View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8020_low_28 (Length: 350)
Name: NF8020_low_28
Description: NF8020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8020_low_28 |
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Alignment Details
Target: chr7 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 25 - 349
Target Start/End: Complemental strand, 46914387 - 46914063
Alignment:
| Q |
25 |
ttgcttacctgatttatgattcctctggacagcttgtttgattgaacataaaggactttgtcatcatgcatttggaataactcttaaatatgtagattca |
124 |
Q |
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| T |
46914387 |
ttgcttacctgatttatgattcctctggacagcttgtttgattgaacataaaggactttgtcatcatgcatttggaataactcttaaatatgtagattca |
46914288 |
T |
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| Q |
125 |
tctatgccatacacgtgtctttctattggatcttaggggattcggagatcattacatttagttttgaacaatataaatgtgtctccctattggattgttt |
224 |
Q |
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| T |
46914287 |
tctatgccatacacgtgtctttctattggatcttaggggattcggggatcattacatttagttttgaacaatatacatgtgtctccctattggattgttt |
46914188 |
T |
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| Q |
225 |
gttaggttcatgaatcatttcatctagctttgatcaattacacaaataaattagacattacatcttaaccaaatctttaaacaattagatatatgaattt |
324 |
Q |
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|||||||||||||||||||||||| | |||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46914187 |
gttaggttcatgaatcatttcatcgaactttgatcgattacaaaaatagattagacattacatcttaaccaaatctttaaacaattagatatatgaattt |
46914088 |
T |
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| Q |
325 |
tctcacttatatattcttcgacatc |
349 |
Q |
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||||||||||||||| ||| ||||| |
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| T |
46914087 |
tctcacttatatattgttcaacatc |
46914063 |
T |
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