View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8025_low_9 (Length: 207)
Name: NF8025_low_9
Description: NF8025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8025_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 128; Significance: 2e-66; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 19 - 191
Target Start/End: Original strand, 5645539 - 5645711
Alignment:
| Q |
19 |
acatcatgactcctgttccttcctatccgactaagataaggattgccaagagttgggcagccattcctctagcctatatctaacaactcgatattgttgt |
118 |
Q |
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| T |
5645539 |
acatcatgactcttgtttcttcctatccgactaagataaggattgccaagagttgggcagccattcctctagtctatatctaacaagtcgatattgttgt |
5645638 |
T |
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| Q |
119 |
acttttaatgatatgtataaagccattcaattcttgagtatannnnnnngagggaacaattcttgagtatatt |
191 |
Q |
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||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |
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| T |
5645639 |
acttttagtgatatgtataaagctattcaattcttgagtatatttttttgagggaacaattcttgagtatatt |
5645711 |
T |
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