View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8019_low_21 (Length: 270)

Name: NF8019_low_21
Description: NF8019
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8019_low_21
NF8019_low_21
[»] chr7 (3 HSPs)
chr7 (30-252)||(4581336-4581558)
chr7 (30-252)||(518926-519145)
chr7 (30-252)||(45296920-45297146)
[»] chr5 (3 HSPs)
chr5 (30-252)||(670160-670382)
chr5 (30-252)||(10642956-10643178)
chr5 (30-252)||(2850631-2850853)
[»] chr3 (2 HSPs)
chr3 (30-252)||(33048373-33048595)
chr3 (30-67)||(50901581-50901618)
[»] chr2 (2 HSPs)
chr2 (30-252)||(9303346-9303568)
chr2 (31-171)||(12391143-12391283)
[»] chr6 (3 HSPs)
chr6 (30-252)||(2524391-2524613)
chr6 (30-252)||(30593175-30593389)
chr6 (30-252)||(25086468-25086689)
[»] chr1 (1 HSPs)
chr1 (30-252)||(50580216-50580438)
[»] chr4 (2 HSPs)
chr4 (30-250)||(49317836-49318056)
chr4 (30-252)||(36667482-36667704)
[»] chr8 (2 HSPs)
chr8 (30-252)||(4598591-4598812)
chr8 (93-251)||(10990754-10990912)


Alignment Details
Target: chr7 (Bit Score: 163; Significance: 4e-87; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 30 - 252
Target Start/End: Complemental strand, 4581558 - 4581336
Alignment:
Q  30 cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  4581558 cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaattttttttcactacacaaccttactattatcggattagctgaatataact 4581459  T
Q  130 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||    
T  4581458 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttaaaaaaataaaataatttaccatgagaacagaaatatacaaataaa 4581359  T
Q  230 attttgcataaaatagctacagc 252  Q
    |||||||||||||||||||||||    
T  4581358 attttgcataaaatagctacagc 4581336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 518926 - 519145
Alignment:
Q  30 cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact 129  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  518926 cacagttaattcacctatccatgtcttgt---gtaaaatcttgaccagaattttttttcactacacaaccttactattatcggattagctgaatataact 519022  T
Q  130 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||    
T  519023 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttaaaaaaataaaataatttaccatgagaacagaaatatacaaataaa 519122  T
Q  230 attttgcataaaatagctacagc 252  Q
    |||||||||||||||||||||||    
T  519123 attttgcataaaatagctacagc 519145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 45296920 - 45297146
Alignment:
Q  30 cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |         ||||||||||||||||||||||||||||||||||||||||||    
T  45296920 cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccaaatttttttttcactacacaaccttactattatcggattagctgaatataact 45297019  T
Q  130 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagtttt----nnnnnnnnnnnntaatttaccatgagaacagaaatatacaaa 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||                 |||||||||||||||||||||||||||||    
T  45297020 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttaaaaaaaaaaaaaaaaaaatttaccatgagaacagaaatatacaaa 45297119  T
Q  226 taaaattttgcataaaatagctacagc 252  Q
    |||||||||||||||||||||||||||    
T  45297120 taaaattttgcataaaatagctacagc 45297146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 163; Significance: 4e-87; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 670160 - 670382
Alignment:
Q  30 cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  670160 cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaattttttttcactacacaaccttactattatcggattagctgaatataact 670259  T
Q  130 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||    
T  670260 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttaaaaaaataaaataatttaccatgagaacagaaatatacaaataaa 670359  T
Q  230 attttgcataaaatagctacagc 252  Q
    |||||||||||||||||||||||    
T  670360 attttgcataaaatagctacagc 670382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 10642956 - 10643178
Alignment:
Q  30 cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  10642956 cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaattttttttcactacacaaccttactattatcggattagctgaatataact 10643055  T
Q  130 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||    
T  10643056 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttaaaaaaataaaataatttaccatgagaacagaaatatacaaataaa 10643155  T
Q  230 attttgcataaaatagctacagc 252  Q
    |||||||||||||||||||||||    
T  10643156 attttgcataaaatagctacagc 10643178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 30 - 252
Target Start/End: Complemental strand, 2850853 - 2850631
Alignment:
Q  30 cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact 129  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  2850853 cacagttaattcacctatccatgttttgttgtgtaaaatcttgaccagaattttttttcactacacaaccttactattatcggattagctgaatataact 2850754  T
Q  130 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||    
T  2850753 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttaaaaaaataaaataatttaccatgagaacagaaatatacaaataaa 2850654  T
Q  230 attttgcataaaatagctacagc 252  Q
    |||||||||||||||||||||||    
T  2850653 attttgcataaaatagctacagc 2850631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 163; Significance: 4e-87; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 33048373 - 33048595
Alignment:
Q  30 cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  33048373 cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaattttttttcactacacaaccttactattatcggattagctgaatataact 33048472  T
Q  130 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||    
T  33048473 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttaaaaaaataaaataatttaccatgagaacagaaatatacaaataaa 33048572  T
Q  230 attttgcataaaatagctacagc 252  Q
    |||||||||||||||||||||||    
T  33048573 attttgcataaaatagctacagc 33048595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 50901618 - 50901581
Alignment:
Q  30 cacagttaattcacctatccatgtcttgttgtgtaaaa 67  Q
    ||||||||||||||||||||||||||||||||||||||    
T  50901618 cacagttaattcacctatccatgtcttgttgtgtaaaa 50901581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 163; Significance: 4e-87; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 9303346 - 9303568
Alignment:
Q  30 cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  9303346 cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaattttttttcactacacaaccttactattatcggattagctgaatataact 9303445  T
Q  130 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||    
T  9303446 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttaaaaaaataaaataatttaccatgagaacagaaatatacaaataaa 9303545  T
Q  230 attttgcataaaatagctacagc 252  Q
    |||||||||||||||||||||||    
T  9303546 attttgcataaaatagctacagc 9303568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 31 - 171
Target Start/End: Complemental strand, 12391283 - 12391143
Alignment:
Q  31 acagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataactc 130  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||    
T  12391283 acagttaattcacctatcaatgtcttgttgtgtaaaatcttgaccagaattttttttcactacacaaccttactattatcggattagctgaatataactc 12391184  T
Q  131 gtaatcattgaatcaaattgaaaatgaaattcactaaaaac 171  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  12391183 gtaatcattaaatcaaattgaaaatgaaattcactaaaaac 12391143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 159; Significance: 1e-84; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 2524391 - 2524613
Alignment:
Q  30 cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact 129  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  2524391 cacagttaattcgcctatccatgtcttgttgtgtaaaatcttgaccagaattttttttcactacacaaccttactattatcggattagctgaatataact 2524490  T
Q  130 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||    
T  2524491 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttaaaaaaataaaataatttaccatgagaacagaaatatacaaataaa 2524590  T
Q  230 attttgcataaaatagctacagc 252  Q
    |||||||||||||||||||||||    
T  2524591 attttgcataaaatagctacagc 2524613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 30593175 - 30593389
Alignment:
Q  30 cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  30593175 cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaattttttttcactacacaaccttactattatcggattagctgaatataact 30593274  T
Q  130 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||    
T  30593275 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagtttt--------aaaataatttaccatgagaacagaaatatacaaataaa 30593366  T
Q  230 attttgcataaaatagctacagc 252  Q
    |||||||||||||||||||||||    
T  30593367 attttgcataaaatagctacagc 30593389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 30 - 252
Target Start/End: Complemental strand, 25086689 - 25086468
Alignment:
Q  30 cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact 129  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  25086689 cacagttaattcacatatccatgtcttgttgtgtaaaatcttgaccagaattttttttcactacacaaccttactattatcggattagctgaatataact 25086590  T
Q  130 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||    
T  25086589 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagtttt-aaaaaaaaaaataatttaccatgagaacagaaatatacaaataaa 25086491  T
Q  230 attttgcataaaatagctacagc 252  Q
    |||||||||||||||||||||||    
T  25086490 attttgcataaaatagctacagc 25086468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 50580216 - 50580438
Alignment:
Q  30 cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||        ||||||||||||||||||||||||||||||||||||||||||    
T  50580216 cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccaaaattttttttcactacacaaccttactattatcggattagctgaatataact 50580315  T
Q  130 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||    
T  50580316 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttaaaaaaataaaataatttaccatgagaacagaaatatacaaataaa 50580415  T
Q  230 attttgcataaaatagctacagc 252  Q
    |||||||||||||||||||||||    
T  50580416 attttgcataaaatagctacagc 50580438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 157; Significance: 2e-83; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 30 - 250
Target Start/End: Complemental strand, 49318056 - 49317836
Alignment:
Q  30 cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  49318056 cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaattttttttcactacacaaccttactattatcggattagctgaatataact 49317957  T
Q  130 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||    
T  49317956 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttaaaaaaataaaataatttaccatgagaacagaaatatacaaataaa 49317857  T
Q  230 attttgcataaaatagctaca 250  Q
    | |||||||||||||||||||    
T  49317856 actttgcataaaatagctaca 49317836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 30 - 252
Target Start/End: Complemental strand, 36667704 - 36667482
Alignment:
Q  30 cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact 129  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||        ||||||||||||||||||||||||||||||||||||||||||    
T  36667704 cacaattaattcacctatccatgtcttgttgtgtaaaatcttgaccataattttttttcactacacaaccttactattatcggattagctgaatataact 36667605  T
Q  130 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||    
T  36667604 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttaaaaaaataaaataatttaccatgagaacagaaatatacaaataaa 36667505  T
Q  230 attttgcataaaatagctacagc 252  Q
    |||||||||||||||||||||||    
T  36667504 attttgcataaaatagctacagc 36667482  T

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Target: chr8 (Bit Score: 151; Significance: 6e-80; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 30 - 252
Target Start/End: Complemental strand, 4598812 - 4598591
Alignment:
Q  30 cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  4598812 cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaattttttttcactacacaaccttactattatcggattagctgaatataact 4598713  T
Q  130 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||             ||||||||||||||||| |||||||||||||||    
T  4598712 cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttaaaaaaaaaaaa-aatttaccatgagaacaaaaatatacaaataaa 4598614  T
Q  230 attttgcataaaatagctacagc 252  Q
    |||||||||||||||||||||||    
T  4598613 attttgcataaaatagctacagc 4598591  T

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Target: chr8; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 93 - 251
Target Start/End: Complemental strand, 10990912 - 10990754
Alignment:
Q  93 cacaaccttactattatcggattagctgaatataactcgtaatcattgaatcaaattgaaaatgaaattcactaaaaac-gcacatagttttnnnnnnnn 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||            
T  10990912 cacaaccttactattatcggattagctgaatataactcgtaatcattgaatcaaattgaaaatgaaattcactaaaaacggcacatagtttt-aaaaaat 10990814  T
Q  192 nnnntaatttaccatgagaacagaaatatacaaataaaattttgcataaaatagctacag 251  Q
        ||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  10990813 aaaataatttaccatgagaacagaaatatacaaatcaaaatttgcataaaatatctacag 10990754  T

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