View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8026_high_20 (Length: 237)
Name: NF8026_high_20
Description: NF8026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8026_high_20 |
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Alignment Details
Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 37362138 - 37362356
Alignment:
| Q |
1 |
taaatatcaacaacaccaatatcactagcttgatgttcttcttttctttccattgcttcaatcatagattcattcatgagcattgtagttgttgcaaaat |
100 |
Q |
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| T |
37362138 |
taaatatcaacaacaccaatatcactagcttgatgttcttcttttctttccattgcttcaatcatagattcattcatgagcattgtagttgttgcaaaat |
37362237 |
T |
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| Q |
101 |
tttcatcaacttgcactagtttgtatttccatatgtagagaagagtagacaaaagaattgccatagatgagaagaagagtgagaaaaaccctaatccaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37362238 |
tttcatcaacttgcactagtttgtatttccatatgtagagaagagtagacaaaagaattgccatagatgagaagaagagtgagaaaaaccctaatccaac |
37362337 |
T |
|
| Q |
201 |
aagtttgtaagttgaaaaa |
219 |
Q |
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||||||||||||||||||| |
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| T |
37362338 |
aagtttgtaagttgaaaaa |
37362356 |
T |
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