View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8020_high_51 (Length: 203)
Name: NF8020_high_51
Description: NF8020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8020_high_51 |
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Alignment Details
Target: chr4 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 22362335 - 22362505
Alignment:
| Q |
17 |
atatgcatttcggaaatcaggttttctatcataaagattgtaagagtcaggggaatcagctctgtctttattctctatcttcttcttctcttttcctaat |
116 |
Q |
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| T |
22362335 |
atatgcatttcggaaatcaggttttctatcatagagattgtaagagtcaggggaatcagctctgtctttattctctatcttcttcttctcttttcctaat |
22362434 |
T |
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| Q |
117 |
acatttttcatgagctttctccatgaccaacttgtttgcttctcctcttcctcttcttcttgtctttgtac |
187 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22362435 |
acatttttcatgagcttcctccatgaccaacttgtttgcttctcctcttcctcttcttcttgtctttgtac |
22362505 |
T |
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