View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8026_low_8 (Length: 370)
Name: NF8026_low_8
Description: NF8026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8026_low_8 |
 | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold0349 (2 HSPs) |
| | |
|
| [»] scaffold0419 (2 HSPs) |
| | |
|
| [»] scaffold0277 (4 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 320; Significance: 1e-180; HSPs: 38)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 17 - 348
Target Start/End: Complemental strand, 26803004 - 26802673
Alignment:
| Q |
17 |
ataagttagtatgtactaacaacatcacaatcacatccatgtactcataatatattatacatttctaactatttcgacatataaataactaatacttgtt |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
26803004 |
ataagttagtatgtactaacaacatcacaatcacatccatgtactcataatatattatacatttctaactatttcaacatataaataactaatacttgtt |
26802905 |
T |
|
| Q |
117 |
taaaaacgtatataagaaaggtatttcccatttaacctttaagatgagattattgggaaattgaagttgaagaaataaaatataaaagggaaaaatagga |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26802904 |
taaaaacgtatataagaaaggtatttcccatttaacctttaagatgagattattgggaaattgaagttgaagaaataaaatataaaagggaaaaatagga |
26802805 |
T |
|
| Q |
217 |
tttaagtaaagttgggtaccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacctctccatgtta |
316 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
26802804 |
tttaagtaaagttgggtaccgaggaggactatcatggtagccggacaagttagcagcctggctcagagccactttccatcgctccaacctctccatgtta |
26802705 |
T |
|
| Q |
317 |
tccttatcattttgaaaccttttttcatgctc |
348 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
26802704 |
tccttatcattttgaaaccttttttcatgctc |
26802673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 32 - 348
Target Start/End: Original strand, 27592657 - 27592976
Alignment:
| Q |
32 |
ctaacaacatcacaatcacatccatgtactcataatatattatacatttctaactatttcgacatataaataactaata---cttgtttaaaaacgtata |
128 |
Q |
| |
|
|||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
27592657 |
ctaacaacatcacaatcacatccatgtactaagaatgtattatacatttctaactatttcgacatataaataactaatagtacttgtttaaaactgtata |
27592756 |
T |
|
| Q |
129 |
taagaaaggtatttcccatttaacctttaagatgagattattgggaaattgaagttgaagaaataaaatataaaagggaaaaataggatttaagtaaagt |
228 |
Q |
| |
|
||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
27592757 |
taaaaaaggtatttcccttttaacctttaagatgagattattgtaaaattgaagttgaagaaataaaatagaaaagggaaaaataggatttaagtaaagt |
27592856 |
T |
|
| Q |
229 |
tgggtaccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacctctccatgttatccttatcattt |
328 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||| | | ||||||| |
|
|
| T |
27592857 |
tgggtacccaggaggactatcatggtagccggacaagttagcagcctggctcagagcgtctttccatccctgcaacctctccatgtttttcggatcattt |
27592956 |
T |
|
| Q |
329 |
tgaaaccttttttcatgctc |
348 |
Q |
| |
|
|||||||| ||||||||||| |
|
|
| T |
27592957 |
tgaaacctcttttcatgctc |
27592976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 32 - 348
Target Start/End: Complemental strand, 27679496 - 27679177
Alignment:
| Q |
32 |
ctaacaacatcacaatcacatccatgtactcataatatattatacatttctaactatttcgacatataaataactaata---cttgtttaaaaacgtata |
128 |
Q |
| |
|
|||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
27679496 |
ctaacaacatcacaatcacatccatgtactaagaatgtattatacatttctaactatttcgacatataaataactaatagtacttgtttaaaactgtata |
27679397 |
T |
|
| Q |
129 |
taagaaaggtatttcccatttaacctttaagatgagattattgggaaattgaagttgaagaaataaaatataaaagggaaaaataggatttaagtaaagt |
228 |
Q |
| |
|
||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
27679396 |
taaaaaaggtatttcccttttaacctttaagatgagattattgtaaaattgaagttgaagaaataaaatagaaaagggaaaaataggatttaagtaaagt |
27679297 |
T |
|
| Q |
229 |
tgggtaccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacctctccatgttatccttatcattt |
328 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| | ||||||||||||||| | | ||||||| |
|
|
| T |
27679296 |
tgggtacccaggaggactatcatggtagccggacaagttagcagcctggctcagagcctttttccatccttgcaacctctccatgtttttcggatcattt |
27679197 |
T |
|
| Q |
329 |
tgaaaccttttttcatgctc |
348 |
Q |
| |
|
|||||||| ||||||||||| |
|
|
| T |
27679196 |
tgaaacctcttttcatgctc |
27679177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 32 - 348
Target Start/End: Original strand, 27677256 - 27677570
Alignment:
| Q |
32 |
ctaacaacatcacaatcacatccatgtactcataatatattatacatttctaactatttcgacatataaataactaatacttgtttaaaaac-gtatata |
130 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| | ||| ||||| ||||||| |
|
|
| T |
27677256 |
ctaacaacatcacaatcacatccatgtact---aatgtattatacatttctaactatttcgacatataaataactaatagtacttttaaaactgtatata |
27677352 |
T |
|
| Q |
131 |
agaaaggtatttcccatttaacctttaagatgagattattgggaaattgaagttgaagaaataaaatataaaagggaaaaataggatttaagtaaagttg |
230 |
Q |
| |
|
| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
27677353 |
aaaaaggtatttcccttttaacctttaagatgagattattgtgaaattgaagttgaagaaataaaatagaaaagggaaaaataggatttaagtaaagttg |
27677452 |
T |
|
| Q |
231 |
ggtaccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacctctccatgttatccttatcattttg |
330 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| || ||||||||||||| | | | ||||||||| |
|
|
| T |
27677453 |
ggtacccaggaggactatcatggtagccggacaagttagcagcctggctcagagcctctttccatccctgcaacctctccatgcttttcggatcattttg |
27677552 |
T |
|
| Q |
331 |
aaaccttttttcatgctc |
348 |
Q |
| |
|
|||||| ||||||||||| |
|
|
| T |
27677553 |
aaacctcttttcatgctc |
27677570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 32 - 348
Target Start/End: Original strand, 27706040 - 27706358
Alignment:
| Q |
32 |
ctaacaacatcacaatcacatccatgtactcataatatattatacatttctaactatttcgacatataaataactaata---cttgtttaaaaacgtata |
128 |
Q |
| |
|
||||||||||| |||||||||||||||||| | ||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
27706040 |
ctaacaacatcccaatcacatccatgtactaagaatgtattattcatttctaactatttcgacatataaataactaatagtacttgtttaaaactgtata |
27706139 |
T |
|
| Q |
129 |
taagaaaggtatttcccatttaacctttaagatgagattattgggaaattgaagttgaagaaataaaatataaaagggaaaaataggatttaagtaaagt |
228 |
Q |
| |
|
||| ||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
27706140 |
taaaaaaggtatttccc-tttaaactttaagatgagattattgtgaaattgaagttgaagaaataaaatagaaaagggaaaaataggatttaagtaaagt |
27706238 |
T |
|
| Q |
229 |
tgggtaccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacctctccatgttatccttatcattt |
328 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| || ||||||||||||||| | | ||||||| |
|
|
| T |
27706239 |
tgggtacccaggaggactatcatggtagccggacaagttagcagcctggctcagagcctctttccatccctgcaacctctccatgtttttcggatcattt |
27706338 |
T |
|
| Q |
329 |
tgaaaccttttttcatgctc |
348 |
Q |
| |
|
|||||||| ||||||||||| |
|
|
| T |
27706339 |
tgaaacctcttttcatgctc |
27706358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 17 - 348
Target Start/End: Original strand, 27604328 - 27604661
Alignment:
| Q |
17 |
ataagttagtatgtactaacaacatcacaatcacatccatgtac--tcataatatattatacatttctaactatttcgacatataaataactaatacttg |
114 |
Q |
| |
|
||||||||||||||| ||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
27604328 |
ataagttagtatgta---acaacatcataatcacatccatgtacactcagaatatattatacatttctaactattttgacatataaataactaatacttg |
27604424 |
T |
|
| Q |
115 |
tttaaaaacgtatataagaaaggtattt---cccatttaacctttaagatgagattattgggaaattgaagttgaagaaataaaatataaaagggaaaaa |
211 |
Q |
| |
|
|||||||||||| |||| |||||||||| | ||||||||||| || |||||||||||||| ||||||| ||||| ||| |||||| |||||||||||| |
|
|
| T |
27604425 |
tttaaaaacgtaaataaaaaaggtatttgatctcatttaaccttgaatatgagattattgggtaattgaaattgaataaagaaaatacaaaagggaaaaa |
27604524 |
T |
|
| Q |
212 |
taggatttaagtaaagttgggtaccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacctctcca |
311 |
Q |
| |
|
||||||||| ||| |||| ||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||| |||||||| | |
|
|
| T |
27604525 |
taggatttatgtagtgttgagtacccaggaggactatcatggtagccggaaaagttagcagcctggctcagagccactttccatcgctgcaacctcttta |
27604624 |
T |
|
| Q |
312 |
tgttatccttatcattttgaaaccttttttcatgctc |
348 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
27604625 |
tgttatcctcatcattttgaaacctttttttatgctc |
27604661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 5 - 348
Target Start/End: Original strand, 27427224 - 27427562
Alignment:
| Q |
5 |
atgtcgaagaatataagttagtatgtactaacaacatcacaatcacatccatgtactcataatatattatacatttctaactatttcgacatataaataa |
104 |
Q |
| |
|
||||| || |||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
27427224 |
atgtccaataatataagttagtatgtaacaacatca-cacaatcacatccatgtactcataatatattatacatttttaactattttgacatataaataa |
27427322 |
T |
|
| Q |
105 |
ctaatacttgtttaaaaacgtatataagaaaggtatttcccatttaacctttaagatgagattattgggaaattgaagttgaagaaataaaatataaaag |
204 |
Q |
| |
|
|||| | |||||||||||| || |||| |||||| || | |||||| |||||||||| ||||| | ||| ||| || || |||| |||| |||| |
|
|
| T |
27427323 |
ctaacaattgtttaaaaacataaataaaaaaggtgttacacatttaggctttaagatg---gtattgaggaatagaaattaaataaattaaatgcaaaa- |
27427418 |
T |
|
| Q |
205 |
ggaaaaataggatttaagtaaagttgggtaccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaac |
304 |
Q |
| |
|
| |||| |||| ||||||||| | ||||| | || | ||||||||||| || ||||||||||||| | ||||||||| ||||||| ||| |||| |
|
|
| T |
27427419 |
agcaaaacaggaattaagtaaataggcgtacccatgactatcatcatggtagctgggcaagttagcagccagactcagagccactttccattgctgcaac |
27427518 |
T |
|
| Q |
305 |
ctctccatgttatccttatcattttgaaaccttttttcatgctc |
348 |
Q |
| |
|
||||||||||| | | |||||||||||||||| ||||||||||| |
|
|
| T |
27427519 |
ctctccatgtttttcgtatcattttgaaacctattttcatgctc |
27427562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 195 - 348
Target Start/End: Original strand, 27698297 - 27698450
Alignment:
| Q |
195 |
aatataaaagggaaaaataggatttaagtaaagttgggtaccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagccaatttcca |
294 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
27698297 |
aatacaaaagggaaatataggatttaagtaaagttgggtacctgggaggactatcatggtagccggacaagttagcagcctggctcagagcctctttcca |
27698396 |
T |
|
| Q |
295 |
tcgctccaacctctccatgttatccttatcattttgaaaccttttttcatgctc |
348 |
Q |
| |
|
|| || ||||||||||||||| | | ||||||||||||||| ||||||||||| |
|
|
| T |
27698397 |
tccctgcaacctctccatgtttttcggatcattttgaaacctcttttcatgctc |
27698450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 231 - 348
Target Start/End: Original strand, 27718218 - 27718335
Alignment:
| Q |
231 |
ggtaccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacctctccatgttatccttatcattttg |
330 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
27718218 |
ggtacccaggaggactatcatggtagccggacaagttagcagcctggctcagagccactttccatcgctgcaacctctccatgttattcttatcattttg |
27718317 |
T |
|
| Q |
331 |
aaaccttttttcatgctc |
348 |
Q |
| |
|
|||||| ||||||||||| |
|
|
| T |
27718318 |
aaacctcttttcatgctc |
27718335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 231 - 348
Target Start/End: Original strand, 27610841 - 27610958
Alignment:
| Q |
231 |
ggtaccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacctctccatgttatccttatcattttg |
330 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||||| ||||||||| ||||||||| |||||||| || ||||||||||||||||| |||||||||||| |
|
|
| T |
27610841 |
ggtacccaggaggactatcatggtagccggaaaagtttgcagcctggctcagagccactttccatccctgcaacctctccatgttattcttatcattttg |
27610940 |
T |
|
| Q |
331 |
aaaccttttttcatgctc |
348 |
Q |
| |
|
|||||| ||||||||||| |
|
|
| T |
27610941 |
aaacctcttttcatgctc |
27610958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 162 - 345
Target Start/End: Complemental strand, 26884580 - 26884399
Alignment:
| Q |
162 |
gagattattgggaaatt-gaagttgaagaaataaaatataaaagggaaaaataggatttaagtaaagttgggtaccgaggaggactatcatggtagccgg |
260 |
Q |
| |
|
|||||||||||| |||| ||| || |||||| ||||||||||| | |||||| |||||||||||||| || |||| | || ||| ||||||||||| |
|
|
| T |
26884580 |
gagattattggggaatttgaaattaaagaaagaaaatataaaaaaggaaaatatgatttaagtaaagtgggatacccaaga---ctaaaatggtagccgg |
26884484 |
T |
|
| Q |
261 |
acaagttagcagcctgggtcagagccaatttccatcgctccaacctctccatgttatccttatcattttgaaaccttttttcatg |
345 |
Q |
| |
|
||||||||||| | || ||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26884483 |
acaagttagcaacttgcctcatagccattttccatcgctgcaacctctccatgttatccttatcattttgaaaccttttttcatg |
26884399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 36 - 295
Target Start/End: Complemental strand, 26647019 - 26646763
Alignment:
| Q |
36 |
caacatcacaatcacatccatgtactcataatatattatacatttctaactatttcgacatataaataactaatacttgtttaaaaacgtatataagaa- |
134 |
Q |
| |
|
||||||||||| |||| |||||| | ||||||||||||| |||||||| ||| ||||||||||||| | |||||||||||||||| | |||| || |
|
|
| T |
26647019 |
caacatcacaaatacattgatgtaccgagaatatattatacagttctaactcttttgacatataaataatttatacttgtttaaaaacattaataaaaat |
26646920 |
T |
|
| Q |
135 |
aggtatttcccatttaacctttaagatgagattattgggaaattgaagttgaagaaataaaatataaaagggaaaaataggatttaagtaaagttgggta |
234 |
Q |
| |
|
| || ||||| |||||| ||||||||||||||| | ||||| || || || ||| ||||||||||| ||||||| | | |||||||||||| ||||| |
|
|
| T |
26646919 |
atgtgtttcctatttaagctttaagatgagattttgtggaaaaaaaa-ttaaataaagaaaatataaaaaggaaaaacaaggtttaagtaaagtggggta |
26646821 |
T |
|
| Q |
235 |
ccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccat |
295 |
Q |
| |
|
|| |||| |||| |||||| ||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
26646820 |
cccagga---ctataatggtatccggacaagttagcagcttgggtcagagccaacttccat |
26646763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 36 - 295
Target Start/End: Complemental strand, 26752987 - 26752731
Alignment:
| Q |
36 |
caacatcacaatcacatccatgtactcataatatattatacatttctaactatttcgacatataaataactaatacttgtttaaaaacgtatataagaa- |
134 |
Q |
| |
|
||||||||||| |||| |||||| | ||||||||||||| |||||||| ||| ||||||||||||| | |||||||||||||||| | |||| || |
|
|
| T |
26752987 |
caacatcacaaatacattgatgtaccgagaatatattatacagttctaactcttttgacatataaataatttatacttgtttaaaaacattaataaaaat |
26752888 |
T |
|
| Q |
135 |
aggtatttcccatttaacctttaagatgagattattgggaaattgaagttgaagaaataaaatataaaagggaaaaataggatttaagtaaagttgggta |
234 |
Q |
| |
|
| || ||||| |||||| ||||||||||||||| | ||||| || || || ||| ||||||||||| ||||||| | | |||||||||||| ||||| |
|
|
| T |
26752887 |
atgtgtttcctatttaagctttaagatgagattttgtggaaaaaaaa-ttaaataaagaaaatataaaaaggaaaaacaaggtttaagtaaagtggggta |
26752789 |
T |
|
| Q |
235 |
ccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccat |
295 |
Q |
| |
|
|| |||| |||| |||||| ||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
26752788 |
cccagga---ctataatggtatccggacaagttagcagcttgggtcagagccaacttccat |
26752731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 241 - 346
Target Start/End: Complemental strand, 28786616 - 28786511
Alignment:
| Q |
241 |
aggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacctctccatgttatccttatcattttgaaaccttttt |
340 |
Q |
| |
|
||||||| |||||||||||||||||||||||| |||||||||||||| |||||| | | |||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
28786616 |
aggactagaatggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttatccttatcattttgaaacctcttt |
28786517 |
T |
|
| Q |
341 |
tcatgc |
346 |
Q |
| |
|
|||||| |
|
|
| T |
28786516 |
tcatgc |
28786511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 241 - 346
Target Start/End: Complemental strand, 28792737 - 28792632
Alignment:
| Q |
241 |
aggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacctctccatgttatccttatcattttgaaaccttttt |
340 |
Q |
| |
|
||||||| |||||||||||||||||||||||| |||||||||||||| |||||| | | |||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
28792737 |
aggactagaatggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttatccttatcattttgaaacctcttt |
28792638 |
T |
|
| Q |
341 |
tcatgc |
346 |
Q |
| |
|
|||||| |
|
|
| T |
28792637 |
tcatgc |
28792632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 241 - 345
Target Start/End: Complemental strand, 28781477 - 28781373
Alignment:
| Q |
241 |
aggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacctctccatgttatccttatcattttgaaaccttttt |
340 |
Q |
| |
|
||||||| |||||||||||||||||||||||| |||||||||||||| |||||| | | |||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
28781477 |
aggactagaatggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttatccttatcattttgaaacctcttt |
28781378 |
T |
|
| Q |
341 |
tcatg |
345 |
Q |
| |
|
||||| |
|
|
| T |
28781377 |
tcatg |
28781373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 28781659 - 28781516
Alignment:
| Q |
17 |
ataagttagtatgtactaacaacatcacaatcacatccatgtactcataatatattatacatttctaactatttcgacatataaataact-aatacttgt |
115 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||| |||||| | |||| |||| |
|
|
| T |
28781659 |
ataagttagtatgta---acaacatcacaatcacatccatgtactcagaatatagtatacatttctaactattttgacataaaaataattaaataattgt |
28781563 |
T |
|
| Q |
116 |
ttaaaaacgtatataagaaaggtatttcccatttaacctttaagatg |
162 |
Q |
| |
|
||||||||||| ||| ||| || ||||||||||| |||||||||| |
|
|
| T |
28781562 |
ttaaaaacgtaaatagaaaaagtgtttcccatttaggctttaagatg |
28781516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 145
Target Start/End: Complemental strand, 28786796 - 28786670
Alignment:
| Q |
17 |
ataagttagtatgtactaacaacatcacaatcacatccatgtactcataatatattatacatttctaactatttcgacatataaataact-aatacttgt |
115 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||| |||||| | ||||||||| |
|
|
| T |
28786796 |
ataagttagtatgta---acaacatcacaatcacatccatgtactcagaatatagtatacatttctaactattttgacataaaaataattaaatacttgt |
28786700 |
T |
|
| Q |
116 |
ttaaaaacgtatataagaaaggtatttccc |
145 |
Q |
| |
|
||||||||||| ||| |||||| |||||| |
|
|
| T |
28786699 |
ttaaaaacgtaaatagaaaaggtgtttccc |
28786670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 145
Target Start/End: Complemental strand, 28792917 - 28792791
Alignment:
| Q |
17 |
ataagttagtatgtactaacaacatcacaatcacatccatgtactcataatatattatacatttctaactatttcgacatataaataact-aatacttgt |
115 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||| |||||| | ||||||||| |
|
|
| T |
28792917 |
ataagttagtatgta---acaacatcacaatcacatccatgtactcagaatatagtatacatttctaactattttgacataaaaataattaaatacttgt |
28792821 |
T |
|
| Q |
116 |
ttaaaaacgtatataagaaaggtatttccc |
145 |
Q |
| |
|
||||||||||| ||| |||||| |||||| |
|
|
| T |
28792820 |
ttaaaaacgtaaatagaaaaggtgtttccc |
28792791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 186 - 347
Target Start/End: Complemental strand, 26862000 - 26861845
Alignment:
| Q |
186 |
aagaaataaaatataaaagggaaaaataggatttaagtaaagttgggtaccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagc |
285 |
Q |
| |
|
|||||| ||||||||||| |||| ||||||||| || |||| ||||||| |||| ||| ||||||||| |||||||||||||| ||| ||||||| |
|
|
| T |
26862000 |
aagaaagaaaatataaaaaggaa---taggatttatgttaagtggggtacccagga---ctaaaatggtagcctgacaagttagcagcttggttcagagc |
26861907 |
T |
|
| Q |
286 |
caatttccatcgctccaacctctccatgttatccttatcattttgaaaccttttttcatgct |
347 |
Q |
| |
|
| |||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
26861906 |
aactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgct |
26861845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 27698224 - 27698301
Alignment:
| Q |
34 |
aacaacatcacaatcacatccatgtactcataatatattatacatttctaactatttcgacatataaataactaatac |
111 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
27698224 |
aacaacatcacaatcacatctatgtactcagaatatattataaatttctaactatttcgacatataaataactaatac |
27698301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 175 - 346
Target Start/End: Original strand, 27530983 - 27531151
Alignment:
| Q |
175 |
aattgaagttgaagaaataaaatataaaagggaaaaataggatttaagtaaagttgggtaccgaggaggactatcatggtagccggacaagttagcagcc |
274 |
Q |
| |
|
||||||| || |||||| |||||||||||||||||||||||||||||||||||| || |||| | | ||| ||| | ||| ||||||||||| || |
|
|
| T |
27530983 |
aattgaaattaaagaaagaaaatataaaagggaaaaataggatttaagtaaagtgggctacc---catgtttataatgctggccagacaagttagccgct |
27531079 |
T |
|
| Q |
275 |
tgggtcagagccaatttccatcgctccaacctctccatgttatccttatcattttgaaaccttttttcatgc |
346 |
Q |
| |
|
||| ||||||| ||||||| ||| ||||||||| ||||||||||||||||||||||| |||||| |||| |
|
|
| T |
27531080 |
tggctcagagcttctttccattgctgcaacctctcagtgttatccttatcattttgaaacttttttttatgc |
27531151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 347
Target Start/End: Complemental strand, 25539079 - 25538772
Alignment:
| Q |
40 |
atcacaatcacatccatgtactcataatatattatacatttctaactatttcgacatataaataactaatacttgttt-aaaaacgtatataagaaaggt |
138 |
Q |
| |
|
|||| ||||||||||||||| | | |||||||||| || |||||| | ||| ||||||||||||||| | |||||||| |||||| | ||| ||| || |
|
|
| T |
25539079 |
atcaaaatcacatccatgtattgagaatatattatgcaattctaatttttttgacatataaataacttacacttgttttaaaaacattaatagaaaatgt |
25538980 |
T |
|
| Q |
139 |
atttcccatttaacctttaagatgagattattgggaaattgaagttgaagaaataaaatataaaagggaaaaataggatttaagtaaagttgggtaccga |
238 |
Q |
| |
|
|| || |||||| ||||||| |||||||| | || || || | ||||||||||||| || ||||||| | |||||||||||||| ||||||| | |
|
|
| T |
25538979 |
gtt-cctatttaagttttaagagtagattatttaggcataaaaattaatgaaataaaatatagaaaggaaaaacaagatttaagtaaagtggggtaccca |
25538881 |
T |
|
| Q |
239 |
ggaggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacctctccatgttatccttatcattttgaaaccttt |
338 |
Q |
| |
|
||||||||| ||| |||||||||||||||||||| ||| | ||||| | |||||| | ||| | ||||||||| | || || |||||||||||| | |
|
|
| T |
25538880 |
tgaggactataatgatagccggacaagttagcagcttggataagagctatcttccattgacgcaatcgctccatgtttttctcattattttgaaacctct |
25538781 |
T |
|
| Q |
339 |
tttcatgct |
347 |
Q |
| |
|
|||||||| |
|
|
| T |
25538780 |
cttcatgct |
25538772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 40 - 273
Target Start/End: Complemental strand, 26143404 - 26143171
Alignment:
| Q |
40 |
atcacaatcacatccatgtactcataatatattatacatttctaactatttcgacatataaataactaatacttgttt-aaaaacgtatataagaaaggt |
138 |
Q |
| |
|
|||| ||||||||||||||| | | |||||||||| || |||||||| ||| ||||||||||||||| | |||||||| |||||| | ||| ||| || |
|
|
| T |
26143404 |
atcaaaatcacatccatgtattgagaatatattatgcaattctaacttttttgacatataaataacttacacttgttttaaaaacattaatagaaaatgt |
26143305 |
T |
|
| Q |
139 |
atttcccatttaacctttaagatgagattattgggaaattgaagttgaagaaataaaatataaaagggaaaaataggatttaagtaaagttgggtaccga |
238 |
Q |
| |
|
|| || |||||| |||| ||| |||||||| | || || || | ||||||||||||| || ||||||| | | |||||||||||| ||||||| | |
|
|
| T |
26143304 |
gtt-cctatttaagctttgagagtagattatttaggcataaaaattaatgaaataaaatatagaaaggaaaaacaagttttaagtaaagtggggtaccca |
26143206 |
T |
|
| Q |
239 |
ggaggactatcatggtagccggacaagttagcagc |
273 |
Q |
| |
|
||||||||| ||| |||||||||||||||||||| |
|
|
| T |
26143205 |
tgaggactataatgatagccggacaagttagcagc |
26143171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 186 - 285
Target Start/End: Complemental strand, 25580112 - 25580013
Alignment:
| Q |
186 |
aagaaataaaatataaaagggaaaaataggatttaagtaaagttgggtaccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagc |
285 |
Q |
| |
|
||||||||||||||| || ||||||| | | |||||||||||| ||||||| | ||||||||| ||| |||||||||||||||||||| ||||| ||||| |
|
|
| T |
25580112 |
aagaaataaaatatagaaaggaaaaagaagttttaagtaaagtggggtacccatgaggactataatgatagccggacaagttagcagcttgggtaagagc |
25580013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 93 - 347
Target Start/End: Complemental strand, 26656476 - 26656221
Alignment:
| Q |
93 |
acatataaataactaatacttgtttaaaaacgtatataagaaaggtatttcccatttaacctttaagatgagattattgggaaattgaagttgaagaaat |
192 |
Q |
| |
|
|||||||||||||| ||||||||||||| || || |||| ||| | |||| | ||| ||||| |||||||||||||| || |||||| |||||| |
|
|
| T |
26656476 |
acatataaataacttatacttgtttaaatacataaataaaaaacatgcttcctttctaagatttaaaatgagattattggggaaaagaagttaaagaaaa |
26656377 |
T |
|
| Q |
193 |
-aaaatataaaag---ggaaaaataggatttaagtaaagttgggtaccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagccaa |
288 |
Q |
| |
|
|||||||||| ||||||| | |||||||||||||| ||||||| || ||| ||||||||| |||||||| ||||| | ||||||||||| |
|
|
| T |
26656376 |
gaaaatataaattacaggaaaaacaagatttaagtaaagtggggtacccttga---ctacaatggtagccagacaagttggcagctttggtcagagccat |
26656280 |
T |
|
| Q |
289 |
tttccatcgctccaacctctccatgttatccttatcattttgaaaccttttttcatgct |
347 |
Q |
| |
|
|||||| |||||||||||| |||||| ||||| | |||||| ||| | |||||||||| |
|
|
| T |
26656279 |
cttccattgctccaacctctgcatgttttccttgttattttggaacttcttttcatgct |
26656221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 93 - 347
Target Start/End: Complemental strand, 26762447 - 26762192
Alignment:
| Q |
93 |
acatataaataactaatacttgtttaaaaacgtatataagaaaggtatttcccatttaacctttaagatgagattattgggaaattgaagttgaagaaat |
192 |
Q |
| |
|
|||||||||||||| ||||||||||||| || || |||| ||| | |||| | ||| ||||| |||||||||||||| || |||||| |||||| |
|
|
| T |
26762447 |
acatataaataacttatacttgtttaaatacataaataaaaaacatgcttcctttctaagatttaaaatgagattattggggaaaagaagttaaagaaaa |
26762348 |
T |
|
| Q |
193 |
-aaaatataaaag---ggaaaaataggatttaagtaaagttgggtaccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagccaa |
288 |
Q |
| |
|
|||||||||| ||||||| | |||||||||||||| ||||||| || ||| ||||||||| |||||||| ||||| | ||||||||||| |
|
|
| T |
26762347 |
gaaaatataaattacaggaaaaacaagatttaagtaaagtggggtacccttga---ctacaatggtagccagacaagttggcagctttggtcagagccat |
26762251 |
T |
|
| Q |
289 |
tttccatcgctccaacctctccatgttatccttatcattttgaaaccttttttcatgct |
347 |
Q |
| |
|
|||||| |||||||||||| |||||| ||||| | |||||| ||| | |||||||||| |
|
|
| T |
26762250 |
cttccattgctccaacctctgcatgttttccttgttattttggaacttcttttcatgct |
26762192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 347
Target Start/End: Original strand, 27337784 - 27338020
Alignment:
| Q |
108 |
atacttgtttaaaaacgtatataagaaaggtatttcccatttaacctttaagatgagattattgggaaattgaagttgaagaaat-aaaatataaaaggg |
206 |
Q |
| |
|
|||||||||||||||| || |||| ||| | |||| ||||| |||||||||||||||| |||| || ||| || |||||| ||||||||||| || |
|
|
| T |
27337784 |
atacttgtttaaaaacataaataaaaaacatgcttcctttttaagctttaagatgagattaatggggaaaagaaattaaagaaaagaaaatataaaaagg |
27337883 |
T |
|
| Q |
207 |
aaaaataggatttaagtaaagttgggtaccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacct |
306 |
Q |
| |
|
||||||| ||| ||||||||| ||||||| || ||| ||||| |||||| ||||||||||| ||||| ||||||| |||||| || |||||| |
|
|
| T |
27337884 |
aaaaataatatt-aagtaaagtggggtacccttga---ctaaaatggtggccggagaagttagcagcttgggtaagagccatcttccatttcttcaacct |
27337979 |
T |
|
| Q |
307 |
ctccatgttatccttatcattttgaaaccttttttcatgct |
347 |
Q |
| |
|
||||||||| ||||| | |||||| ||| | | |||||||| |
|
|
| T |
27337980 |
ctccatgttttccttgttattttggaacttatcttcatgct |
27338020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 347
Target Start/End: Original strand, 27398524 - 27398760
Alignment:
| Q |
108 |
atacttgtttaaaaacgtatataagaaaggtatttcccatttaacctttaagatgagattattgggaaattgaagttgaagaaat-aaaatataaaaggg |
206 |
Q |
| |
|
|||||||||||||||| || |||| ||| | |||| ||||| |||||||||||||||| |||| || ||| || |||||| ||||||||||| || |
|
|
| T |
27398524 |
atacttgtttaaaaacataaataaaaaacatgcttcctttttaagctttaagatgagattaatggggaaaagaaattaaagaaaagaaaatataaaaagg |
27398623 |
T |
|
| Q |
207 |
aaaaataggatttaagtaaagttgggtaccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacct |
306 |
Q |
| |
|
||||||| ||| ||||||||| ||||||| || ||| ||||| |||||| ||||||||||| ||||| ||||||| |||||| || |||||| |
|
|
| T |
27398624 |
aaaaataatatt-aagtaaagtggggtacccttga---ctaaaatggtggccggagaagttagcagcttgggtaagagccatcttccatttcttcaacct |
27398719 |
T |
|
| Q |
307 |
ctccatgttatccttatcattttgaaaccttttttcatgct |
347 |
Q |
| |
|
||||||||| ||||| | |||||| ||| | | |||||||| |
|
|
| T |
27398720 |
ctccatgttttccttgttattttggaacttatcttcatgct |
27398760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 287
Target Start/End: Complemental strand, 25482133 - 25482034
Alignment:
| Q |
188 |
gaaataaaatataaaagggaaaaataggatttaagtaaagttgggtaccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagcca |
287 |
Q |
| |
|
||||||||||||| || ||||||| | | |||||||||||| |||||| | ||||||||| ||| ||||||||||| |||||||| || || ||||||| |
|
|
| T |
25482133 |
gaaataaaatatagaaaggaaaaacaagttttaagtaaagtggggtactcatgaggactataatgatagccggacaaattagcagcttgagtaagagcca |
25482034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 26056458 - 26056375
Alignment:
| Q |
40 |
atcacaatcacatccatgtactcataatatattatacatttctaactatttcgacatataaataactaatacttgtttaaaaac |
123 |
Q |
| |
|
|||| ||||||||||||||| | |||||||||||| || |||||||| ||| ||||||||||||||| | ||| |||| ||||| |
|
|
| T |
26056458 |
atcaaaatcacatccatgtattgataatatattatgcaattctaacttttttgacatataaataacttacactagttttaaaac |
26056375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 26076428 - 26076345
Alignment:
| Q |
40 |
atcacaatcacatccatgtactcataatatattatacatttctaactatttcgacatataaataactaatacttgtttaaaaac |
123 |
Q |
| |
|
|||| ||||||||||||||| | |||||||||||| || |||||||| ||| ||||||||||||||| | ||| |||| ||||| |
|
|
| T |
26076428 |
atcaaaatcacatccatgtattgataatatattatgcaattctaacttttttgacatataaataacttacactagttttaaaac |
26076345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 25506704 - 25506840
Alignment:
| Q |
93 |
acatataaataactaatacttgtttaaaaacgtata-taagaaaggtatttcccatttaacctttaagatgaga-ttattgggaaattgaagttgaagaa |
190 |
Q |
| |
|
|||||||||||||| |||||||||||||||| | || ||| ||| || ||||| |||||| ||||||||||||| ||||| || ||| ||| || ||||| |
|
|
| T |
25506704 |
acatataaataacttatacttgtttaaaaacttttactaaaaaaagtgtttcctatttaaactttaagatgagatttattagggaatagaaattaaagaa |
25506803 |
T |
|
| Q |
191 |
ataaaatataaaagggaaaaataggatttaagtaaag |
227 |
Q |
| |
|
| || | |||||| ||||| | ||||||||||||| |
|
|
| T |
25506804 |
agaagacataaaaaggaaatgcaagatttaagtaaag |
25506840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 287
Target Start/End: Complemental strand, 26056290 - 26056218
Alignment:
| Q |
215 |
gatttaagtaaagttgggtaccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagcca |
287 |
Q |
| |
|
|||||||||||||| |||||| | ||||||||| ||| |||||||||||||||||||| || || ||||||| |
|
|
| T |
26056290 |
gatttaagtaaagtagggtactcatgaggactataatgatagccggacaagttagcagcttgagtaagagcca |
26056218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 287
Target Start/End: Complemental strand, 26076260 - 26076188
Alignment:
| Q |
215 |
gatttaagtaaagttgggtaccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagcca |
287 |
Q |
| |
|
|||||||||||||| |||||| | ||||||||| ||| |||||||||||||||||||| || || ||||||| |
|
|
| T |
26076260 |
gatttaagtaaagtagggtactcatgaggactataatgatagccggacaagttagcagcttgagtaagagcca |
26076188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 248
Target Start/End: Complemental strand, 25511333 - 25511271
Alignment:
| Q |
186 |
aagaaataaaatataaaagggaaaaataggatttaagtaaagttgggtaccgaggaggactat |
248 |
Q |
| |
|
|||||||||||||||||| |||||| | |||||||||||||| ||||||| | ||||||||| |
|
|
| T |
25511333 |
aagaaataaaatataaaaaagaaaaacaagatttaagtaaagtagggtacccatgaggactat |
25511271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 140 - 347
Target Start/End: Complemental strand, 27214858 - 27214652
Alignment:
| Q |
140 |
tttcccatttaacctttaagatgagattattgggaaattgaagttgaagaaataaaatataaa-agggaaaaataggatttaagtaaagttggg-taccg |
237 |
Q |
| |
|
||||| |||||| ||||||| ||| ||||||||| ||| ||| || |||||| ||||||||| ||| ||||||| || |||||| | ||| ||| |
|
|
| T |
27214858 |
tttcctatttaagctttaaggtgatattattggggaatagaaattaaagaaaggaaatataaagaggaaaaaata---ttgaagtaagctgggggtactc |
27214762 |
T |
|
| Q |
238 |
aggaggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacctctccatgttatccttatcattttgaaacctt |
337 |
Q |
| |
|
|| |||||||| ||| ||||| || ||||||||||| ||| | ||||| | |||||| || ||||| ||||||||| ||||| | |||||||||||| |
|
|
| T |
27214761 |
agaaggactataatgatagccagataagttagcagcttggttaagagctatcttccatttctgcaaccgctccatgttttccttgttattttgaaacctc |
27214662 |
T |
|
| Q |
338 |
ttttcatgct |
347 |
Q |
| |
|
| |||||||| |
|
|
| T |
27214661 |
tcttcatgct |
27214652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 347
Target Start/End: Original strand, 27234470 - 27234576
Alignment:
| Q |
241 |
aggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacctctccatgttatccttatcattttgaaaccttttt |
340 |
Q |
| |
|
|||||||| ||| ||||| || ||||||||||| ||| | ||||| | |||||| || ||||| ||||||||| ||||| | |||||||||||| | | |
|
|
| T |
27234470 |
aggactataatgatagccagataagttagcagcttggttaagagctatcttccatttctgcaaccgctccatgttttccttgttattttgaaacctctct |
27234569 |
T |
|
| Q |
341 |
tcatgct |
347 |
Q |
| |
|
||||||| |
|
|
| T |
27234570 |
tcatgct |
27234576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 5 - 348
Target Start/End: Complemental strand, 60139 - 59801
Alignment:
| Q |
5 |
atgtcgaagaatataagttagtatgtactaacaacatcacaatcacatccatgtactcataatatattatacatttctaactatttcgacatataaataa |
104 |
Q |
| |
|
||||| || |||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
60139 |
atgtccaataatataagttagtatgtaacaacatca-cacaatcacatccatgtactcataatatattatacatttttaactattttgacatataaataa |
60041 |
T |
|
| Q |
105 |
ctaatacttgtttaaaaacgtatataagaaaggtatttcccatttaacctttaagatgagattattgggaaattgaagttgaagaaataaaatataaaag |
204 |
Q |
| |
|
|||| | |||||||||||| || |||| |||||| || | |||||| |||||||||| ||||| | ||| ||| || || |||| |||| |||| |
|
|
| T |
60040 |
ctaacaattgtttaaaaacataaataaaaaaggtgttacacatttaggctttaagatg---gtattgaggaatagaaattaaataaattaaatgcaaaa- |
59945 |
T |
|
| Q |
205 |
ggaaaaataggatttaagtaaagttgggtaccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaac |
304 |
Q |
| |
|
| |||| |||| ||||||||| | ||||| | || | ||||||||||| || ||||||||||||| | ||||||||| ||||||| ||| |||| |
|
|
| T |
59944 |
agcaaaacaggaattaagtaaataggcgtacccatgactatcatcatggtagctgggcaagttagcagccagactcagagccactttccattgctgcaac |
59845 |
T |
|
| Q |
305 |
ctctccatgttatccttatcattttgaaaccttttttcatgctc |
348 |
Q |
| |
|
||||||||||| | | |||||||||||||||| ||||||||||| |
|
|
| T |
59844 |
ctctccatgtttttcgtatcattttgaaacctattttcatgctc |
59801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 102; Significance: 1e-50; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 5 - 348
Target Start/End: Complemental strand, 18074331 - 18073993
Alignment:
| Q |
5 |
atgtcgaagaatataagttagtatgtactaacaacatcacaatcacatccatgtactcataatatattatacatttctaactatttcgacatataaataa |
104 |
Q |
| |
|
||||| || |||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
18074331 |
atgtccaataatataagttagtatgtaacaacatca-cacaatcacatccatgtactcataatatattatacatttttaactattttgacatataaataa |
18074233 |
T |
|
| Q |
105 |
ctaatacttgtttaaaaacgtatataagaaaggtatttcccatttaacctttaagatgagattattgggaaattgaagttgaagaaataaaatataaaag |
204 |
Q |
| |
|
|||| | |||||||||||| || |||| |||||| || | |||||| |||||||||| ||||| | ||| ||| || || |||| |||| |||| |
|
|
| T |
18074232 |
ctaacaattgtttaaaaacataaataaaaaaggtgttacacatttaggctttaagatg---gtattgaggaatagaaattaaataaattaaatgcaaaa- |
18074137 |
T |
|
| Q |
205 |
ggaaaaataggatttaagtaaagttgggtaccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaac |
304 |
Q |
| |
|
| |||| |||| ||||||||| | ||||| | || | ||||||||||| || ||||||||||||| | ||||||||| ||||||| ||| |||| |
|
|
| T |
18074136 |
agcaaaacaggaattaagtaaataggcgtacccatgactatcatcatggtagctgggcaagttagcagccagactcagagccactttccattgctgcaac |
18074037 |
T |
|
| Q |
305 |
ctctccatgttatccttatcattttgaaaccttttttcatgctc |
348 |
Q |
| |
|
||||||||||| | | |||||||||||||||| ||||||||||| |
|
|
| T |
18074036 |
ctctccatgtttttcgtatcattttgaaacctattttcatgctc |
18073993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 33 - 315
Target Start/End: Original strand, 18731137 - 18731414
Alignment:
| Q |
33 |
taacaacatcacaatcacatccatgtactcataatatattatacatttctaactatttcgacatataaataactaatacttgtttaaaaacgtatataag |
132 |
Q |
| |
|
||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| | || |
|
|
| T |
18731137 |
taacaacatcacagtcacatccatgtcctcataatatatcatacatttctaactattttgacttataaataactaatacttgtttaaaaatgta-aaaaa |
18731235 |
T |
|
| Q |
133 |
aaaggtatttcccatttaacctttaagatgagattattgggaaattgaagttgaagaaataaaatataaaagggaaaaataggatttaagtaaagttggg |
232 |
Q |
| |
|
|||||| ||||| ||||| |||||||||| ||||||| | ||| || || || ||||||||| |||| || |||| | || |||||||||| | | |
|
|
| T |
18731236 |
aaaggtgtttccaatttaggctttaagatggtattattgaggaataaaaattaaataaataaaatgcaaaatgg-aaaacaagaattaagtaaagaggag |
18731334 |
T |
|
| Q |
233 |
taccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacctctccatgtt |
315 |
Q |
| |
|
|||| | ||||| |||||||||||||||||||||||| | |||||||||||| |||||| | | ||||| ||||||||| |
|
|
| T |
18731335 |
tacc---catgactaaaatggtagccggacaagttagcagcttcggtcagagccaacttccattgatgcaaccgctccatgtt |
18731414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 33 - 315
Target Start/End: Original strand, 18655110 - 18655387
Alignment:
| Q |
33 |
taacaacatcacaatcacatccatgtactcataatatattatacatttctaactatttcgacatataaataactaatacttgtttaaaaacgtatataag |
132 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
18655110 |
taacaacatcacagtcacatccatttactcataatatatcatacatttctaactattttgacttataaataactaatacttgtttaaaaatgtaaataa- |
18655208 |
T |
|
| Q |
133 |
aaaggtatttcccatttaacctttaagatgagattattgggaaattgaagttgaagaaataaaatataaaagggaaaaataggatttaagtaaagttggg |
232 |
Q |
| |
|
|||||| |||| ||||| |||||||||| || |||| | ||| || || || ||||||||| |||| || |||| | || |||||| ||| | | |
|
|
| T |
18655209 |
aaaggtgtttcgaatttaggctttaagatggtatcattgaggaataaaaattaaataaataaaatgcaaaaagg-aaaacatgaattaagtgaagaggag |
18655307 |
T |
|
| Q |
233 |
taccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacctctccatgtt |
315 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||||||| | |||||||||||| |||||| | | ||||| ||||||||| |
|
|
| T |
18655308 |
tacc---caggactagaatggtagccggacaagttagcagcttcggtcagagccaacttccattgatgcaaccgctccatgtt |
18655387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 33 - 315
Target Start/End: Original strand, 18723718 - 18723995
Alignment:
| Q |
33 |
taacaacatcacaatcacatccatgtactcataatatattatacatttctaactatttcgacatataaataactaatacttgtttaaaaacgtatataag |
132 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
18723718 |
taacaacatcacagtcacatccatttactcataatatatcatacatttctaactattttgacttataaataactaatacttgtttaaaaatgtaaataa- |
18723816 |
T |
|
| Q |
133 |
aaaggtatttcccatttaacctttaagatgagattattgggaaattgaagttgaagaaataaaatataaaagggaaaaataggatttaagtaaagttggg |
232 |
Q |
| |
|
|||||| ||||| ||||| |||||||||| |||| || | | || || || ||||||||| |||| || |||| | || |||||||||| | | |
|
|
| T |
18723817 |
aaaggtgtttccaatttaggctttaagatggtattactgaggtttaaaatttaaataaataaaatgcaaaaagg-aaaacaagaattaagtaaagaggag |
18723915 |
T |
|
| Q |
233 |
taccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacctctccatgtt |
315 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||||||| | |||||||||||| |||||| | | ||||| ||||||||| |
|
|
| T |
18723916 |
tacc---caggactaaaatggtagccggacaagttagcagcttcggtcagagccaacttccattgatgcaaccgctccatgtt |
18723995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 33 - 315
Target Start/End: Original strand, 18699033 - 18699310
Alignment:
| Q |
33 |
taacaacatcacaatcacatccatgtactcataatatattatacatttctaactatttcgacatataaataactaatacttgtttaaaaacgtatataag |
132 |
Q |
| |
|
||||||||||||| |||||||||||| |||||| ||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||| || | |
|
|
| T |
18699033 |
taacaacatcacagtcacatccatgtcctcatagtatatcatacatttctaactattttgacttataaataactaatacttgtttaaaaacgta-attaa |
18699131 |
T |
|
| Q |
133 |
aaaggtatttcccatttaacctttaagatgagattattgggaaattgaagttgaagaaataaaatataaaagggaaaaataggatttaagtaaagttggg |
232 |
Q |
| |
|
|||||| ||||| ||||| |||||||||| || |||| | ||| || || || ||||||||| |||| || |||| | || |||||||||| | | |
|
|
| T |
18699132 |
aaaggtgtttccaatttaggctttaagatggtatcattgaggaataaaaattaaataaataaaatgcaaaaagg-aaaacaagaattaagtaaagaggag |
18699230 |
T |
|
| Q |
233 |
taccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacctctccatgtt |
315 |
Q |
| |
|
|||| || |||| |||||||||||||||||||||||| | ||||||||| || |||||| | | ||||| ||||||||| |
|
|
| T |
18699231 |
tacc---cagaactaaaatggtagccggacaagttagcagcttcggtcagagctaacttccattgatgcaaccgctccatgtt |
18699310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 33 - 315
Target Start/End: Original strand, 18679193 - 18679477
Alignment:
| Q |
33 |
taacaacatcacaatcacatccatgtactcataatatattatacatttct-------aactatttcgacatataaataactaatacttgtttaaaaacgt |
125 |
Q |
| |
|
||||||||||||| ||||| ||||||||||||||||||| |||||||||| |||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
18679193 |
taacaacatcacagtcacacccatgtactcataatatatcatacatttctaaattcaaactattttgacttataaataactaatacttgtttaaaaacgt |
18679292 |
T |
|
| Q |
126 |
atataagaaaggtatttcccatttaacctttaagatgagattattgggaaattgaagttgaagaaataaaatataaaagggaaaaataggatttaagtaa |
225 |
Q |
| |
|
| |||| |||||| ||||| ||||| |||| | || ||||||| | ||| | || || ||||||||| |||| || |||| | || |||||||| |
|
|
| T |
18679293 |
aaataa-aaaggtgtttccaatttaggctttcggttggtattattgaggaataaatattaaataaataaaatgcaaaaagg-aaaacaagaattaagtaa |
18679390 |
T |
|
| Q |
226 |
agttgggtaccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacctctccatgtt |
315 |
Q |
| |
|
|| | ||||| ||||||| |||||||||||||||||||||||| | ||||||||| || |||||| | | ||||| ||||||||| |
|
|
| T |
18679391 |
agaggagtacc---caggactaaaatggtagccggacaagttagcagcttcggtcagagctaacttccattgatgcaaccgctccatgtt |
18679477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 348
Target Start/End: Original strand, 3259 - 3377
Alignment:
| Q |
231 |
ggtaccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacctctccatgttatc-cttatcatttt |
329 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||| | | |||||||| |
|
|
| T |
3259 |
ggtacccaggaggactatcatggtagccggacaagttagcagcctggctcagagccactttccatcgctgcaacctctccatgttttttcggatcatttt |
3358 |
T |
|
| Q |
330 |
gaaaccttttttcatgctc |
348 |
Q |
| |
|
||||||| ||||||||||| |
|
|
| T |
3359 |
gaaacctcttttcatgctc |
3377 |
T |
|
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Target: scaffold0349; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 231 - 348
Target Start/End: Original strand, 14195 - 14312
Alignment:
| Q |
231 |
ggtaccgaggaggactatcatggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacctctccatgttatccttatcattttg |
330 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| || ||||||||||||||| | | ||||||||| |
|
|
| T |
14195 |
ggtacccaggaggactatcatggtagccggacaagttagcagcctggctcagagcctctttccatccctgcaacctctccatgtttttcggatcattttg |
14294 |
T |
|
| Q |
331 |
aaaccttttttcatgctc |
348 |
Q |
| |
|
|||||| ||||||||||| |
|
|
| T |
14295 |
aaacctcttttcatgctc |
14312 |
T |
|
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Target: scaffold0419 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 8045 - 7902
Alignment:
| Q |
17 |
ataagttagtatgtactaacaacatcacaatcacatccatgtactcataatatattatacatttctaactatttcgacatataaataact-aatacttgt |
115 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||| || ||| | ||||||||| |
|
|
| T |
8045 |
ataagttagtatgta---acaacatcacaatcacatccatgtactcagaatatagtatacatttctaactattttgacataaaagtaattaaatacttgt |
7949 |
T |
|
| Q |
116 |
ttaaaaacgtatataagaaaggtatttcccatttaacctttaagatg |
162 |
Q |
| |
|
||||||||||| ||| ||| || ||||||||||| |||||||||| |
|
|
| T |
7948 |
ttaaaaacgtaaatagaaaaagtgtttcccatttaggctttaagatg |
7902 |
T |
|
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Target: scaffold0419; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 250 - 345
Target Start/End: Complemental strand, 7854 - 7759
Alignment:
| Q |
250 |
atggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacctctccatgttatccttatcattttgaaaccttttttcatg |
345 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| |||||| | | ||| | ||||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
7854 |
atggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaatcgctccatgttattcttatcattttgaaacctcttttcatg |
7759 |
T |
|
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Target: scaffold0277 (Bit Score: 73; Significance: 3e-33; HSPs: 4)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 13299 - 13442
Alignment:
| Q |
17 |
ataagttagtatgtactaacaacatcacaatcacatccatgtactcataatatattatacatttctaactatttcgacatataaataact-aatacttgt |
115 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||| || ||| | ||||||||| |
|
|
| T |
13299 |
ataagttagtatgta---acaacatcacaatcacatccatgtactcagaatatagtatacatttctaactattttgacataaaagtaattaaatacttgt |
13395 |
T |
|
| Q |
116 |
ttaaaaacgtatataagaaaggtatttcccatttaacctttaagatg |
162 |
Q |
| |
|
||||||||||| ||| ||| || ||||||||||| |||||||||| |
|
|
| T |
13396 |
ttaaaaacgtaaatagaaaaagtgtttcccatttaggctttaagatg |
13442 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 4336 - 4481
Alignment:
| Q |
17 |
ataagttagtatgtactaacaacatcacaatcacatccatgtactcataatatat--tatacatttctaactatttcgacatataaataact-aatactt |
113 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| || ||| | ||||||| |
|
|
| T |
4336 |
ataagttagtatgta---acaacatcacaatcacatccatgtactcataatatatggtatacatttctaactattgtgacataaaagtaattaaatactt |
4432 |
T |
|
| Q |
114 |
gtttaaaaacgtatataagaaaggtatttcccatttaacctttaagatg |
162 |
Q |
| |
|
||||||||||||| ||| |||||| ||||||||||| |||||||||| |
|
|
| T |
4433 |
gtttaaaaacgtaaatataaaaggtgtttcccatttaggctttaagatg |
4481 |
T |
|
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Target: scaffold0277; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 4529 - 4627
Alignment:
| Q |
250 |
atggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacctctccatgttatccttatcattttgaaaccttttttcatgctc |
348 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| |||||| | | ||||||||||||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
4529 |
atggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttattcttatcattttgaaacctcttttcatgctc |
4627 |
T |
|
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Target: scaffold0277; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 250 - 345
Target Start/End: Original strand, 13490 - 13585
Alignment:
| Q |
250 |
atggtagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacctctccatgttatccttatcattttgaaaccttttttcatg |
345 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| |||||| | | ||| | ||||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
13490 |
atggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaatcgctccatgttattcttatcattttgaaacctcttttcatg |
13585 |
T |
|
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Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 54 - 315
Target Start/End: Original strand, 268010 - 268267
Alignment:
| Q |
54 |
catgtactcataatatattatacatttctaactatttcgacatataaataactaatacttgtttaaaaacgtatataagaaaggtatttcccatttaacc |
153 |
Q |
| |
|
|||||||||| |||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||| |||| |||||| || ||||||| |
|
|
| T |
268010 |
catgtactcaaaatatattatacgtttctaactatttcgtcatataaacaactaatacttatttagaaacgtaaataaaaaaggttttagccatttatgg |
268109 |
T |
|
| Q |
154 |
tttaagatgagattattgggaaattgaagttgaagaaataaaatataaaagggaaaaataggatttaagtaaagttgggtaccgaggaggactatcatgg |
253 |
Q |
| |
|
||||||||| ||||| | | ||| ||| || || ||||||||| |||| || |||| | || |||||||||| ||||| | ||||| |||| |
|
|
| T |
268110 |
tttaagatggtattatcgaggaatagaaattaaataaataaaatgaaaaaagg-aaaacaagaattaagtaaagagcagtacc---cacgactagaatgg |
268205 |
T |
|
| Q |
254 |
tagccggacaagttagcagcctgggtcagagccaatttccatcgctccaacctctccatgtt |
315 |
Q |
| |
|
||||| |||||||||| ||| |||||||||||||| |||||| | | ||||| ||||||||| |
|
|
| T |
268206 |
tagccagacaagttagaagcttgggtcagagccaacttccattgatgcaaccgctccatgtt |
268267 |
T |
|
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Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 65 - 285
Target Start/End: Original strand, 28127333 - 28127559
Alignment:
| Q |
65 |
aatatattatacatttctaactatttcgacatataaataactaatacttgtttaaaaacgtatataag--aaaggtatttcccatttaacctttaagatg |
162 |
Q |
| |
|
|||| |||||||| ||| ||||||| |||||||||||| || |||||||||||||||| || |||| ||| | ||| | |||||| |||||||||| |
|
|
| T |
28127333 |
aatacattatacaactctgactattttgacatataaataccttatacttgtttaaaaacataaataaataaaaaatgttttctatttaagctttaagatg |
28127432 |
T |
|
| Q |
163 |
agattattgggaaattgaagttgaagaaataaaatataaa------ag-ggaaaaataggatttaagtaaagttgggtaccgaggaggactatcatggta |
255 |
Q |
| |
|
|| ||||||| ||| ||| || |||||| |||||||||| || || |||| | |||||||||| ||| ||||||| ||| |||| |||||| |
|
|
| T |
28127433 |
aggttattggttaatagaaattaaagaaagaaaatataaagaggcaagaggcaaaacaagatttaagtatagtagggtaccctgga---ctataatggta |
28127529 |
T |
|
| Q |
256 |
gccggacaagttagcagcctgggtcagagc |
285 |
Q |
| |
|
|||||||||||||||||| ||||| ||||| |
|
|
| T |
28127530 |
gccggacaagttagcagcttgggttagagc |
28127559 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 80 - 285
Target Start/End: Original strand, 28164048 - 28164243
Alignment:
| Q |
80 |
tctaactatttcgacatataaataactaatacttgtttaaaaacgtatataagaaaggtatttcccatttaacctttaagatgagattattgggaaattg |
179 |
Q |
| |
|
||||||||||| |||||||||||| || |||||||||||||||| || |||| || ||||| | |||||| |||||||||||| |||||||| ||| |
|
|
| T |
28164048 |
tctaactattttgacatataaatatcttatacttgtttaaaaacataaataaataaaatattttctatttaagctttaagatgaggttattggggaatat |
28164147 |
T |
|
| Q |
180 |
aagttgaagaaataaaatataaaagggaaaaataggatttaagtaaagttgggtaccgaggaggactatcatggtagccggacaagttagcagcctgggt |
279 |
Q |
| |
|
|| || || |||||||| ||||||| | |||||||||| || |||||| ||| |||| |||||||||||||||||||||||| ||||| |
|
|
| T |
28164148 |
aaattaaa-------aatataaagaggaaaaacaagatttaagtattgtaaggtaccctgga---ctataatggtagccggacaagttagcagcttgggt |
28164237 |
T |
|
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Target: chr8 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 29273628 - 29273673
Alignment:
| Q |
250 |
atggtagccggacaagttagcagcctgggtcagagccaatttccat |
295 |
Q |
| |
|
||||||||| |||||||||| ||| |||||||||||||| |||||| |
|
|
| T |
29273628 |
atggtagccagacaagttagaagcttgggtcagagccaacttccat |
29273673 |
T |
|
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