View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8020_low_37 (Length: 294)
Name: NF8020_low_37
Description: NF8020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8020_low_37 |
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Alignment Details
Target: chr6 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 34183417 - 34183676
Alignment:
| Q |
18 |
gaaaaatccagcagcaaaacccacaaacactagatattgagaaatagagagttataagttcgaatcagccccaagtatattaaatatttgtatatccttt |
117 |
Q |
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| T |
34183417 |
gaaaaatccagcagcaaaacccacaaacactagatattgagaaatagagagttataagttcgaatcagcccctagtatattaaatatttgtatatccttt |
34183516 |
T |
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| Q |
118 |
taccatctaagatacttaaaatataaatttttatttttatctgtatcccttaaataaatattgtgtacataaatttggactcattaaaaacaacgtataa |
217 |
Q |
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| T |
34183517 |
taccatctaagatacttaaaatataaatttttatttttatctgtatcccttaaataaatattgtatacataagtttggactcattaaaaacaacgtataa |
34183616 |
T |
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| Q |
218 |
acgaaattacaaacatgacttgaaattcacagagacaattgattgattccaactcaggtg |
277 |
Q |
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| T |
34183617 |
acgaaatgacaaacatgacttgaaattcacacagacaattgattgatttcaactcaggtg |
34183676 |
T |
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