaactctttggtgttcatcaagccacacagcaacacatga 13332115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 30 - 211
Target Start/End: Original strand, 8647660 - 8647841
Alignment:
Q  30 aatagatatttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaag 129  Q
    |||||| |||||||||||||||||||   || ||| |  ||||  ||||| ||||| |||| |||||||||||||||||| || || |||||||||||||    
T  8647660 aatagaaatttaccaaagacagtgttggtagggttagaagcagcctgatttttagcggcatcaccaatcaacctttgatcatcggtgaaagcaacaaaag 8647759  T
Q  130 aaggtgttgttttgttgccttgttcattgtaaataatctccactctgttgtgattctccagccacacagcaacacatgaata 211  Q
    ||||||| ||| |||| ||||| ||||||| ||||||||| ||||| ||||| |  || ||||||||||||||||| |||||    
T  8647760 aaggtgtagttctgtttccttgatcattgtgaataatctcaactctattgtgttcatcaagccacacagcaacacacgaata 8647841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 75 - 211
Target Start/End: Complemental strand, 7876932 - 7876796
Alignment:
Q  75 tgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgttgttttgttgccttgttcattgtaaataatctccactc 174  Q
    ||||| || ||||||| |||||||||||||||||| |  || |||||||||||||||||||||||| |||||||||||||||||| |||||| || ||||    
T  7876932 tgatttttggcagcatcaccaatcaacctttgatcattcgtgaaagcaacaaaagaaggtgttgttctgttgccttgttcattgtgaataatttcgactc 7876833  T
Q  175 tgttgtgattctccagccacacagcaacacatgaata 211  Q
    | ||||| |  || ||||||||||||||||| |||||    
T  7876832 tattgtgttcatcaagccacacagcaacacaggaata 7876796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 40 - 208
Target Start/End: Complemental strand, 10493134 - 10492966
Alignment:
Q  40 taccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgttgt 139  Q
    |||||||||| |||||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||| |   | |||||||||||||||||||| ||    
T  10493134 taccaaagacggtgttttcagggttagtggcagattgattcttagcagcatcaccgatcaacctttgatcattgttgaaagcaacaaaagaaggtgtagt 10493035  T
Q  140 tttgttgccttgttcattgtaaataatctccactctgttgtgattctccagccacacagcaacacatga 208  Q
    | | || ||||| ||||||| |||||| || ||||| | ||| |  || ||||| ||||||||||||||    
T  10493034 tctatttccttgatcattgtgaataatttcaactctttggtgttcatcaagccatacagcaacacatga 10492966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 178
Target Start/End: Complemental strand, 8584685 - 8584531
Alignment:
Q  24 aatagaaatagatatttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaa 123  Q
    |||||| ||||| || |||||||||||||||| || | |||| | ||||  |||| ||||||||||  ||||| |||||||||||| || ||||||||||    
T  8584685 aatagagatagaaatataccaaagacagtgttctctgggttgatagcagcctgatccttagcagcaccaccaaccaacctttgatcatcggtaaaagcaa 8584586  T
Q  124 caaaagaaggtgttgttttgttgccttgttcattgtaaataatctccactctgtt 178  Q
    |||| ||||||||  |||| |||||||  || |||| ||||||||| ||||||||    
T  8584585 caaaggaaggtgtgattttattgccttcatcgttgtgaataatctcaactctgtt 8584531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 178
Target Start/End: Original strand, 8630197 - 8630335
Alignment:
Q  40 taccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgttgt 139  Q
    ||||||||||||||||||  | |||| ||||||  |||| ||||||||||  ||||| |||||||||||| || ||||||||||| || ||||||||  |    
T  8630197 taccaaagacagtgttttgtgggttgatggcagcctgatccttagcagcaccaccaaccaacctttgatcatcggtaaaagcaacgaaggaaggtgtgat 8630296  T
Q  140 tttgttgccttgttcattgtaaataatctccactctgtt 178  Q
    ||| |||||||  ||||||| ||||||||| ||||||||    
T  8630297 tttattgccttcatcattgtgaataatctcaactctgtt 8630335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 39 - 175
Target Start/End: Original strand, 17261360 - 17261496
Alignment:
Q  39 ttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgttg 138  Q
    ||||||||||| |||||||| | |||  |||||| |||||||||||| |||| ||| |||||||||| ||| | || |||||||||||||||||| ||      
T  17261360 ttaccaaagacggtgttttctgggtttatggcagcttgattcttagcggcatcaccgatcaacctttcatctttagcaaaagcaacaaaagaaggagtaa 17261459  T
Q  139 ttttgttgccttgttcattgtaaataatctccactct 175  Q
    ||||||| ||||| ||||||| ||| ||||| |||||    
T  17261460 ttttgtttccttgatcattgtgaatgatctcaactct 17261496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 208
Target Start/End: Original strand, 17269068 - 17269237
Alignment:
Q  39 ttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgttg 138  Q
    ||||||||||| |||||||| | |||  |||||| |||||||||||| | || ||| || ||||||| ||| | || ||||||||||||||| || || |    
T  17269068 ttaccaaagacggtgttttctgggttcatggcagcttgattcttagcggaatcaccgataaacctttcatctttagcaaaagcaacaaaagacggagtag 17269167  T
Q  139 ttttgttgccttgttcattgtaaataatctccactctgttgtgattctcca-gccacacagcaacacatga 208  Q
    ||||||||||||| |||||||  |||||||| |||||   ||| |||| || |||||||||||||||||||    
T  17269168 ttttgttgccttgatcattgtgtataatctcaactctaccgtg-ttcttcatgccacacagcaacacatga 17269237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 75 - 211
Target Start/End: Original strand, 8602738 - 8602874
Alignment:
Q  75 tgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgttgttttgttgccttgttcattgtaaataatctccactc 174  Q
    ||||| || ||||||| ||| |||||||||| ||| ||||||||||||||||||||||| || ||| |||| ||||| ||||||| |||||||||  | |    
T  8602738 tgatttttggcagcatcaccgatcaaccttttatcatcagtaaaagcaacaaaagaaggagtagttctgtttccttgatcattgtgaataatctctgccc 8602837  T
Q  175 tgttgtgattctccagccacacagcaacacatgaata 211  Q
    ||||||  |  ||| |||| ||||| |||||||||||    
T  8602838 tgttgttttggtcctgccaaacagctacacatgaata 8602874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 8591411 - 8591496
Alignment:
Q  84 gcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgttgttttgttgccttgttcattgtaaataatctc 169  Q
    ||||||| |||||||||||||||||| | ||||||||||||||||||||||||  || | || ||||| ||||||| |||||||||    
T  8591411 gcagcatcaccaatcaacctttgatcattagtaaaagcaacaaaagaaggtgtaattctatttccttgatcattgtgaataatctc 8591496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 8582661 - 8582751
Alignment:
Q  69 gcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgttgttttgttgccttgttcattgt 159  Q
    |||| |||||| || ||||||| ||||||||| ||||||   | ||||||||||||| ||||||||||||||||||| ||||| |||||||    
T  8582661 gcagcttgatttttggcagcatcaccaatcaatctttgagaattagtaaaagcaacacaagaaggtgttgttttgtttccttgatcattgt 8582751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 211
Target Start/End: Original strand, 8610662 - 8610804
Alignment:
Q  69 gcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgttgttttgttgccttgttcattgtaaataatct 168  Q
    |||| |||||| |||||||||| ||| ||||||||||||||  |||  ||||||||||||||||| || ||| |||| ||||| ||||| |  || ||||    
T  8610662 gcagcttgatttttagcagcatcacctatcaacctttgatcaccagagaaagcaacaaaagaaggagtggttctgtttccttgctcattatggattatct 8610761  T
Q  169 ccactctgttgtgattctccagccacacagcaacacatgaata 211  Q
    |  |||||||||  |  ||| |||| |||||||||||||||||    
T  8610762 cagctctgttgttttgttcctgccatacagcaacacatgaata 8610804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 8635588 - 8635513
Alignment:
Q  84 gcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgttgttttgttgccttgttcattgt 159  Q
    ||||||| |||||||||||||||  ||||||| ||||||||| ||||||||||  || |||| ||||| |||||||    
T  8635588 gcagcatcaccaatcaacctttgtgcgtcagtgaaagcaacacaagaaggtgtgattctgttcccttgctcattgt 8635513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 172
Target Start/End: Original strand, 8546721 - 8546776
Alignment:
Q  117 aaagcaacaaaagaaggtgttgttttgttgccttgttcattgtaaataatctccac 172  Q
    ||||||||| ||||||||||||||||||| ||||| ||||||| ||| || |||||    
T  8546721 aaagcaacacaagaaggtgttgttttgtttccttgatcattgtgaatgatttccac 8546776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 157
Target Start/End: Original strand, 8104069 - 8104151
Alignment:
Q  75 tgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgttgttttgttgccttgttcatt 157  Q
    |||||||||||||||| ||| |||||||||| |   ||||| ||||||||| |||| ||||| ||| |||| ||||| |||||    
T  8104069 tgattcttagcagcatcaccgatcaacctttcactatcagtgaaagcaacataagacggtgtcgttctgttcccttgatcatt 8104151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 159
Target Start/End: Complemental strand, 29577087 - 29577003
Alignment:
Q  75 tgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgttgttttgttgccttgttcattgt 159  Q
    ||||| ||||||||||||||||| |||||| |    ||||| ||||| |||| ||||||||| ||| | |||||||| |||||||    
T  29577087 tgatttttagcagcattaccaattaaccttagtgaatcagtgaaagctacaacagaaggtgtggttctattgccttgatcattgt 29577003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 211
Target Start/End: Complemental strand, 29581263 - 29581127
Alignment:
Q  75 tgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgttgttttgttgccttgttcattgtaaataatctccactc 174  Q
    ||||| ||||||||||||| |||||||||  |   |||||| ||||| |||| ||||||||| |||   |||||||| |||||||  || |||||  |||    
T  29581263 tgatttttagcagcattactaatcaacctcagtgagtcagtgaaagctacaacagaaggtgtggttccattgccttgatcattgtggatgatctcagctc 29581164  T
Q  175 tgttgtgattctccagccacacagcaacacatgaata 211  Q
     ||||  ||||||| |||| || || |||||||||||    
T  29581163 ggttgatattctcctgccaaactgctacacatgaata 29581127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 2e-42; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 24 - 211
Target Start/End: Complemental strand, 9323213 - 9323026
Alignment:
Q  24 aatagaaatagatatttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaa 123  Q
    |||||||||||| |||||||||||| ||||||||||| ||| || |||||||||||||||||||||| ||||||||||||||| || |   | |||||||    
T  9323213 aatagaaatagaaatttaccaaagatagtgttttcagggttagtagcagattgattcttagcagcatcaccaatcaacctttgctcattgttgaaagcaa 9323114  T
Q  124 caaaagaaggtgttgttttgttgccttgttcattgtaaataatctccactctgttgtgattctccagccacacagcaacacatgaata 211  Q
    |||||||||||||||||  ||| ||||| ||||||| ||||||||| ||||| | ||| |  || ||||||||||||||||| |||||    
T  9323113 caaaagaaggtgttgttcggtttccttgatcattgtgaataatctcaactctttggtgttgatcaagccacacagcaacacaagaata 9323026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 24 - 211
Target Start/End: Complemental strand, 9377692 - 9377505
Alignment:
Q  24 aatagaaatagatatttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaa 123  Q
    |||||||||||| |||||||||||| ||||||||||| ||| || |||||||||||||||||||||| ||||||||||||||| || |   | |||||||    
T  9377692 aatagaaatagaaatttaccaaagatagtgttttcagggttagtagcagattgattcttagcagcatcaccaatcaacctttgctcattgttgaaagcaa 9377593  T
Q  124 caaaagaaggtgttgttttgttgccttgttcattgtaaataatctccactctgttgtgattctccagccacacagcaacacatgaata 211  Q
    |||||||||||||||||  ||| ||||| ||||||| ||||||||| ||||| | ||| |  || ||||||||||||||||| |||||    
T  9377592 caaaagaaggtgttgttcggtttccttgatcattgtgaataatctcaactctttggtgttgatcaagccacacagcaacacaagaata 9377505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 211
Target Start/End: Complemental strand, 9335184 - 9334998
Alignment:
Q  24 aatagaaatagatatttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaa 123  Q
    |||||||||||| |||||||||||| ||||||||||| ||| || |||||||||||||||||||||| ||| ||||||||||| || |   | |||||||    
T  9335184 aatagaaatagaaatttaccaaagatagtgttttcagggttagtagcagattgattcttagcagcatcacc-atcaacctttgctcattgttgaaagcaa 9335086  T
Q  124 caaaagaaggtgttgttttgttgccttgttcattgtaaataatctccactctgttgtgattctccagccacacagcaacacatgaata 211  Q
    |||||||||||||||||  ||| ||||| ||||||| ||||||||| ||||| | ||| |  || ||||||||||||||||| |||||    
T  9335085 caaaagaaggtgttgttcggtttccttgatcattgtgaataatctcaactctttggtgttgatcaagccacacagcaacacaagaata 9334998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 35133422 - 35133530
Alignment:
Q  39 ttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgttg 138  Q
    |||||||| |||||||||||| | ||||  |||| ||||||||||||||||| ||| |||||||||||||| | ||| ||||||| | ||||||||||||    
T  35133422 ttaccaaatacagtgttttcaaaattggcagcagcttgattcttagcagcatcaccgatcaacctttgatccttagtgaaagcaatacaagaaggtgttg 35133521  T
Q  139 ttttgttgc 147  Q
    |||||||||    
T  35133522 ttttgttgc 35133530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 30776067 - 30776251
Alignment:
Q  21 gagaatagaaatagatatttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaag 120  Q
    |||||||| |||||| ||||||||||||||||||||| || |||| | ||||  || | ||||||||||  ||| | |||||||||| | ||||| ||||    
T  30776067 gagaatagcaatagaaatttaccaaagacagtgttttgagggttgatagcagcctggtccttagcagcagcaccgaccaacctttgaccatcagtgaaag 30776166  T
Q  121 caacaaaagaaggtgttgttttgttgccttgttcattgtaaataatctccactctgttgtgattctccagccacacagcaacaca 205  Q
    ||||||||||||||||  ||||| ||||||  || ||||  ||||| || |||||||| |  | ||||||||| ||||| |||||    
T  30776167 caacaaaagaaggtgtgattttgctgccttcatcgttgtggataatttcaactctgtttttctcctccagccaaacagccacaca 30776251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 40 - 175
Target Start/End: Complemental strand, 42554320 - 42554185
Alignment:
Q  40 taccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgttgt 139  Q
    ||||||||||||||||||  | ||||||||| | ||||| ||||||||||| |||||||||||||| ||  | |||||||||||||||||||||||||||    
T  42554320 taccaaagacagtgttttgggggttggtggcggtttgatccttagcagcatcaccaatcaacctttcatgatgagtaaaagcaacaaaagaaggtgttgt 42554221  T
Q  140 tttgttgccttgttcattgtaaataatctccactct 175  Q
    |||||||||||| ||||||| ||||||||| |||||    
T  42554220 tttgttgccttgatcattgtgaataatctcaactct 42554185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 30 - 211
Target Start/End: Original strand, 28220906 - 28221087
Alignment:
Q  30 aatagatatttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaag 129  Q
    |||||| ||||||||||||| || ||||  | |||| |||| | |||||| ||||||||||  ||||||||||||| ||| || || |||||||||||||    
T  28220906 aatagaaatttaccaaagacggtattttgggggttgttggccgtttgatttttagcagcatcgccaatcaacctttcatcatcggtgaaagcaacaaaag 28221005  T
Q  130 aaggtgttgttttgttgccttgttcattgtaaataatctccactctgttgtgattctccagccacacagcaacacatgaata 211  Q
    |||| ||||||||||||||||| ||||||| ||||||||| || || ||||| |  ||  ||||||||||||||||||||||    
T  28221006 aaggagttgttttgttgccttgatcattgtgaataatctcaaccctattgtgttcatcttgccacacagcaacacatgaata 28221087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 7e-30; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 74 - 212
Target Start/End: Complemental strand, 16656699 - 16656561
Alignment:
Q  74 ttgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgttgttttgttgccttgttcattgtaaataatctccact 173  Q
    ||||||||||||||||| ||| |||||||||||||| | ||| |||||||||||||||||||||||| |||| || || |||||||  || |||||  ||    
T  16656699 ttgattcttagcagcatcaccgatcaacctttgatcatgagtgaaagcaacaaaagaaggtgttgttctgtttccctggtcattgtgtatgatctctgct 16656600  T
Q  174 ctgttgtgattctccagccacacagcaacacatgaataa 212  Q
    |||||||||   |||| ||||||||||||||||||||||    
T  16656599 ctgttgtgacggtccatccacacagcaacacatgaataa 16656561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 12244540 - 12244428
Alignment:
Q  36 tatttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtg 135  Q
    |||||||||||||||||||||| |||||| |  |||| |||||| |||||||||| |||||| ||||||||||| ||||| ||||||||| |||||||||    
T  12244540 tatttaccaaagacagtgttttgagagttagcagcagcttgatttttagcagcatcaccaataaacctttgatcttcagtgaaagcaacacaagaaggtg 12244441  T
Q  136 ttgttttgttgcc 148  Q
    ||||| |||||||    
T  12244440 ttgttctgttgcc 12244428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 40 - 169
Target Start/End: Complemental strand, 12258047 - 12257918
Alignment:
Q  40 taccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgttgt 139  Q
    ||||||||||||||| || || |||||  |||| ||||||||||||||||| |||||||||||||||||| | ||||||||||||| ||||||| |||||    
T  12258047 taccaaagacagtgtgttgagggttggcagcagcttgattcttagcagcatcaccaatcaacctttgatctttagtaaaagcaacacaagaaggcgttgt 12257948  T
Q  140 tttgttgccttgttcattgtaaataatctc 169  Q
    | |||| ||||| || |||| ||| |||||    
T  12257947 tctgtttccttgatcgttgtgaatgatctc 12257918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 175
Target Start/End: Original strand, 43626286 - 43626424
Alignment:
Q  37 atttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgt 136  Q
    |||||||||||||||||||||| | || || || || ||||  ||||||||||| ||||||||||||||| || | ||| |||| |||||||||||||||    
T  43626286 atttaccaaagacagtgttttcggggtcggaggtagcttgacccttagcagcatcaccaatcaacctttggtccttagtgaaagaaacaaaagaaggtgt 43626385  T
Q  137 tgttttgttgccttgttcattgtaaataatctccactct 175  Q
     ||| |||| ||||| |||||||  |||||||| |||||    
T  43626386 agttctgtttccttggtcattgtggataatctctactct 43626424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 7543245 - 7543357
Alignment:
Q  39 ttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgttg 138  Q
    ||||||||||||||||||| || |||||  |||| |||||||||||||  || ||| |||||||| ||||  || || ||||||||||||||||||||||    
T  7543245 ttaccaaagacagtgttttgagggttggaagcagcttgattcttagcattatcaccgatcaacctctgattttcggtgaaagcaacaaaagaaggtgttg 7543344  T
Q  139 ttttgttgccttg 151  Q
    || ||||||||||    
T  7543345 ttctgttgccttg 7543357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 174
Target Start/End: Original strand, 12235766 - 12235901
Alignment:
Q  39 ttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgttg 138  Q
    ||||||||||| |||||||  | |||||  |||| ||||||||||||||||| |||||||||||| ||||  || || ||||||||||||||||| ||||    
T  12235766 ttaccaaagacggtgttttgcgggttggaagcagcttgattcttagcagcatcaccaatcaacctctgattttcggtgaaagcaacaaaagaaggggttg 12235865  T
Q  139 ttttgttgccttgttcattgtaaataatctccactc 174  Q
    || | |||||||| || |||| ||| ||||| ||||    
T  12235866 ttctattgccttgatcgttgtgaatgatctcaactc 12235901  T

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Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 208
Target Start/End: Complemental strand, 16661209 - 16661031
Alignment:
Q  30 aatagatatttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaag 129  Q
    |||||| || || ||||||| |||||||  | |||| | |||| ||||| ||||||||||  ||| | |||||||||| | |||||||||||||||||||    
T  16661209 aatagaaatatagcaaagacggtgttttgtgggttgatagcagcttgatccttagcagcaccaccgaccaacctttgagcatcagtaaaagcaacaaaag 16661110  T
Q  130 aaggtgttgttttgttgccttgttcattgtaaataatctccactctgttgtgattctccagccacacagcaacacatga 208  Q
    |||||||  ||||||||||||  || ||||  |||||||| |||||||| |  |  |||| ||| ||||||||||||||    
T  16661109 aaggtgtaattttgttgccttcatcgttgtggataatctcaactctgtttttctcttccaaccaaacagcaacacatga 16661031  T

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Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 12000301 - 12000413
Alignment:
Q  39 ttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgttg 138  Q
    |||||||| |||||||||| ||||||||  || | ||| || |||||||||| |||||  ||||||||||  ||||| ||||||||| |||||||||||     
T  12000301 ttaccaaaaacagtgttttgagagttggcagcggcttggtttttagcagcatcaccaacaaacctttgattttcagtgaaagcaacacaagaaggtgtta 12000400  T
Q  139 ttttgttgccttg 151  Q
    |||||||||||||    
T  12000401 ttttgttgccttg 12000413  T

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Target: chr2; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 14705432 - 14705543
Alignment:
Q  40 taccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgttgt 139  Q
    |||||||||||||||||  || |||||  |||| ||||||||||||||||| |||||||||||  ||||  || || ||||||||||||||||| |||||    
T  14705432 taccaaagacagtgtttcgagggttggcagcagcttgattcttagcagcatcaccaatcaaccgctgattttcggtgaaagcaacaaaagaaggagttgt 14705531  T
Q  140 tttgttgccttg 151  Q
    | | ||||||||    
T  14705532 tctattgccttg 14705543  T

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Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 40 - 211
Target Start/End: Original strand, 43745793 - 43745961
Alignment:
Q  40 taccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgttgt 139  Q
    |||||||||  ||||||| || ||||||||| | ||||||||||||||| | ||| |||||||||| ||  |||||||||||||||||||||   |||||    
T  43745793 taccaaagatggtgttttgagggttggtggcggtttgattcttagcagcgtcacctatcaacctttcatgatcagtaaaagcaacaaaagaa---gttgt 43745889  T
Q  140 tttgttgccttgttcattgtaaataatctccactctgttgtgattctccagccacacagcaacacatgaata 211  Q
    |||||||||||| ||||||| ||||||||| ||||| || || |  ||  |||||||||||||||| |||||    
T  43745890 tttgttgccttgatcattgtgaataatctcaactctattttgttcatcttgccacacagcaacacacgaata 43745961  T

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Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 172
Target Start/End: Original strand, 12529871 - 12529969
Alignment:
Q  74 ttgattcttagcagcattaccaatcaacctttgatcgtcagtaaaagcaacaaaagaaggtgttgttttgttgccttgttcattgtaaataatctccac 172  Q
    |||||| || ||||||| ||||||||| || |||   | ||||||||||||| ||||||||||||||||||| ||||| ||||||| ||| || |||||    
T  12529871 ttgatttttggcagcatgaccaatcaatctctgagaattagtaaaagcaacacaagaaggtgttgttttgtttccttgatcattgtgaattatttccac 12529969  T

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Target: chr6 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 28911272 - 28911352
Alignment:
Q  29 aaatagatatttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatc 109  Q
    ||||||| || |||| || ||||||||||| | |||||||||||  |||||||||||||||| ||||||||||||||||||    
T  28911272 aaatagaaatatacctaaaacagtgttttcggggttggtggcagcctgattcttagcagcatcaccaatcaacctttgatc 28911352  T

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