View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8023_low_17 (Length: 311)

Name: NF8023_low_17
Description: NF8023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8023_low_17
NF8023_low_17
[»] chr6 (70 HSPs)
chr6 (143-296)||(26805499-26805652)
chr6 (139-292)||(27590163-27590316)
chr6 (143-296)||(27681934-27682087)
chr6 (143-284)||(27715542-27715683)
chr6 (143-296)||(27608140-27608296)
chr6 (140-296)||(27695600-27695759)
chr6 (139-292)||(27674592-27674745)
chr6 (158-288)||(26952597-26952727)
chr6 (140-285)||(26887766-26887908)
chr6 (140-285)||(25491190-25491335)
chr6 (142-305)||(26851504-26851667)
chr6 (186-276)||(26826901-26826991)
chr6 (1-57)||(26805357-26805413)
chr6 (140-288)||(26962072-26962220)
chr6 (143-293)||(27074220-27074370)
chr6 (140-285)||(31287558-31287706)
chr6 (142-275)||(25547950-25548083)
chr6 (205-274)||(28789405-28789474)
chr6 (1-57)||(27590377-27590433)
chr6 (1-57)||(27695842-27695898)
chr6 (208-275)||(25486406-25486473)
chr6 (208-275)||(25513911-25513978)
chr6 (208-275)||(26058955-26059022)
chr6 (208-275)||(26078925-26078992)
chr6 (205-296)||(26659014-26659105)
chr6 (205-296)||(26764985-26765076)
chr6 (195-292)||(26061595-26061690)
chr6 (195-292)||(26081565-26081660)
chr6 (140-285)||(26638378-26638526)
chr6 (140-285)||(26744344-26744492)
chr6 (140-276)||(26876534-26876670)
chr6 (208-275)||(25582743-25582810)
chr6 (205-275)||(28795429-28795499)
chr6 (184-285)||(25077031-25077132)
chr6 (1-57)||(27674825-27674881)
chr6 (1-57)||(27681813-27681869)
chr6 (195-280)||(26626158-26626246)
chr6 (195-280)||(26732135-26732223)
chr6 (184-284)||(26649490-26649593)
chr6 (184-284)||(26755458-26755561)
chr6 (1-48)||(25513731-25513778)
chr6 (1-48)||(25547836-25547883)
chr6 (1-48)||(25582563-25582610)
chr6 (1-48)||(26058775-26058822)
chr6 (1-48)||(26078745-26078792)
chr6 (1-48)||(26145853-26145900)
chr6 (208-275)||(26146036-26146103)
chr6 (1-48)||(26649332-26649379)
chr6 (1-48)||(26755300-26755347)
chr6 (219-274)||(27528708-27528763)
chr6 (195-285)||(27662413-27662506)
chr6 (205-260)||(28246419-28246474)
chr6 (1-43)||(25491406-25491448)
chr6 (1-43)||(31287435-31287477)
chr6 (1-46)||(26886965-26887010)
chr6 (205-258)||(28142689-28142742)
chr6 (7-43)||(25485852-25485888)
chr6 (8-48)||(26952481-26952521)
chr6 (1-48)||(27601982-27602030)
chr6 (1-57)||(27662623-27662679)
chr6 (1-57)||(27715751-27715807)
chr6 (140-247)||(26808437-26808544)
chr6 (1-48)||(26851366-26851413)
chr6 (1-48)||(27608380-27608427)
chr6 (195-273)||(27657793-27657872)
chr6 (1-43)||(28795265-28795307)
chr6 (205-258)||(2170645-2170698)
chr6 (1-46)||(26638258-26638303)
chr6 (1-46)||(26744224-26744269)
chr6 (7-48)||(27658001-27658042)
[»] scaffold0349 (2 HSPs)
scaffold0349 (143-284)||(16262-16403)
scaffold0349 (1-57)||(16138-16194)
[»] chr1 (5 HSPs)
chr1 (140-296)||(265355-265511)
chr1 (1-57)||(265582-265638)
chr1 (205-288)||(26139027-26139110)
chr1 (220-277)||(28129711-28129768)
chr1 (242-277)||(28124680-28124715)
[»] chr8 (3 HSPs)
chr8 (197-296)||(29270866-29270965)
chr8 (1-48)||(29271099-29271146)
chr8 (1-43)||(22024132-22024174)
[»] chr2 (1 HSPs)
chr2 (205-280)||(17990182-17990257)
[»] chr4 (15 HSPs)
chr4 (140-301)||(18696475-18696636)
chr4 (140-301)||(18652544-18652711)
chr4 (140-301)||(18676626-18676793)
chr4 (205-301)||(18721140-18721236)
chr4 (205-296)||(18728570-18728661)
chr4 (205-301)||(18686669-18686765)
chr4 (1-48)||(18652783-18652830)
chr4 (1-48)||(18676865-18676912)
chr4 (1-48)||(18686914-18686961)
chr4 (1-48)||(18696708-18696755)
chr4 (1-48)||(18721379-18721426)
chr4 (1-43)||(18728806-18728848)
chr4 (7-48)||(18682067-18682108)
chr4 (240-301)||(18700968-18701029)
chr4 (140-200)||(18686782-18686842)
[»] scaffold0419 (2 HSPs)
scaffold0419 (205-274)||(10555-10624)
scaffold0419 (1-43)||(10391-10433)
[»] scaffold0277 (3 HSPs)
scaffold0277 (205-274)||(1759-1828)
scaffold0277 (205-274)||(10725-10794)
scaffold0277 (1-43)||(1953-1995)
[»] scaffold0038 (1 HSPs)
scaffold0038 (205-260)||(46581-46636)
[»] scaffold0286 (1 HSPs)
scaffold0286 (205-258)||(12563-12616)


Alignment Details
Target: chr6 (Bit Score: 122; Significance: 1e-62; HSPs: 70)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 143 - 296
Target Start/End: Original strand, 26805499 - 26805652
Alignment:
Q  143 aacagcaactacatgaggctcgatggacctatttttatttcccaaacagaagagagggaataccagattggtttgagcaccaaagcaggggacccacaat 242  Q
    ||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||| |||||||||||||||||||||||||||| ||||||||||||    
T  26805499 aacagcaactacatgaggctcaatggacctattttgttttcccaaacggaacagaggggataccagattggtttgagcaccaaagcaagggacccacaat 26805598  T
Q  243 ttctttctggtttcgtaaagaaatcccttctataacttgtatttttattcttcc 296  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26805599 ttctttctggtttcgtaaagaaatcccttctataacatgtatttttattcttcc 26805652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 139 - 292
Target Start/End: Complemental strand, 27590316 - 27590163
Alignment:
Q  139 cactaacagcaactacatgaggctcgatggacctatttttatttcccaaacagaagagagggaataccagattggtttgagcaccaaagcaggggaccca 238  Q
    ||||||||| ||||||||||||||||||| || |||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||  ||    
T  27590316 cactaacaggaactacatgaggctcgatgcacttatttttatttcccaaacggaacagaggggataccagattggtttgagcaccaaagcaggggagaca 27590217  T
Q  239 caatttctttctggtttcgtaaagaaatcccttctataacttgtatttttattc 292  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||| |||||    
T  27590216 caatttctttctggtttcgtaaagaaatcccttctatgacttatatttgtattc 27590163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 143 - 296
Target Start/End: Original strand, 27681934 - 27682087
Alignment:
Q  143 aacagcaactacatgaggctcgatggacctatttttatttcccaaacagaagagagggaataccagattggtttgagcaccaaagcaggggacccacaat 242  Q
    ||||| |||||||||||||  |||| ||| |  |||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  27681934 aacagaaactacatgaggcgggatgcaccaagatttatttcccaaatggaagagaggggataccagattggtttgagcaccaaagcaggggacccataat 27682033  T
Q  243 ttctttctggtttcgtaaagaaatcccttctataacttgtatttttattcttcc 296  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  27682034 ttctttctggtttcgtaaagaaatcccttcaataacttgtatatttattcttcc 27682087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 143 - 284
Target Start/End: Complemental strand, 27715683 - 27715542
Alignment:
Q  143 aacagcaactacatgaggctcgatggacctatttttatttcccaaacagaagagagggaataccagattggtttgagcaccaaagcaggggacccacaat 242  Q
    ||||| |||||||| ||||| |||| |||||| || | ||||||||| ||| ||| || |||||||||||||||||||||||||||||||||||||||||    
T  27715683 aacagaaactacatcaggctggatgcacctatattaaattcccaaacggaacagatgggataccagattggtttgagcaccaaagcaggggacccacaat 27715584  T
Q  243 ttctttctggtttcgtaaagaaatcccttctataacttgtat 284  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  27715583 ttctttctggtttcgtaaagaaatcccttctataacttgtat 27715542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 143 - 296
Target Start/End: Complemental strand, 27608296 - 27608140
Alignment:
Q  143 aacagcaactacatgaggctcgatggacctatttttatttcccaaacagaagagag---ggaataccagattggtttgagcaccaaagcaggggacccac 239  Q
    ||||| |||||||||||||| |||| ||||||||| | ||||||||| ||| ||||   || |||||||||||||||||||||||||||||||||| |||    
T  27608296 aacagaaactacatgaggctggatgcacctattttgaattcccaaacggaacagagcaggggataccagattggtttgagcaccaaagcaggggactcac 27608197  T
Q  240 aatttctttctggtttcgtaaagaaatcccttctataacttgtatttttattcttcc 296  Q
    | ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  27608196 actttctttctggtttcgtaaagaaatcccttcaataacttgtatatttattcttcc 27608140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 140 - 296
Target Start/End: Complemental strand, 27695759 - 27695600
Alignment:
Q  140 actaacagcaactacatgaggctcgatggacctatttttatttcccaaacagaagagag---ggaataccagattggtttgagcaccaaagcaggggacc 236  Q
    |||||||||||||||||||||||||||| ||   |||| ||||||||||| ||| ||||   || |||||||||||||||||||||||||||||||||      
T  27695759 actaacagcaactacatgaggctcgatgcactcgttttgatttcccaaacggaacagagctggggataccagattggtttgagcaccaaagcaggggaga 27695660  T
Q  237 cacaatttctttctggtttcgtaaagaaatcccttctataacttgtatttttattcttcc 296  Q
    |||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  27695659 cacaatttctttttggtttcataaagaaatcccttctatatcttgtatttttattcttcc 27695600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 139 - 292
Target Start/End: Complemental strand, 27674745 - 27674592
Alignment:
Q  139 cactaacagcaactacatgaggctcgatggacctatttttatttcccaaacagaagagagggaataccagattggtttgagcaccaaagcaggggaccca 238  Q
    ||||||||| ||||||||||||||||||| ||   ||||  ||||||||||  || |||||| |||||||||||||||||||||||||||||||||  ||    
T  27674745 cactaacaggaactacatgaggctcgatgcactcgttttcttttcccaaacgaaaaagaggggataccagattggtttgagcaccaaagcaggggagaca 27674646  T
Q  239 caatttctttctggtttcgtaaagaaatcccttctataacttgtatttttattc 292  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||| |||||    
T  27674645 caatttctttctggtttcgtaaagaaatcccttctatgacttatatttgtattc 27674592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 158 - 288
Target Start/End: Original strand, 26952597 - 26952727
Alignment:
Q  158 aggctcgatggacctatttttatttcccaaacagaagagagggaataccagattggtttgagcaccaaagcaggggacccacaatttctttctggtttcg 257  Q
    ||||| |||| |||||| || |||||||||||| || |||||| || |||||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  26952597 aggctggatgcacctatattcatttcccaaacaaaacagaggggattccagattggtttgagcaccaaaccaggggagacacaatttctttctggtttcg 26952696  T
Q  258 taaagaaatcccttctataacttgtattttt 288  Q
    || | | ||||||||||||||||||||||||    
T  26952697 tagaaagatcccttctataacttgtattttt 26952727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 140 - 285
Target Start/End: Original strand, 26887766 - 26887908
Alignment:
Q  140 actaacagcaactacatgaggctcgatggacctatttttatttcccaaacagaagagagggaataccagattggtttgagcaccaaagcaggggacccac 239  Q
    |||||||| ||||| |||||||| |||| ||  | |||  |||||||||| |||||||||| || ||||||||||||||||||||||||||||||| |||    
T  26887766 actaacagaaactatatgaggctggatgcacagagtttcttttcccaaacggaagagaggggattccagattggtttgagcaccaaagcaggggacacac 26887865  T
Q  240 aatttctttctggtttcgtaaagaaatcccttctataacttgtatt 285  Q
    | |||||||||||||||||||||| |||   |||||||||||||||    
T  26887866 actttctttctggtttcgtaaagagatc---tctataacttgtatt 26887908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 140 - 285
Target Start/End: Complemental strand, 25491335 - 25491190
Alignment:
Q  140 actaacagcaactacatgaggctcgatggacctatttttatttcccaaacagaagagagggaataccagattggtttgagcaccaaagcaggggacccac 239  Q
    |||||||||||||||| |||||| |||| ||| |  ||| ||| ||||||| ||| |||||||| ||||||||||| ||||||||||  |||||||  ||    
T  25491335 actaacagcaactacacgaggctggatgcaccgagatttgtttgccaaacacaagtgagggaattccagattggttcgagcaccaaattaggggacggac 25491236  T
Q  240 aatttctttctggtttcgtaaagaaatcccttctataacttgtatt 285  Q
    |||||||||||||||| |||||||||||||||| |||| |||||||    
T  25491235 aatttctttctggttttgtaaagaaatcccttcaataagttgtatt 25491190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 142 - 305
Target Start/End: Original strand, 26851504 - 26851667
Alignment:
Q  142 taacagcaactacatgaggctcgatggacctatttttatttcccaaacagaagagagggaataccagattggtttgagcaccaaagcaggggacccacaa 241  Q
    ||||||||||||||||| ||| |||| ||| || ||  ||| |||| | ||| ||| || || ||||||||||| |||||||||||||||| |  |||||    
T  26851504 taacagcaactacatgacgctggatgtaccaatattattttgccaagcggaacagaagggattccagattggttcgagcaccaaagcagggaaaacacaa 26851603  T
Q  242 tttctttctggtttcgtaaagaaatcccttctataacttgtatttttattcttcctgatgatgt 305  Q
    |||| ||||||||||||||| | |||||||||||||| |||||| ||||| |||| ||| ||||    
T  26851604 tttccttctggtttcgtaaaaagatcccttctataacatgtattattattgttccggattatgt 26851667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 186 - 276
Target Start/End: Original strand, 26826901 - 26826991
Alignment:
Q  186 aaacagaagagagggaataccagattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgtaaagaaatcccttctata 276  Q
    ||||| ||| ||||| || |||||| ||||||||||||||||||| |||  ||||||||||||||||||||||||| ||||||||||||||    
T  26826901 aaacaaaagtgaggggattccagatcggtttgagcaccaaagcagaggagacacaatttctttctggtttcgtaaaaaaatcccttctata 26826991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 26805357 - 26805413
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgttttctattgcac 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26805357 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgttttttattgcac 26805413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 288
Target Start/End: Original strand, 26962072 - 26962220
Alignment:
Q  140 actaacagcaactacatgaggctcgatggacctatttttatttcccaaacagaagagagggaataccagattggtttgagcaccaaagcaggggacccac 239  Q
    |||||||| | |||||||||||| |||| ||| |  ||  |||||||||| |||| ||||| || ||||||||||||||||||||||| | ||||  |||    
T  26962072 actaacaggacctacatgaggctggatgcaccaagattagtttcccaaacggaagtgaggggattccagattggtttgagcaccaaagaaagggagacac 26962171  T
Q  240 aatttctttctggtttcgtaaagaaatcccttctataacttgtattttt 288  Q
    | |||||||||||| ||| ||| | |||||| ||||||| |||||||||    
T  26962172 attttctttctggtatcgcaaaaagatccctactataacatgtattttt 26962220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 293
Target Start/End: Original strand, 27074220 - 27074370
Alignment:
Q  143 aacagcaactacatgaggctcgatggacctatttttatttcccaaacagaagagagggaataccagattggtttgagcaccaaagcaggggacccacaat 242  Q
    ||||| |||||||||||||| |||| ||||   ||  ||||||||| ||||| ||||  || ||||||||||||||||||| ||||| ||||    ||||    
T  27074220 aacaggaactacatgaggctggatgcacctggattagtttcccaaatagaagtgaggagattccagattggtttgagcaccgaagcatgggaaatgcaat 27074319  T
Q  243 ttctttctggtttcgtaaagaaatcccttctataacttgtatttttattct 293  Q
    |||||| |||||| ||||||| |||||| ||||||| ||||||||| ||||    
T  27074320 ttctttttggtttagtaaagagatccctactataacatgtatttttcttct 27074370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 285
Target Start/End: Original strand, 31287558 - 31287706
Alignment:
Q  140 actaacagcaactacatgaggctcgatggacctatttttatttcccaaacagaagagagggaataccagattggtttgagcaccaaagcaggggac---c 236  Q
    |||||||| |||||||||||||| || | ||  | ||||||||||||||  ||| ||| || || ||| |||||||||||||||||| ||||||||        
T  31287558 actaacagaaactacatgaggctggaggcactgaattttatttcccaaatggaacagatgggattccaaattggtttgagcaccaaatcaggggacaaag 31287657  T
Q  237 cacaatttctttctggtttcgtaaagaaatcccttctataacttgtatt 285  Q
    ||||||| ||||||||||||||||| | ||||||||||| |||| ||||    
T  31287658 cacaattactttctggtttcgtaaaaagatcccttctattacttatatt 31287706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 275
Target Start/End: Original strand, 25547950 - 25548083
Alignment:
Q  142 taacagcaactacatgaggctcgatggacctatttttatttcccaaacagaagagagggaataccagattggtttgagcaccaaagcaggggacccacaa 241  Q
    |||||| ||||||||||  || |||| ||| ||||| | |||||||||| || |||  | || || |||||||||||||||||||||||||||   ||||    
T  25547950 taacagaaactacatgaatctggatgcacccattttcaattcccaaacacaacagaaaggattcctgattggtttgagcaccaaagcaggggagagacaa 25548049  T
Q  242 tttctttctggtttcgtaaagaaatcccttctat 275  Q
    ||||||||||||||  ||||||| ||||||||||    
T  25548050 tttctttctggtttgataaagaactcccttctat 25548083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 274
Target Start/End: Original strand, 28789405 - 28789474
Alignment:
Q  205 ccagattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgtaaagaaatcccttcta 274  Q
    ||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||| | ||||||||||    
T  28789405 ccagattggttcgagcaccaaagcaggggagacacaatttctttctggtttcgtaaaaagatcccttcta 28789474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 27590433 - 27590377
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgttttctattgcac 57  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  27590433 agttcatcaagtagaagaatgttaatgaatcaggtttgttgttgttttttattgcac 27590377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 27695898 - 27695842
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgttttctattgcac 57  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  27695898 agttcatcatgtagaagaatgttaatgagtcaggtttgttgttgttttttattgcac 27695842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 275
Target Start/End: Original strand, 25486406 - 25486473
Alignment:
Q  208 gattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgtaaagaaatcccttctat 275  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||  ||||||| ||||||||||    
T  25486406 gattggtttgagcaccaaagcaggggaggcacaatttctttctggtttgataaagaactcccttctat 25486473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 275
Target Start/End: Original strand, 25513911 - 25513978
Alignment:
Q  208 gattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgtaaagaaatcccttctat 275  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||| || ||||||||||||||||||    
T  25513911 gattggtttgagcaccaaagcaggggagtcacaattgctttctggtatcataaagaaatcccttctat 25513978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 275
Target Start/End: Original strand, 26058955 - 26059022
Alignment:
Q  208 gattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgtaaagaaatcccttctat 275  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||  ||||||| ||||||||||    
T  26058955 gattggtttgagcaccaaagcaggggagacacaatttctttctggtttgataaagaactcccttctat 26059022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 275
Target Start/End: Original strand, 26078925 - 26078992
Alignment:
Q  208 gattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgtaaagaaatcccttctat 275  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||  ||||||| ||||||||||    
T  26078925 gattggtttgagcaccaaagcaggggagacacaatttctttctggtttgataaagaactcccttctat 26078992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 296
Target Start/End: Original strand, 26659014 - 26659105
Alignment:
Q  205 ccagattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgtaaagaaatcccttctataacttgtatttttattcttcc 296  Q
    ||||||||||| |||||||||| ||||||||  ||| |||||||||||||||||||| | ||||||||||| | ||||||| || |||||||    
T  26659014 ccagattggttcgagcaccaaatcaggggacaaacagtttctttctggtttcgtaaaaagatcccttctattatttgtattcttcttcttcc 26659105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 296
Target Start/End: Original strand, 26764985 - 26765076
Alignment:
Q  205 ccagattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgtaaagaaatcccttctataacttgtatttttattcttcc 296  Q
    ||||||||||| |||||||||| ||||||||  ||| |||||||||||||||||||| | ||||||||||| | ||||||| || |||||||    
T  26764985 ccagattggttcgagcaccaaatcaggggacaaacagtttctttctggtttcgtaaaaagatcccttctattatttgtattcttcttcttcc 26765076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 195 - 292
Target Start/End: Original strand, 26061595 - 26061690
Alignment:
Q  195 agagggaataccagattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgtaaagaaatcccttctataacttgtatttttattc 292  Q
    |||||| || |||||||||||  ||||||||| || |||||  ||||||| |||||||||||||||| ||||||||||||||||| ||||| ||||||    
T  26061595 agaggggattccagattggttaaagcaccaaatcacgggac--acaatttttttctggtttcgtaaataaatcccttctataactagtattattattc 26061690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 195 - 292
Target Start/End: Original strand, 26081565 - 26081660
Alignment:
Q  195 agagggaataccagattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgtaaagaaatcccttctataacttgtatttttattc 292  Q
    |||||| || |||||||||||  ||||||||| || |||||  ||||||| |||||||||||||||| ||||||||||||||||| ||||| ||||||    
T  26081565 agaggggattccagattggttaaagcaccaaatcacgggac--acaatttttttctggtttcgtaaataaatcccttctataactagtattattattc 26081660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 140 - 285
Target Start/End: Original strand, 26638378 - 26638526
Alignment:
Q  140 actaacagcaactacatgaggctcgatggacctatttttatttcccaaacagaagagagggaataccagattggtttgagcaccaaagcaggggacc--- 236  Q
    |||||||| |||||||||| ||| |||| ||  || ||  ||| |||| ||||| |||||  || ||||||||||| ||||| |||||||||||||        
T  26638378 actaacagaaactacatgaagctggatgcactgatattcgttttccaaccagaacagaggagattccagattggttcgagcatcaaagcaggggacatgg 26638477  T
Q  237 cacaatttctttctggtttcgtaaagaaatcccttctataacttgtatt 285  Q
    ||||||||||||||||||||||||| | ||||||||||| |||| ||||    
T  26638478 cacaatttctttctggtttcgtaaaaagatcccttctattacttctatt 26638526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 140 - 285
Target Start/End: Original strand, 26744344 - 26744492
Alignment:
Q  140 actaacagcaactacatgaggctcgatggacctatttttatttcccaaacagaagagagggaataccagattggtttgagcaccaaagcaggggacc--- 236  Q
    |||||||| |||||||||| ||| |||| ||  || ||  ||| |||| ||||| |||||  || ||||||||||| ||||| |||||||||||||        
T  26744344 actaacagaaactacatgaagctggatgcactgatattcgttttccaaccagaacagaggagattccagattggttcgagcatcaaagcaggggacatgg 26744443  T
Q  237 cacaatttctttctggtttcgtaaagaaatcccttctataacttgtatt 285  Q
    ||||||||||||||||||||||||| | ||||||||||| |||| ||||    
T  26744444 cacaatttctttctggtttcgtaaaaagatcccttctattacttctatt 26744492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 276
Target Start/End: Original strand, 26876534 - 26876670
Alignment:
Q  140 actaacagcaactacatgaggctcgatggacctatttttatttcccaaacagaagagagggaataccagattggtttgagcaccaaagcaggggacccac 239  Q
    |||| ||| |||||||||||||| |||| |||||| ||  | |||||||| ||| |||||| || ||||| |||||  | ||||||| || |||||  ||    
T  26876534 actaccagaaactacatgaggctggatgcacctatattcttctcccaaacggaacagaggggattccagactggttccaacaccaaatcacgggacaaac 26876633  T
Q  240 aatttctttctggtttcgtaaagaaatcccttctata 276  Q
    |||||||||||||||||||||| | ||||||| ||||    
T  26876634 aatttctttctggtttcgtaaaaagatcccttttata 26876670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 275
Target Start/End: Original strand, 25582743 - 25582810
Alignment:
Q  208 gattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgtaaagaaatcccttctat 275  Q
    |||||||||||||||||||||||||||   ||||||||||||||||||  ||||||| ||||||||||    
T  25582743 gattggtttgagcaccaaagcaggggagagacaatttctttctggtttgataaagaactcccttctat 25582810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 275
Target Start/End: Original strand, 28795429 - 28795499
Alignment:
Q  205 ccagattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgtaaagaaatcccttctat 275  Q
    ||||||||||| ||||||||||||||||||  ||||||||| ||||||||| ||||| | |||||||||||    
T  28795429 ccagattggttcgagcaccaaagcaggggagacacaatttccttctggttttgtaaaaagatcccttctat 28795499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 184 - 285
Target Start/End: Original strand, 25077031 - 25077132
Alignment:
Q  184 ccaaacagaagagagggaataccagattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgtaaagaaatcccttctataacttgta 283  Q
    |||| ||||| |||||| || ||||||||||| ||||||||||    ||||  ||||||||||||||||||||| ||| | ||||||||||| |||||||    
T  25077031 ccaaccagaaaagaggggattccagattggttcgagcaccaaatggagggagacacaatttctttctggtttcgcaaaaagatcccttctattacttgta 25077130  T
Q  284 tt 285  Q
    ||    
T  25077131 tt 25077132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 27674881 - 27674825
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgttttctattgcac 57  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  27674881 agttcctcatgtagaagaatgttaatgagtcaggttagttgttgttttttattgcac 27674825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 27681813 - 27681869
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgttttctattgcac 57  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||| ||| ||||    
T  27681813 agttcctcaagtagaagaatgttaatgagtcaggttagttgttgttttatatagcac 27681869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 280
Target Start/End: Original strand, 26626158 - 26626246
Alignment:
Q  195 agagggaataccagattggtttgagcaccaaagcaggggaccca---caatttctttctggtttcgtaaagaaatcccttctataactt 280  Q
    |||||| || ||||||||||| ||||| |||| |||||||| ||   ||||||||||||||||||||||| | ||||||||||| ||||    
T  26626158 agaggggattccagattggttcgagcatcaaatcaggggacacaacacaatttctttctggtttcgtaaaaagatcccttctattactt 26626246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 280
Target Start/End: Original strand, 26732135 - 26732223
Alignment:
Q  195 agagggaataccagattggtttgagcaccaaagcaggggaccca---caatttctttctggtttcgtaaagaaatcccttctataactt 280  Q
    |||||| || ||||||||||| ||||| |||| |||||||| ||   ||||||||||||||||||||||| | ||||||||||| ||||    
T  26732135 agaggggattccagattggttcgagcatcaaatcaggggacacaacacaatttctttctggtttcgtaaaaagatcccttctattactt 26732223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 284
Target Start/End: Original strand, 26649490 - 26649593
Alignment:
Q  184 ccaaacagaagagagggaataccagattggtttgagcaccaaagc---aggggacccacaatttctttctggtttcgtaaagaaatcccttctataactt 280  Q
    |||||| ||| |||||| || ||||||||||| || ||||||| |   ||||||  |||||||||||| |||||||||||| | |||||||||||||| |    
T  26649490 ccaaacggaatagaggggattccagattggttcgaacaccaaatcgttaggggagacacaatttctttttggtttcgtaaaaatatcccttctataacat 26649589  T
Q  281 gtat 284  Q
    ||||    
T  26649590 gtat 26649593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 284
Target Start/End: Original strand, 26755458 - 26755561
Alignment:
Q  184 ccaaacagaagagagggaataccagattggtttgagcaccaaagc---aggggacccacaatttctttctggtttcgtaaagaaatcccttctataactt 280  Q
    |||||| ||| |||||| || ||||||||||| || ||||||| |   ||||||  |||||||||||| |||||||||||| | |||||||||||||| |    
T  26755458 ccaaacggaatagaggggattccagattggttcgaacaccaaatcgttaggggagacacaatttctttttggtttcgtaaaaatatcccttctataacat 26755557  T
Q  281 gtat 284  Q
    ||||    
T  26755558 gtat 26755561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 25513731 - 25513778
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgtttt 48  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||||    
T  25513731 agttcctcaagtataagaatgttaatgagtcaggtttgttgttttttt 25513778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 25547836 - 25547883
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgtttt 48  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||||    
T  25547836 agttcctcaagtataagaatgttaatgagtcaggtttgttgttttttt 25547883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 25582563 - 25582610
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgtttt 48  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||||    
T  25582563 agttcctcaagtataagaatgttaatgagtcaggtttgttgttttttt 25582610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 26058775 - 26058822
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgtttt 48  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||||    
T  26058775 agttcctcaagtataagaatgttaatgagtcaggtttgttgttttttt 26058822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 26078745 - 26078792
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgtttt 48  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||||    
T  26078745 agttcctcaagtataagaatgttaatgagtcaggtttgttgttttttt 26078792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 26145853 - 26145900
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgtttt 48  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||||    
T  26145853 agttcctcaagtataagaatgttaatgagtcaggtttgttgttttttt 26145900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 275
Target Start/End: Original strand, 26146036 - 26146103
Alignment:
Q  208 gattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgtaaagaaatcccttctat 275  Q
    |||||||||||||||||||||||||||  || |||| ||||||||| || |||| || ||||||||||    
T  26146036 gattggtttgagcaccaaagcaggggaggcaaaattgctttctggtatcataaaaaactcccttctat 26146103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 26649332 - 26649379
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgtttt 48  Q
    ||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  26649332 agttcctcaagtagaagaatgttattgagtcaggttcgttgttgtttt 26649379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 26755300 - 26755347
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgtttt 48  Q
    ||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  26755300 agttcctcaagtagaagaatgttattgagtcaggttcgttgttgtttt 26755347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 274
Target Start/End: Complemental strand, 27528763 - 27528708
Alignment:
Q  219 gcaccaaagcaggggacccacaatttctttctggtttcgtaaagaaatcccttcta 274  Q
    |||| |||||| ||||| ||||||||||||||||||||||||| | ||||||||||    
T  27528763 gcacaaaagcaagggacacacaatttctttctggtttcgtaaaaagatcccttcta 27528708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 285
Target Start/End: Complemental strand, 27662506 - 27662413
Alignment:
Q  195 agagggaataccagattggtttgagcaccaaagcaggggaccca---caatttctttctggtttcgtaaagaaatcccttctataacttgtatt 285  Q
    |||||| || ||||||||||| ||||| |||  |||||||| ||   ||||||||||||||||  ||||| | |||||||||||||||||||||    
T  27662506 agaggggattccagattggttcgagcatcaagtcaggggacacaactcaatttctttctggttatgtaaaaagatcccttctataacttgtatt 27662413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 260
Target Start/End: Original strand, 28246419 - 28246474
Alignment:
Q  205 ccagattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgtaa 260  Q
    |||||||||||||| |||||||||| |||||  ||||||||||| |||||||||||    
T  28246419 ccagattggtttgatcaccaaagcatgggacatacaatttctttttggtttcgtaa 28246474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 25491448 - 25491406
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgtt 43  Q
    ||||| |||||||||||||||||| ||||||||||||||||||    
T  25491448 agttcctcaagtagaagaatgttattgagtcaggtttgttgtt 25491406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 31287435 - 31287477
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgtt 43  Q
    ||||| ||||||||||||||||||| |||||||||||||||||    
T  31287435 agttcctcaagtagaagaatgttaacgagtcaggtttgttgtt 31287477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26886965 - 26887010
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgtt 46  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||    
T  26886965 agttcctcaagtagaagaatgttattgagtcaggtttgtttttgtt 26887010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 258
Target Start/End: Original strand, 28142689 - 28142742
Alignment:
Q  205 ccagattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgt 258  Q
    ||||| ||||||||||||||||||| ||||||  ||||| ||||||||||||||    
T  28142689 ccagagtggtttgagcaccaaagcaagggaccatcaattactttctggtttcgt 28142742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 25485852 - 25485888
Alignment:
Q  7 tcaagtagaagaatgttaatgagtcaggtttgttgtt 43  Q
    ||||||| |||||||||||||||||||||||||||||    
T  25485852 tcaagtataagaatgttaatgagtcaggtttgttgtt 25485888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 26952481 - 26952521
Alignment:
Q  8 caagtagaagaatgttaatgagtcaggtttgttgttgtttt 48  Q
    |||||||||||||| || |||||||||||||||||||||||    
T  26952481 caagtagaagaatgctattgagtcaggtttgttgttgtttt 26952521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 27602030 - 27601982
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttg-ttgttgtttt 48  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||||||||    
T  27602030 agttcctcaagtagaagaatgttattgagtcaggtttgtttgttgtttt 27601982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 27662679 - 27662623
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgttttctattgcac 57  Q
    ||||| |||||||||||||||||| ||||||||||||||| || |||| | ||||||    
T  27662679 agttcctcaagtagaagaatgttattgagtcaggtttgtttttattttatcttgcac 27662623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 27715807 - 27715751
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgttttctattgcac 57  Q
    ||||| ||||||| |||||| ||||||||||||||| ||||||||||| ||| ||||    
T  27715807 agttcctcaagtaaaagaatattaatgagtcaggttagttgttgttttatatagcac 27715751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 247
Target Start/End: Original strand, 26808437 - 26808544
Alignment:
Q  140 actaacagcaactacatgaggctcgatggacctatttttatttcccaaacagaagagagggaataccagattggtttgagcaccaaagcaggggacccac 239  Q
    |||||||| | ||||||||||||  ||  ||| || ||| ||| ||||| |||| |||||| || ||||||||||| |||||||||| || ||||| |||    
T  26808437 actaacagaacctacatgaggctgtatccaccaatatttgtttgccaaaaagaacagaggggattccagattggttcgagcaccaaatcaagggacgcac 26808536  T
Q  240 aatttctt 247  Q
     |||||||    
T  26808537 tatttctt 26808544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 26851366 - 26851413
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgtttt 48  Q
    ||||| ||||| |||||||||||| ||||||||||||||| |||||||    
T  26851366 agttcctcaagcagaagaatgttattgagtcaggtttgttattgtttt 26851413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 27608427 - 27608380
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgtttt 48  Q
    ||||| ||||||| ||||| |||||||||||||||| |||||||||||    
T  27608427 agttcctcaagtaaaagaaagttaatgagtcaggttagttgttgtttt 27608380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 27657872 - 27657793
Alignment:
Q  195 agagggaataccagattggtttgagcaccaaagcagggg-acccacaatttctttctggtttcgtaaagaaatcccttct 273  Q
    |||||| || ||||||||||  |||||||||| |||||| |   |||||||||||||||||||||||| | |||||||||    
T  27657872 agaggggattccagattggtacgagcaccaaatcagggggagatacaatttctttctggtttcgtaaaaagatcccttct 27657793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 28795265 - 28795307
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgtt 43  Q
    ||||| ||||||||||||||| || ||||||||||||||||||    
T  28795265 agttcctcaagtagaagaatgctattgagtcaggtttgttgtt 28795307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 258
Target Start/End: Complemental strand, 2170698 - 2170645
Alignment:
Q  205 ccagattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgt 258  Q
    ||||| |||||||| || ||||||| ||||||  ||||||||||||||||||||    
T  2170698 ccagagtggtttgatcaacaaagcaagggaccatcaatttctttctggtttcgt 2170645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26638258 - 26638303
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgtt 46  Q
    ||||| ||||||||||||| | || |||||||||||||||||||||    
T  26638258 agttcctcaagtagaagaaggctattgagtcaggtttgttgttgtt 26638303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26744224 - 26744269
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgtt 46  Q
    ||||| ||||||||||||| | || |||||||||||||||||||||    
T  26744224 agttcctcaagtagaagaaggctattgagtcaggtttgttgttgtt 26744269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 27658042 - 27658001
Alignment:
Q  7 tcaagtagaagaatgttaatgagtcaggtttgttgttgtttt 48  Q
    |||| ||||||||||||| | |||||||||||||||||||||    
T  27658042 tcaactagaagaatgttatttagtcaggtttgttgttgtttt 27658001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 143 - 284
Target Start/End: Original strand, 16262 - 16403
Alignment:
Q  143 aacagcaactacatgaggctcgatggacctatttttatttcccaaacagaagagagggaataccagattggtttgagcaccaaagcaggggacccacaat 242  Q
    ||||| |||||||| ||||| |||| |||||| || | ||||||||| ||| ||| || |||||||||||||||||||||||||||||||||||||||||    
T  16262 aacagaaactacatcaggctggatgcacctatattaaattcccaaacggaacagatgggataccagattggtttgagcaccaaagcaggggacccacaat 16361  T
Q  243 ttctttctggtttcgtaaagaaatcccttctataacttgtat 284  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  16362 ttctttctggtttcgtaaagaaatcccttctataacttgtat 16403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16138 - 16194
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgttttctattgcac 57  Q
    ||||| ||||||| |||||| ||||||||||||||| ||||||||||| ||| ||||    
T  16138 agttcctcaagtaaaagaatattaatgagtcaggttagttgttgttttatatagcac 16194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 7e-43; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 140 - 296
Target Start/End: Complemental strand, 265511 - 265355
Alignment:
Q  140 actaacagcaactacatgaggctcgatggacctatttttatttcccaaacagaagagagggaataccagattggtttgagcaccaaagcaggggacccac 239  Q
    |||||||| |||||||||| |||||||| || ||||| |||||||||||| ||| |||||| |||||||||||||||||||||||||||| ||||  |||    
T  265511 actaacagaaactacatgaagctcgatgcacttatttgtatttcccaaacggaacagaggggataccagattggtttgagcaccaaagcaagggaaacac 265412  T
Q  240 aatttctttctggtttcgtaaagaaatcccttctataacttgtatttttattcttcc 296  Q
    |||||||||||||||||||||| | ||||||||| | |||| |||| ||||||||||    
T  265411 aatttctttctggtttcgtaaaaagatcccttctgttacttttattattattcttcc 265355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 265638 - 265582
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgttttctattgcac 57  Q
    ||||| ||||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  265638 agttcctcaagtaaaagaatgttattgagtcaggtttgttgttgttttttattgcac 265582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 288
Target Start/End: Original strand, 26139027 - 26139110
Alignment:
Q  205 ccagattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgtaaagaaatcccttctataacttgtattttt 288  Q
    ||||||||||| |||||||||  | |||| |  |||||||||||||||||| ||||| ||||||||||||||| || |||||||    
T  26139027 ccagattggttcgagcaccaatccggggggcagacaatttctttctggttttgtaaaaaaatcccttctataagttctattttt 26139110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 277
Target Start/End: Complemental strand, 28129768 - 28129711
Alignment:
Q  220 caccaaagcaggggacccacaatttctttctggtttcgtaaagaaatcccttctataa 277  Q
    ||||||||| ||||||  ||  ||||||||||||||||||||||||||||||||||||    
T  28129768 caccaaagctggggacatactgtttctttctggtttcgtaaagaaatcccttctataa 28129711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 277
Target Start/End: Complemental strand, 28124715 - 28124680
Alignment:
Q  242 tttctttctggtttcgtaaagaaatcccttctataa 277  Q
    ||||||||||||||||||||||||||||||||||||    
T  28124715 tttctttctggtttcgtaaagaaatcccttctataa 28124680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 197 - 296
Target Start/End: Complemental strand, 29270965 - 29270866
Alignment:
Q  197 agggaataccagattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgtaaagaaatcccttctataacttgtatttttattcttcc 296  Q
    |||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  29270965 aggggataccagattggttcgaacaccaaagcaggggacccacaatttctttctggtttcgtaaagaaatcccttctattacttgtatttttatgcttcc 29270866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 29271146 - 29271099
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgtttt 48  Q
    ||||| ||||||| |||||||||||||||||||||| |||||||||||    
T  29271146 agttcctcaagtaaaagaatgttaatgagtcaggttagttgttgtttt 29271099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 22024132 - 22024174
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgtt 43  Q
    ||||| |||||||||||||||||| ||||||||||||||||||    
T  22024132 agttcctcaagtagaagaatgttattgagtcaggtttgttgtt 22024174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 205 - 280
Target Start/End: Complemental strand, 17990257 - 17990182
Alignment:
Q  205 ccagattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgtaaagaaatcccttctataactt 280  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  17990257 ccagattggtttgagcaccaaagcagggggcacacaatttctttctggtttcgtaaagaaatcccttctataactt 17990182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 4e-29; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 140 - 301
Target Start/End: Complemental strand, 18696636 - 18696475
Alignment:
Q  140 actaacagcaactacatgaggctcgatggacctatttttatttcccaaacagaagagagggaataccagattggtttgagcaccaaagcaggggacccac 239  Q
    ||||||||||| ||||||||||| | || ||| | |||| |||||||||| ||| |||||| || ||||||||||| ||||| ||||||||||| |   |    
T  18696636 actaacagcaattacatgaggctgggtgcaccaaattttctttcccaaacggaacagaggggattccagattggttcgagcatcaaagcaggggtcaatc 18696537  T
Q  240 aatttctttctggtttcgtaaagaaatcccttctataacttgtatttttattcttcctgatg 301  Q
    ||||||||||||||| |||||| | ||||||||||||| || |||| |||||||||| ||||    
T  18696536 aatttctttctggttccgtaaaaagatcccttctataaattttattattattcttccggatg 18696475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 301
Target Start/End: Complemental strand, 18652711 - 18652544
Alignment:
Q  140 actaacagcaactacatgaggctcgatggacctatttttatttcccaaacagaagagagggaata------ccagattggtttgagcaccaaagcagggg 233  Q
    ||||||||||| ||||||||||| | || ||| || ||| |||||||||| ||| |||||| ||       ||||||||||| ||||| |||||||||||    
T  18652711 actaacagcaattacatgaggctgggtgcaccaatatttgtttcccaaacggaacagaggggattaggattccagattggttcgagcatcaaagcagggg 18652612  T
Q  234 acccacaatttctttctggtttcgtaaagaaatcccttctataacttgtatttttattcttcctgatg 301  Q
     |   |||||||||||||||| |||||| | |||||||||||||||| |||| |||||||||| ||||    
T  18652611 tcaatcaatttctttctggttccgtaaaaagatcccttctataacttctattattattcttccggatg 18652544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 301
Target Start/End: Complemental strand, 18676793 - 18676626
Alignment:
Q  140 actaacagcaactacatgaggctcgatggacctatttttatttcccaaacagaagagagg------gaataccagattggtttgagcaccaaagcagggg 233  Q
    ||||||||||| ||||||||||| | || ||| || ||| |||||||||| ||| |||||      | || ||||||||||| ||||| |||||||||||    
T  18676793 actaacagcaattacatgaggctgggtgcaccaatatttgtttcccaaacggaacagaggagattaggattccagattggttcgagcatcaaagcagggg 18676694  T
Q  234 acccacaatttctttctggtttcgtaaagaaatcccttctataacttgtatttttattcttcctgatg 301  Q
     |   |||||||||||||||| |||||| | |||||||||||||||| |||| |||||||||| ||||    
T  18676693 tcaatcaatttctttctggttccgtaaaaagatcccttctataacttctattattattcttccggatg 18676626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 205 - 301
Target Start/End: Complemental strand, 18721236 - 18721140
Alignment:
Q  205 ccagattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgtaaagaaatcccttctataacttgtatttttattcttcctgatg 301  Q
    ||||||||||| ||||||||||||||||| |   ||||||||||||||||  ||||| | |||||||||||||||| |||| |||||||||| ||||    
T  18721236 ccagattggttcgagcaccaaagcaggggtcattcaatttctttctggttctgtaaaaagatcccttctataacttttattattattcttccggatg 18721140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 296
Target Start/End: Complemental strand, 18728661 - 18728570
Alignment:
Q  205 ccagattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgtaaagaaatcccttctataacttgtatttttattcttcc 296  Q
    ||||||||||| ||||| ||||||||||| |   ||||||||||||||||  ||||| | |||||||||||||||| |||| ||||||||||    
T  18728661 ccagattggttcgagcatcaaagcaggggtcattcaatttctttctggttctgtaaaaagatcccttctataacttttattattattcttcc 18728570  T

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Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 301
Target Start/End: Complemental strand, 18686765 - 18686669
Alignment:
Q  205 ccagattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgtaaagaaatcccttctataacttgtatttttattcttcctgatg 301  Q
    ||||||||||| ||||| ||||||||||| |   ||||||||||||||||  ||||| | |||||||||||||||| |||  |||||||||| ||||    
T  18686765 ccagattggttcgagcatcaaagcaggggtcaatcaatttctttctggttctgtaaaaagatcccttctataacttctataattattcttccggatg 18686669  T

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Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 18652830 - 18652783
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgtttt 48  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||    
T  18652830 agttcctcaagtagaagaatgttattgagtcaggtttgttgttgtttt 18652783  T

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Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 18676912 - 18676865
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgtttt 48  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||    
T  18676912 agttcctcaagtagaagaatgttattgagtcaggtttgttgttgtttt 18676865  T

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Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 18686961 - 18686914
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgtttt 48  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||    
T  18686961 agttcctcaagtagaagaatgttattgagtcaggtttgttgttgtttt 18686914  T

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Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 18696755 - 18696708
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgtttt 48  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||    
T  18696755 agttcctcaagtagaagaatgttattgagtcaggtttgttgttgtttt 18696708  T

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Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 18721426 - 18721379
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgttgtttt 48  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||    
T  18721426 agttcctcaagtagaagaatgttattgagtcaggtttgttgttgtttt 18721379  T

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Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18728848 - 18728806
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgtt 43  Q
    ||||| |||| ||||||||||||| ||||||||||||||||||    
T  18728848 agttcctcaactagaagaatgttattgagtcaggtttgttgtt 18728806  T

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Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 18682108 - 18682067
Alignment:
Q  7 tcaagtagaagaatgttaatgagtcaggtttgttgttgtttt 48  Q
    |||| ||||||||||||  |||||||||||||||||||||||    
T  18682108 tcaaatagaagaatgttgttgagtcaggtttgttgttgtttt 18682067  T

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Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 18701029 - 18700968
Alignment:
Q  240 aatttctttctggtttcgtaaagaaatcccttctataacttgtatttttattcttcctgatg 301  Q
    |||||||||||||||  ||||| | ||||| |||||||||| |||| |||||||||| ||||    
T  18701029 aatttctttctggttctgtaaaaagatcccatctataacttctattattattcttccggatg 18700968  T

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Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 18686842 - 18686782
Alignment:
Q  140 actaacagcaactacatgaggctcgatggacctatttttatttcccaaacagaagagaggg 200  Q
    ||||||||||| ||||||||||| | || ||||  ||||||||||||||| ||| ||||||    
T  18686842 actaacagcaattacatgaggctgggtgcacctcattttatttcccaaacggaacagaggg 18686782  T

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Target: scaffold0419 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 274
Target Start/End: Original strand, 10555 - 10624
Alignment:
Q  205 ccagattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgtaaagaaatcccttcta 274  Q
    ||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||| | ||||||||||    
T  10555 ccagattggttcgagcaccaaagcaggggagacacaatttctttctggtttcgtaaaaagatcccttcta 10624  T

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Target: scaffold0419; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10391 - 10433
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgtt 43  Q
    ||||| ||||||||||||||| || ||||||||||||||||||    
T  10391 agttcctcaagtagaagaatgctattgagtcaggtttgttgtt 10433  T

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Target: scaffold0277 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 274
Target Start/End: Complemental strand, 1828 - 1759
Alignment:
Q  205 ccagattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgtaaagaaatcccttcta 274  Q
    ||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||| | ||||||||||    
T  1828 ccagattggttcgagcaccaaagcaggggagacacaatttctttctggtttcgtaaaaagatcccttcta 1759  T

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Target: scaffold0277; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 274
Target Start/End: Complemental strand, 10794 - 10725
Alignment:
Q  205 ccagattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgtaaagaaatcccttcta 274  Q
    ||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||| | ||||||||||    
T  10794 ccagattggttcgagcaccaaagcaggggagacacaatttctttctggtttcgtaaaaagatcccttcta 10725  T

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Target: scaffold0277; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1995 - 1953
Alignment:
Q  1 agttcatcaagtagaagaatgttaatgagtcaggtttgttgtt 43  Q
    ||||| ||||||||||||||| || ||||||||||||||||||    
T  1995 agttcttcaagtagaagaatgctattgagtcaggtttgttgtt 1953  T

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Target: scaffold0038 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 260
Target Start/End: Original strand, 46581 - 46636
Alignment:
Q  205 ccagattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgtaa 260  Q
    |||||||||||||| |||||||||| |||||  ||||||||||| |||||||||||    
T  46581 ccagattggtttgatcaccaaagcatgggacatacaatttctttttggtttcgtaa 46636  T

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Target: scaffold0286 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 258
Target Start/End: Original strand, 12563 - 12616
Alignment:
Q  205 ccagattggtttgagcaccaaagcaggggacccacaatttctttctggtttcgt 258  Q
    ||||| |||||||| || ||||||| ||||||  ||||||||||||||||||||    
T  12563 ccagagtggtttgatcaacaaagcaagggaccatcaatttctttctggtttcgt 12616  T

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