View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8020_high_24 (Length: 366)
Name: NF8020_high_24
Description: NF8020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8020_high_24 |
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Alignment Details
Target: chr7 (Bit Score: 353; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 1 - 357
Target Start/End: Complemental strand, 21826672 - 21826316
Alignment:
| Q |
1 |
tcagcatggggtttggtaatagtaacagcgggatttggaggtgaaataagatgttatcagaattttggattgccaagaaggatgggtaggcaagctcatc |
100 |
Q |
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| T |
21826672 |
tcagcatggggtttggtaatagtaacagcgggatttggaggtgaaataagatgttatcagaattttggattgccaagaaggatgggtaggcaagctcatc |
21826573 |
T |
|
| Q |
101 |
tttttggaagccctgcttaacattttgtaaaattaaaattagtaactttttccatatgaaagagcaagaaatggcacaggttaaatgtaaattgagtttt |
200 |
Q |
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| T |
21826572 |
tttttggaagccctgcttaacattttgtaaaattaaaattagtaactttttccatatgaaagagcaagaaatggcacaggttaaatgtaaattgagtttt |
21826473 |
T |
|
| Q |
201 |
tcttattagattggcatatcatgtgtggcaattttgatgatatgtatgcttttggttagtaagctacataaacattatagacaagatacaagaaatgtaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21826472 |
tcttattagattggcatatcatgtgtggcaattttgatgatatgtatgcttttggttagtaagctacataaacattatagacaagatacaagaaatgtaa |
21826373 |
T |
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| Q |
301 |
atgaaattcaaagtgaacaatcaaagggaaagcacgtgttcgacaccgacacatatt |
357 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
21826372 |
atgaaattcaaagtgaacaatcaaagggaaagcacgtgtccgacaccgacacatatt |
21826316 |
T |
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