View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8020_low_51 (Length: 217)
Name: NF8020_low_51
Description: NF8020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8020_low_51 |
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Alignment Details
Target: chr8 (Bit Score: 116; Significance: 3e-59; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 37546876 - 37546753
Alignment:
| Q |
20 |
ctcaccagaccaaatcttttcttggtaatcacatgtttttatttagaacacaaggattttataaatagtaattactccaatacatagtatttttcatctt |
119 |
Q |
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| T |
37546876 |
ctcaccagatcaaatattttcttggtaatcacatgtttttatttagaacacaaggattttataaatagtaattactccaatacatagtatttttcatctt |
37546777 |
T |
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| Q |
120 |
tggcaccttaaatacatatgttac |
143 |
Q |
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| T |
37546776 |
tggcaccttaaatacatatgttac |
37546753 |
T |
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