View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8027_low_1 (Length: 662)

Name: NF8027_low_1
Description: NF8027
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8027_low_1
NF8027_low_1
[»] chr8 (81 HSPs)
chr8 (171-648)||(31673621-31674101)
chr8 (111-295)||(25198264-25198437)
chr8 (105-295)||(25184999-25185178)
chr8 (182-295)||(40517776-40517888)
chr8 (96-293)||(24512127-24512313)
chr8 (175-295)||(12762871-12762990)
chr8 (96-295)||(40337149-40337337)
chr8 (105-288)||(41086945-41087115)
chr8 (101-295)||(57146-57329)
chr8 (96-360)||(37956082-37956331)
chr8 (170-295)||(36437525-36437649)
chr8 (172-295)||(26878686-26878808)
chr8 (96-295)||(10396188-10396374)
chr8 (170-295)||(31746363-31746487)
chr8 (170-295)||(45203782-45203906)
chr8 (170-294)||(38761317-38761440)
chr8 (170-281)||(2562701-2562812)
chr8 (170-281)||(14577624-14577734)
chr8 (173-295)||(36309554-36309675)
chr8 (103-271)||(39543642-39543802)
chr8 (93-295)||(38773306-38773498)
chr8 (172-294)||(45185226-45185347)
chr8 (190-283)||(885505-885597)
chr8 (170-390)||(24962224-24962447)
chr8 (111-294)||(37600846-37601019)
chr8 (170-294)||(30262497-30262620)
chr8 (96-295)||(37141686-37141873)
chr8 (172-295)||(7772538-7772660)
chr8 (95-281)||(38202964-38203139)
chr8 (96-258)||(38770181-38770333)
chr8 (175-293)||(5191509-5191626)
chr8 (171-281)||(14846893-14847002)
chr8 (191-293)||(24276517-24276618)
chr8 (170-295)||(1177114-1177238)
chr8 (105-293)||(1769408-1769584)
chr8 (103-258)||(16002717-16002862)
chr8 (172-295)||(17933730-17933853)
chr8 (187-271)||(45183843-45183926)
chr8 (170-292)||(25888619-25888740)
chr8 (177-365)||(43191365-43191552)
chr8 (170-295)||(3113491-3113615)
chr8 (189-295)||(12998646-12998756)
chr8 (175-295)||(34882699-34882818)
chr8 (194-281)||(23399749-23399835)
chr8 (170-293)||(31252615-31252737)
chr8 (171-281)||(7172244-7172353)
chr8 (170-271)||(40602023-40602123)
chr8 (170-391)||(43980441-43980665)
chr8 (170-291)||(22590399-22590519)
chr8 (182-255)||(35794778-35794851)
chr8 (94-278)||(40790747-40790919)
chr8 (171-270)||(14739454-14739552)
chr8 (194-281)||(23280699-23280785)
chr8 (173-248)||(44255480-44255555)
chr8 (218-295)||(14522302-14522379)
chr8 (182-248)||(34157953-34158019)
chr8 (182-291)||(41541585-41541692)
chr8 (218-283)||(33385318-33385382)
chr8 (170-295)||(35709057-35709181)
chr8 (226-295)||(40807969-40808037)
chr8 (172-228)||(14906627-14906683)
chr8 (103-241)||(16644047-16644175)
chr8 (209-295)||(45283444-45283528)
chr8 (176-258)||(12894198-12894280)
chr8 (170-215)||(14522641-14522686)
chr8 (171-256)||(34869855-34869940)
chr8 (194-281)||(2031264-2031350)
chr8 (226-293)||(14907213-14907279)
chr8 (174-248)||(3006785-3006859)
chr8 (96-170)||(4273980-4274054)
chr8 (312-362)||(5969827-5969876)
chr8 (312-362)||(13486974-13487023)
chr8 (312-362)||(31008359-31008408)
chr8 (312-362)||(41726182-41726231)
chr8 (312-365)||(3656087-3656139)
chr8 (312-361)||(27679099-27679147)
chr8 (309-361)||(57076-57128)
chr8 (309-361)||(14739600-14739652)
chr8 (96-148)||(16355785-16355837)
chr8 (92-152)||(34127552-34127612)
chr8 (309-365)||(40601924-40601980)
[»] chr4 (102 HSPs)
chr4 (10-295)||(43800672-43800956)
chr4 (102-292)||(5448628-5448807)
chr4 (93-295)||(25477182-25477373)
chr4 (96-281)||(16070391-16070565)
chr4 (96-293)||(20262353-20262539)
chr4 (96-293)||(52225979-52226165)
chr4 (170-295)||(30153180-30153303)
chr4 (170-294)||(33246455-33246578)
chr4 (96-295)||(39237546-39237738)
chr4 (95-295)||(22750799-22750988)
chr4 (96-364)||(51787731-51787991)
chr4 (96-258)||(46729266-46729417)
chr4 (114-295)||(24072745-24072915)
chr4 (170-295)||(41945730-41945853)
chr4 (93-293)||(52552470-52552659)
chr4 (170-294)||(32236855-32236978)
chr4 (170-365)||(38136379-38136572)
chr4 (171-294)||(5168004-5168126)
chr4 (170-293)||(5932910-5933032)
chr4 (170-293)||(20185615-20185737)
chr4 (170-288)||(29584918-29585035)
chr4 (171-281)||(43509107-43509215)
chr4 (172-372)||(22651490-22651693)
chr4 (171-295)||(37174976-37175102)
chr4 (174-295)||(37625082-37625202)
chr4 (170-282)||(45628045-45628155)
chr4 (172-295)||(20291366-20291487)
chr4 (187-294)||(39196992-39197098)
chr4 (100-258)||(50782742-50782890)
chr4 (174-281)||(54438538-54438644)
chr4 (170-295)||(13096499-13096623)
chr4 (96-291)||(48472456-48472641)
chr4 (170-295)||(56373301-56373425)
chr4 (170-295)||(10602167-10602287)
chr4 (189-293)||(41919997-41920100)
chr4 (170-294)||(14602611-14602736)
chr4 (171-258)||(34543727-34543814)
chr4 (189-295)||(7002226-7002331)
chr4 (170-295)||(19654452-19654576)
chr4 (127-295)||(20293734-20293895)
chr4 (170-295)||(52198685-52198809)
chr4 (174-283)||(52676048-52676157)
chr4 (170-258)||(28116498-28116586)
chr4 (189-293)||(40411302-40411405)
chr4 (175-291)||(51918617-51918728)
chr4 (113-250)||(5536474-5536601)
chr4 (170-248)||(12624720-12624798)
chr4 (172-258)||(31937385-31937471)
chr4 (170-295)||(31486512-31486636)
chr4 (183-293)||(20016560-20016667)
chr4 (190-281)||(41459631-41459721)
chr4 (186-294)||(20116490-20116598)
chr4 (189-294)||(21171767-21171871)
chr4 (189-258)||(26186748-26186817)
chr4 (189-258)||(31840139-31840208)
chr4 (183-295)||(39414273-39414382)
chr4 (182-258)||(5416862-5416938)
chr4 (172-295)||(26203156-26203278)
chr4 (196-295)||(56217010-56217108)
chr4 (187-293)||(32107886-32107991)
chr4 (204-288)||(20540029-20540111)
chr4 (171-295)||(44812564-44812687)
chr4 (182-258)||(52768892-52768968)
chr4 (189-292)||(34643438-34643539)
chr4 (189-295)||(10541214-10541319)
chr4 (222-295)||(54359759-54359831)
chr4 (170-273)||(54701269-54701368)
chr4 (208-294)||(726666-726751)
chr4 (208-294)||(754093-754178)
chr4 (173-227)||(3094209-3094263)
chr4 (202-295)||(21121023-21121115)
chr4 (175-250)||(18683536-18683609)
chr4 (170-258)||(20791951-20792039)
chr4 (185-248)||(30866695-30866758)
chr4 (209-361)||(31917440-31917593)
chr4 (208-258)||(30049759-30049809)
chr4 (94-156)||(50438922-50438984)
chr4 (309-390)||(12624862-12624943)
chr4 (209-258)||(26170260-26170309)
chr4 (194-255)||(36513306-36513367)
chr4 (107-152)||(54438481-54438526)
chr4 (96-175)||(40411671-40411751)
chr4 (227-295)||(49544991-49545058)
chr4 (104-152)||(56217112-56217160)
chr4 (309-360)||(30050151-30050202)
chr4 (189-291)||(45079773-45079873)
chr4 (315-362)||(46729477-46729524)
chr4 (312-362)||(11792604-11792653)
chr4 (312-362)||(11861271-11861320)
chr4 (312-362)||(23611361-23611410)
chr4 (306-372)||(26203294-26203360)
chr4 (309-383)||(52676187-52676261)
chr4 (226-295)||(3113446-3113514)
chr4 (121-170)||(20116437-20116486)
chr4 (306-362)||(20792154-20792210)
chr4 (225-281)||(3094409-3094464)
chr4 (358-390)||(5448622-5448654)
chr4 (222-258)||(25841983-25842019)
chr4 (230-278)||(28175894-28175941)
chr4 (96-152)||(29584854-29584910)
chr4 (196-248)||(31552190-31552242)
chr4 (306-362)||(52552398-52552454)
[»] chr7 (72 HSPs)
chr7 (96-390)||(20123410-20123692)
chr7 (96-295)||(1324668-1324856)
chr7 (96-295)||(48767524-48767713)
chr7 (96-295)||(4089457-4089645)
chr7 (170-295)||(2276534-2276658)
chr7 (171-295)||(21388267-21388390)
chr7 (96-295)||(36726131-36726318)
chr7 (106-281)||(37673707-37673871)
chr7 (170-294)||(25750392-25750515)
chr7 (102-281)||(36116287-36116455)
chr7 (172-293)||(21809606-21809726)
chr7 (170-294)||(10685109-10685232)
chr7 (96-295)||(49100631-49100819)
chr7 (170-295)||(19236024-19236148)
chr7 (170-294)||(37048059-37048181)
chr7 (170-295)||(6376089-6376214)
chr7 (172-278)||(43601139-43601243)
chr7 (170-258)||(43465136-43465224)
chr7 (170-293)||(33181319-33181441)
chr7 (172-294)||(48610094-48610215)
chr7 (103-293)||(35128353-35128530)
chr7 (171-295)||(42983571-42983694)
chr7 (170-281)||(5334366-5334476)
chr7 (175-258)||(31373691-31373774)
chr7 (171-281)||(40263736-40263845)
chr7 (170-295)||(18121999-18122123)
chr7 (172-293)||(21801015-21801135)
chr7 (170-295)||(37491576-37491700)
chr7 (170-294)||(46783800-46783922)
chr7 (170-281)||(48193639-48193749)
chr7 (190-293)||(10408527-10408629)
chr7 (172-271)||(29636022-29636119)
chr7 (170-292)||(21392853-21392974)
chr7 (183-288)||(27213524-27213628)
chr7 (175-295)||(28663784-28663903)
chr7 (189-295)||(27162860-27162966)
chr7 (172-295)||(40740976-40741100)
chr7 (189-258)||(21752571-21752640)
chr7 (170-295)||(26632870-26632994)
chr7 (196-283)||(24700665-24700751)
chr7 (182-281)||(26200939-26201037)
chr7 (170-293)||(27170036-27170157)
chr7 (189-295)||(23876080-23876185)
chr7 (190-295)||(28038845-28038950)
chr7 (175-281)||(42993159-42993264)
chr7 (203-295)||(13907700-13907791)
chr7 (171-233)||(40211295-40211357)
chr7 (94-281)||(29723419-29723595)
chr7 (206-295)||(37136241-37136329)
chr7 (189-241)||(47458196-47458248)
chr7 (175-258)||(35960407-35960490)
chr7 (172-258)||(44648708-44648796)
chr7 (93-156)||(25098993-25099056)
chr7 (232-281)||(10593915-10593964)
chr7 (202-258)||(2409906-2409962)
chr7 (174-237)||(10595113-10595174)
chr7 (95-138)||(33181114-33181157)
chr7 (314-365)||(36858365-36858415)
chr7 (218-281)||(38729662-38729724)
chr7 (209-295)||(21759783-21759868)
chr7 (312-390)||(25098244-25098322)
chr7 (312-362)||(29983465-29983514)
chr7 (309-390)||(5333757-5333838)
chr7 (170-227)||(41672591-41672648)
chr7 (314-362)||(2276465-2276513)
chr7 (189-241)||(4068442-4068494)
chr7 (309-361)||(10685250-10685302)
chr7 (104-156)||(18122127-18122179)
chr7 (218-250)||(19477413-19477445)
chr7 (96-152)||(20124148-20124204)
chr7 (96-152)||(21388202-21388258)
chr7 (314-366)||(47458069-47458121)
[»] chr3 (90 HSPs)
chr3 (95-295)||(30475999-30476188)
chr3 (107-295)||(40645644-40645821)
chr3 (96-295)||(12077702-12077890)
chr3 (108-293)||(41727199-41727373)
chr3 (170-283)||(46435702-46435813)
chr3 (170-295)||(26517174-26517298)
chr3 (170-293)||(51263105-51263227)
chr3 (170-295)||(50363050-50363174)
chr3 (170-294)||(14645849-14645972)
chr3 (96-295)||(29676698-29676886)
chr3 (171-295)||(31819430-31819553)
chr3 (96-295)||(50524935-50525123)
chr3 (96-295)||(27638036-27638224)
chr3 (96-281)||(46048480-46048655)
chr3 (170-295)||(41308735-41308859)
chr3 (174-295)||(42891446-42891566)
chr3 (172-295)||(44083652-44083774)
chr3 (177-295)||(35055816-35055933)
chr3 (174-295)||(13084317-13084437)
chr3 (170-295)||(20945259-20945383)
chr3 (170-295)||(26043042-26043164)
chr3 (170-258)||(39617245-39617333)
chr3 (175-295)||(41739932-41740051)
chr3 (170-294)||(11388144-11388269)
chr3 (175-281)||(28477413-28477518)
chr3 (170-295)||(33287889-33288013)
chr3 (170-258)||(26121355-26121443)
chr3 (172-295)||(831319-831441)
chr3 (194-295)||(44338128-44338228)
chr3 (182-295)||(48309479-48309591)
chr3 (96-292)||(50092627-50092812)
chr3 (176-295)||(21932955-21933073)
chr3 (94-255)||(29645314-29645466)
chr3 (96-295)||(43187060-43187240)
chr3 (170-271)||(29611857-29611957)
chr3 (170-295)||(52325462-52325586)
chr3 (189-293)||(22659622-22659725)
chr3 (170-286)||(27047146-27047261)
chr3 (170-278)||(41825113-41825220)
chr3 (172-295)||(42010893-42011015)
chr3 (170-283)||(33411946-33412056)
chr3 (189-294)||(28229207-28229311)
chr3 (170-294)||(35765604-35765729)
chr3 (170-295)||(48903042-48903166)
chr3 (172-248)||(25750552-25750628)
chr3 (170-258)||(26243495-26243583)
chr3 (182-295)||(31474459-31474571)
chr3 (182-255)||(54425954-54426027)
chr3 (174-258)||(37729024-37729108)
chr3 (171-295)||(41543566-41543689)
chr3 (220-295)||(5504534-5504608)
chr3 (170-233)||(11140728-11140791)
chr3 (196-295)||(35145280-35145378)
chr3 (96-170)||(5504615-5504689)
chr3 (173-279)||(28243785-28243890)
chr3 (194-295)||(2421131-2421231)
chr3 (95-255)||(26998852-26999003)
chr3 (197-294)||(31826242-31826338)
chr3 (170-295)||(48901476-48901600)
chr3 (171-259)||(11344582-11344669)
chr3 (190-294)||(28228222-28228325)
chr3 (170-230)||(31531448-31531508)
chr3 (232-295)||(31531087-31531149)
chr3 (174-281)||(29349401-29349511)
chr3 (182-258)||(21864333-21864408)
chr3 (172-294)||(34055824-34055943)
chr3 (176-271)||(39931910-39932004)
chr3 (172-295)||(48581343-48581465)
chr3 (175-294)||(49000480-49000597)
chr3 (190-284)||(383649-383742)
chr3 (315-365)||(26999214-26999264)
chr3 (312-365)||(33987058-33987110)
chr3 (230-295)||(11396804-11396870)
chr3 (309-361)||(12077630-12077682)
chr3 (202-250)||(44647831-44647879)
chr3 (117-152)||(35145220-35145255)
chr3 (170-281)||(54555897-54556007)
chr3 (312-362)||(11676084-11676133)
chr3 (312-362)||(30464910-30464959)
chr3 (306-364)||(33411862-33411920)
chr3 (312-362)||(33635113-33635162)
chr3 (312-362)||(37599710-37599759)
chr3 (227-281)||(46202288-46202341)
chr3 (116-170)||(53717599-53717653)
chr3 (170-230)||(11393945-11394005)
chr3 (309-365)||(13084245-13084301)
chr3 (314-362)||(14645777-14645825)
chr3 (96-152)||(28477336-28477392)
chr3 (175-235)||(31650683-31650743)
chr3 (175-243)||(48213653-48213721)
[»] chr2 (92 HSPs)
chr2 (96-295)||(8065029-8065217)
chr2 (95-295)||(9718129-9718318)
chr2 (96-295)||(44424555-44424743)
chr2 (102-295)||(41665677-41665858)
chr2 (171-295)||(11459178-11459301)
chr2 (96-365)||(3237681-3237937)
chr2 (170-295)||(14420701-14420824)
chr2 (170-295)||(27297601-27297725)
chr2 (171-295)||(375302-375425)
chr2 (92-295)||(15851487-15851679)
chr2 (171-295)||(37355061-37355184)
chr2 (95-295)||(17250918-17251107)
chr2 (170-271)||(24774889-24774989)
chr2 (171-295)||(7255626-7255749)
chr2 (170-295)||(247684-247808)
chr2 (132-290)||(38982031-38982188)
chr2 (107-282)||(35178763-35178927)
chr2 (170-295)||(28264911-28265032)
chr2 (170-281)||(43650058-43650168)
chr2 (170-293)||(45214749-45214871)
chr2 (95-295)||(28733784-28733971)
chr2 (170-295)||(17663648-17663772)
chr2 (103-295)||(31644399-31644580)
chr2 (186-279)||(34330042-34330134)
chr2 (174-295)||(41865744-41865863)
chr2 (170-293)||(2131781-2131903)
chr2 (172-295)||(38449671-38449793)
chr2 (170-295)||(11071692-11071815)
chr2 (101-295)||(13534380-13534553)
chr2 (189-295)||(40346038-40346143)
chr2 (174-294)||(1246370-1246490)
chr2 (174-281)||(23464711-23464817)
chr2 (174-295)||(4758054-4758174)
chr2 (170-295)||(20362007-20362130)
chr2 (170-295)||(21012877-21013001)
chr2 (190-295)||(25731143-25731247)
chr2 (170-271)||(44421473-44421573)
chr2 (177-362)||(3645354-3645538)
chr2 (174-258)||(26512099-26512183)
chr2 (171-294)||(3326749-3326871)
chr2 (170-293)||(7278572-7278694)
chr2 (171-282)||(35241678-35241788)
chr2 (169-295)||(2521257-2521382)
chr2 (189-255)||(45150732-45150798)
chr2 (173-258)||(14527650-14527735)
chr2 (170-291)||(43709943-43710063)
chr2 (170-241)||(4033605-4033676)
chr2 (170-295)||(6275524-6275648)
chr2 (217-293)||(2048789-2048864)
chr2 (194-293)||(36174751-36174849)
chr2 (170-294)||(42250837-42250957)
chr2 (196-258)||(43119362-43119424)
chr2 (172-233)||(44274685-44274746)
chr2 (209-281)||(2917072-2917143)
chr2 (170-230)||(4398545-4398605)
chr2 (204-272)||(12498248-12498314)
chr2 (189-281)||(28190641-28190732)
chr2 (172-295)||(7257895-7258017)
chr2 (172-271)||(8393234-8393332)
chr2 (170-281)||(16808794-16808904)
chr2 (170-281)||(16848075-16848185)
chr2 (172-271)||(36846781-36846879)
chr2 (172-271)||(44462562-44462660)
chr2 (205-295)||(20427149-20427237)
chr2 (232-293)||(44274478-44274538)
chr2 (172-248)||(6597882-6597957)
chr2 (170-291)||(8383934-8384053)
chr2 (171-258)||(29971296-29971382)
chr2 (190-244)||(31583638-31583692)
chr2 (170-255)||(35453731-35453814)
chr2 (315-364)||(11459326-11459375)
chr2 (189-250)||(12417619-12417680)
chr2 (189-250)||(12429679-12429740)
chr2 (172-241)||(15578091-15578160)
chr2 (312-365)||(24128983-24129035)
chr2 (309-365)||(534631-534687)
chr2 (222-294)||(6408705-6408776)
chr2 (192-282)||(11121259-11121347)
chr2 (309-360)||(7278501-7278552)
chr2 (170-281)||(44101396-44101506)
chr2 (189-255)||(13477029-13477095)
chr2 (223-293)||(20360609-20360678)
chr2 (230-295)||(534549-534613)
chr2 (309-390)||(17663790-17663871)
chr2 (309-390)||(20362148-20362229)
chr2 (309-362)||(27749633-27749686)
chr2 (189-250)||(43638822-43638883)
chr2 (309-365)||(4033992-4034048)
chr2 (96-152)||(27297537-27297593)
chr2 (96-152)||(41865676-41865732)
chr2 (96-152)||(44421409-44421465)
chr2 (309-365)||(44424759-44424815)
[»] chr1 (93 HSPs)
chr1 (96-295)||(5085045-5085233)
chr1 (101-295)||(48721824-48722008)
chr1 (170-391)||(51996978-51997203)
chr1 (96-295)||(33231799-33231987)
chr1 (170-360)||(46495332-46495525)
chr1 (96-292)||(3143362-3143547)
chr1 (170-293)||(44335312-44335438)
chr1 (96-295)||(44652817-44653002)
chr1 (96-294)||(29140611-29140798)
chr1 (187-293)||(4817864-4817969)
chr1 (187-293)||(4829664-4829769)
chr1 (96-281)||(16582492-16582666)
chr1 (102-292)||(47643508-47643684)
chr1 (101-293)||(32047406-32047586)
chr1 (170-281)||(46591125-46591235)
chr1 (103-295)||(9675623-9675804)
chr1 (96-295)||(5321979-5322167)
chr1 (183-295)||(13145454-13145565)
chr1 (170-295)||(28723607-28723733)
chr1 (170-281)||(8984631-8984741)
chr1 (175-295)||(51390493-51390609)
chr1 (182-295)||(25063245-25063357)
chr1 (96-295)||(23982548-23982736)
chr1 (175-295)||(32152186-32152305)
chr1 (170-281)||(47070931-47071041)
chr1 (106-294)||(30336028-30336205)
chr1 (177-281)||(2342934-2343037)
chr1 (102-293)||(8877737-8877917)
chr1 (170-294)||(15911509-15911632)
chr1 (171-258)||(31305342-31305429)
chr1 (177-295)||(32144341-32144458)
chr1 (96-281)||(34696853-34697027)
chr1 (170-271)||(13723458-13723558)
chr1 (170-295)||(15512737-15512861)
chr1 (170-295)||(20564798-20564922)
chr1 (170-295)||(28948920-28949044)
chr1 (170-295)||(30898519-30898643)
chr1 (171-295)||(16395505-16395627)
chr1 (170-294)||(35365941-35366064)
chr1 (170-258)||(47754634-47754722)
chr1 (170-281)||(15179433-15179543)
chr1 (171-258)||(24415024-24415111)
chr1 (170-293)||(25269400-25269522)
chr1 (170-281)||(31807942-31808052)
chr1 (95-293)||(36084928-36085115)
chr1 (172-258)||(34102361-34102447)
chr1 (103-247)||(35001273-35001407)
chr1 (182-295)||(52141131-52141243)
chr1 (175-295)||(4813418-4813537)
chr1 (170-258)||(38680498-38680586)
chr1 (175-257)||(50692437-50692520)
chr1 (170-294)||(25258353-25258477)
chr1 (94-295)||(3831006-3831194)
chr1 (119-281)||(44395517-44395668)
chr1 (189-291)||(15457775-15457876)
chr1 (182-295)||(291591-291703)
chr1 (210-295)||(34012550-34012634)
chr1 (170-243)||(41737148-41737221)
chr1 (171-258)||(5852843-5852928)
chr1 (91-170)||(10160673-10160752)
chr1 (174-293)||(27531126-27531244)
chr1 (175-291)||(13352862-13352976)
chr1 (115-295)||(28334177-28334340)
chr1 (170-294)||(3072162-3072283)
chr1 (190-295)||(4081969-4082073)
chr1 (194-258)||(10842374-10842438)
chr1 (182-274)||(34331910-34332001)
chr1 (96-167)||(29302522-29302593)
chr1 (170-271)||(3143716-3143814)
chr1 (170-236)||(44163255-44163321)
chr1 (170-281)||(40261618-40261727)
chr1 (222-295)||(46732916-46732988)
chr1 (175-295)||(28679778-28679896)
chr1 (218-258)||(10160783-10160823)
chr1 (96-156)||(12845070-12845130)
chr1 (309-363)||(24415154-24415208)
chr1 (315-361)||(44395709-44395755)
chr1 (183-248)||(40205587-40205652)
chr1 (306-362)||(5321907-5321963)
chr1 (172-220)||(9684748-9684796)
chr1 (306-362)||(25063374-25063430)
chr1 (231-294)||(6282688-6282750)
chr1 (309-392)||(15512636-15512719)
chr1 (309-392)||(28948819-28948902)
chr1 (195-258)||(32715567-32715629)
chr1 (202-281)||(40612929-40613007)
chr1 (312-362)||(9293852-9293901)
chr1 (315-365)||(9684598-9684648)
chr1 (312-390)||(12844000-12844078)
chr1 (312-362)||(44258000-44258049)
chr1 (309-362)||(5084974-5085027)
chr1 (175-236)||(6282502-6282563)
chr1 (172-268)||(23393498-23393590)
[»] chr6 (45 HSPs)
chr6 (170-295)||(1763837-1763961)
chr6 (95-281)||(5895690-5895865)
chr6 (170-295)||(31945870-31945994)
chr6 (171-295)||(30465926-30466049)
chr6 (170-295)||(12514540-12514667)
chr6 (170-295)||(22410800-22410925)
chr6 (182-294)||(34513177-34513288)
chr6 (174-293)||(11302883-11303001)
chr6 (171-281)||(15981819-15981928)
chr6 (171-294)||(9461318-9461440)
chr6 (174-268)||(16327151-16327244)
chr6 (170-268)||(16350545-16350642)
chr6 (175-295)||(33607384-33607503)
chr6 (174-295)||(28238271-28238392)
chr6 (209-294)||(3729485-3729569)
chr6 (170-295)||(19838955-19839079)
chr6 (187-295)||(6791417-6791524)
chr6 (170-258)||(10669268-10669356)
chr6 (96-258)||(5084532-5084687)
chr6 (171-241)||(3729414-3729484)
chr6 (101-295)||(16186538-16186717)
chr6 (174-281)||(197423-197529)
chr6 (177-295)||(3887900-3888017)
chr6 (174-281)||(31152960-31153066)
chr6 (170-281)||(31536036-31536146)
chr6 (175-295)||(31780153-31780273)
chr6 (175-295)||(5457216-5457335)
chr6 (209-277)||(12503589-12503656)
chr6 (230-295)||(30248946-30249010)
chr6 (205-258)||(31487058-31487111)
chr6 (174-258)||(9428195-9428279)
chr6 (190-268)||(20523016-20523093)
chr6 (175-255)||(12514752-12514832)
chr6 (218-294)||(31039218-31039293)
chr6 (189-247)||(1514233-1514291)
chr6 (170-220)||(4250690-4250740)
chr6 (204-294)||(9941080-9941169)
chr6 (317-390)||(22410701-22410774)
chr6 (202-258)||(6418958-6419014)
chr6 (176-228)||(30248593-30248645)
chr6 (309-391)||(19839097-19839179)
chr6 (312-362)||(24068021-24068070)
chr6 (217-250)||(5876957-5876990)
chr6 (227-271)||(11082152-11082195)
chr6 (307-347)||(31481878-31481918)
[»] chr5 (74 HSPs)
chr5 (96-293)||(10933966-10934152)
chr5 (96-295)||(5845136-5845324)
chr5 (96-295)||(21574837-21575024)
chr5 (96-295)||(25017630-25017818)
chr5 (170-295)||(15898419-15898543)
chr5 (174-295)||(27587866-27587986)
chr5 (96-295)||(34877626-34877814)
chr5 (174-295)||(3558983-3559103)
chr5 (170-295)||(29866213-29866337)
chr5 (96-295)||(4738590-4738778)
chr5 (96-295)||(36177252-36177440)
chr5 (96-295)||(3247230-3247418)
chr5 (170-294)||(10523231-10523354)
chr5 (170-294)||(20946111-20946234)
chr5 (96-293)||(4857452-4857642)
chr5 (171-295)||(12895165-12895288)
chr5 (196-295)||(38972083-38972181)
chr5 (96-281)||(27798116-27798290)
chr5 (190-362)||(30317793-30317963)
chr5 (177-362)||(30347968-30348150)
chr5 (110-295)||(40979168-40979342)
chr5 (170-295)||(35568961-35569085)
chr5 (170-295)||(36347557-36347681)
chr5 (170-295)||(39690442-39690566)
chr5 (170-294)||(600789-600912)
chr5 (183-295)||(5151157-5151267)
chr5 (101-250)||(3631120-3631257)
chr5 (170-280)||(43060482-43060590)
chr5 (170-295)||(16071-16195)
chr5 (170-295)||(42644434-42644558)
chr5 (189-293)||(9375597-9375700)
chr5 (170-294)||(27642526-27642649)
chr5 (174-280)||(43454010-43454115)
chr5 (174-295)||(9946314-9946434)
chr5 (208-295)||(8717915-8718001)
chr5 (170-281)||(11980740-11980850)
chr5 (190-293)||(16496480-16496582)
chr5 (170-248)||(4745151-4745229)
chr5 (171-293)||(25690644-25690768)
chr5 (170-295)||(21912144-21912268)
chr5 (187-295)||(36750732-36750839)
chr5 (170-258)||(41521212-41521300)
chr5 (96-155)||(27925337-27925396)
chr5 (196-281)||(34676171-34676255)
chr5 (203-295)||(32401410-32401501)
chr5 (172-243)||(19281498-19281569)
chr5 (187-268)||(731935-732016)
chr5 (190-255)||(19089016-19089081)
chr5 (207-295)||(7736041-7736128)
chr5 (172-255)||(24781264-24781346)
chr5 (183-281)||(5764193-5764290)
chr5 (171-258)||(18729613-18729704)
chr5 (170-235)||(31642484-31642548)
chr5 (174-294)||(16969402-16969521)
chr5 (202-281)||(556057-556135)
chr5 (171-238)||(15967124-15967191)
chr5 (306-359)||(18032758-18032811)
chr5 (315-363)||(34877838-34877886)
chr5 (235-294)||(31641149-31641207)
chr5 (309-392)||(39690341-39690424)
chr5 (170-220)||(129634-129684)
chr5 (170-224)||(7510630-7510683)
chr5 (312-362)||(8760928-8760977)
chr5 (189-295)||(10656633-10656737)
chr5 (183-281)||(14044468-14044565)
chr5 (182-224)||(32067864-32067906)
chr5 (230-291)||(32068070-32068131)
chr5 (175-281)||(457800-457907)
chr5 (204-245)||(3529935-3529976)
chr5 (312-361)||(6514306-6514354)
chr5 (309-362)||(21912286-21912339)
chr5 (309-362)||(27925439-27925492)
chr5 (309-365)||(3631000-3631056)
chr5 (309-365)||(36177459-36177515)
[»] scaffold1091 (1 HSPs)
scaffold1091 (170-295)||(1870-1994)
[»] scaffold0699 (1 HSPs)
scaffold0699 (172-278)||(7604-7708)
[»] scaffold0012 (1 HSPs)
scaffold0012 (182-281)||(99788-99886)
[»] scaffold0182 (3 HSPs)
scaffold0182 (170-278)||(22084-22191)
scaffold0182 (189-249)||(18732-18792)
scaffold0182 (96-143)||(22025-22072)
[»] scaffold0005 (1 HSPs)
scaffold0005 (170-294)||(214642-214767)
[»] scaffold0038 (1 HSPs)
scaffold0038 (174-295)||(38433-38554)
[»] scaffold0013 (2 HSPs)
scaffold0013 (172-281)||(61253-61361)
scaffold0013 (172-295)||(49162-49285)
[»] scaffold0009 (1 HSPs)
scaffold0009 (218-294)||(25771-25845)
[»] scaffold0166 (1 HSPs)
scaffold0166 (172-255)||(23647-23729)
[»] scaffold0121 (1 HSPs)
scaffold0121 (96-153)||(24095-24152)
[»] scaffold0176 (1 HSPs)
scaffold0176 (232-281)||(20100-20148)
[»] scaffold0116 (1 HSPs)
scaffold0116 (190-279)||(5866-5954)
[»] scaffold0070 (1 HSPs)
scaffold0070 (312-362)||(12951-13000)


Alignment Details
Target: chr8 (Bit Score: 316; Significance: 1e-178; HSPs: 81)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 171 - 648
Target Start/End: Original strand, 31673621 - 31674101
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagt 270  Q
    |||||||||| |||| | |||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  31673621 gtgtaattaatgtgtttattttgtatgttaatattaccaaattatcctttgtttgtatgtgtattaaatttgactattcaaatttcaatgacaggttagt 31673720  T
Q  271 aatattaattaagagtatgtttaggnnnnnnnnnnt----gtatcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatga 366  Q
    | ||||||||||| |||||||||||          |    |||||||||||||| |||| || ||||||||||||||||||| |||||||||||  |||     
T  31673721 agtattaattaagggtatgtttaggaaaagaataataaatgtatcttgtaatttgaaaaagggtttacattgaaggataaaagtaaaatcaaattaatgg 31673820  T
Q  367 ctacattaagggacggagcgagtataaaagagtatgttgccaaagtcaaagttgtagcaattaattaacaaattattaagcttaactagtcactactacg 466  Q
    ||||      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31673821 ctac------ggacggagcgagtataaaagagtatgttgccaaagtcaaagttgtagcaattaattaacaaattattaagcttaactagtcactactacg 31673914  T
Q  467 ta----ataggaatttttgg-cttatatgccgtcccacgaatagacatgcaagtatgagtatatgctatgtaagattaaccccaagtgatctaaaaatga 561  Q
    ||    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31673915 tacgtaatagggatttttgggcttatatgccgtcccacgaatagacatgcaagtatgagtatatgctatgtaagattaaccccaagtgatctaaaaatga 31674014  T
Q  562 aatcatagaatttgtagtttaatttgtggaaacaacgttgtaaaattgcaatggttgatggaaaaaatgcatctgcgcaacatatgt 648  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31674015 aatcatagaatttgtagtttaatttgtggaaacaacgttgtaaaattgcaatggttgatggaaaaaatgcatctgcacaacatatgt 31674101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 111 - 295
Target Start/End: Original strand, 25198264 - 25198437
Alignment:
Q  111 ttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttagtattaccaa 210  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||| |||          |||||||||| |||| |||||||||||||| |||||||||    
T  25198264 ttaatgtaggcatccattgcctttttcacatttcttaagaaaagttgtca----------gtgtaattaatgtgtttgttttgtgtgttaatattaccaa 25198353  T
Q  211 attgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||| || ||||||||| ||||||||| | |||||||||||    
T  25198354 attgtcctttgtttgtatgtgtataaaatttgacttttcatatttcaa-gataagttagtagtattaattaggggtatgtttagg 25198437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 105 - 295
Target Start/End: Original strand, 25184999 - 25185178
Alignment:
Q  105 cgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttagtat 204  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||          |||||| ||| ||||||||||||||||||| |||    
T  25184999 cgtcccttaatgtatgcacccattgcctttttcacatttcttaagaaaagttgtca----------gtgtaactaatgtgtctgttttgtgtgttaatat 25185088  T
Q  205 taccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||| |||||||| ||||||||||||||||||||||||| ||||||| ||||||| || ||| ||||| ||||||||| | |||||||||||    
T  25185089 tacgaaattgtcatttgtttgtatgtgtattaaatttgtcttttcatatttcaa-gataagatagtagtattaattaggggtatgtttagg 25185178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 182 - 295
Target Start/End: Original strand, 40517776 - 40517888
Alignment:
Q  182 gtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||    
T  40517776 gtgtctgttttgtgtgttaatattaccaaattgtcctttgtttgtatgtgtattaaatttgactttttaaatttcaa-gacaagttagtagtattaatta 40517874  T
Q  282 agagtatgtttagg 295  Q
     | |||||||||||    
T  40517875 ggggtatgtttagg 40517888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 96 - 293
Target Start/End: Complemental strand, 24512313 - 24512127
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    ||||||||||||||||||||||||||| |||||  ||||||||||||| ||||||||  || |||          |||||||||| ||||||||||||||    
T  24512313 tacttcctccgtcccttaatgtaggcatccattatctttttcacattttttaagaaaatttgtca----------gtgtaattaatgtgtctgttttgtg 24512224  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgttta 293  Q
    ||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||| || ||  ||||| ||||||||| | |||||||||    
T  24512223 tgttaatattatcaaattgtcttttgtttgtatgtgtattaaatttgacttttcatatttcaa-gataaaatagtagtattaattaggggtatgttta 24512127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 175 - 295
Target Start/End: Original strand, 12762871 - 12762990
Alignment:
Q  175 aattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaata 274  Q
    |||||| |||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  12762871 aattaatgtgtctattttgtgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaagttagtaata 12762969  T
Q  275 ttaattaagagtatgtttagg 295  Q
    ||||||| | |||| ||||||    
T  12762970 ttaattaggggtatctttagg 12762990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 96 - 295
Target Start/End: Complemental strand, 40337337 - 40337149
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||| ||| |||          || ||||||| |||| ||||||||     
T  40337337 tactccctccgtcccttaatgtaggcatccattgtctttttcacatttcttatgaaaagttatca----------gtataattaatgtgtatgttttgta 40337248  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| |||||| ||||||||||||||||||||||||||| || ||||||||||| ||||||| |||||| || || ||||||||||| |||||||||||    
T  40337247 tgttaatattacaaaattgtcctttgtttgtatgtgtatttaaattgacttttcatatttcaa-gacaagataatagtattaattaagggtatgtttagg 40337149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 105 - 288
Target Start/End: Original strand, 41086945 - 41087115
Alignment:
Q  105 cgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttagtat 204  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||| || |||          |||||||||| ||||||| ||||||||||| |||    
T  41086945 cgtcccttaatgtag-cacccattgcctttt-cacatttcttaagaaatattgtca----------gtgtaattaatgtgtctgatttgtgtgttaatat 41087032  T
Q  205 taccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtat 288  Q
    || |||||| ||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||| ||||||||||| ||||    
T  41087033 tatcaaattttcctttgtttgtatgtgtattaaatttgatttttcatatttcaa-gacaagttagtagtattaattaagggtat 41087115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 101 - 295
Target Start/End: Complemental strand, 57329 - 57146
Alignment:
Q  101 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgtta 200  Q
    ||||||||||||||| |||||||  ||||  ||||||||||||||||||||| ||| ||           |||||||||| |||||||||||||||||||    
T  57329 cctccgtcccttaatataggcacttattgtttttttcacatttcttaagaaaagttgtcg----------gtgtaattaatgtgtctgttttgtgtgtta 57240  T
Q  201 gtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
     |||||| ||||||| |||| ||||||||||||||||||||||||||||| ||||||| |||||| || || ||||||||||| |||||||||||    
T  57239 atattacgaaattgttctttatttgtatgtgtattaaatttgacttttcatatttcaa-gacaagataatagtattaattaagggtatgtttagg 57146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 96 - 360
Target Start/End: Original strand, 37956082 - 37956331
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| |||||||||||||||||||| ||| |||| |||||||||||||||||||||| ||| |||          |||||||||| ||||||||||||||    
T  37956082 tactccctccgtcccttaatgtaggtacc-attgtctttttcacatttcttaagaaaagttgtca----------gtgtaattaatgtgtctgttttgtg 37956170  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| |||||| || ||||||||||||||||||| ||||| ||||||||||||| ||||||| |||||| || |||||||||||| | ||||||||| |    
T  37956171 tgttaatattacgaatttgtcctttgtttgtatgtatattagatttgacttttcatatttcaa-gacaagataataatattaattagg-gtatgtttacg 37956268  T
Q  296 nnnnnnnnnntgtatcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaat 360  Q
              || || | ||||||||||||||| |||||||| | ||| ||||||||||||||||    
T  37956269 aaaaaaaa--tgcatttagtaatttaaaaaggggtttacatttagggacaaaaataaaatcaaat 37956331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 36437525 - 36437649
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| |||||| |||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  36437525 agtgcaattaatgtgtctattttgtgtgttaacattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaagttag 36437623  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||||| ||| | |||||||||||    
T  36437624 tagtattagttaggggtatgtttagg 36437649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 172 - 295
Target Start/End: Complemental strand, 26878808 - 26878686
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagta 271  Q
    ||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| || ||||||| || |||||||||    
T  26878808 tgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttgtttgtatgtatattaaatttgactttacatatttcaa-gataagttagta 26878710  T
Q  272 atattaattaagagtatgtttagg 295  Q
     ||||||||| | |||||||||||    
T  26878709 gtattaattaggggtatgtttagg 26878686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 96 - 295
Target Start/End: Complemental strand, 10396374 - 10396188
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| ||||||||||||| |||| ||||||||| | |||||||||||| |||||||| ||| |||||||||||||            ||| |||||||||    
T  10396374 tactccctccgtcccttattgtatgcacccatttcatttttcacatttattaagaaaagttgtcaatgtaattaa------------tgtttgttttgtg 10396287  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| |||||| |||||||| ||||||||||||||||||||||||||||||||  ||||||| |||||| || |||||||||||| |  ||||||||||    
T  10396286 tgttaatattacgaaattgtcatttgtttgtatgtgtattaaatttgacttttcgtatttcaa-gacaagataataatattaattagggatatgtttagg 10396188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 31746487 - 31746363
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| |||||| |||||| |||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||| | ||||||||    
T  31746487 agtgcaattaatgtgtctattttgtgtgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaaag-caagttag 31746389  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||||||||| | |||||||||||    
T  31746388 tattattaattaggggtatgtttagg 31746363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 45203782 - 45203906
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| |||||| |||||| |||||| ||||| ||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||    
T  45203782 agtgcaattaatgtgtctattttgtatgttaatattaccaacttgtcctttgtttgtatgcgtattaaatttgacttttcatatttcaa-gacaagttag 45203880  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||||||||| | |||||||||||    
T  45203881 tagtattaattaggggtatgtttagg 45203906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 38761440 - 38761317
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||||||||||||||||||| |||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| |||    
T  38761440 agtgtaattaatgtgtctgttttgtgtgttaatattatgaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaagatag 38761342  T
Q  270 taatattaattaagagtatgtttag 294  Q
    || ||||||||| |  |||||||||    
T  38761341 tagtattaattagggatatgtttag 38761317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 2562812 - 2562701
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||| | | |||||| |||    
T  2562812 agtgtaattaatgtgtctgttttgtatgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcatattactaagacaagatag 2562713  T
Q  270 taatattaatta 281  Q
    || |||||||||    
T  2562712 tagtattaatta 2562701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 14577734 - 14577624
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||||| |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||||||    
T  14577734 agtgtaattaatgtgtctattttgtttgttaatattaccaaattgtactttgtttgtatgtgtattaaatttgatttttcatatttcaa-gacaagttag 14577636  T
Q  270 taatattaatta 281  Q
    || |||||||||    
T  14577635 tagtattaatta 14577624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 36309675 - 36309554
Alignment:
Q  173 gtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaa 272  Q
    |||||||| |||||| |||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||| |||| || ||||||||||||     
T  36309675 gtaattaatgtgtctattttgtgtgttaatattatcaaattgtcatttgtttgtatgtgtattaaatttgacttttcatattttaa-gacaagttagtat 36309577  T
Q  273 tattaattaagagtatgtttagg 295  Q
    ||||||||| |  ||||||||||    
T  36309576 tattaattagggttatgtttagg 36309554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 103 - 271
Target Start/End: Complemental strand, 39543802 - 39543642
Alignment:
Q  103 tccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttagt 202  Q
    ||||||| |||||||||||||| ||||||||||||| ||||||||||||||||| ||           |||||||||| |||||||||||||| |||| |    
T  39543802 tccgtcctttaatgtaggcacctattgcctttttcatatttcttaagaaatgttgtcc----------gtgtaattaatgtgtctgttttgtgcgttaat 39543713  T
Q  203 atta---ccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagta 271  Q
    ||||   |||||||||| ||||||||||||||||||||||||||||||||| || |||| ||||||||||||    
T  39543712 attattaccaaattgtcttttgtttgtatgtgtattaaatttgacttttcatatctcaa-gacaagttagta 39543642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 93 - 295
Target Start/End: Complemental strand, 38773498 - 38773306
Alignment:
Q  93 aattacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaat-gttctcaatgtaattaagtgtaattaaggtgtctgttt 191  Q
    ||||||| |||||||||||||||||||||| |||||| |||||||||||||||||| |||  ||| |||          ||| |||||| ||||||||||    
T  38773498 aattactccctccgtcccttaatgtaggcaaccattgtctttttcacatttcttaaaaaaaagttgtca----------gtgcaattaatgtgtctgttt 38773409  T
Q  192 tgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtt 291  Q
    |||||||||  ||||| |||||||| ||||||||||||||||| |||||||| |||||| ||||||| |||||| | ||| |||||||||   |||||||    
T  38773408 tgtgtgttaacattacgaaattgtcttttgtttgtatgtgtatgaaatttgatttttcatatttcaa-gacaagatggtagtattaattagaggtatgtt 38773310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 172 - 294
Target Start/End: Complemental strand, 45185347 - 45185226
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagta 271  Q
    |||||| || ||||||||||| ||| ||| ||||| |||||||||||||||||||||||||||| | ||||||||||||||||| || ||||||||||||    
T  45185347 tgtaataaatgtgtctgttttatgtattaatattatcaaattgtcctttgtttgtatgtgtattcattttgacttttcaaattttaa-gacaagttagta 45185249  T
Q  272 atattaattaagagtatgtttag 294  Q
     |||| |||||| ||||||||||    
T  45185248 gtattgattaagggtatgtttag 45185226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 190 - 283
Target Start/End: Original strand, 885505 - 885597
Alignment:
Q  190 tttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaag 283  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||  |||||||||||    
T  885505 tttgtgtgttaatattatcaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa-gacaaattagtggtattaattaag 885597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 170 - 390
Target Start/End: Complemental strand, 24962447 - 24962224
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||| |||| |||||| |||| ||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||   ||||||| ||||| ||||    
T  24962447 agtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttaactttttgtatttcaa-gacaaattag 24962349  T
Q  270 taatattaattaagagtatgtttagg----nnnnnnnnnntgtatcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatg 365  Q
    ||  |||||||| | |||||||||||              || |||| ||||||| ||||||  |||||||| ||||| |||||||||||||||||||||    
T  24962348 taggattaattaggggtatgtttaggaaaataataataaatgcatctagtaatttgaaaaggagtttacatttaaggacaaaaataaaatcaaatggatg 24962249  T
Q  366 actacattaagggacggagcgagta 390  Q
     ||||||  |||||||||| |||||    
T  24962248 cctacatatagggacggagggagta 24962224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 111 - 294
Target Start/End: Complemental strand, 37601019 - 37600846
Alignment:
Q  111 ttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttagtattaccaa 210  Q
    |||||||||| ||||||  |||||||||||||| |||||||||||| |          |||| ||||||| ||||||| ||| ||||||| || | ||||    
T  37601019 ttaatgtagggacccatcacctttttcacattttttaagaaatgttgt----------aagtataattaatgtgtctgatttatgtgttaatactgccaa 37600930  T
Q  211 attgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaata-ttaattaagagtatgtttag 294  Q
    ||| || ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| | ||||||||||    
T  37600929 attatcttttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaagttagtaatatttaattaggggtatgtttag 37600846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 30262620 - 30262497
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| |||||| |||||| |||||| ||||| ||||||||||||||| ||||||||||||||| |||||| | |||||||||||||||| ||||||||||    
T  30262620 agtgcaattaatgtgtctattttgtatgttaatattaccaaattgtcatttgtttgtatgtgtcttaaatctaacttttcaaatttcaa-gacaagttag 30262522  T
Q  270 taatattaattaagagtatgtttag 294  Q
    || ||||||||| | | ||||||||    
T  30262521 tagtattaattaggggcatgtttag 30262497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 96 - 295
Target Start/End: Original strand, 37141686 - 37141873
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| |||||||| ||||||||| ||||| ||||| |||||||||||| |||| ||| ||| |||          |||||||||| || |||||||||||    
T  37141686 tactccctccgtctcttaatgtaagcacctattgcatttttcacattttttaaaaaaagttgtca----------gtgtaattaatgtatctgttttgtg 37141775  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| |||||| |||||||| ||||||||||||||||||||||||||||||||  ||||||| | |||| ||| | || ||||||||| ||||||||||    
T  37141776 tgttaatattacgaaattgtcatttgtttgtatgtgtattaaatttgacttttcgtatttcaa-gtcaagatagaagta-taattaagaatatgtttagg 37141873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 7772538 - 7772660
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagta 271  Q
    ||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||| |||||||| ||||||| || ||| || |     
T  7772538 tgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcctttatttgtatgtgtattaaatttcacttttcatatttcaa-gataagatattg 7772636  T
Q  272 atattaattaagagtatgtttagg 295  Q
    |||||||||| |  ||||||||||    
T  7772637 atattaattagggatatgtttagg 7772660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 95 - 281
Target Start/End: Complemental strand, 38203139 - 38202964
Alignment:
Q  95 ttacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgt 194  Q
    ||||| ||||||||| ||||||||||||||| ||  |||||||||||||||||| ||| ||| ||           ||||||||||  ||| ||||||||    
T  38203139 ttactccctccgtcctttaatgtaggcacccgttatctttttcacatttcttaataaaagttgtcg----------gtgtaattaatatgtttgttttgt 38203050  T
Q  195 gtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    |||||| |||||| |||||||| |||||||||||||||||||||||||| |||||| ||||||| |||||| | ||| |||||||||    
T  38203049 gtgttaatattacgaaattgtcatttgtttgtatgtgtattaaatttgatttttcatatttcaa-gacaagatggtagtattaatta 38202964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 96 - 258
Target Start/End: Complemental strand, 38770333 - 38770181
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| ||||||| ||||||||||||||| ||||| |||||||| ||||||||||| | ||| |||          |||||||||| |||| | |||||||    
T  38770333 tactccctccgttccttaatgtaggcacgcattgtctttttcatatttcttaagataagttgtca----------gtgtaattaatgtgtttattttgtg 38770244  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    ||||| |||||| |||||||| |||||||||||||||||||| |||||||||||| |||||||    
T  38770243 tgttaatattacgaaattgtcatttgtttgtatgtgtattaattttgacttttcatatttcaa 38770181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 175 - 293
Target Start/End: Complemental strand, 5191626 - 5191509
Alignment:
Q  175 aattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaata 274  Q
    |||||| ||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||| |||||| ||||||| ||||| |||| | ||    
T  5191626 aattaatgtgtctgttttgtgtgttaatattaccaaattgtccattgtttatatgtgtattaaatttgatttttcatatttcaa-gacaatttagcagta 5191528  T
Q  275 ttaattaagagtatgttta 293  Q
     |||||| | |||||||||    
T  5191527 ctaattaggggtatgttta 5191509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 171 - 281
Target Start/End: Complemental strand, 14847002 - 14846893
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagt 270  Q
    |||||||||| ||||||| |||||| |||| |||||||| |||||| ||||||||||||||||||||||||||||||| | ||||||| |||||||||||    
T  14847002 gtgtaattaatgtgtctgctttgtgcgttaatattaccatattgtcttttgtttgtatgtgtattaaatttgactttttatatttcaa-gacaagttagt 14846904  T
Q  271 aatattaatta 281  Q
      |||||||||    
T  14846903 ggtattaatta 14846893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 191 - 293
Target Start/End: Complemental strand, 24276618 - 24276517
Alignment:
Q  191 ttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgt 290  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||| || |||||||  ||||||||||||||||||||| | ||||||    
T  24276618 ttgtgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaattttactttacatatttcaa-aacaagttagtaatattaattaggggtatgt 24276520  T
Q  291 tta 293  Q
    |||    
T  24276519 tta 24276517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 1177238 - 1177114
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||||||||||||| | ||| |||||| |||||||| ||| |||||||||||||||||||||| |||||| |||||||  ||||| |||    
T  1177238 agtgtaattaatgtgtctgttttgtatattaatattacgaaattgtcttttatttgtatgtgtattaaatttgatttttcatatttcaa-aacaagatag 1177140  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||||||||| | |||||||||||    
T  1177139 tagtattaattaggggtatgtttagg 1177114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 105 - 293
Target Start/End: Complemental strand, 1769584 - 1769408
Alignment:
Q  105 cgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttagtat 204  Q
    |||| ||||||||||||| ||||| | |||||||||||| |||||||||||| ||| ||||||||| |||| |           |||||| ||||| |||    
T  1769584 cgtctcttaatgtaggcatccattacttttttcacattttttaagaaatgttatcagtgtaattaa-tgtactcc---------ttttgtatgttaatat 1769495  T
Q  205 taccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgttta 293  Q
    ||||| |||||| |||||||||||||| |||||||||||||||| | ||||||| |||||||||||| ||||||||||| |||||||||    
T  1769494 taccacattgtcatttgtttgtatgtg-attaaatttgactttttatatttcaa-gacaagttagtagtattaattaagggtatgttta 1769408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 103 - 258
Target Start/End: Complemental strand, 16002862 - 16002717
Alignment:
Q  103 tccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttagt 202  Q
    ||||||||||||||||| |||||||| |||||||||||||| |||||||| ||| ||           |||||||||| ||||| ||||||||||||| |    
T  16002862 tccgtcccttaatgtagacacccatttcctttttcacattttttaagaaaagttgtct----------gtgtaattaatgtgtcagttttgtgtgttaat 16002773  T
Q  203 attaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    ||||  ||||| |||||||||||||| ||||||||||||||||||| | |||||||    
T  16002772 attaagaaattatcctttgtttgtatttgtattaaatttgactttttatatttcaa 16002717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 17933730 - 17933853
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttag-tattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagt 270  Q
    ||||||||| |||||| ||||||||||||  |||||||||| |||| ||||||||||||||||||||||||||||||||| | | | | |||||| || |    
T  17933730 tgtaattaatgtgtctattttgtgtgttaaatattaccaaactgtcatttgtttgtatgtgtattaaatttgacttttcata-tacgaagacaaggtatt 17933828  T
Q  271 aatattaattaagagtatgtttagg 295  Q
    ||||||||||| |||||||||||||    
T  17933829 aatattaattatgagtatgtttagg 17933853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 45183926 - 45183843
Alignment:
Q  187 tgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagta 271  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||    
T  45183926 tgttttatgtgttaatattaccaaattgtcctttgtttatatgtgtattaaatttgacttttcaaatttgaa-gacaagttagta 45183843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 170 - 292
Target Start/End: Original strand, 25888619 - 25888740
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||||||||  ||||| |||||| ||||| ||||| || |||||| |||||||||||||||||||||||||| |||||| |||| || ||||| ||||    
T  25888619 agtgtaattaatatgtctattttgtatgttaatattatcatattgtcatttgtttgtatgtgtattaaatttgatttttcatattttaa-gacaaattag 25888717  T
Q  270 taatattaattaagagtatgttt 292  Q
    || ||||||||| ||||||||||    
T  25888718 tactattaattaggagtatgttt 25888740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 177 - 365
Target Start/End: Complemental strand, 43191552 - 43191365
Alignment:
Q  177 ttaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatatt 276  Q
    |||| |||||| |||| ||||||| |||||| |||||||| |||||||||||||||||||||||| | |||||| ||||||| || |||||||||  |||    
T  43191552 ttaatgtgtctattttatgtgttaatattactaaattgtcatttgtttgtatgtgtattaaatttaaattttcatatttcaa-gataagttagtaggatt 43191454  T
Q  277 aattaagagtatgtttaggnnnnnnnnnntgtatcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatg 365  Q
    ||||| | |||||||||||          || |||| ||||||| ||||||  |||||||| |  || |||||||||||||||||||||    
T  43191453 aattaggggtatgtttaggagaaaaaaaatgcatctagtaatttgaaaaggagtttacatttagagacaaaaataaaatcaaatggatg 43191365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 3113615 - 3113491
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||||||||  |||||||||||||||||| ||||| ||||||||| ||||||| |||||||||||||||| | |||||| ||||||| || |||||      
T  3113615 agtgtaattaatatgtctgttttgtgtgttaatattatcaaattgtcttttgtttatatgtgtattaaatttaatttttcatatttcaa-gataagttta 3113517  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||||||||||  |||||||||||    
T  3113516 tagtattaattaatggtatgtttagg 3113491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 189 - 295
Target Start/End: Complemental strand, 12998756 - 12998646
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaat----gacaagttagtaatattaattaaga 284  Q
    |||||||||| | |||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||     |||||||||||| ||||||||| |     
T  12998756 ttttgtgtgtgaatattactaaattgtcctttgtttgtatgtgtattaaatttgacctttcatatttcaagacaagacaagttagtagtattaattaggg 12998657  T
Q  285 gtatgtttagg 295  Q
    |||||||||||    
T  12998656 gtatgtttagg 12998646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 175 - 295
Target Start/End: Original strand, 34882699 - 34882818
Alignment:
Q  175 aattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaata 274  Q
    |||||| |||||| |||||||||||| ||||| |||||| || ||||||||||||||| ||||||||||||||||| |||| || || || |||||  ||    
T  34882699 aattaatgtgtctattttgtgtgttaatattatcaaattatcttttgtttgtatgtgtgttaaatttgacttttcatattttaa-gataaattagtcgta 34882797  T
Q  275 ttaattaagagtatgtttagg 295  Q
    |||||||||| ||||||||||    
T  34882798 ttaattaagaatatgtttagg 34882818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 194 - 281
Target Start/End: Complemental strand, 23399835 - 23399749
Alignment:
Q  194 tgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||   |||||||||| |||||||||    
T  23399835 tgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaa-accaagttagtagtattaatta 23399749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 170 - 293
Target Start/End: Complemental strand, 31252737 - 31252615
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||||||||||||||||||| |||||| ||||   | |||||||| |||||||||||||||||||||||| |||| || |||||| |||    
T  31252737 agtgtaattaatgtgtctgttttgtgtgttaatattacgaaataaacatttgtttgcatgtgtattaaatttgacttttcatattttaa-gacaagatag 31252639  T
Q  270 taatattaattaagagtatgttta 293  Q
    || ||| ||||| | |||||||||    
T  31252638 tagtataaattaggggtatgttta 31252615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 171 - 281
Target Start/End: Original strand, 7172244 - 7172353
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagt 270  Q
    |||||||||| |||||| |||||||||||| |||||  |||||||| |||||||||||||| |||||| ||||||||||| ||||||| || ||||||||    
T  7172244 gtgtaattaatgtgtctattttgtgtgttaatattataaaattgtcatttgtttgtatgtgcattaaaattgacttttcatatttcaa-gataagttagt 7172342  T
Q  271 aatattaatta 281  Q
    | |||| ||||    
T  7172343 agtatttatta 7172353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 170 - 271
Target Start/End: Complemental strand, 40602123 - 40602023
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| |||||| ||||||  ||| ||||||| |||||| ||||| ||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  40602123 agtgcaattaatgtgtcttatttatgtgttaatattactaaattatcctttgtttgtatgtgtattaaatttgatttttcatatttcaatg-caagttag 40602025  T
Q  270 ta 271  Q
    ||    
T  40602024 ta 40602023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 170 - 391
Target Start/End: Complemental strand, 43980665 - 43980441
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||| |||| |||||| |||| ||||||| |||||| ||||| || |||||||||||||||||||||||||||||||   ||||||| || || ||||    
T  43980665 agtgtagttaatgtgtctattttatgtgttaatattactaaattatcatttgtttgtatgtgtattaaatttgactttttgtatttcaa-gataaattag 43980567  T
Q  270 taatattaattaagagtatgtttagg----nnnnnnnnnntgtatcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatg 365  Q
    ||  |||||||| | |||||||||||              || |||| ||||||| ||||||  |||||||| ||||| |||||||||||||||||| ||    
T  43980566 taggattaattaggggtatgtttaggaaaataataataaatgcatctagtaatttgaaaaggagtttacatttaaggacaaaaataaaatcaaatgggtg 43980467  T
Q  366 actacattaagggacggagcgagtat 391  Q
      |||||  |||||||||| ||||||    
T  43980466 cttacatatagggacggagggagtat 43980441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 170 - 291
Target Start/End: Original strand, 22590399 - 22590519
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| |||||| |||||| |||| ||||||| ||| |||||||||||| ||||||||||  || ||||||||||||||||| ||| ||| || |||||||    
T  22590399 agtgcaattaatgtgtctattttttgtgttaatatcaccaaattgtccattgtttgtataagtgttaaatttgacttttcatattgcaa-gataagttag 22590497  T
Q  270 taatattaattaagagtatgtt 291  Q
    || ||||||||| | |||||||    
T  22590498 tagtattaattaggggtatgtt 22590519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 35794778 - 35794851
Alignment:
Q  182 gtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaattt 255  Q
    |||||| |||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  35794778 gtgtctattttgtgtattaatattatcaaattgtcatttgtttgtatgtgtattaaatttgacttttcatattt 35794851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 94 - 278
Target Start/End: Original strand, 40790747 - 40790919
Alignment:
Q  94 attacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttg 193  Q
    |||||| ||||||||||||||||||  | ||| ||   ||||||||||||||||||||| ||| |||          |||||||||| | |||||||| |    
T  40790747 attactccctccgtcccttaatgtaaaccccctttatttttttcacatttcttaagaaaagttgtca----------gtgtaattaatgcgtctgttt-g 40790835  T
Q  194 tgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaa 278  Q
    ||| ||| ||||||||||||||| ||||||||||| |||| ||||||||||| |||| ||||||| ||||| |||||| ||||||    
T  40790836 tgtattaatattaccaaattgtcatttgtttgtatatgtaataaatttgactattcatatttcaa-gacaacttagtagtattaa 40790919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 171 - 270
Target Start/End: Original strand, 14739454 - 14739552
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagt 270  Q
    |||||||||| |||| | |||| | ||||| |||||||||||| |||||||||||| |||||||||||| ||||| |||| ||||||| |||||||||||    
T  14739454 gtgtaattaatgtgtttattttatatgttaatattaccaaattatcctttgtttgtgtgtgtattaaatgtgactattcatatttcaa-gacaagttagt 14739552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 194 - 281
Target Start/End: Original strand, 23280699 - 23280785
Alignment:
Q  194 tgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    ||||||| |||||| |||||||||||||||||||||| |||||||||||| |||||| ||| ||| | |||||||||| |||||||||    
T  23280699 tgtgttaatattactaaattgtcctttgtttgtatgtttattaaatttgatttttcatattacaa-gccaagttagtagtattaatta 23280785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 44255480 - 44255555
Alignment:
Q  173 gtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgactttt 248  Q
    |||||||| ||| || |||||||||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  44255480 gtaattaatgtgccttttttgtgtgttaatattatcaaattgtcatttgtttgtacgtgtattaaatttgactttt 44255555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 218 - 295
Target Start/End: Complemental strand, 14522379 - 14522302
Alignment:
Q  218 tttgtttgtatgtgtattaaattt-gacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    |||||||| ||||||||||||||| |||| |||||||||||| || ||||||||| ||||||||||| |||||||||||    
T  14522379 tttgtttgcatgtgtattaaattttgactattcaaatttcaa-gataagttagtagtattaattaagggtatgtttagg 14522302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 182 - 248
Target Start/End: Original strand, 34157953 - 34158019
Alignment:
Q  182 gtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgactttt 248  Q
    |||||| |||| ||||||| |||||| |||||||| ||||||||||||||||||||||||| |||||    
T  34157953 gtgtctattttatgtgttaatattactaaattgtcatttgtttgtatgtgtattaaatttggctttt 34158019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 41541585 - 41541692
Alignment:
Q  182 gtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    |||||| |||||||||| | ||||| ||||||||||||| ||  ||| ||||||||||||||||||||| ||||  ||   |||||| ||||||||||||    
T  41541585 gtgtctattttgtgtgtcaatattatcaaattgtcctttatt--tatatgtattaaatttgacttttcatattttcatacaaagttaataatattaatta 41541682  T
Q  282 agagtatgtt 291  Q
    || |||||||    
T  41541683 agggtatgtt 41541692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 218 - 283
Target Start/End: Original strand, 33385318 - 33385382
Alignment:
Q  218 tttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaag 283  Q
    ||||||| ||||| ||||||||||||||||||  ||||||| |||||||||||| |||||||||||    
T  33385318 tttgtttatatgtatattaaatttgacttttcgtatttcaa-gacaagttagtagtattaattaag 33385382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 35709181 - 35709057
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||| |||| ||||||  ||| ||||||| ||||| ||||||||| || || | | ||||||||||||||||||||||| || | || ||  ||||||    
T  35709181 agtgtagttaatgtgtctagtttatgtgttaatattatcaaattgtctttcgtatatgtgtgtattaaatttgacttttcatatgttaa-gattagttag 35709083  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||||||||| |||||| ||||||    
T  35709082 tagtattaattatgagtatatttagg 35709057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 226 - 295
Target Start/End: Complemental strand, 40808037 - 40807969
Alignment:
Q  226 tatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||| |||| ||||   |||||||||||    
T  40808037 tatgtgtattaaatttgacttttcatatttcaa-gacaagttagtagtattgattagttgtatgtttagg 40807969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 14906627 - 14906683
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtat 228  Q
    |||||||||  ||||| |||||||||||| |||||||||||| ||||||||||||||    
T  14906627 tgtaattaatatgtctattttgtgtgttaatattaccaaattatcctttgtttgtat 14906683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 241
Target Start/End: Complemental strand, 16644175 - 16644047
Alignment:
Q  103 tccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttagt 202  Q
    |||||||||  ||||| |||| |||||| ||||||||||||||||||||| |||           | ||||||||||| |||| | |||||||||||| |    
T  16644175 tccgtccctgtatgtaagcactcattgcatttttcacatttcttaagaaaagtt----------gttagtgtaattaatgtgtatattttgtgtgttaat 16644086  T
Q  203 attaccaaattgtcctttgtttgtatgtgtattaaattt 241  Q
    || || ||||||| |||||| ||||||||| ||||||||    
T  16644085 atcactaaattgttctttgtctgtatgtgtgttaaattt 16644047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 209 - 295
Target Start/End: Complemental strand, 45283528 - 45283444
Alignment:
Q  209 aaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| || |||||||||||| ||||||||||||||| |||| |||||||   ||||||||||| |||||||| |  ||||||||||    
T  45283528 aaattatcatttgtttgtatgggtattaaatttgactattcatatttcaa--gcaagttagtaacattaattagggatatgtttagg 45283444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 12894280 - 12894198
Alignment:
Q  176 attaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    ||||| |||||| |||||| ||  | |||||||| |||||| ||||||||||| |||||| | |||||||||||| |||||||    
T  12894280 attaatgtgtctattttgtatggaaatattaccatattgtcatttgtttgtatttgtatttagtttgacttttcatatttcaa 12894198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 14522686 - 14522641
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgt 215  Q
    ||||||||||| |||| |||||||||||||| ||||||||||||||    
T  14522686 agtgtaattaatgtgtatgttttgtgtgttaatattaccaaattgt 14522641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 256
Target Start/End: Original strand, 34869855 - 34869940
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttc 256  Q
    |||||| ||| |||| | |||||||| ||| ||||| ||||||||| ||||||| | |||| || ||||||||||||||| |||||    
T  34869855 gtgtaactaatgtgtatattttgtgtattaatattatcaaattgtcatttgtttatctgtgcataaaatttgacttttcatatttc 34869940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 281
Target Start/End: Original strand, 2031264 - 2031350
Alignment:
Q  194 tgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    ||||||| ||| | |||||||||||||||| |||| |||||||||||  | |||||| ||||||| || || |||||| |||||||||    
T  2031264 tgtgttaatataatcaaattgtcctttgttcgtatatgtattaaattatatttttcatatttcaa-gataaattagtagtattaatta 2031350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 293
Target Start/End: Original strand, 14907213 - 14907279
Alignment:
Q  226 tatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgttta 293  Q
    ||||||| |||||||||| |||||| ||||||| || ||||||| | ||||||||||| |||||||||    
T  14907213 tatgtgtgttaaatttgatttttcatatttcaa-gataagttagcagtattaattaagggtatgttta 14907279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 3006859 - 3006785
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgactttt 248  Q
    |||||||  ||||| |||| ||||||| |||||| ||||| || ||| | ||||||||||||||| |||||||||    
T  3006859 taattaatatgtctattttatgtgttaatattactaaattatcatttatctgtatgtgtattaaaattgactttt 3006785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 170
Target Start/End: Complemental strand, 4274054 - 4273980
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaa 170  Q
    |||| ||| ||||| ||||||||| |||  |||| ||||||||||||||||||||||| || | | |||||||||    
T  4274054 tactcccttcgtccattaatgtagacacgtattgtctttttcacatttcttaagaaatattgttagtgtaattaa 4273980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 5969876 - 5969827
Alignment:
Q  312 ttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    |||||||||||||| || |||||||| ||||| ||||||||||||||||||    
T  5969876 ttgtaatttaaaaaagg-tttacatttaaggacaaaaataaaatcaaatgg 5969827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 13487023 - 13486974
Alignment:
Q  312 ttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    ||||||||||||||   ||||||||| ||||||||||||||||||||||||    
T  13487023 ttgtaatttaaaaaat-atttacatttaaggataaaaataaaatcaaatgg 13486974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 31008408 - 31008359
Alignment:
Q  312 ttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    |||||||||||||| || |||||||| ||||| ||||||||||||||||||    
T  31008408 ttgtaatttaaaaaagg-tttacatttaaggacaaaaataaaatcaaatgg 31008359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 41726231 - 41726182
Alignment:
Q  312 ttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    |||||||||||||| || |||||||| ||||| ||||||||||||||||||    
T  41726231 ttgtaatttaaaaaagg-tttacatttaaggacaaaaataaaatcaaatgg 41726182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 365
Target Start/End: Original strand, 3656087 - 3656139
Alignment:
Q  312 ttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatg 365  Q
    ||||||||||||||  | |||||||| ||||| |||||||||||||||||||||    
T  3656087 ttgtaatttaaaaaatg-tttacatttaaggacaaaaataaaatcaaatggatg 3656139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 27679147 - 27679099
Alignment:
Q  312 ttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatg 361  Q
    |||||||||||||| || |||||||| ||||| |||||||||||||||||    
T  27679147 ttgtaatttaaaaaagg-tttacatttaaggacaaaaataaaatcaaatg 27679099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 57128 - 57076
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatg 361  Q
    |||| ||||||| ||||||| |||||||| | ||| |||||||||||||||||    
T  57128 atctagtaatttgaaaaggggtttacatttagggacaaaaataaaatcaaatg 57076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 14739600 - 14739652
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatg 361  Q
    |||| |||||||| ||||||||||||||| |  |||||| |||||||||||||    
T  14739600 atctagtaatttagaaagggatttacatttagagataaagataaaatcaaatg 14739652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 16355785 - 16355837
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaa 148  Q
    |||| ||||||||||||||| ||  | |||||||| |||||||||||||||||    
T  16355785 tactccctccgtcccttaatataatcccccattgcatttttcacatttcttaa 16355837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 34127612 - 34127552
Alignment:
Q  92 taattacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaa 152  Q
    |||||||| ||||||||||||||| || ||||| ||||| ||||||||  || ||||||||    
T  34127612 taattactccctccgtcccttaatataagcacctattgcgtttttcactcttattaagaaa 34127552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 40601980 - 40601924
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatg 365  Q
    |||| ||||||| ||||| | |||||||| ||||| ||||||||| |||||||||||    
T  40601980 atctagtaatttgaaaagaggtttacatttaaggacaaaaataaagtcaaatggatg 40601924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 102)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 10 - 295
Target Start/End: Original strand, 43800672 - 43800956
Alignment:
Q  10 gagaagaatattaaaagagaatcaatcttaatctttggattgatatgcttagtctacttagatggcaacaaatatggtacactaattacttcctccgtcc 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  43800672 gagaagaatattaaaagagaatcaatcgtaatctttggattgatatgcttagtctacttagatggtaacaaatatggtacactaattactccctccgtcc 43800771  T
Q  110 cttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttagtattacca 209  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  43800772 cttaacgtaggcacccattgcctttttcacatttgttaagaaatgttctcagtgtaattaagtgtaattaaggtgtctgttttgtgtgttaatattacca 43800871  T
Q  210 aattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||| ||| ||||||||| | |||| ||||||    
T  43800872 aattgtcctttgtttgtatgtgtatttaatttgacttttcatatttcaa-gacaagttggtagtattaattaggggtatatttagg 43800956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 102 - 292
Target Start/End: Original strand, 5448628 - 5448807
Alignment:
Q  102 ctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttag 201  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||           |||||||||||||||||||     
T  5448628 ctccgtcccttaatgtaggcatccattgcctttttcacatttcttaagaaatgttatcaatataattaat----------gtgtctgttttgtgtgttaa 5448717  T
Q  202 tattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgttt 292  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||| || | ||||||| ||||||||| | ||||||||    
T  5448718 tattacgaaattatcctttgtttgtatgtgtattaaatttgacttttcatatttcaa-gatatgttagtagtattaattatgggtatgttt 5448807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 93 - 295
Target Start/End: Original strand, 25477182 - 25477373
Alignment:
Q  93 aattacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgtttt 192  Q
    ||||||| |||  ||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||          |||||||||| |||||||||||    
T  25477182 aattactccctatgtcccttaatgtaggcatccattgcttttttcacatttcttaagaaaagttgtca----------gtgtaattaatgtgtctgtttt 25477271  T
Q  193 gtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgttt 292  Q
     ||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||| | ||||||||    
T  25477272 atgtgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaagatagtagtattaattaggggtatgttt 25477370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 96 - 281
Target Start/End: Original strand, 16070391 - 16070565
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||| | |||          |||||||||| ||||||||||||||    
T  16070391 tactccctccgtcccttaatgtaggcacctattgtctttttcacatttcttaagaaatgctgtca----------gtgtaattaatgtgtctgttttgtg 16070480  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    ||||| |||||||||||| || ||||||| ||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||    
T  16070481 tgttaatattaccaaattatcttttgtttatatatgtattaaatttgacttttcatatttcaat-acaagttagtagtattaatta 16070565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 96 - 293
Target Start/End: Complemental strand, 20262539 - 20262353
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| |||| |||||||||| ||| ||| |||||||||||||||||||||||||||| ||| |||          |||||||||| ||||||||||||||    
T  20262539 tactccctctgtcccttaatatagacactcattgcctttttcacatttcttaagaaaagttgtca----------gtgtaattaatgtgtctgttttgtg 20262450  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgttta 293  Q
    ||||| |||||| |||||||  ||||||||||||||||||||||||||||||||| |||||||  ||||| ||||| ||||||||||| |||||||||    
T  20262449 tgttaatattacgaaattgttatttgtttgtatgtgtattaaatttgacttttcatatttcaa-aacaagatagtagtattaattaagggtatgttta 20262353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 96 - 293
Target Start/End: Original strand, 52225979 - 52226165
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| ||||||||| |||||||||| ||| |||| ||||||||||||| |||||||||||| |||          || ||||||| ||||||||||| |     
T  52225979 tactccctccgtcctttaatgtaggtacctattgtctttttcacattttttaagaaatgttgtca----------gtataattaatgtgtctgttttata 52226068  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgttta 293  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||| | |||||||||    
T  52226069 tgttaatattatcaaattgtcctttgtttatatgtgtattaaatttgacttttcatatttcaa-gacaagttagtagtattaattaggggtatgttta 52226165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 30153303 - 30153180
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||||||||||||||| || |||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  30153303 agtgtaattaatgtgtctgttttgtgtgataatattaccaaattatcctttatttgtatgtgtattaaatttgacttttcatatttcaa-gacaagttag 30153205  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || |||||||| ||||||||||||||    
T  30153204 tagtattaatt-agagtatgtttagg 30153180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 33246578 - 33246455
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||||||||  ||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| || ||||||| ||||||||||    
T  33246578 agtgtaattaaaatgtctattttgtgtgttaatattaccaaattatcctttgtttgtatgtgtattaaatttgactttacatatttcaa-gacaagttag 33246480  T
Q  270 taatattaattaagagtatgtttag 294  Q
    || ||||||||| ||||||||||||    
T  33246479 tagtattaattaggagtatgtttag 33246455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 96 - 295
Target Start/End: Complemental strand, 39237738 - 39237546
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcac----ccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttt 191  Q
    |||| |||||||||||||||||||||||    |||||| ||||||||||||| |||||||| ||| |||          |||||||||| || |||||||    
T  39237738 tactccctccgtcccttaatgtaggcacgcatccattgtctttttcacattttttaagaaaagttgtca----------gtgtaattaatgtatctgttt 39237649  T
Q  192 tgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtt 291  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||||||| |||||| || || ||||||||| | |||||||    
T  39237648 tgtgtgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgactttttatatttcaa-gacaagataatattattaattaggggtatgtt 39237550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 95 - 295
Target Start/End: Complemental strand, 22750988 - 22750799
Alignment:
Q  95 ttacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgt 194  Q
    ||||| ||||||||||||||||||  | | | |||| ||||||||||||||||||||| ||| ||           |||||||||| || ||||||||||    
T  22750988 ttactccctccgtcccttaatgtaatccctctttgcatttttcacatttcttaagaaaagttgtct----------gtgtaattaatgtatctgttttgt 22750899  T
Q  195 gtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttag 294  Q
    || ||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||| |||||| ||||||||| | |||||| |||    
T  22750898 gtattaatattaccaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaacttagtagtattaattaggggtatgtatag 22750800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 96 - 364
Target Start/End: Original strand, 51787731 - 51787991
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| ||||||| ||||||||||||||| |||| | ||||||||||||||||||||| ||| ||           |||||||||| ||||||||||||||    
T  51787731 tactccctccgttccttaatgtaggcactcattccatttttcacatttcttaagaaaagttgtcg----------gtgtaattaatgtgtctgttttgtg 51787820  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| |||||| |||| | | ||||||||||||||||||||||||||||||||| ||||||| |||||  || || ||||||||| |  ||||||||||    
T  51787821 tgttaatattacgaaatagacatttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaaaataatagtattaattagggatatgtttagg 51787919  T
Q  296 ---nnnnnnnnnntgtatcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggat 364  Q
                 ||||||| ||||||||||||||  |||| ||| ||||| ||||||||||||||||||||    
T  51787920 aaaaaataataaatgtatctagtaatttaaaaaggagtttatatttaaggacaaaaataaaatcaaatggat 51787991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 96 - 258
Target Start/End: Original strand, 46729266 - 46729417
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||||||| ||||||||||||||| ||  ||||| ||||||||||||| |||||||| ||| |||          |||||||||| ||||||||||||||    
T  46729266 tacttccttcgtcccttaatgtagacattcattgtctttttcacattt-ttaagaaaagttgtca----------gtgtaattaatgtgtctgttttgtg 46729354  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    ||||| |||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  46729355 tgttaatattacgaaattgtcctatgtttgtatgtgtattaaatttgacttttcatatttcaa 46729417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 114 - 295
Target Start/End: Original strand, 24072745 - 24072915
Alignment:
Q  114 atgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttagtattaccaaatt 213  Q
    |||||||||||||||| |||||| ||||||||||||||| ||| |||||||||||||           ||||||||||| ||||||| |||||  |||||    
T  24072745 atgtaggcacccattgtcttttttacatttcttaagaaaagttgtcaatgtaattaat----------gtgtctgttttttgtgttaatattatgaaatt 24072834  T
Q  214 gtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||| |||| ||| |||||||||||||||||||||||| ||||||| |||||| | ||| ||||||||||| |||||||||||    
T  24072835 gtcatttgcttgaatgtgtattaaatttgacttttcatatttcaa-gacaagatggtagtattaattaagggtatgtttagg 24072915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 41945853 - 41945730
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||| |||||| |||| || |||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||| |||    
T  41945853 agtgtaattaatgtgt-tgttttatgtgataatattacgaaattgtcctttgtttgtatatgtattaaatttgacttttcatatttcaa-gacaagatag 41945756  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    ||||||||| || |||||||||||||    
T  41945755 taatattaagtaggagtatgtttagg 41945730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 93 - 293
Target Start/End: Complemental strand, 52552659 - 52552470
Alignment:
Q  93 aattacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgtttt 192  Q
    ||||||| | |||||||||||||||||||||||| |||| ||||||| ||| |||||||| ||| ||| |||||| || |          |||||| |||    
T  52552659 aattactccatccgtcccttaatgtaggcacccaatgcccttttcacgttttttaagaaaagttgtcagtgtaataaatt----------tgtctgcttt 52552570  T
Q  193 gtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgttt 292  Q
     ||||||| |||||||||||| ||||||||||||| |||||| ||||||||||||||| ||||||| || ||||||||| ||||||||| | ||||||||    
T  52552569 atgtgttaatattaccaaattatcctttgtttgtacgtgtataaaatttgacttttcatatttcaa-gataagttagtagtattaattaggggtatgttt 52552471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 170 - 294
Target Start/End: Original strand, 32236855 - 32236978
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||||||||  |||||||||||||||||| ||||| |||||| | |||||||| ||||||||||||||||||||||||| |||||||| | || ||||    
T  32236855 agtgtaattaatatgtctgttttgtgtgttaatattatcaaattattctttgtttatatgtgtattaaatttgacttttcatatttcaat-ataaattag 32236953  T
Q  270 taatattaattaagagtatgtttag 294  Q
    |||||||||||| | ||||||||||    
T  32236954 taatattaattaggggtatgtttag 32236978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 170 - 365
Target Start/End: Original strand, 38136379 - 38136572
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||||| |||||||||||| ||||| ||||||||| |||||||||||||||| | ||||||| |||||| ||||||| | ||||||||    
T  38136379 agtgtaattaatgtgtctattttgtgtgttaatattatcaaattgtcatttgtttgtatgtgtaattaatttgatttttcatatttcaa-ggcaagttag 38136477  T
Q  270 taatattaattaagagtatgtttaggnnnnnnnnnntgtatcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatg 365  Q
    || ||||||||| | ||||||| |||          ||||||| ||||||| ||||||  |||||||| | ||||||||||||| |||||||||||    
T  38136478 tagtattaattaggggtatgttcagg-aaaaaaaaatgtatctagtaatttgaaaaggagtttacatttatggataaaaataaagtcaaatggatg 38136572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 5168004 - 5168126
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagt 270  Q
    ||||||||||  ||||||||||||| |||| |||||| |||||||| |||||||||||||||||||||||| | |||||| |||||||| ||||| ||||    
T  5168004 gtgtaattaatatgtctgttttgtgcgttaatattactaaattgtcatttgtttgtatgtgtattaaatttaatttttcatatttcaat-acaagctagt 5168102  T
Q  271 aatattaattaagagtatgtttag 294  Q
    | ||||||||||| ||||||||||    
T  5168103 agtattaattaagggtatgtttag 5168126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 170 - 293
Target Start/End: Original strand, 5932910 - 5933032
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||| |||||||||||||| ||||| ||||||||| ||||||| |||||||||||||||| | ||||  |||||||| ||||||||||    
T  5932910 agtgtaattaatgtgtttgttttgtgtgttaatattatcaaattgtcatttgtttttatgtgtattaaatttaatttttttaatttcaa-gacaagttag 5933008  T
Q  270 taatattaattaagagtatgttta 293  Q
    || ||||||||| |||||||||||    
T  5933009 tattattaattatgagtatgttta 5933032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 170 - 293
Target Start/End: Complemental strand, 20185737 - 20185615
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||   ||||||||||||| ||||||||||||| | ||||||||||| ||||||||||||||||||||| ||||||| ||||| ||||    
T  20185737 agtgtaattaatgtgcaagttttgtgtgttaatattaccaaattgccttttgtttgtatttgtattaaatttgacttttcatatttcaa-gacaaattag 20185639  T
Q  270 taatattaattaagagtatgttta 293  Q
    || ||||||||||| |||||||||    
T  20185638 tagtattaattaagggtatgttta 20185615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 29584918 - 29585035
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||||| || ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | |||| || |||||||||     
T  29584918 agtgtaattaatgtgtctattctgtgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaatttgactttttatattttaa-gacaagttaa 29585016  T
Q  270 taatattaattaagagtat 288  Q
    || |||||||||| |||||    
T  29585017 tagtattaattaaaagtat 29585035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 171 - 281
Target Start/End: Original strand, 43509107 - 43509215
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagt 270  Q
    |||||||||| |||| |||||||||||||| ||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||| |||||    
T  43509107 gtgtaattaatgtgt-tgttttgtgtgttaatattatcaaattgtcttttgtttgtatgtgtattaaatttaacttttcaaatttcaa-gacaaattagt 43509204  T
Q  271 aatattaatta 281  Q
    | |||||||||    
T  43509205 agtattaatta 43509215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 172 - 372
Target Start/End: Original strand, 22651490 - 22651693
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagta 271  Q
    ||||||||| |||| | |||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||| |   |||||| ||||||||| ||    
T  22651490 tgtaattaatgtgtttattttgtatgttaatattaccaaattgtcttttgtttgtatgtgtattaaatttgactttacgtgtttcaa-gacaagttatta 22651588  T
Q  272 atattaattaagagtatgtttagg----nnnnnnnnnntgtatcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatgac 367  Q
    |||||||||| | |||||||||||              || |||| ||||||| ||||||  |||||||| |||||||||||||||||||||||| |||     
T  22651589 atattaattaggggtatgtttaggaaaaaaataataaatgcatctagtaatttgaaaaggagtttacatttaaggataaaaataaaatcaaatgggtgat 22651688  T
Q  368 tacat 372  Q
    |||||    
T  22651689 tacat 22651693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 37175102 - 37174976
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag- 269  Q
    |||||||||| |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||| || |||||||     
T  37175102 gtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgtattaaattagacttttcatatttcaa-gataagttaga 37175004  T
Q  270 --taatattaattaagagtatgtttagg 295  Q
      || |||| ||||||||||| ||||||    
T  37175003 aatagtatttattaagagtatatttagg 37174976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 174 - 295
Target Start/End: Complemental strand, 37625202 - 37625082
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaat 273  Q
    ||||||| |||| | |||||||||||| |||||| ||||| || ||||||| ||||||||||||||||||||||||| ||||||| ||  |||||||| |    
T  37625202 taattaatgtgtttattttgtgtgttaatattactaaattatcatttgtttatatgtgtattaaatttgacttttcatatttcaa-gattagttagtagt 37625104  T
Q  274 attaattaagagtatgtttagg 295  Q
    ||||||||||||||||||||||    
T  37625103 attaattaagagtatgtttagg 37625082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 45628155 - 45628045
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||| | ||||||||||||||| ||| ||||||||||||| ||||| ||| ||||||||||||||||||||||||| ||||||| |||||||||     
T  45628155 agtgtaattgatgtgtctgttttgtgtattaatattaccaaattgccctttattt-tatgtgtattaaatttgacttttcatatttcaa-gacaagttaa 45628058  T
Q  270 taatattaattaa 282  Q
    |||||||||||||    
T  45628057 taatattaattaa 45628045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 20291366 - 20291487
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagta 271  Q
    ||||||||| |||||| ||||||| |||| |||||| ||||| || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||    
T  20291366 tgtaattaatgtgtctattttgtgggttaatattactaaattatcatttgtttgtatgtgtattaaatttgacttttcatatttcaa-gataagttagta 20291464  T
Q  272 atattaattaagagtatgtttagg 295  Q
     ||||||||| || ||||||||||    
T  20291465 gtattaattagga-tatgtttagg 20291487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 39197098 - 39196992
Alignment:
Q  187 tgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagt 286  Q
    |||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||  ||||||||||| ||||||||| | ||    
T  39197098 tgttttgtgtgttaatattatcaaattgtcttttgtttgtatgtgtattaaatttgacttttcaaattttaa-aacaagttagtattattaattaggtgt 39197000  T
Q  287 atgtttag 294  Q
    || |||||    
T  39196999 atatttag 39196992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 100 - 258
Target Start/End: Original strand, 50782742 - 50782890
Alignment:
Q  100 tcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgtt 199  Q
    |||||||||||||||| |||||||||| |  |||||||||||||||||||||| ||| |||          |||||||||| ||||||||||||||| ||    
T  50782742 tcctccgtcccttaatataggcacccaatatctttttcacatttcttaagaaaagttgtca----------gtgtaattaatgtgtctgttttgtgtctt 50782831  T
Q  200 agtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    | |||||| ||||||||||||||||||||||||||||| ||| | |||| | |||||||    
T  50782832 aatattacgaaattgtcctttgtttgtatgtgtattaactttaattttttatatttcaa 50782890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 54438538 - 54438644
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaat 273  Q
    ||||||| ||||||||||||||||||| |||||| ||||| |||||| ||||||||||||||||||||||||||||| |||||||  ||||| ||||| |    
T  54438538 taattaaagtgtctgttttgtgtgttaatattacgaaattatcctttatttgtatgtgtattaaatttgacttttcatatttcaa-aacaagatagtagt 54438636  T
Q  274 attaatta 281  Q
    ||||||||    
T  54438637 attaatta 54438644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 13096623 - 13096499
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||||||| |||||||||| ||||||||||||||| ||||||| |||||| || ||| || |||||||| |||| || |||||||||     
T  13096623 agtgtaattaatgtgtctgtgttgtgtgttaatattaccaaattgtcatttgtttctatgtgcataaaaattaacttttcatattttaa-gacaagttac 13096525  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||||||||||| |||||||||||    
T  13096524 tagtattaattaagggtatgtttagg 13096499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 96 - 291
Target Start/End: Complemental strand, 48472641 - 48472456
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttctt-aagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgt 194  Q
    |||||| || ||||||||||||||||| |||||| ||||||||||||| || |||||| ||| |||          |||||||||| |||||| ||||||    
T  48472641 tacttcatctgtcccttaatgtaggcatccattgtctttttcacatttttttaagaaaagttgtca----------gtgtaattaatgtgtctattttgt 48472552  T
Q  195 gtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtt 291  Q
    |||||| |||||| ||||| |||||| ||||||||||||| ||||||||||||| | ||||||| |||||| || || ||||||||| | |||||||    
T  48472551 gtgttaatattacgaaattatcctttctttgtatgtgtatgaaatttgactttttatatttcaa-gacaagataatagtattaattaggggtatgtt 48472456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 56373425 - 56373301
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| |||||| |||| | |||||||||||| ||||||||||||||| ||||||||| |||||||||||||||  |||||| ||||||| |||||||||     
T  56373425 agtgcaattaatgtgtttattttgtgtgttaatattaccaaattgtcatttgtttgtctgtgtattaaatttgttttttcatatttcaa-gacaagttat 56373327  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||||||||||| ||| |||||||    
T  56373326 tagtattaattaagggtacgtttagg 56373301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 10602287 - 10602167
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||||||||  ||||| |||||||||||| |||||| |||||||| ||||||    ||||||||||||||||||||||| |||||||  |||| ||||    
T  10602287 agtgtaattaatttgtctattttgtgtgttaatattactaaattgtcttttgtt----tgtgtattaaatttgacttttcatatttcaa-aacaaattag 10602193  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || |||||||||||||||||||||||    
T  10602192 tagtattaattaagagtatgtttagg 10602167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 189 - 293
Target Start/End: Complemental strand, 41920100 - 41919997
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtat 288  Q
    |||||||||||| ||||||||||||||| |||||||||||||| | |||||||||||||||| ||||||| || ||||||||| ||||||||| | ||||    
T  41920100 ttttgtgtgttaatattaccaaattgtcttttgtttgtatgtgaaataaatttgacttttcatatttcaa-gataagttagtagtattaattaggggtat 41920002  T
Q  289 gttta 293  Q
    |||||    
T  41920001 gttta 41919997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 14602736 - 14602611
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||||||  ||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | |||| || || |||||||    
T  14602736 agtgtaattaatgtgtctagtttttgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaatttgactttttatattttaa-gataagttag 14602638  T
Q  270 ta--atattaattaagagtatgtttag 294  Q
    ||  |||||||||| | ||||||||||    
T  14602637 tagtatattaattaggggtatgtttag 14602611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 171 - 258
Target Start/End: Original strand, 34543727 - 34543814
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||||||||| |||||| |||||||||||| |||||||||||  ||||||||||||||||||||||| |||||||||||| |||||||    
T  34543727 gtgtaattaatgtgtctattttgtgtgttaatattaccaaataatcctttgtttgtatgtgtattaattttgacttttcatatttcaa 34543814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 189 - 295
Target Start/End: Original strand, 7002226 - 7002331
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtat 288  Q
    |||| ||||||| |||||||||||| |||||||||||||||||| |||||||||| |||||| ||||||| || ||||||| | ||||||||||| ||||    
T  7002226 ttttatgtgttaatattaccaaattatcctttgtttgtatgtgtgttaaatttgatttttcatatttcaa-gataagttagcagtattaattaagggtat 7002324  T
Q  289 gtttagg 295  Q
    |||||||    
T  7002325 gtttagg 7002331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 19654452 - 19654576
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||||| |||| ||||||  |||||||||||| || ||| ||||||||||||||||||||  ||||||| |||||||  |||||||||    
T  19654452 agtgtaattaatgtgtctattttatgtgttgatattaccaaattatcatttatttgtatgtgtattaaatttatcttttcatatttcaa-aacaagttag 19654550  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||||| ||| |||||||||||||    
T  19654551 tagtattagttaggagtatgtttagg 19654576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 127 - 295
Target Start/End: Original strand, 20293734 - 20293895
Alignment:
Q  127 ttgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgt 226  Q
    |||| ||||||||||||||||||||| ||| ||| |||||||||      |||| |||| | |||| | || || ||||||  ||||||| |||||||||    
T  20293734 ttgcttttttcacatttcttaagaaaagttgtcagtgtaattaa------ttaatgtgtatattttttatgctaatattactgaattgtcttttgtttgt 20293827  T
Q  227 atgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    || |||||||||||||||| |||| |||||||| ||||||||||| |||||| |||| |||||||||||    
T  20293828 atttgtattaaatttgactattcatatttcaat-acaagttagtagtattaagtaagggtatgtttagg 20293895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 52198809 - 52198685
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||||||||  |||||||| ||||| ||| |||||||||||| || ||| |||||||||||||| |||||||||||| | |||||||  |||||||||    
T  52198809 agtgtaattaatatgtctgttctgtgtattaatattaccaaattatcttttatttgtatgtgtattgaatttgactttttatatttcaa-aacaagttag 52198711  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||||||||| | |||||||||||    
T  52198710 tagtattaattaggggtatgtttagg 52198685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 174 - 283
Target Start/End: Original strand, 52676048 - 52676157
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaat 273  Q
    |||||||  ||||| |||| ||| ||| |||||  |||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||| || |    
T  52676048 taattaatatgtctattttttgtattaatattattaaattgtcctttatttatatgtgtattaaatttgacttttcaaatttcaaagacaagttaatagt 52676147  T
Q  274 attaattaag 283  Q
    ||||||||||    
T  52676148 attaattaag 52676157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 170 - 258
Target Start/End: Complemental strand, 28116586 - 28116498
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||||||||||  ||||| |||||||||||| |||| ||||||| || ||||||||||||||||||||||||||||||||| |||||||    
T  28116586 agtgtaattaatatgtctattttgtgtgttaatattgccaaattatcatttgtttgtatgtgtattaaatttgacttttcatatttcaa 28116498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 189 - 293
Target Start/End: Complemental strand, 40411405 - 40411302
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtat 288  Q
    |||||||||||| |||||  |||||||| |||||||||||||||||||||||| |||||||| ||||||| |||||| || |||||||||||| | ||||    
T  40411405 ttttgtgtgttaatattatgaaattgtcatttgtttgtatgtgtattaaatttaacttttcatatttcaa-gacaagataataatattaattaggggtat 40411307  T
Q  289 gttta 293  Q
    |||||    
T  40411306 gttta 40411302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 175 - 291
Target Start/End: Complemental strand, 51918728 - 51918617
Alignment:
Q  175 aattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaata 274  Q
    |||||| |||||| ||||||||||||||||||||||||| | |||||||||||    ||||||||||||||||||| ||||||| |||||||||  | ||    
T  51918728 aattaatgtgtctattttgtgtgttagtattaccaaattattctttgtttgta----tattaaatttgacttttcatatttcaa-gacaagttaacagta 51918634  T
Q  275 ttaattaagagtatgtt 291  Q
    ||||||||| |||||||    
T  51918633 ttaattaagggtatgtt 51918617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 113 - 250
Target Start/End: Original strand, 5536474 - 5536601
Alignment:
Q  113 aatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttagtattaccaaat 212  Q
    ||||||||||||||| ||||||||||||||||||||||||  || |||          |||||||||| |||||||||||| |||||| || ||| ||||    
T  5536474 aatgtaggcacccatagcctttttcacatttcttaagaaaaattgtca----------gtgtaattaatgtgtctgttttgcgtgttaatactacgaaat 5536563  T
Q  213 tgtcctttgtttgtatgtgtattaaatttgacttttca 250  Q
    | || |||||||||||||||||||||||||| ||||||    
T  5536564 tttcatttgtttgtatgtgtattaaatttgatttttca 5536601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 12624720 - 12624798
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgactttt 248  Q
    ||||||||||| ||| || |||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  12624720 agtgtaattaatgtgactattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgactttt 12624798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 172 - 258
Target Start/End: Complemental strand, 31937471 - 31937385
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    ||||||||| ||||||||||||||||||| |||||  |||||||| ||||||||||||| ||| ||||||||||||||| |||||||    
T  31937471 tgtaattaatgtgtctgttttgtgtgttaatattattaaattgtcatttgtttgtatgtatataaaatttgacttttcatatttcaa 31937385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 31486512 - 31486636
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| |||||| |||||| |||||||||||| |||||| ||||| |||||||||| |||| ||||||||||||| |||| | ||||||| | |||||| |    
T  31486512 agtgcaattaatgtgtctattttgtgtgttaatattactaaattatcctttgtttatatgcgtattaaatttgattttttatatttcaa-ggcaagttgg 31486610  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    |||||||||||||   ||||||||||    
T  31486611 taatattaattaaagatatgtttagg 31486636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 183 - 293
Target Start/End: Original strand, 20016560 - 20016667
Alignment:
Q  183 tgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaa 282  Q
    ||||| |||||| ||||| |||||||||||| |||||||||||||  |||||||||||||| ||| || ||||||| ||||||||||||  |||||||||    
T  20016560 tgtctattttgtatgttaatattaccaaattttcctttgtttgta--tgtattaaatttgagtttacatatttcaa-gacaagttagtagcattaattaa 20016656  T
Q  283 gagtatgttta 293  Q
     ||||||||||    
T  20016657 aagtatgttta 20016667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 281
Target Start/End: Original strand, 41459631 - 41459721
Alignment:
Q  190 tttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    |||||| |||| |||||| |||||||| ||| ||| ||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||    
T  41459631 tttgtgcgttaatattactaaattgtcttttatttatatgtgtattaaatttgacttttcatatttc-atgacaagttagtagtattaatta 41459721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 186 - 294
Target Start/End: Original strand, 20116490 - 20116598
Alignment:
Q  186 ctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatatt-aattaaga 284  Q
    ||||||||||||||| |||||  |||||||| |||||||||||||||||||||||||| |||||| ||||||| |||||| || || |||| ||||| |     
T  20116490 ctgttttgtgtgttaatattaggaaattgtcatttgtttgtatgtgtattaaatttgatttttcatatttcaa-gacaagataatagtattaaattaggg 20116588  T
Q  285 gtatgtttag 294  Q
    ||||||||||    
T  20116589 gtatgtttag 20116598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 189 - 294
Target Start/End: Original strand, 21171767 - 21171871
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtat 288  Q
    ||||||| |||| ||||| |||||| || ||| |||||||||||||||||||||||||| || ||||||| || ||||||||| ||||||||| | ||||    
T  21171767 ttttgtgggttaatattatcaaattatcttttatttgtatgtgtattaaatttgactttacatatttcaa-gataagttagtagtattaattaggggtat 21171865  T
Q  289 gtttag 294  Q
    ||||||    
T  21171866 gtttag 21171871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 26186817 - 26186748
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||||    
T  26186817 ttttgtgtgttaatattatcaaattgtcatttgtttgtatgtgtattaaatttgactttttatatttcaa 26186748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 189 - 258
Target Start/End: Original strand, 31840139 - 31840208
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| | |||||||    
T  31840139 ttttgtgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaatttgtctttttatatttcaa 31840208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 183 - 295
Target Start/End: Original strand, 39414273 - 39414382
Alignment:
Q  183 tgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaa 282  Q
    ||||| |||||||||||| ||||| |||||| || ||||||||||||||  ||||||||||||||||| ||||||| || ||||||||  |||||||||     
T  39414273 tgtctattttgtgtgttaatattatcaaattatcttttgtttgtatgtg--ttaaatttgacttttcatatttcaa-gataagttagtggtattaattag 39414369  T
Q  283 gagtatgtttagg 295  Q
    | |||||||||||    
T  39414370 gggtatgtttagg 39414382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 5416938 - 5416862
Alignment:
Q  182 gtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||||| |||||| ||||| ||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||    
T  5416938 gtgtctattttgtttgttaatattaccaaattgtgttttgtttgtatgtgtattaaatttgacttttaatatttcaa 5416862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 26203156 - 26203278
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagta 271  Q
    ||||||||| || | | |||| ||||||| |||||| |||||||| ||| ||||||||| ||||||||||||||||||  ||||||| ||||||||||||    
T  26203156 tgtaattaatgtatatattttatgtgttaatattacaaaattgtcttttctttgtatgtatattaaatttgacttttcgtatttcaa-gacaagttagta 26203254  T
Q  272 atattaattaagagtatgtttagg 295  Q
      |||||||| | | |||||||||    
T  26203255 tgattaattaggggaatgtttagg 26203278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 56217108 - 56217010
Alignment:
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    |||||||||||| | |||||||||||||||||| |||||||||||| |||||||| ||||||| || ||| ||||| |||||||||   |||||||||||    
T  56217108 tgttagtattacgatattgtcctttgtttgtatttgtattaaatttaacttttcatatttcaa-gataagatagtagtattaattagaggtatgtttagg 56217010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 187 - 293
Target Start/End: Original strand, 32107886 - 32107991
Alignment:
Q  187 tgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagt 286  Q
    |||||||||| ||| ||||| ||||||||| ||| ||||||| ||||||||||||||||||||| |||| || || || |||||||||||||| |||  |    
T  32107886 tgttttgtgtattaatattatcaaattgtcttttatttgtatatgtattaaatttgacttttcatattttaa-gataaattagtaatattaataaaggat 32107984  T
Q  287 atgttta 293  Q
    |||||||    
T  32107985 atgttta 32107991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 204 - 288
Target Start/End: Original strand, 20540029 - 20540111
Alignment:
Q  204 ttaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtat 288  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||| |||| ||| |||||||| || ||||||||||| ||||    
T  20540029 ttaccaaattgttctttgtttgtatgtgtattaaatttgac-tttcatattttaat-acaagttactagtattaattaagggtat 20540111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 44812687 - 44812564
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagt 270  Q
    |||||||||| || | |||||| | ||||| |||||| |||||||| ||| ||||| ||||||||||||||||||||||| |||||||  ||||  ||||    
T  44812687 gtgtaattaatgtatttgttttatatgttaatattacaaaattgtcatttatttgtgtgtgtattaaatttgacttttcatatttcaa-aacaaaatagt 44812589  T
Q  271 aatattaattaagagtatgtttagg 295  Q
    | ||||||||| | |||| ||||||    
T  44812588 agtattaattaggggtatctttagg 44812564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 52768968 - 52768892
Alignment:
Q  182 gtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||||| |||||||||| | |||||| |||||||| ||| |||||||||||||||||||||||||| || |||||||    
T  52768968 gtgtctattttgtgtgtgaatattacaaaattgtcatttatttgtatgtgtattaaatttgactttacagatttcaa 52768892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 189 - 292
Target Start/End: Original strand, 34643438 - 34643539
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtat 288  Q
    |||||| ||||| |||||  |||||||| |||||||||||||||||||||||| | |||||| ||||||| || || |||||| ||||||||||| ||||    
T  34643438 ttttgtatgttaatattaataaattgtc-tttgtttgtatgtgtattaaatttaatttttcatatttcaa-gataaattagtagtattaattaagggtat 34643535  T
Q  289 gttt 292  Q
    ||||    
T  34643536 gttt 34643539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 189 - 295
Target Start/End: Complemental strand, 10541319 - 10541214
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtat 288  Q
    |||||||| ||| |||||||||||| ||||||||||  |||||||||||||||||||||| | || |||| || | ||||||| ||||||||| |  |||    
T  10541319 ttttgtgtattaatattaccaaattatcctttgtttaaatgtgtattaaatttgactttttatatgtcaa-gatatgttagtagtattaattagggatat 10541221  T
Q  289 gtttagg 295  Q
    |||||||    
T  10541220 gtttagg 10541214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 222 - 295
Target Start/End: Original strand, 54359759 - 54359831
Alignment:
Q  222 tttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    |||||||||||||||||||| |||||||| ||||||| |||||| ||||| ||||||||| | |||||||||||    
T  54359759 tttgtatgtgtattaaatttaacttttcatatttcaa-gacaagatagtagtattaattaggtgtatgtttagg 54359831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 273
Target Start/End: Complemental strand, 54701368 - 54701269
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||||||||  ||| ||||| |||||||| |||   ||||||||| ||| |||||||||||||||||||| |||||||| ||||||| || |||||||    
T  54701368 agtgtaattaatatgtttgtttagtgtgttattat---caaattgtcatttatttgtatgtgtattaaatttaacttttcatatttcaa-gataagttag 54701273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 208 - 294
Target Start/End: Original strand, 726666 - 726751
Alignment:
Q  208 caaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttag 294  Q
    |||||| |||||||||||||||||   |||||||||||||||| ||||||| || ||||||| ||||||||||| | |||| |||||    
T  726666 caaattatcctttgtttgtatgtgggataaatttgacttttcatatttcaa-gataagttagcaatattaattaggggtatatttag 726751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 208 - 294
Target Start/End: Complemental strand, 754178 - 754093
Alignment:
Q  208 caaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttag 294  Q
    |||||| |||||||||||||||||   |||||||||||||||| ||||||| || ||||||| ||||||||||| | |||| |||||    
T  754178 caaattatcctttgtttgtatgtgggataaatttgacttttcatatttcaa-gataagttagcaatattaattaggggtatatttag 754093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 3094209 - 3094263
Alignment:
Q  173 gtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgta 227  Q
    |||||||| |||||| |||||||||||| ||||||||||||||| ||||||||||    
T  3094209 gtaattaatgtgtctattttgtgtgttaatattaccaaattgtcatttgtttgta 3094263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 21121023 - 21121115
Alignment:
Q  202 tattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| |||| |||| |||||||||||| ||||||||||| |||||| | |||| || |||||||||||| ||||||||| | ||| |||||||    
T  21121023 tattatcaaactgtcttttgtttgtatgcgtattaaatttaactttttatattttaa-gacaagttagtagtattaattaggggtacgtttagg 21121115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 18683609 - 18683536
Alignment:
Q  175 aattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttca 250  Q
    |||||| |||| | ||||||| |||| ||||||||| ||||||||||||||  | |||||||||||||||||||||    
T  18683609 aattaatgtgtttattttgtgcgttaatattaccaacttgtcctttgtttg--tttgtattaaatttgacttttca 18683536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 20791951 - 20792039
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||| ||||||  ||||| |||||||||||| ||||||  |||| || ||| ||||||| |||||||||||||| |||||| |||||||    
T  20791951 agtgcaattaatatgtctattttgtgtgttaatattacataattatcttttatttgtatatgtattaaatttgagttttcatatttcaa 20792039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 30866695 - 30866758
Alignment:
Q  185 tctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgactttt 248  Q
    |||||||||| || || ||||| ||||||||  |||||||||||||||||||| ||||||||||    
T  30866695 tctgttttgtatgctattattaacaaattgttatttgtttgtatgtgtattaattttgactttt 30866758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 209 - 361
Target Start/End: Original strand, 31917440 - 31917593
Alignment:
Q  209 aaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg---nnnnnnnnnn 305  Q
    |||||||  ||||||||||||||||||||||||||||||| | |||| || || ||| ||||| |||||||| || |||||||||||                 
T  31917440 aaattgtgttttgtttgtatgtgtattaaatttgactttttatattttaa-gataagatagtagtattaatt-agggtatgtttaggaaaaaatcataaa 31917537  T
Q  306 tgtatcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatg 361  Q
    || |||| ||||||| |||| || |||||||| |||||||||||||||||||||||    
T  31917538 tgcatctagtaatttgaaaaagggtttacatttaaggataaaaataaaatcaaatg 31917593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 258
Target Start/End: Original strand, 30049759 - 30049809
Alignment:
Q  208 caaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||||||| ||||||| |||||||||||||| ||||||||||| |||||||    
T  30049759 caaattgttctttgttagtatgtgtattaaagttgacttttcatatttcaa 30049809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 50438984 - 50438922
Alignment:
Q  94 attacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgtt 156  Q
    |||||| ||||||||||||||| ||  | |||||| | |||||||||||||||||||||||||    
T  50438984 attactccctccgtcccttaatataaccccccattacatttttcacatttcttaagaaatgtt 50438922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 309 - 390
Target Start/End: Original strand, 12624862 - 12624943
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatgactacattaagggacggagcgagta 390  Q
    |||| ||||||| ||||||  |||||||| ||||| |||||||||||||||||| ||  |||||  |||||||||| |||||    
T  12624862 atctagtaatttgaaaaggagtttacatttaaggacaaaaataaaatcaaatgggtgcttacatatagggacggagggagta 12624943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 26170309 - 26170260
Alignment:
Q  209 aaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||||||| ||| ||||||| ||||||||||||||||||||| |||||||    
T  26170309 aaattgtcatttatttgtatatgtattaaatttgacttttcatatttcaa 26170260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 36513367 - 36513306
Alignment:
Q  194 tgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaattt 255  Q
    ||||||| ||||| ||||||||  ||||||||||| |||||||||||||| |||||| ||||    
T  36513367 tgtgttaatattatcaaattgttttttgtttgtatatgtattaaatttgatttttcatattt 36513306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 54438481 - 54438526
Alignment:
Q  107 tcccttaatgtaggcacccattgcctttttcacatttcttaagaaa 152  Q
    |||||||||||||| | |||||| ||||||||||||||||||||||    
T  54438481 tcccttaatgtaggtatccattgtctttttcacatttcttaagaaa 54438526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 175
Target Start/End: Complemental strand, 40411751 - 40411671
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgccttttt-cacatttcttaagaaatgttctcaatgtaattaagtgta 175  Q
    |||| ||||||||||||||||||| |||  ||||  ||||| |||||||||||||||| ||| ||| | ||||||||||||    
T  40411751 tactccctccgtcccttaatgtagccacatattgttttttttcacatttcttaagaaaagttgtcagtataattaagtgta 40411671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 295
Target Start/End: Original strand, 49544991 - 49545058
Alignment:
Q  227 atgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||||||||||||| | |||| |||||| || || ||||||||| ||||||||| |||||||||||||    
T  49544991 atgtgtattaaatttaattttttaaattttaa-gataagttagtagtattaattaggagtatgtttagg 49545058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 56217160 - 56217112
Alignment:
Q  104 ccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaa 152  Q
    ||||||||||| |||| |||||||||| |||||||||||| ||||||||    
T  56217160 ccgtcccttaacgtagacacccattgcttttttcacattttttaagaaa 56217112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 309 - 360
Target Start/End: Original strand, 30050151 - 30050202
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaat 360  Q
    |||| |||||||||||| | ||||||||| ||| ||||||||||||||||||    
T  30050151 atctagtaatttaaaaaagaatttacatttaagaataaaaataaaatcaaat 30050202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 45079873 - 45079773
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtat 288  Q
    |||||||||||| ||||| |||||| | |||| ||| |||||  |||||||||| ||||||| |||||||    |||||| || ||||||||||| ||||    
T  45079873 ttttgtgtgttaatattagcaaattattctttctttctatgt--attaaatttggcttttcatatttcaagataaagttaatagtattaattaagggtat 45079776  T
Q  289 gtt 291  Q
    |||    
T  45079775 gtt 45079773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 315 - 362
Target Start/End: Original strand, 46729477 - 46729524
Alignment:
Q  315 taatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    |||||||||||| |||||||||| | ||| ||||||||||||||||||    
T  46729477 taatttaaaaagagatttacatttagggacaaaaataaaatcaaatgg 46729524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 11792604 - 11792653
Alignment:
Q  312 ttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    |||||||||||||| || |||||||| ||||| ||||||||||||||||||    
T  11792604 ttgtaatttaaaaaagg-tttacatttaaggacaaaaataaaatcaaatgg 11792653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 11861271 - 11861320
Alignment:
Q  312 ttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    |||||||||||||| || |||||||| ||||| ||||||||||||||||||    
T  11861271 ttgtaatttaaaaaagg-tttacatttaaggacaaaaataaaatcaaatgg 11861320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 23611410 - 23611361
Alignment:
Q  312 ttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    |||||||||||||| || |||||||| ||||| ||||||||||||||||||    
T  23611410 ttgtaatttaaaaaagg-tttacatttaaggacaaaaataaaatcaaatgg 23611361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 306 - 372
Target Start/End: Original strand, 26203294 - 26203360
Alignment:
Q  306 tgtatcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatgactacat 372  Q
    |||||||  |||||| ||||||  |||||||| ||||| |||| ||||||||||||||||| |||||    
T  26203294 tgtatctaataatttgaaaaggagtttacatttaaggacaaaagtaaaatcaaatggatgattacat 26203360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 309 - 383
Target Start/End: Original strand, 52676187 - 52676261
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatgactacattaagggacgga 383  Q
    ||||| |||||||||||||| |||||||| |   | |||||| ||||||||||| || |||||||||| ||||||    
T  52676187 atcttataatttaaaaaggggtttacatttagaaaaaaaaatcaaatcaaatgggtggctacattaagagacgga 52676261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 295
Target Start/End: Original strand, 3113446 - 3113514
Alignment:
Q  226 tatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||||||||||||||||||||||| |||||||  |||| |||||| ||| || ||| | ||||||||||    
T  3113446 tatgtgtattaaatttgacttttcatatttcaa-aacaaattagtagtatcaagtaaaaatatgtttagg 3113514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 20116437 - 20116486
Alignment:
Q  121 cacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaa 170  Q
    |||||||||| ||||||| |||| |||||||| ||| |||||||||||||    
T  20116437 cacccattgcatttttcatatttattaagaaaagttgtcaatgtaattaa 20116486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 362
Target Start/End: Original strand, 20792154 - 20792210
Alignment:
Q  306 tgtatcttgtaatttaaaaagggatttacattgaaggat-aaaaataaaatcaaatgg 362  Q
    ||||||| ||||||||||||| ||||||||||  ||||| ||||||||||||||||||    
T  20792154 tgtatctagtaatttaaaaagagatttacatt-taggatcaaaaataaaatcaaatgg 20792210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 3094409 - 3094464
Alignment:
Q  225 gtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    ||||||||||||||||| |||||||| ||||||| ||||| ||| || |||||||||    
T  3094409 gtatgtgtattaaatttaacttttcatatttcaa-gacaacttaatagtattaatta 3094464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 358 - 390
Target Start/End: Complemental strand, 5448654 - 5448622
Alignment:
Q  358 aatggatgactacattaagggacggagcgagta 390  Q
    |||||||| ||||||||||||||||||||||||    
T  5448654 aatggatgcctacattaagggacggagcgagta 5448622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 222 - 258
Target Start/End: Original strand, 25841983 - 25842019
Alignment:
Q  222 tttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||||||||||||||||||||| |||||| |||||||    
T  25841983 tttgtatgtgtattaaatttgatttttcatatttcaa 25842019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 28175894 - 28175941
Alignment:
Q  230 tgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaa 278  Q
    ||||||||||||||||||| | |||||||| |||| |||||||||||||    
T  28175894 tgtattaaatttgactttttatatttcaat-acaaattagtaatattaa 28175941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 29584854 - 29584910
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaa 152  Q
    |||||| ||||||| |  ||||| |||||| |||| |||||||||||||||||||||    
T  29584854 tacttcatccgtccatgtatgtaagcaccctttgcatttttcacatttcttaagaaa 29584910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 31552190 - 31552242
Alignment:
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgactttt 248  Q
    ||||| |||||| |||||||| ||| ||| |||||||||||||||||| ||||    
T  31552190 tgttaatattactaaattgtcatttatttatatgtgtattaaatttgattttt 31552242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 306 - 362
Target Start/End: Complemental strand, 52552454 - 52552398
Alignment:
Q  306 tgtatcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    |||||||  ||||||||||||||||||| ||| | ||| ||||||||| ||||||||    
T  52552454 tgtatctaataatttaaaaagggatttatatttagggacaaaaataaagtcaaatgg 52552398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 4e-52; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 96 - 390
Target Start/End: Original strand, 20123410 - 20123692
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    ||||||||||||||||  |||||  | ||| |||| ||||||||||||||||||||| ||| |||          |||||||||| ||||||||||||||    
T  20123410 tacttcctccgtccctatatgtaaactccctttgcttttttcacatttcttaagaaaagttgtca----------gtgtaattaatgtgtctgttttgtg 20123499  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| || |||||||||||  |||| |||||    
T  20123500 tgttaatattatcaaattgtcctttgtttgtatgtgtattaaatttgaattttcaaatttcaaagacaagttattagtattaattaagtatatgcttagg 20123599  T
Q  296 nnnnnnnnnntgtatcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatgactacattaagggacggagcgagta 390  Q
              || ||||||||||||  |||||| |||||||| | ||| |||||||||||||||||| || |||||||||||||||||| |||||    
T  20123600 -aaaaaaaaatgcatcttgtaattt-gaaaggggtttacatttagggacaaaaataaaatcaaatgggtggctacattaagggacggagggagta 20123692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 96 - 295
Target Start/End: Original strand, 1324668 - 1324856
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| |||| |||||||||||||  ||| |||||||||||||||||||||||||||||||| |||          |||||||||| ||||||||||||||    
T  1324668 tactccctctgtcccttaatgtatccactcattgcctttttcacatttcttaagaaatgttatca----------gtgtaattaatgtgtctgttttgtg 1324757  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| | ||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||| | |||||||||||    
T  1324758 tgttaatcttatcaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaagttagtagtattaattaggggtatgtttagg 1324856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 96 - 295
Target Start/End: Original strand, 48767524 - 48767713
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| ||| |||||||||||||||||||||||||| ||||||||||||||||| ||| ||| |||          |||||||||| ||||||||||||||    
T  48767524 tactccctacgtcccttaatgtaggcacccattgcttttttcacatttcttaaaaaacgttgtca----------gtgtaattaatgtgtctgttttgtg 48767613  T
Q  196 tgttagtattaccaaattgtcctttg-tttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttag 294  Q
    ||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||| |||| || ||||||||| | ||||||||||    
T  48767614 tgttaatattacgaaattgtcctttgttttgtatgtgtattaaatttgacttttcatatttcaa-gacatgttattagtattaattaggggtatgtttag 48767712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 96 - 295
Target Start/End: Complemental strand, 4089645 - 4089457
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| ||||| |||||||||||||||| |||||| |||||||||||||||||||||| ||| |||          |||||||||| ||||||||||||||    
T  4089645 tactccctccttcccttaatgtaggcatccattgactttttcacatttcttaagaaaagttgtca----------gtgtaattaatgtgtctgttttgtg 4089556  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| |||||| ||||| || ||||||||||| ||||||||||||||||||||| ||||||| |||||| ||||| ||||||||| | |||||||||||    
T  4089555 tgttaatattacgaaattatcttttgtttgtatatgtattaaatttgacttttcatatttcaa-gacaagatagtagtattaattaggggtatgtttagg 4089457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 2276658 - 2276534
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||| ||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||     
T  2276658 agtgtagttaatttgtctgttttgtgtgttaatattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa-gataagttac 2276560  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||||||||||| |||||||||||    
T  2276559 tagtattaattaagggtatgtttagg 2276534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 21388267 - 21388390
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagt 270  Q
    |||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||    
T  21388267 gtgtaattaatgtgtctgttttgtgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaattttaa-gataagttagt 21388365  T
Q  271 aatattaattaagagtatgtttagg 295  Q
    | ||||||||||  |||||||||||    
T  21388366 agtattaattaatggtatgtttagg 21388390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 96 - 295
Target Start/End: Complemental strand, 36726318 - 36726131
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||| |||||||| ||||| | |          |||||||||| |||| |||||||||    
T  36726318 tacttcctccgtcccttaatgtaggcatccattgcctttttcgcatctcttaagagatgttgtta----------gtgtaattaatgtgtttgttttgtg 36726229  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||  ||||||| ||| ||||||||| | ||| |||||||    
T  36726228 tgttaatattaccaaattgtcctttgttt-tatgtgtattaaatttgacttttcatatttcaa-aacaagttggtagtattaattaggggtaagtttagg 36726131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 106 - 281
Target Start/End: Original strand, 37673707 - 37673871
Alignment:
Q  106 gtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttagtatt 205  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||| | |          |||||||||| ||||||||||||||||||| ||||    
T  37673707 gtcccttaatgtagacacccattgtctttttcacatttcttaagaaatgttgtga----------gtgtaattaatgtgtctgttttgtgtgttaatatt 37673796  T
Q  206 accaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    |  |||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| || ||||||||||||    
T  37673797 atgaaattgtcttttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaagataataatattaatta 37673871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 170 - 294
Target Start/End: Original strand, 25750392 - 25750515
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||| |||||| ||||||| |||||| |||    
T  25750392 agtgtaattaatgtgtctgttttgtgtgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgatttttcatatttcaa-gacaaggtag 25750490  T
Q  270 taatattaattaagagtatgtttag 294  Q
    |||||||||||| | ||||||||||    
T  25750491 taatattaattaggggtatgtttag 25750515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 102 - 281
Target Start/End: Original strand, 36116287 - 36116455
Alignment:
Q  102 ctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttag 201  Q
    |||||||||||||||||||||  ||||| |||||||||||||||||||||||||| ||           |||||||||| ||||||||||| |||||||     
T  36116287 ctccgtcccttaatgtaggcattcattgtctttttcacatttcttaagaaatgttgtcg----------gtgtaattaatgtgtctgttttatgtgttaa 36116376  T
Q  202 tattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||| | ||||||| |||||| || ||||||||||||    
T  36116377 tattacgaaattgtcatttgtttgtatgtgtattaaatttgactttttatatttcaa-gacaagataataatattaatta 36116455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 21809726 - 21809606
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagta 271  Q
    ||||||||| ||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||    
T  21809726 tgtaattaatgtgtctgttttttgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaa-aacaagttagta 21809628  T
Q  272 atattaattaagagtatgttta 293  Q
     ||||||||| | |||||||||    
T  21809627 gtattaattaggggtatgttta 21809606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 170 - 294
Target Start/End: Original strand, 10685109 - 10685232
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||  |||    
T  10685109 agtgtaattaatgtgtctgttttatgtgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaaaatag 10685207  T
Q  270 taatattaattaagagtatgtttag 294  Q
    |||||||||||| | ||| ||||||    
T  10685208 taatattaattatgggtacgtttag 10685232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 96 - 295
Target Start/End: Original strand, 49100631 - 49100819
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| |||| |||||||||||||| ||||||||||||||||| ||| |||||| | | ||| |||          |||||||||| ||||||||||| ||    
T  49100631 tactccctctgtcccttaatgtagccacccattgcctttttcgcatctcttaaaataagttgtca----------gtgtaattaatgtgtctgttttatg 49100720  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| || ||  || |||||||||||| | |||||||||||    
T  49100721 tgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaa-gataaaataataatattaattaggggtatgtttagg 49100819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 19236148 - 19236024
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||||| ||||||| ||||| |||||||| ||||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||||||    
T  19236148 agtgtaattaatgtgtcggttttgtatgttaatattaccatattgttctttgtttgtatgtgtattaaatttgatttttcatatttcaa-gacaagttag 19236050  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||||||||| | |||||||||||    
T  19236049 tagtattaattaggggtatgtttagg 19236024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 170 - 294
Target Start/End: Original strand, 37048059 - 37048181
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||| ||| |||| |||||||| |||||||||    
T  37048059 agtgtaattaatgtgtctgttttgtgtgttaatgttcccaaattgtcctttgtttgtatgtgtattaaatttaactattcatatttcaat-acaagttag 37048157  T
Q  270 taatattaattaagagtatgtttag 294  Q
    || |||||||| || ||||||||||    
T  37048158 tagtattaatt-agggtatgtttag 37048181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 6376214 - 6376089
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaag-tta 268  Q
    ||||||||||| || |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||| ||||||||||||| || |||||| |||    
T  6376214 agtgtaattaatgtctctgttttgtgtgttaatattactaaattgtcatttgtttgtatgtgtattaaatttaacttttcaaattttaa-gacaagttta 6376116  T
Q  269 gtaatattaattaagagtatgtttagg 295  Q
     || ||||||||| |||||||||||||    
T  6376115 atattattaattaggagtatgtttagg 6376089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 172 - 278
Target Start/End: Complemental strand, 43601243 - 43601139
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagta 271  Q
    ||||||| ||||||||||||||| ||| |||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||    
T  43601243 tgtaattgaggtgtctgttttgt-tgtaagtattacaaaattgtcctttgtttatatgtgtattaaatttgacttttcatatttcaa-gacaagttagta 43601146  T
Q  272 atattaa 278  Q
    |||||||    
T  43601145 atattaa 43601139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 170 - 258
Target Start/End: Complemental strand, 43465224 - 43465136
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  43465224 agtgtaattaatgtgtctgttttgtgtgttagtattttcaaattgtcttttgtttgtatgtgtattaaatttgacttttcatatttcaa 43465136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 170 - 293
Target Start/End: Original strand, 33181319 - 33181441
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||| |||| |||| |||||||| | ||| ||||||||||||||| |||||||||||||||||||||||| |||||||| | || || ||||||||||    
T  33181319 agtgtagttaatgtgtttgttttgtatattaatattaccaaattgtcatttgtttgtatgtgtattaaatttaacttttcatactttaa-gacaagttag 33181417  T
Q  270 taatattaattaagagtatgttta 293  Q
    |||||||||||| |||||||||||    
T  33181418 taatattaattaggagtatgttta 33181441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 172 - 294
Target Start/End: Complemental strand, 48610215 - 48610094
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagta 271  Q
    ||||||||| ||||||||||||||| ||| |||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| ||||     
T  48610215 tgtaattaatgtgtctgttttgtgtattaatattacgaaattgtcttttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaagatagtg 48610117  T
Q  272 atattaattaagagtatgtttag 294  Q
     ||||||||| |  |||||||||    
T  48610116 gtattaattagggatatgtttag 48610094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 103 - 293
Target Start/End: Original strand, 35128353 - 35128530
Alignment:
Q  103 tccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttagt 202  Q
    |||||||||||||||| ||||| |||| |||||||||||||  ||||||| ||| |||          ||||||||||  |||||||||||||||||| |    
T  35128353 tccgtcccttaatgtaagcacctattgtctttttcacattt--taagaaaagttgtca----------gtgtaattaatatgtctgttttgtgtgttaat 35128440  T
Q  203 attaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgttta 293  Q
    ||||  ||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||| |  || ||||||||| | |||||||||    
T  35128441 attatgaaattgtcctttgtttgtatgtgtattaaatttgaattttcatatttcaa-gacaagatgatagtattaattaggggtatgttta 35128530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 42983694 - 42983571
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagt 270  Q
    |||||||||| |||||| |||| | ||||| |||||  |||||||| | ||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  42983694 gtgtaattaatgtgtctcttttatatgttaatattattaaattgtcttatgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaagttagt 42983596  T
Q  271 aatattaattaagagtatgtttagg 295  Q
    | ||||||||||  |||||||||||    
T  42983595 agtattaattaatggtatgtttagg 42983571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 5334476 - 5334366
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||| |||||||| ||||| |||||||||| | || ||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  5334476 agtgtaattaatgtgtttgttttgtatgttaatattaccaaactatcatttgtttgtatgtgtattaaatttgacttttcaaatttcaa-gacaaattag 5334378  T
Q  270 taatattaatta 281  Q
    |  |||||||||    
T  5334377 tggtattaatta 5334366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 31373774 - 31373691
Alignment:
Q  175 aattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||||| |||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31373774 aattaatgtgtctattttgtgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaa 31373691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 171 - 281
Target Start/End: Original strand, 40263736 - 40263845
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagt 270  Q
    |||||||||| ||||||||||||  ||||| |||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||| || ||| ||||    
T  40263736 gtgtaattaatgtgtctgttttgattgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaa-gataagatagt 40263834  T
Q  271 aatattaatta 281  Q
    | |||||||||    
T  40263835 agtattaatta 40263845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 18122123 - 18121999
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||  ||||||||||| ||||||| |||||| ||||| ||||||||||| |||||||| ||||||||||||||| ||||||| || |||||||    
T  18122123 agtgtaattagtgtgtctgttttatgtgttaatattactaaattttcctttgtttgaatgtgtataaaatttgacttttcatatttcaa-gataagttag 18122025  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || |||||||||   |||||||||||    
T  18122024 tagtattaattagacgtatgtttagg 18121999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 21801135 - 21801015
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagta 271  Q
    ||||||||| ||||||||||||||||||| |||||| |||||||| ||| ||||||||||||||||||||||||||| | |||||||  | || ||| ||    
T  21801135 tgtaattaatgtgtctgttttgtgtgttaatattactaaattgtcatttatttgtatgtgtattaaatttgactttttatatttcaa-aataaattaata 21801037  T
Q  272 atattaattaagagtatgttta 293  Q
     ||||||||| |||||||||||    
T  21801036 gtattaattaggagtatgttta 21801015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 37491700 - 37491576
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| |||||| |||||| |||| | ||||| |||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||| | ||| || |    
T  37491700 agtgcaattaatgtgtctattttatatgttaatattaccaaattatcctttgtttgtatatgtattaaatttgacttttcatatttcaa-ggcaaatttg 37491602  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    |||||||||||| | |||||||||||    
T  37491601 taatattaattaggggtatgtttagg 37491576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 46783922 - 46783800
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| |||||| |||||| | || ||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||| || |||||||    
T  46783922 agtgaaattaatgtgtctatcttatgtgttaatattaccaaattgtcttttgttcgtatgtgtattaaatttgacttttcatatttcaa-gataagttag 46783824  T
Q  270 taatattaattaagagtatgtttag 294  Q
    || |||||||| |||| ||||||||    
T  46783823 tagtattaatt-agagcatgtttag 46783800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 48193639 - 48193749
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||||| |||||||||||| |||||||||||| |||||||||| |||  |||||||||||||||||||| ||||||| ||||| ||||    
T  48193639 agtgtaattaatgtgtctattttgtgtgttaatattaccaaattatcctttgtttatattagtattaaatttgacttttcatatttcaa-gacaaattag 48193737  T
Q  270 taatattaatta 281  Q
    |  |||||||||    
T  48193738 ttgtattaatta 48193749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 10408629 - 10408527
Alignment:
Q  190 tttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatg 289  Q
    ||||||||| | | |||| || |||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||| ||||||||| | |||||    
T  10408629 tttgtgtgtgaattttactaatttgtcctttgtttgtatgtgtattaaatttgatttttcatatttcaatg-caagttagtagtattaattaggggtatg 10408531  T
Q  290 ttta 293  Q
    ||||    
T  10408530 ttta 10408527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 172 - 271
Target Start/End: Complemental strand, 29636119 - 29636022
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagta 271  Q
    ||||||||| ||||||||||||||||||| ||||||||||||| ||||||||| |||||||||| ||||| | |||||| ||||||| ||||||||||||    
T  29636119 tgtaattaatgtgtctgttttgtgtgttaatattaccaaattg-cctttgtttttatgtgtatttaatttaatttttcatatttcaa-gacaagttagta 29636022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 170 - 292
Target Start/End: Complemental strand, 21392974 - 21392853
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| |||||| |||||| ||||| |||||| |||||||||||| |  ||||||||||||||||||||||||||||||| | ||||||| |||| |||||    
T  21392974 agtgcaattaatgtgtctattttgagtgttaatattaccaaattatattttgtttgtatgtgtattaaatttgactttttatatttcaa-gacatgttag 21392876  T
Q  270 taatattaattaagagtatgttt 292  Q
    ||   ||||||| ||||||||||    
T  21392875 tagatttaattaggagtatgttt 21392853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 183 - 288
Target Start/End: Original strand, 27213524 - 27213628
Alignment:
Q  183 tgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaa 282  Q
    ||||| |||||||||||| |||||| |||||||||||||||||||||| ||||||| ||||| ||||| ||||||| ||||||||| || |||| ||||     
T  27213524 tgtctattttgtgtgttaatattactaaattgtcctttgtttgtatgtctattaaaattgacatttcatatttcaa-gacaagttaatagtatttattag 27213622  T
Q  283 gagtat 288  Q
    ||||||    
T  27213623 gagtat 27213628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 175 - 295
Target Start/End: Original strand, 28663784 - 28663903
Alignment:
Q  175 aattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaata 274  Q
    |||||| |||||| |||||||||||| ||||| |||||| |  ||||||||||||| ||||||||||||||| ||| ||||||| || || |||||| ||    
T  28663784 aattaatgtgtctattttgtgtgttaatattatcaaattattatttgtttgtatgtatattaaatttgacttctcatatttcaa-gataaattagtagta 28663882  T
Q  275 ttaattaagagtatgtttagg 295  Q
    ||||||| | |||||||||||    
T  28663883 ttaattaggggtatgtttagg 28663903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 189 - 295
Target Start/End: Complemental strand, 27162966 - 27162860
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgac-ttttcaaatttcaatgacaagttagtaatattaattaagagta 287  Q
    |||||||| ||| |||| |||||||||| |||||||||||||||||||||||| || |||||| ||||||| ||||||||| || |||||||||  ||||    
T  27162966 ttttgtgttttaatattgccaaattgtcatttgtttgtatgtgtattaaatttaactttttcatatttcaa-gacaagttaatagtattaattagaagta 27162868  T
Q  288 tgtttagg 295  Q
    ||||||||    
T  27162867 tgtttagg 27162860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 40740976 - 40741100
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttg--tatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||||||  ||||| |||||||||||| |||||||||||| || ||| ||||  ||||||| ||||||||||||||||| ||||||| || |||||||    
T  40740976 tgtaattaatatgtctattttgtgtgttaatattaccaaattatcatttctttgtatatgtgtgttaaatttgacttttcatatttcaa-gataagttag 40741074  T
Q  270 taatattaattaagagtatgtttagg 295  Q
     | ||||||||| | |||||||||||    
T  40741075 cagtattaattaggggtatgtttagg 40741100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 189 - 258
Target Start/End: Original strand, 21752571 - 21752640
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    ||||||| |||| |||||||||||| || ||||||||||||||||||||||||||||||||| |||||||    
T  21752571 ttttgtgggttaatattaccaaattatcatttgtttgtatgtgtattaaatttgacttttcacatttcaa 21752640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 26632870 - 26632994
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||| |||| |||||| |||| ||||||| |||||| ||||| || |||||||||||||| ||||||||||||||||   ||||||| ||||| ||||    
T  26632870 agtgtagttaatgtgtctattttatgtgttaatattactaaattatcttttgtttgtatgtgcattaaatttgactttttgtatttcaa-gacaaattag 26632968  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    ||  |||||||| | |||||||||||    
T  26632969 taggattaattaggggtatgtttagg 26632994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 196 - 283
Target Start/End: Complemental strand, 24700751 - 24700665
Alignment:
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaag 283  Q
    ||||| |||||||||||||| |||||||||||||||||||||  ||||||||||| |||||||  | ||||||||| |||||||||||    
T  24700751 tgttaatattaccaaattgttctttgtttgtatgtgtattaatgttgacttttcatatttcaa-aataagttagtagtattaattaag 24700665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 182 - 281
Target Start/End: Complemental strand, 26201037 - 26200939
Alignment:
Q  182 gtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    |||||| |||||||| ||| ||||| |||||| | ||||||||||||||||||||||||| |||||||| |||| ||  ||||||||||| |||||||||    
T  26201037 gtgtctattttgtgtattaatattatcaaattattctttgtttgtatgtgtattaaatttaacttttcatattttaa-aacaagttagtagtattaatta 26200939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 170 - 293
Target Start/End: Original strand, 27170036 - 27170157
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| ||||||  ||||| |||||||||| | ||||||||||||||  ||||||  ||||| ||||||||||||||||||| ||||||| ||||| |||     
T  27170036 agtgcaattaatttgtctattttgtgtgtaa-tattaccaaattgtgatttgttcatatgtctattaaatttgacttttcatatttcaa-gacaaattaa 27170133  T
Q  270 taatattaattaagagtatgttta 293  Q
    || ||||||||| |||||||||||    
T  27170134 tagtattaattatgagtatgttta 27170157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 189 - 295
Target Start/End: Original strand, 23876080 - 23876185
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtat 288  Q
    |||| ||||||| |||||| |||||||| |||||||||||||||||||||||| |||||||  ||||||| ||||| ||||||  ||||||||   ||||    
T  23876080 ttttatgtgttaatattactaaattgtcttttgtttgtatgtgtattaaatttaacttttcgtatttcaa-gacaaattagtatgattaattagtggtat 23876178  T
Q  289 gtttagg 295  Q
    |||||||    
T  23876179 gtttagg 23876185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 190 - 295
Target Start/End: Complemental strand, 28038950 - 28038845
Alignment:
Q  190 tttgtgtgttagtattaccaaattgtccttt-gtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtat 288  Q
    ||||||||||| ||||||||||| ||  ||| |||||||| |||||||||||| |||||||| ||||||| |||||||||| | ||||||||| || |||    
T  28038950 tttgtgtgttaatattaccaaatggtttttttgtttgtatttgtattaaatttaacttttcatatttcaa-gacaagttagcagtattaattatgaatat 28038852  T
Q  289 gtttagg 295  Q
    |||||||    
T  28038851 gtttagg 28038845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 175 - 281
Target Start/End: Complemental strand, 42993264 - 42993159
Alignment:
Q  175 aattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaata 274  Q
    |||||| |||||| |||| ||||||| ||||| ||||||  |||||||| ||||||||||||||||||| |||||| ||||||| || || ||| |||||    
T  42993264 aattaacgtgtctattttatgtgttaatattatcaaattaacctttgttagtatgtgtattaaatttgatttttcatatttcaa-gataatttaataata 42993166  T
Q  275 ttaatta 281  Q
    |||||||    
T  42993165 ttaatta 42993159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 203 - 295
Target Start/End: Complemental strand, 13907791 - 13907700
Alignment:
Q  203 attaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    |||| ||||||||| ||||||||||||| || |||||||||||||||| |||| || |||||||||||| ||||||||| | || ||||||||    
T  13907791 attatcaaattgtcatttgtttgtatgtttaataaatttgacttttcatattt-aaagacaagttagtagtattaattaggggtgtgtttagg 13907700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 171 - 233
Target Start/End: Complemental strand, 40211357 - 40211295
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgta 233  Q
    |||||||||| ||||||||||||||||||| |||||| |||||||| ||| ||||||||||||    
T  40211357 gtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcatttatttgtatgtgta 40211295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 281
Target Start/End: Original strand, 29723419 - 29723595
Alignment:
Q  94 attacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgtttt- 192  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||| |||  |||| |       || |||    |||||||| ||| |||||||     
T  29723419 attactccctccgtcccttaatgtaggcacccattgtctttttcacattttttagaaaattt-------gtcatt----gtaattaatgtgcctgttttt 29723507  T
Q  193 gtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    ||||| || |||||| ||||  || |||||||| || | ||||||||||||||||||| |||||||  ||||| ||||| |||||||||    
T  29723508 gtgtggtaatattacgaaataatcatttgtttgcatatatattaaatttgacttttcatatttcaa-cacaagatagtagtattaatta 29723595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 206 - 295
Target Start/End: Original strand, 37136241 - 37136329
Alignment:
Q  206 accaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    |||||||| || ||||||||||||||| ||||||||||||||||| |||| || || |||||||  |||||||||| | |||||||||||    
T  37136241 accaaattatcatttgtttgtatgtgtgttaaatttgacttttcatattttaa-gataagttagcgatattaattaggggtatgtttagg 37136329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 47458248 - 47458196
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaattt 241  Q
    |||||||||||| |||||  |||||||||||||||||||||||||||||||||    
T  47458248 ttttgtgtgttaatattatgaaattgtcctttgtttgtatgtgtattaaattt 47458196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 35960407 - 35960490
Alignment:
Q  175 aattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||||| |||||| |||| ||| ||  |||||| ||||| || ||||||||||||||| ||||||||||||||||| |||||||    
T  35960407 aattaatgtgtctattttatgtatttatattactaaattatcttttgtttgtatgtgtgttaaatttgacttttcatatttcaa 35960490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 172 - 258
Target Start/End: Complemental strand, 44648796 - 44648708
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtatt--accaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||||| || |||||| |||||| ||||| ||||  | ||||||||| || ||||||||||||||||||||||| |||||| |||||||    
T  44648796 tgtaatcaatgtgtctattttgtatgttaatattggatcaaattgtctttagtttgtatgtgtattaaatttgatttttcatatttcaa 44648708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 25099056 - 25098993
Alignment:
Q  93 aattacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgtt 156  Q
    ||||||| ||||||||||||||| ||  | |||||||| ||||||||||||||||| |||||||    
T  25099056 aattactccctccgtcccttaatataaccccccattgcatttttcacatttcttaaaaaatgtt 25098993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 10593964 - 10593915
Alignment:
Q  232 tattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    |||||||||||| |||||| ||||||| |||||||||||| |||||||||    
T  10593964 tattaaatttgatttttcatatttcaaagacaagttagtactattaatta 10593915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 2409962 - 2409906
Alignment:
Q  202 tattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||||| || ||||||||| ||||||||| ||||||||||| ||||||| |||||||    
T  2409962 tattactaagttgtcctttatttgtatgtatattaaatttgtcttttcatatttcaa 2409906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 10595174 - 10595113
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaa 237  Q
    |||||||  ||||||||||||||||||  ||||| ||| |||| ||||||||||||||||||||    
T  10595174 taattaatatgtctgttttgtgtgtta--attacgaaactgtcttttgtttgtatgtgtattaa 10595113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 138
Target Start/End: Original strand, 33181114 - 33181157
Alignment:
Q  95 ttacttcctccgtcccttaatgtaggcacccattgcctttttca 138  Q
    |||||||||||||| |||||||||||||| |||||| |||||||    
T  33181114 ttacttcctccgtctcttaatgtaggcactcattgcatttttca 33181157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 36858365 - 36858415
Alignment:
Q  314 gtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatg 365  Q
    |||||||||||| || |||||||| ||||| |||||||||||||||||||||    
T  36858365 gtaatttaaaaaagg-tttacatttaaggacaaaaataaaatcaaatggatg 36858415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 281
Target Start/End: Complemental strand, 38729724 - 38729662
Alignment:
Q  218 tttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    |||||||||||||||||||||||| | |||||| |||| || |||||| |||| ||||||||||    
T  38729724 tttgtttgtatgtgtattaaattttatttttcatattttaa-gacaagctagtgatattaatta 38729662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 209 - 295
Target Start/End: Original strand, 21759783 - 21759868
Alignment:
Q  209 aaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    |||| ||| |||||||| ||| ||||||||||| |||||||  ||||||| ||||| ||||||  |||||||| | |||||||||||    
T  21759783 aaatagtcttttgtttgaatgggtattaaatttaacttttcgtatttcaa-gacaaattagtaggattaattacgggtatgtttagg 21759868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 390
Target Start/End: Complemental strand, 25098322 - 25098244
Alignment:
Q  312 ttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatgactacattaagggacggagcgagta 390  Q
    ||||||||| |||| ||||||||||| ||||| |||||||||| |||| || ||  |||||  |||||||||| |||||    
T  25098322 ttgtaatttgaaaaaggatttacatttaaggacaaaaataaaaacaaaagggtggttacatatagggacggagggagta 25098244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 29983465 - 29983514
Alignment:
Q  312 ttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    |||||||||||||| | ||||||||| ||||| ||||||||||||||||||    
T  29983465 ttgtaatttaaaaaag-atttacatttaaggacaaaaataaaatcaaatgg 29983514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 390
Target Start/End: Complemental strand, 5333838 - 5333757
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatgactacattaagggacggagcgagta 390  Q
    |||| ||||||||||||||| |||||||| | ||| ||||||||| ||||||| |||  |||||  |||||| ||| |||||    
T  5333838 atctagtaatttaaaaaggggtttacatttagggacaaaaataaagtcaaatgtatgtttacatatagggaccgagggagta 5333757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 41672648 - 41672591
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgta 227  Q
    ||||||||||| |||||| |||||||||| | ||| || ||||| |||||||||||||    
T  41672648 agtgtaattaatgtgtctattttgtgtgtgaatataactaaattatcctttgtttgta 41672591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 314 - 362
Target Start/End: Complemental strand, 2276513 - 2276465
Alignment:
Q  314 gtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    ||||||| ||||| |||||||||| | ||| ||||||||||||||||||    
T  2276513 gtaatttgaaaagcgatttacatttagggacaaaaataaaatcaaatgg 2276465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 4068442 - 4068494
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaattt 241  Q
    |||||| ||||| ||||| |||||| | |||||||||||||||||||| ||||    
T  4068442 ttttgtatgttaatattatcaaattattctttgtttgtatgtgtattagattt 4068494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 10685250 - 10685302
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatg 361  Q
    |||| ||||||| ||||||| |||||||| | ||| |||||||||||||||||    
T  10685250 atctagtaatttgaaaaggggtttacatttagggacaaaaataaaatcaaatg 10685302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 18122179 - 18122127
Alignment:
Q  104 ccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgtt 156  Q
    ||||| |||||||||  || |||||| |||||||||||||||||||||| |||    
T  18122179 ccgtctcttaatgtatacatccattgtctttttcacatttcttaagaaaagtt 18122127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 19477445 - 19477413
Alignment:
Q  218 tttgtttgtatgtgtattaaatttgacttttca 250  Q
    ||||||||||||||||||||||| |||||||||    
T  19477445 tttgtttgtatgtgtattaaattcgacttttca 19477413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 20124148 - 20124204
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaa 152  Q
    |||| |||||||||||||||||| || ||  |||| |||||||||||| ||||||||    
T  20124148 tactccctccgtcccttaatgtaagccccttttgcttttttcacattttttaagaaa 20124204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 21388202 - 21388258
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaa 152  Q
    |||||||||||||||||||| ||  | | | |||| |||||||||||||||||||||    
T  21388202 tacttcctccgtcccttaatttaaactctctttgcttttttcacatttcttaagaaa 21388258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 314 - 366
Target Start/End: Complemental strand, 47458121 - 47458069
Alignment:
Q  314 gtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatga 366  Q
    |||||||||||||| ||||||||| | ||| ||||||||||| |||| |||||    
T  47458121 gtaatttaaaaaggaatttacatttagggacaaaaataaaattaaatagatga 47458069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 3e-50; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 95 - 295
Target Start/End: Original strand, 30475999 - 30476188
Alignment:
Q  95 ttacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgt 194  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||          |||||||||| |||||||||||||    
T  30475999 ttactccctccgtcccttaatgtaggcacccattgcctttttcacattttttaagaaaagttgtca----------gtgtaattaatgtgtctgttttgt 30476088  T
Q  195 gtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttag 294  Q
    |||||| |||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||| || ||| ||||| ||||||||| | ||||||||||    
T  30476089 gtgttaatattacgaaattgtcctttgtttgtatgtctattaaatttgacttttcatatttcaa-gagaagatagtagtattaattaggggtatgtttag 30476187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 107 - 295
Target Start/End: Original strand, 40645644 - 40645821
Alignment:
Q  107 tcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttagtatta 206  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||           |||||||||| ||||||||||||||||||| |||||    
T  40645644 tcccttaatgtaggcatccattgcctttttcacatttcttaagaaatgttgtct----------gtgtaattaatgtgtctgttttgtgtgttaatatta 40645733  T
Q  207 ccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    |||||||||| ||||||||||||||||||||| |||  |||||| ||||||| ||||||||| || ||||||||| | |||||||||||    
T  40645734 ccaaattgtcttttgtttgtatgtgtattaaacttggtttttcatatttcaa-gacaagttattagtattaattaggggtatgtttagg 40645821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 96 - 295
Target Start/End: Complemental strand, 12077890 - 12077702
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||| ||| |||          |||||||||| |||||| |||||||    
T  12077890 tacttcatccgtcccttaatgtaggcacccattgcatttttcaaatttcttaagaaaagttgtca----------gtgtaattaatgtgtctcttttgtg 12077801  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| |||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||  ||||| ||| | ||||||||| | |||||||||||    
T  12077800 tgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaa-aacaagatagaagtattaattaggggtatgtttagg 12077702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 108 - 293
Target Start/End: Complemental strand, 41727373 - 41727199
Alignment:
Q  108 cccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttagtattac 207  Q
    |||||||||||| || ||||||||||||||||||||||||| ||| ||| |||          |||||||||| ||||||||||||||||||| ||||||    
T  41727373 cccttaatgtagccatccattgcctttttcacatttcttaaaaaaagttgtca----------gtgtaattaatgtgtctgttttgtgtgttaatattac 41727284  T
Q  208 caaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgttta 293  Q
     |||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||| |||| |||||||||| | |||||||||    
T  41727283 aaaattgtcctttatttgtatgtgtattaaatttgacttttcatatttcaa-gacaagatagtgatattaattaggggtatgttta 41727199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 170 - 283
Target Start/End: Complemental strand, 46435813 - 46435702
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||    
T  46435813 agtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcctttgtttgta--tgtattaaatttgacttttcaaatttcaaagacaagttag 46435716  T
Q  270 taatattaattaag 283  Q
    || |||||||||||    
T  46435715 tagtattaattaag 46435702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 26517298 - 26517174
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  26517298 agtgtaattaatgtgtctgttttctgtgttaatattaccaaattgtcctttatttgtatgtgtattaaatttgacttttcatatttcaa-gacaagttag 26517200  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||||||||| | |||||||||||    
T  26517199 tagtattaattaggggtatgtttagg 26517174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 170 - 293
Target Start/End: Original strand, 51263105 - 51263227
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| || || |||||||    
T  51263105 agtgtaattaatgtgtctgttttatgtgttagtattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcatattt-aaagataagttag 51263203  T
Q  270 taatattaattaagagtatgttta 293  Q
    || |||||||||| ||||||||||    
T  51263204 tagtattaattaaaagtatgttta 51263227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 50363050 - 50363174
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||||||||  |||||||||| ||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  50363050 agtgtaattaatatgtctgttttatgtattaatattaccaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaagttag 50363148  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||||||||| | |||||||||||    
T  50363149 tagtattaattaggggtatgtttagg 50363174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 14645972 - 14645849
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  14645972 agtgtaattaatgtgtctattttgtgtgttaatattaccaaattgttatttgtttgtatgtgtattaaatttgatttttcaaatttcaa-gacaagttag 14645874  T
Q  270 taatattaattaagagtatgtttag 294  Q
    || |||||| || | ||||||||||    
T  14645873 tagtattaactaggggtatgtttag 14645849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 96 - 295
Target Start/End: Complemental strand, 29676886 - 29676698
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||  || |||          |||||||||| |||||| |||| ||    
T  29676886 tactccctccgtcccttaatgtaggcacccattgcctttttcatatttcttaagaaaaattgtca----------gtgtaattaatgtgtctattttatg 29676797  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| |||||| |||||||| ||| ||||||||||||||||||||| | ||||| ||||||| |||||| ||||  ||||||||| | |||||||||||    
T  29676796 tgttaatattacgaaattgtcttttatttgtatgtgtattaaatttggcatttcatatttcaa-gacaagatagtggtattaattaggggtatgtttagg 29676698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 31819430 - 31819553
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagt 270  Q
    |||||||||| ||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||  ||||    
T  31819430 gtgtaattaatgtgtctgttttatgtgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaatatagt 31819528  T
Q  271 aatattaattaagagtatgtttagg 295  Q
    | ||||||||| | |||||||||||    
T  31819529 agtattaattaggggtatgtttagg 31819553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 96 - 295
Target Start/End: Complemental strand, 50525123 - 50524935
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| |||| ||||||||||||| |||||| || | ||||||||||||||||||||| | ||||           | ||||||||  ||| | |||||||    
T  50525123 tactccctctgtcccttaatgtaagcacccttttcttttttcacatttcttaagaaaagctctcg----------gggtaattaatatgtatattttgtg 50525034  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| | ||||||| | |||||||||||    
T  50525033 tgttaatattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttgaaatttcaa-gacaagttagtagttttaattaggggtatgtttagg 50524935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 96 - 295
Target Start/End: Complemental strand, 27638224 - 27638036
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| ||||||||| ||||| |||||| ||||| ||||||||||||||||||||||| |||         |||| |||||||||| || ||| |||||||    
T  27638224 tactgcctccgtcctttaatataggcatccattacctttttcacatttcttaagaaaagtt---------atta-gtgtaattaatgtctctattttgtg 27638135  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| |||||  |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||| ||||  ||||||||| | |||||||||||    
T  27638134 tgttaatattataaaattgtcctttgtttgtatgtgtattaaatttgacatttcatatttcaa-gacaagatagtggtattaattaggggtatgtttagg 27638036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 96 - 281
Target Start/End: Original strand, 46048480 - 46048655
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgccttttt-cacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgt 194  Q
    |||| ||||||  ||||||||||||||| ||| |||||||| |||||||||||||||| ||| |||          |||||||||| |||||||||||||    
T  46048480 tactccctccgctccttaatgtaggcactcatcgccttttttcacatttcttaagaaaagttgtca----------gtgtaattaatgtgtctgttttgt 46048569  T
Q  195 gtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    || ||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| | |||||||    
T  46048570 gtattaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaagatagtagtgttaatta 46048655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 41308859 - 41308735
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||||||||||||||||||| ||||||||| || | |||||||| ||||||||||||||||| ||||||| ||||||| ||||||||||    
T  41308859 agtgtaattaatgtgtctgttttgtgtgttaatattaccaatttattctttgtttatatgtgtattaaatttggcttttcatatttcaa-gacaagttag 41308761  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||||||||| | |||||||||||    
T  41308760 tagtattaattaggggtatgtttagg 41308735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 174 - 295
Target Start/End: Original strand, 42891446 - 42891566
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaat 273  Q
    |||||||  |||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||| || |||||||||||  |    
T  42891446 taattaatttgtctgttttgtgtgttaatattaccaaactgtcctttgtttgtatgtatattaaatttgacttttcaaattt-aaagacaagttagtggt 42891544  T
Q  274 attaattaagagtatgtttagg 295  Q
    |||||||| | |||||||||||    
T  42891545 attaattaggggtatgtttagg 42891566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 44083652 - 44083774
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagta 271  Q
    ||||||||| || ||| |||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||| ||||||| || ||||||||     
T  44083652 tgtaattaatgtatctattttgtgtgttaatattaccaaattatcatttgtttgtatgtgtattaaatttgacttttcatatttcaa-gataagttagtg 44083750  T
Q  272 atattaattaagagtatgtttagg 295  Q
    |||||||||| | |||||||||||    
T  44083751 atattaattaggggtatgtttagg 44083774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 177 - 295
Target Start/End: Original strand, 35055816 - 35055933
Alignment:
Q  177 ttaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatatt 276  Q
    |||| |||||| |||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||| | |||||||| ||||||||||| ||||    
T  35055816 ttaatgtgtctattttgtgtgttaatattaccaaattgtcatttgcttgtatgtgtattaaatttgactttttatatttcaat-acaagttagtagtatt 35055914  T
Q  277 aattaagagtatgtttagg 295  Q
    ||||| | |||||||||||    
T  35055915 aattatgggtatgtttagg 35055933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 174 - 295
Target Start/End: Complemental strand, 13084437 - 13084317
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaat 273  Q
    ||||||| ||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||| ||  |||||||||||      
T  13084437 taattaatgtgtctgttttgtgtgttaatattaccaaattatcttttgtttgtatgtgtattaaatttgacttttcaaattttaa-cacaagttagtagc 13084339  T
Q  274 attaattaagagtatgtttagg 295  Q
    |||||||| |  ||||||||||    
T  13084338 attaattagggatatgtttagg 13084317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 20945383 - 20945259
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||||| |||| ||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||| |||| || ||||||||||    
T  20945383 agtgtaattaatgtgtctattttatgtgttaatattacctaattatcctttgtttgtatgtgtattaaatttgacttttcatattttaa-gacaagttag 20945285  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||||||||| |  ||||||||||    
T  20945284 tagtattaattagggttatgtttagg 20945259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 26043042 - 26043164
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||||||||  |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || ||||    
T  26043042 agtgtaattaatatgtctgttttgtgtgttaatgttaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaa-gataa-ttag 26043139  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || |||||||| || |||||||||||    
T  26043140 tagtattaatt-agggtatgtttagg 26043164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 170 - 258
Target Start/End: Complemental strand, 39617333 - 39617245
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    ||||||||||| ||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39617333 agtgtaattaatgtgtctgttttgtatgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaa 39617245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 175 - 295
Target Start/End: Complemental strand, 41740051 - 41739932
Alignment:
Q  175 aattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaata 274  Q
    |||||| |||||| |||||||||||| |||||||||||| |||||||||||||||||| |||||||||| |||||| ||||||| || ||||||| | ||    
T  41740051 aattaatgtgtctattttgtgtgttaatattaccaaattatcctttgtttgtatgtgtgttaaatttgaattttcatatttcaa-gataagttagcagta 41739953  T
Q  275 ttaattaagagtatgtttagg 295  Q
    ||||||||| |||||||||||    
T  41739952 ttaattaagggtatgtttagg 41739932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 170 - 294
Target Start/End: Original strand, 11388144 - 11388269
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||||| ||||| |||||| ||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||| || |||||||    
T  11388144 agtgtaattaatgtgtctattttgcgtgttaatattaccaaattgtattttgtttgtatgtgtattaaatttgacttttcatatttcaa-gataagttag 11388242  T
Q  270 ta--atattaattaagagtatgtttag 294  Q
    ||  |||||||||| | ||||||||||    
T  11388243 tagtatattaattaggggtatgtttag 11388269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 175 - 281
Target Start/End: Original strand, 28477413 - 28477518
Alignment:
Q  175 aattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaata 274  Q
    |||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||| |||| ||||||| ||||| |||||| ||    
T  28477413 aattaatgtgtctgttttgtgtgttaatattaccaaattgtcttttgtttgtatgtgcattaaatttgactattcatatttcaa-gacaaattagtagta 28477511  T
Q  275 ttaatta 281  Q
    |||||||    
T  28477512 ttaatta 28477518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 33287889 - 33288013
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||||||||  ||||| |||||||||||| |||||  |||||||||||||||||| ||||||||||||||||||||| | ||||||| ||||||||||    
T  33287889 agtgtaattaatttgtctattttgtgtgttaatattattaaattgtcctttgtttgtttgtgtattaaatttgactttttatatttcaa-gacaagttag 33287987  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || |||||||||   |||||||||||    
T  33287988 tagtattaattagatgtatgtttagg 33288013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 26121355 - 26121443
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    ||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  26121355 agtgtaattaatgtgtttgttttgtgtgttaatattatcaaattgtcctttgtttgtatgtgtattaaacttgacttttcatatttcaa 26121443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 172 - 295
Target Start/End: Complemental strand, 831441 - 831319
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagta 271  Q
    ||||||||| |||  ||| ||| |||||| ||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||| | |||||| ||    
T  831441 tgtaattaatgtgcatgtattgcgtgttaatattaccaaattgtcctttgtttatatgtgtattaaatttgatttttcatatttcaat-ataagttatta 831343  T
Q  272 atattaattaagagtatgtttagg 295  Q
     ||||||||| |||||||||||||    
T  831342 gtattaattaggagtatgtttagg 831319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 194 - 295
Target Start/End: Original strand, 44338128 - 44338228
Alignment:
Q  194 tgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgttta 293  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||| || ||||||||| ||||||||| | |||||||||    
T  44338128 tgtgttaatattaccaaattgtcctttgtttctatgtgtattaaatttgactttttatatttcaa-gataagttagtactattaattaggggtatgttta 44338226  T
Q  294 gg 295  Q
    ||    
T  44338227 gg 44338228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 182 - 295
Target Start/End: Original strand, 48309479 - 48309591
Alignment:
Q  182 gtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    |||||| |||||| ||||| |||||| ||||| |||||||||||||||||| ||||||||||||||||| ||||||| || ||||||||| |||||||||    
T  48309479 gtgtctattttgtatgttaatattacaaaattatcctttgtttgtatgtgtgttaaatttgacttttcatatttcaa-gataagttagtagtattaatta 48309577  T
Q  282 agagtatgtttagg 295  Q
     | |||||||||||    
T  48309578 ggggtatgtttagg 48309591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 96 - 292
Target Start/End: Original strand, 50092627 - 50092812
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| |||||||||||||||||| ||| | ||||||||||| ||||||||||| ||| |||  ||          |||||||||| ||||  ||||||||    
T  50092627 tactccctccgtcccttaatgtaagcatctattgccttttttacatttcttaacaaaagttgaca----------gtgtaattaatgtgttggttttgtg 50092716  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgttt 292  Q
    | ||| |||||| |||||||||||| ||||||||||||||||| ||| ||||||| ||||||| |||||| |  |||||||||||||| ||||||||    
T  50092717 tattaatattacaaaattgtcctttatttgtatgtgtattaaaattgtcttttcatatttcaa-gacaagatgataatattaattaagggtatgttt 50092812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 176 - 295
Target Start/End: Original strand, 21932955 - 21933073
Alignment:
Q  176 attaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatat 275  Q
    ||||| |||||| |||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||| || ||||||    |||    
T  21932955 attaatgtgtctattttgtgtgttaatattaccaaattatcctttgtttgtatgtgtgttaaatttgacttttcatatttcaa-gataagttaaccgtat 21933053  T
Q  276 taattaagagtatgtttagg 295  Q
    |||||| | |||||||||||    
T  21933054 taattaggggtatgtttagg 21933073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 94 - 255
Target Start/End: Original strand, 29645314 - 29645466
Alignment:
Q  94 attacttcctccgtcccttaatgtaggcacccattgccttttt-cacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgtttt 192  Q
    ||||||||||| ||||||||||||||||| || |||  ||||| ||||||| |||||||||||| | |          |||||||||| || ||||||||    
T  29645314 attacttcctctgtcccttaatgtaggcatccgttgttttttttcacatttattaagaaatgttgtta----------gtgtaattaatgtatctgtttt 29645403  T
Q  193 gtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaattt 255  Q
     ||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||| ||||    
T  29645404 atgtgttaatattacgaaattgtcatttgtttgtatgtgtattaaatttgacttttcatattt 29645466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 96 - 295
Target Start/End: Complemental strand, 43187240 - 43187060
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| ||||||||| ||||||||| ||| |||||||||||||| ||||||||| ||| ||| |||||||||||||           ||||||||||||||    
T  43187240 tactccctccgtccgttaatgtagtcactcattgcctttttcatatttcttaaaaaaagttgtcaatgtaattaat----------gtgtctgttttgtg 43187151  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    | ||| |||||| |||||||||||||||||||||||        ||||||||||| ||||||| |||||| |||| ||||||||| || |||||||||||    
T  43187150 tattaatattacgaaattgtcctttgtttgtatgtg--------ttgacttttcatatttcaa-gacaagatagtgatattaattcagggtatgtttagg 43187060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 170 - 271
Target Start/End: Original strand, 29611857 - 29611957
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||||| |||||||||||| ||||| |||||| || ||||||||||||||||| ||||||||| ||||| ||||||| ||||||||||    
T  29611857 agtgtaattaatgtgtctattttgtgtgttaatattatcaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaa-gacaagttag 29611955  T
Q  270 ta 271  Q
    ||    
T  29611956 ta 29611957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 52325586 - 52325462
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||||| |||| ||||||| ||||| ||||||||||||||||| ||||| ||||| |||| | |||||| ||||||| || |||||||    
T  52325586 agtgtaattaatgtgtctattttatgtgttaatattatcaaattgtcctttgtttatatgtttattacattttatttttcatatttcaa-gataagttag 52325488  T
Q  270 taatattaattaagagtatgtttagg 295  Q
     ||||||||||||| ||||| |||||    
T  52325487 caatattaattaagggtatgattagg 52325462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 189 - 293
Target Start/End: Original strand, 22659622 - 22659725
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtat 288  Q
    |||||||||||| |||||||||||| || |||||||||||||||||||||||| |||||||| |||||||  |||| |||||| |||||||||||  |||    
T  22659622 ttttgtgtgttaatattaccaaattatcttttgtttgtatgtgtattaaatttaacttttcatatttcaa-aacaaattagtagtattaattaaggatat 22659720  T
Q  289 gttta 293  Q
    |||||    
T  22659721 gttta 22659725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 170 - 286
Target Start/End: Complemental strand, 27047261 - 27047146
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| |||||| |||||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| | |||| || ||||| |||     
T  27047261 agtgcaattaatgtgtctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgcattaaatttgactttttatattttaa-gacaatttaa 27047163  T
Q  270 taatattaattaagagt 286  Q
    || ||||||||| ||||    
T  27047162 tagtattaattaggagt 27047146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 170 - 278
Target Start/End: Complemental strand, 41825220 - 41825113
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||||| |||| ||||||| |||||||||||| || ||||||||||||||||| ||||||||| ||||| |||| || ||||||||||    
T  41825220 agtgtaattaatgtgtctattttatgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatattttaa-gacaagttag 41825122  T
Q  270 taatattaa 278  Q
    || ||||||    
T  41825121 tagtattaa 41825113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 42010893 - 42011015
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagta 271  Q
    ||||||||| |||||| |||||||||||| ||||| |||||| | |||||||||||||| | ||||||||||||||||| ||||||| || || |||| |    
T  42010893 tgtaattaatgtgtctattttgtgtgttaatattatcaaattattctttgtttgtatgtatgttaaatttgacttttcatatttcaa-gataaattagca 42010991  T
Q  272 atattaattaagagtatgtttagg 295  Q
     ||||||||| | |||||||||||    
T  42010992 gtattaattatgggtatgtttagg 42011015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 170 - 283
Target Start/End: Complemental strand, 33412056 - 33411946
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| |||||| |||||| |||||||||||| ||||||||||||||  ||| ||||||  ||||||||||||| ||||||| ||||||||| ||||||||    
T  33412056 agtgcaattaatgtgtctattttgtgtgttaatattaccaaattgttttttctttgta--tgtattaaatttgtcttttcatatttcaatg-caagttag 33411960  T
Q  270 taatattaattaag 283  Q
    || |||||||||||    
T  33411959 tagtattaattaag 33411946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 189 - 294
Target Start/End: Original strand, 28229207 - 28229311
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtat 288  Q
    |||| ||| ||| ||||||||||||||||||| ||||||||| ||||||||||||||||| | |||| || |||||||||||| ||||||||| | ||||    
T  28229207 ttttatgtattaatattaccaaattgtcctttatttgtatgtatattaaatttgacttttaatattttaa-gacaagttagtagtattaattatgggtat 28229305  T
Q  289 gtttag 294  Q
    ||||||    
T  28229306 gtttag 28229311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 35765729 - 35765604
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtat---gtgtattaaatttgacttttcaaatttcaatgacaagt 266  Q
    |||||||||||  |||||||||||||| ||| ||||||||||||| |||| |||| |||   ||||||||||||||||||||||||||||||  ||||||    
T  35765729 agtgtaattaatatgtctgttttgtgtattaatattaccaaattgacctt-gtttatatcatgtgtattaaatttgacttttcaaatttcaa-aacaagt 35765632  T
Q  267 tagtaatattaattaagagtatgtttag 294  Q
    ||||| |||||||||   ||||||||||    
T  35765631 tagtagtattaattataggtatgtttag 35765604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 48903166 - 48903042
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| ||||||  ||||| |||||||||||| |||||| |||||||| ||||||||||| | ||||||||||||||||| | ||||||| || || ||||    
T  48903166 agtgcaattaatttgtctattttgtgtgttaatattactaaattgtcatttgtttgtatatatattaaatttgacttttaatatttcaa-gaaaaattag 48903068  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||||||||||| ||| |||||||    
T  48903067 tagtattaattaagggtaggtttagg 48903042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 172 - 248
Target Start/End: Original strand, 25750552 - 25750628
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgactttt 248  Q
    |||||||||  ||||| |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||    
T  25750552 tgtaattaatttgtctattttgtgtgttaatattaccaacttgttctttgtttgtatgtgtattaaatttgactttt 25750628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 26243495 - 26243583
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||||||||||  ||| |||||||||||||| | |||  |||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  26243495 agtgtaattaatatgtttgttttgtgtgttaatgttattaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaa 26243583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 182 - 295
Target Start/End: Original strand, 31474459 - 31474571
Alignment:
Q  182 gtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    |||||||||||||| |||| |||||  ||||| || ||||||||||||||||||||||||   ||||||||||| || ||||| |||||| |||||||||    
T  31474459 gtgtctgttttgtgcgttaatattattaaattatcatttgtttgtatgtgtattaaatttagtttttcaaattttaa-gacaaattagtagtattaatta 31474557  T
Q  282 agagtatgtttagg 295  Q
     | |||||||||||    
T  31474558 ggggtatgtttagg 31474571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 54426027 - 54425954
Alignment:
Q  182 gtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaattt 255  Q
    ||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||| | |||||| ||||    
T  54426027 gtgtctgttttgtgtgttaatattaccaaattgtcatttgtttatatgtgtattaaatttaatttttcatattt 54425954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 37729108 - 37729024
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    ||||||| |||||| |||||||||||| ||||| || ||| || ||||||||||||||||||||||||||||| ||| |||||||    
T  37729108 taattaatgtgtctattttgtgtgttaatattatcatattatcttttgtttgtatgtgtattaaatttgacttctcatatttcaa 37729024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 41543689 - 41543566
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagt 270  Q
    ||||| |||| |||||| ||||||||| || |||||  |||||||| ||| ||||||||||||||||||||||| ||||| ||||||| |||||| ||||    
T  41543689 gtgtatttaatgtgtctattttgtgtgataatattataaaattgtcttttatttgtatgtgtattaaatttgacatttcatatttcaa-gacaagatagt 41543591  T
Q  271 aatattaattaagagtatgtttagg 295  Q
      ||||||||| | |||| ||||||    
T  41543590 tgtattaattaggcgtatatttagg 41543566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 220 - 295
Target Start/End: Complemental strand, 5504608 - 5504534
Alignment:
Q  220 tgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||| | |||||||||||    
T  5504608 tgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaagatagtagtattaattaggggtatgtttagg 5504534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 11140728 - 11140791
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgta 233  Q
    ||||||| ||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  11140728 agtgtaaataatgtgtatgttttgtgtgttagtattaccaaattatcctttgtttgtatgtgta 11140791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 35145280 - 35145378
Alignment:
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| |||||| ||||| |||||||||||||| ||||||||||||||||||||| ||||||| |||||  | ||||||||||||| |  ||||||||||    
T  35145280 tgttaatattacgaaattatcctttgtttgtatttgtattaaatttgacttttcatatttcaa-gacaaaatggtaatattaattagggatatgtttagg 35145378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 96 - 170
Target Start/End: Complemental strand, 5504689 - 5504615
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaa 170  Q
    |||| |||| |||||||||||||||||||| || || |||||||||||||||||||||||| ||| |||||||||    
T  5504689 tactccctcggtcccttaatgtaggcacccgtttcccttttcacatttcttaagaaatgttgtcagtgtaattaa 5504615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 173 - 279
Target Start/End: Original strand, 28243785 - 28243890
Alignment:
Q  173 gtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaa 272  Q
    |||||||| |||| | |||||||||||| ||| | ||||||||||||||||| | |||||||||||||| |||||| | |||||||| | |||||||||     
T  28243785 gtaattaatgtgtttattttgtgtgttaatataatcaaattgtcctttgtttatgtgtgtattaaatttaactttttatatttcaat-ataagttagtag 28243883  T
Q  273 tattaat 279  Q
    |||||||    
T  28243884 tattaat 28243890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 194 - 295
Target Start/End: Original strand, 2421131 - 2421231
Alignment:
Q  194 tgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgttta 293  Q
    ||||||| |||||| |||||||| ||||||||||||| ||||||||||||||||| | | ||||| |||||||||||| ||||| |||   |||||||||    
T  2421131 tgtgttaatattacaaaattgtcatttgtttgtatgtatattaaatttgactttttata-ttcaaagacaagttagtagtattagttagaggtatgttta 2421229  T
Q  294 gg 295  Q
    ||    
T  2421230 gg 2421231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 95 - 255
Target Start/End: Original strand, 26998852 - 26999003
Alignment:
Q  95 ttacttcctccgtccctt-aatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttg 193  Q
    ||||| |||||||||||| |||||||| | |||||  |||||||||||||||||||||| ||| ||| | ||||||| ||||         ||| |||||    
T  26998852 ttactccctccgtccctttaatgtaggtatccattatctttttcacatttcttaagaaaagttgtcattataattaa-tgta---------tctattttg 26998941  T
Q  194 tgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaattt 255  Q
    | ||||| |||||| |||||||| |||||||||| ||||||||||||||| |||||| ||||    
T  26998942 tttgttaatattacgaaattgtcttttgtttgtacgtgtattaaatttgatttttcatattt 26999003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 197 - 294
Target Start/End: Original strand, 31826242 - 31826338
Alignment:
Q  197 gttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttag 294  Q
    |||| ||||| | |||||| ||||||||||||||||||||||||||| |||  | ||| ||| |||||||||||||||||||||||  ||||||||||    
T  31826242 gttaatattatctaattgttctttgtttgtatgtgtattaaatttgattttgtatattgcaa-gacaagttagtaatattaattaatggtatgtttag 31826338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 48901600 - 48901476
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| ||||||  ||||| |||||||||||| |||||| |||||||| ||||||||||| | ||||||||||||||||| | |||| || || || |||     
T  48901600 agtgcaattaatttgtctattttgtgtgttaatattactaaattgtcatttgtttgtatatatattaaatttgacttttaatattttaa-gaaaaattaa 48901502  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||||||||||| ||| |||||||    
T  48901501 tagtattaattaagggtaggtttagg 48901476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 11344582 - 11344669
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaat 259  Q
    |||||||||| |||||| ||||||||||||  ||||||||||| | |||| |||||||||||||||||||||| |||| | ||||||||    
T  11344582 gtgtaattaatgtgtctattttgtgtgttaacattaccaaattattcttt-tttgtatgtgtattaaatttgattttttatatttcaat 11344669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 28228222 - 28228325
Alignment:
Q  190 tttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatg 289  Q
    ||||||||||  ||||| ||||  ||| |||||||||||||||||||||| ||||||||||  |||||| ||||| |||||| ||||||||| ||||||     
T  28228222 tttgtgtgttcatattatcaaaacgtcatttgtttgtatgtgtattaaatgtgacttttcatttttcaa-gacaaattagtagtattaattatgagtata 28228320  T
Q  290 tttag 294  Q
    |||||    
T  28228321 tttag 28228325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 31531508 - 31531448
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgt 230  Q
    ||||||||||| ||||||||||||||||||  ||||| ||||||||| |||||||||||||    
T  31531508 agtgtaattaatgtgtctgttttgtgtgttgatattatcaaattgtcttttgtttgtatgt 31531448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 31531149 - 31531087
Alignment:
Q  232 tattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    |||||||||| |||||||||||||||| |||||||||||| ||||||||| | |||||||||||    
T  31531149 tattaaatttaacttttcaaatttcaa-gacaagttagtagtattaattaggggtatgtttagg 31531087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 29349401 - 29349511
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtat---taccaaattgtcctttgtttgta-tgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||| |||||||||||||| |||| |||   |||||||||||  |||| ||||| | ||||| ||||||||||||||| ||||||| || |||||||    
T  29349401 taattaacgtgtctgttttgtgcgttaatattactaccaaattgttatttgattgtactatgtataaaatttgacttttcatatttcaa-gataagttag 29349499  T
Q  270 taatattaatta 281  Q
    || |||||||||    
T  29349500 tagtattaatta 29349511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 21864333 - 21864408
Alignment:
Q  182 gtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||||| |||| |||| || ||||||||||||||| ||| ||||||||| |||||||||||| |||||| |||||||    
T  21864333 gtgtctattttatgtgctaatattaccaaattgtctttt-tttgtatgtatattaaatttgaattttcatatttcaa 21864408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 172 - 294
Target Start/End: Complemental strand, 34055943 - 34055824
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagta 271  Q
    |||||||||  |||||||||||||||||| |||||  |||||||| ||  ||| ||||| |||||| |||||||||||  ||||||| || ||| || |     
T  34055943 tgtaattaatatgtctgttttgtgtgttaatattatgaaattgtcatt--tttttatgtatattaactttgacttttcgtatttcaa-gataagataatg 34055847  T
Q  272 atattaattaagagtatgtttag 294  Q
    |||||||||| | ||||||||||    
T  34055846 atattaattatgggtatgtttag 34055824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 39931910 - 39932004
Alignment:
Q  176 attaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagta 271  Q
    ||||| |||| | ||||||||||||   |||  |||||||| |||||||||||||||||||||||| | |||||| |||| || ||||||||||||    
T  39931910 attaatgtgtatattttgtgtgttaaggttattaaattgtcatttgtttgtatgtgtattaaattttagttttcatattttaa-gacaagttagta 39932004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 48581343 - 48581465
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagta 271  Q
    |||| |||| |||| | |||||||| ||| ||||| |||| | |||||| ||| |||||||||||||||||| |||||| ||||| | ||||||||| ||    
T  48581343 tgtagttaatgtgtttattttgtgtattaatattaacaaactatcctttatttttatgtgtattaaatttgatttttcatatttcca-gacaagttaata 48581441  T
Q  272 atattaattaagagtatgtttagg 295  Q
     || ||||||   |||||||||||    
T  48581442 gtactaattagaggtatgtttagg 48581465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 175 - 294
Target Start/End: Original strand, 49000480 - 49000597
Alignment:
Q  175 aattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaata 274  Q
    |||||| |||||| ||||||||  || ||||| |||| |||||| ||||| |||||||||||||||| | |||| | |||| || || |||||| || ||    
T  49000480 aattaatgtgtctattttgtgtaata-tattatcaaagtgtcctctgtttttatgtgtattaaatttaattttttatattttaa-gataagttaatagta 49000577  T
Q  275 ttaattaagagtatgtttag 294  Q
    |||||||||||| |||||||    
T  49000578 ttaattaagagtgtgtttag 49000597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 284
Target Start/End: Original strand, 383649 - 383742
Alignment:
Q  190 tttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaaga 284  Q
    ||||||||| | | |||| ||||| || ||||||| |||||||||| ||||| |||||||| |||  ||| ||||||||||| ||||||||||||    
T  383649 tttgtgtgtgaattttactaaattatcatttgtttatatgtgtatttaatttaacttttcacattctaat-acaagttagtagtattaattaaga 383742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 365
Target Start/End: Original strand, 26999214 - 26999264
Alignment:
Q  315 taatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatg 365  Q
    |||||||||||||| ||||||||  |||| |||||||||||||||||||||    
T  26999214 taatttaaaaaggggtttacatttgaggacaaaaataaaatcaaatggatg 26999264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 312 - 365
Target Start/End: Complemental strand, 33987110 - 33987058
Alignment:
Q  312 ttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatg 365  Q
    |||||||||||||| || |||||||| ||||| |||||||||||||||||||||    
T  33987110 ttgtaatttaaaaaagg-tttacatttaaggacaaaaataaaatcaaatggatg 33987058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 230 - 295
Target Start/End: Original strand, 11396804 - 11396870
Alignment:
Q  230 tgtattaaatttgacttttcaaatttcaatgacaagttagta--atattaattaagagtatgtttagg 295  Q
    ||||||||||||||||||||| ||||||| || |||||||||  |||||||||| | |||||||||||    
T  11396804 tgtattaaatttgacttttcatatttcaa-gataagttagtagtatattaattaggtgtatgtttagg 11396870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 12077682 - 12077630
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatg 361  Q
    |||| ||||||| ||||||| |||||||| ||||| |||||||||||||||||    
T  12077682 atctagtaatttgaaaaggggtttacatttaaggacaaaaataaaatcaaatg 12077630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 44647831 - 44647879
Alignment:
Q  202 tattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttca 250  Q
    |||||| |||||||| ||||||| |||||||||| ||||||||||||||    
T  44647831 tattactaaattgtcatttgtttatatgtgtatttaatttgacttttca 44647879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 152
Target Start/End: Original strand, 35145220 - 35145255
Alignment:
Q  117 taggcacccattgcctttttcacatttcttaagaaa 152  Q
    |||||||||| |||||||||||||||||||||||||    
T  35145220 taggcacccagtgcctttttcacatttcttaagaaa 35145255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 54556007 - 54555897
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||||||||  ||||| |||| | ||||| | |||||||||| || ||||||| ||||| |||||| ||| |||||||| | || || ||||| ||||    
T  54556007 agtgtaattaatatgtctattttatatgttaattttaccaaattatcatttgtttatatgtatattaattttaacttttcatactttaa-gacaaattag 54555909  T
Q  270 taatattaatta 281  Q
    || |||||||||    
T  54555908 tagtattaatta 54555897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 11676133 - 11676084
Alignment:
Q  312 ttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    |||||||||||||| || |||||||| ||||| ||||||||||||||||||    
T  11676133 ttgtaatttaaaaaagg-tttacatttaaggacaaaaataaaatcaaatgg 11676084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 30464959 - 30464910
Alignment:
Q  312 ttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    |||||||||||||| || |||||||| ||||| ||||||||||||||||||    
T  30464959 ttgtaatttaaaaaagg-tttacatttaaggacaaaaataaaatcaaatgg 30464910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 306 - 364
Target Start/End: Complemental strand, 33411920 - 33411862
Alignment:
Q  306 tgtatcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggat 364  Q
    |||||||  |||||| |||| | ||||||||| ||| ||||||||||||||||||||||    
T  33411920 tgtatctaataatttgaaaatgaatttacatttaagaataaaaataaaatcaaatggat 33411862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 33635113 - 33635162
Alignment:
Q  312 ttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    |||||||||||||| || |||||||| ||||| ||||||||||||||||||    
T  33635113 ttgtaatttaaaaaagg-tttacatttaaggacaaaaataaaatcaaatgg 33635162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 37599759 - 37599710
Alignment:
Q  312 ttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    |||||||||||||| || |||||||| ||||| ||||||||||||||||||    
T  37599759 ttgtaatttaaaaaagg-tttacatttaaggacaaaaataaaatcaaatgg 37599710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 46202341 - 46202288
Alignment:
Q  227 atgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    |||||||||||||||||||||| ||||||||| || || |||||| |||||||||    
T  46202341 atgtgtattaaatttgactttttaaatttcaa-gataaattagtagtattaatta 46202288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 53717653 - 53717599
Alignment:
Q  116 gtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaa 170  Q
    ||||||| |||||  |||||| |||||||||||||||| || |||||||||||||    
T  53717653 gtaggcatccattatcttttttacatttcttaagaaatattgtcaatgtaattaa 53717599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 11393945 - 11394005
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgt 230  Q
    ||||||||||| |||||| |||||||||||| || || ||||||||| ||| ||| |||||    
T  11393945 agtgtaattaatgtgtctattttgtgtgttaatactatcaaattgtcatttatttatatgt 11394005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 13084301 - 13084245
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatg 365  Q
    |||| ||||||| ||||||  ||||| || |||||||||||||||||||| ||||||    
T  13084301 atctagtaatttgaaaaggagtttacgtttaaggataaaaataaaatcaattggatg 13084245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 314 - 362
Target Start/End: Complemental strand, 14645825 - 14645777
Alignment:
Q  314 gtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    ||||||||||||||| |||||||| ||| | ||||||||| ||||||||    
T  14645825 gtaatttaaaaaggggtttacatttaagaacaaaaataaagtcaaatgg 14645777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 28477336 - 28477392
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaa 152  Q
    ||||||||||||||||  ||||| || ||| || | |||||||||||||||||||||    
T  28477336 tacttcctccgtccctatatgtaagcccccttttcttttttcacatttcttaagaaa 28477392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 31650743 - 31650683
Alignment:
Q  175 aattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtatt 235  Q
    |||||| |||||| |||| |||| || ||||||||||||||| ||| ||||||||| ||||    
T  31650743 aattaatgtgtctattttatgtggtaatattaccaaattgtcatttatttgtatgtatatt 31650683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 48213653 - 48213721
Alignment:
Q  175 aattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttga 243  Q
    |||||| |||| | |||||||||||| |||||||  ||| || ||| |||||||||||||||| |||||    
T  48213653 aattaatgtgtttattttgtgtgttaatattaccttattatcatttatttgtatgtgtattaattttga 48213721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 1e-49; HSPs: 92)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 96 - 295
Target Start/End: Complemental strand, 8065217 - 8065029
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| ||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||| |||          |||||||||| ||||||||||||||    
T  8065217 tactccctccgtcccttaatgtaggctcccattgcccttttcacatttcctaagaaatgttgtca----------gtgtaattaatgtgtctgttttgtg 8065128  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| |||||||||||| ||||||||||||||||||||||| ||||| |||||| ||||||| |||||||||||| ||||||||| | |||||||||||    
T  8065127 tgttaatattaccaaattatcctttgtttgtatgtgtattaactttgatttttcatatttcaa-gacaagttagtagtattaattaggggtatgtttagg 8065029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 95 - 295
Target Start/End: Complemental strand, 9718318 - 9718129
Alignment:
Q  95 ttacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgt 194  Q
    ||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||||||||| |||          |||||||||| |||||||||||||    
T  9718318 ttactccctccgtcccttaatgtagccatccattgcatttttcacatttcttaagaaatgttgtca----------gtgtaattaatgtgtctgttttgt 9718229  T
Q  195 gtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttag 294  Q
    |||||| |||||||||||| | |||||||||||||||||||||||||| ||| ||  ||||||| |||||||||||| ||||||||||| ||||||||||    
T  9718228 gtgttaatattaccaaattattctttgtttgtatgtgtattaaatttgtcttatcgtatttcaa-gacaagttagtagtattaattaagggtatgtttag 9718130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 96 - 295
Target Start/End: Original strand, 44424555 - 44424743
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||| | |          |||||||||| |||||||||||||     
T  44424555 tactccctccgtcccttaatgtaggcactcattgcatttttcacatttcttaagaaaagttgtta----------gtgtaattaatgtgtctgttttgta 44424644  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||| | |||||||||||    
T  44424645 tgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaagatagtagtattaattaggggtatgtttagg 44424743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 102 - 295
Target Start/End: Original strand, 41665677 - 41665858
Alignment:
Q  102 ctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttag 201  Q
    |||||||||||||||||||||| |||||  ||||||||||||||||||||||||| |||          |||||||||| |||||||||||||||||||     
T  41665677 ctccgtcccttaatgtaggcactcattgt-tttttcacatttcttaagaaatgttgtca----------gtgtaattaatgtgtctgttttgtgtgttaa 41665765  T
Q  202 tattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    || || |||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||| || ||||||||| | |||||||||||    
T  41665766 tagtatcaaattgtcctttgtttgtatgtgtattaaatttaacttttcatatttcaa-gacaagttaatagtattaattaggggtatgtttagg 41665858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 11459178 - 11459301
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagt 270  Q
    |||||| ||| ||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||    
T  11459178 gtgtaaataatgtgtctgttttgtgtgttaatattactaaattgtcctttgtttgtatatgtattaaatttgatttttcaaatttcaa-gacaagttagt 11459276  T
Q  271 aatattaattaagagtatgtttagg 295  Q
    | |||||||||||||||||||||||    
T  11459277 agtattaattaagagtatgtttagg 11459301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 96 - 365
Target Start/End: Original strand, 3237681 - 3237937
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| |||||||||||||||||||| ||| |||  ||||||||||||| |||||||| ||       || ||||| ||||||||| ||||||||||||||    
T  3237681 tactccctccgtcccttaatgtaggtacctattatctttttcacattttttaagaaaagt-------gttattaa-tgtaattaatgtgtctgttttgtg 3237772  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| |||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||| |  ||||||||      
T  3237773 tgttaatattacaaaattatcctttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaagatagtagtattaattagggatatgttta-- 3237869  T
Q  296 nnnnnnnnnntgtatcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatg 365  Q
              || |||| ||||||||||||||  |||||||| | ||| |||||||||||||||||||||    
T  3237870 --aaaaaaaatgcatctagtaatttaaaaaggagtttacatttagggacaaaaataaaatcaaatggatg 3237937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 14420701 - 14420824
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||| |||| ||||     
T  14420701 agtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcctttgtttgcatgtgtatt-aatttaacttttcaaatttcaa-gacatgttat 14420798  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||||||||| |||||||||||||    
T  14420799 tagtattaattaggagtatgtttagg 14420824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 27297601 - 27297725
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||| |||    
T  27297601 agtgtaattaatgtgtctgttttgtgtgttaatattacaaaattatcctttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaagatag 27297699  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||||||||| |  ||||||||||    
T  27297700 tagtattaattagggatatgtttagg 27297725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 375425 - 375302
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagt 270  Q
    |||||||||| |||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||| ||||||| |||||||||||    
T  375425 gtgtaattaatgtgtctattttgtgtgttagtattatcaaattgtcatttgtttgtatgtgtattaaatttgatttttcatatttcaa-gacaagttagt 375327  T
Q  271 aatattaattaagagtatgtttagg 295  Q
    | |||| |||| || ||||||||||    
T  375326 agtattgattacgaatatgtttagg 375302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 92 - 295
Target Start/End: Original strand, 15851487 - 15851679
Alignment:
Q  92 taattacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttt 191  Q
    |||||||| |||| |||||||||||||| || | |||| |||||||||||||||||||||| ||| | |          |||||||||| ||||||||||    
T  15851487 taattactccctctgtcccttaatgtagacatctattgtctttttcacatttcttaagaaaagttgtga----------gtgtaattaatgtgtctgttt 15851576  T
Q  192 tgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtt 291  Q
    | ||||||| |||||  |||||||||||||||| |||||||||||||||||| |||||| ||||||| |||||  ||||| ||||||||| | |||||||    
T  15851577 tttgtgttaatattatgaaattgtcctttgtttatatgtgtattaaatttgaattttcatatttcaa-gacaaaatagtagtattaattaggggtatgtt 15851675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 37355061 - 37355184
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagt 270  Q
    |||||||||| |||||| |||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| ||      
T  37355061 gtgtaattaatgtgtctcttttgtgtgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaagataaa 37355159  T
Q  271 aatattaattaagagtatgtttagg 295  Q
    | ||||||||||| |||||||||||    
T  37355160 agtattaattaagggtatgtttagg 37355184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 95 - 295
Target Start/End: Complemental strand, 17251107 - 17250918
Alignment:
Q  95 ttacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgt 194  Q
    ||||| |||||||| ||||||||||| | | |||| ||||||||||||| |||||||| |||           | ||| ||||||| |||||||||||||    
T  17251107 ttactccctccgtctcttaatgtaggtatctattgtctttttcacattttttaagaaaagtt----------gttagtataattaatgtgtctgttttgt 17251018  T
Q  195 gtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttag 294  Q
    |||||| |||||| |||||||| |||||||||||||||||| || ||||||||||| ||||||| |||||| ||||| ||||||||||  ||||||||||    
T  17251017 gtgttaatattacaaaattgtcatttgtttgtatgtgtatttaaattgacttttcatatttcaa-gacaagatagtagtattaattaaaggtatgtttag 17250919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 170 - 271
Target Start/End: Original strand, 24774889 - 24774989
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| || ||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  24774889 agtgtaattaatgtatctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaagttag 24774987  T
Q  270 ta 271  Q
    ||    
T  24774988 ta 24774989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 7255626 - 7255749
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagt 270  Q
    |||||||||| ||||||||||||||| ||| |||||||||||| ||||||| |||| ||||||||||||||||||||||| ||||||| ||||| |||||    
T  7255626 gtgtaattaatgtgtctgttttgtgtattaatattaccaaattatcctttgattgtttgtgtattaaatttgacttttcatatttcaa-gacaaattagt 7255724  T
Q  271 aatattaattaagagtatgtttagg 295  Q
    | ||||||||| |  ||||||||||    
T  7255725 agtattaattagggatatgtttagg 7255749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 247684 - 247808
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||||| |||||||||||| |||||  |||||| ||||||||||||||| ||||||||||||||||||| || |||| ||||||||||    
T  247684 agtgtaattaatgtgtctattttgtgtgttaatattataaaattgccctttgtttgtatgtatattaaatttgacttttcatatctcaa-gacaagttag 247782  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || |||| |||||| |||||| ||||    
T  247783 tagtattgattaagggtatgtgtagg 247808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 132 - 290
Target Start/End: Complemental strand, 38982188 - 38982031
Alignment:
Q  132 tttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtg 231  Q
    ||||| ||||||||||||||| ||| ||  ||||||||| |||| |||| || |||||||||||||||| |||||||||||| |  ||||||||||||||    
T  38982188 ttttttacatttcttaagaaaagttgtctgtgtaattaa-tgta-ttaatgtatctgttttgtgtgttaatattaccaaattattttttgtttgtatgtg 38982091  T
Q  232 tattaaatttgacttttcaaatttcaatgacaa--gttagtaatattaattaagagtatgt 290  Q
    ||||||||||||||||||| ||||||| |||||  ||||||| ||||||||| | ||||||    
T  38982090 tattaaatttgacttttcatatttcaa-gacaattgttagtagtattaattaggggtatgt 38982031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 107 - 282
Target Start/End: Complemental strand, 35178927 - 35178763
Alignment:
Q  107 tcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttagtatta 206  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| ||| |||          ||||| |||| |||| ||||||||||| || |||||    
T  35178927 tcccttaatgtaggcacccattgtttttttcacatttcttaagaaaagttgtca----------gtgtagttaatgtgtatgttttgtgtgataatatta 35178838  T
Q  207 ccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaa 282  Q
    | |||||||| ||| ||||||| ||||||||||||||||||||| ||||||| | |||| ||||| ||||||||||    
T  35178837 cgaaattgtcttttatttgtatttgtattaaatttgacttttcatatttcaa-ggcaagatagtagtattaattaa 35178763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 28265032 - 28264911
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||| ||||||||| |||| ||||||||||||||| ||||||||||||| |||||||||||||| |||| ||||||| |||||||       
T  28265032 agtgtaattaatgtgtttgttttgtgcgttaatattaccaaattgtcatttgtttgtatgtatattaaatttgactattcatatttcaa-gacaagt--- 28264937  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    |||||||||||| | |||||||||||    
T  28264936 taatattaattaggggtatgtttagg 28264911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 43650058 - 43650168
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||||||||||||| ||||| |||||| ||||||| |||||||||||||||||||||||||||| ||| |||||||||  |||||||||    
T  43650058 agtgtaattaatgtgtctgttttgtatgttaatattactaaattgttctttgtttgtatgtgtattaaatttgaccttttaaatttcaa-aacaagttag 43650156  T
Q  270 taatattaatta 281  Q
    |  |||||||||    
T  43650157 ttgtattaatta 43650168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 170 - 293
Target Start/End: Original strand, 45214749 - 45214871
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||||||||||||||||||| ||||  ||||||| |||||||||||||||||||||||||| |||||||| |||| || || || ||||    
T  45214749 agtgtaattaatgtgtctgttttgtgtgttaatattttcaaattgccctttgtttgtatgtgtattaaatttaacttttcatattttaa-gataaattag 45214847  T
Q  270 taatattaattaagagtatgttta 293  Q
    || ||||||||| | |||||||||    
T  45214848 tagtattaattaggggtatgttta 45214871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 95 - 295
Target Start/End: Original strand, 28733784 - 28733971
Alignment:
Q  95 ttacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgt 194  Q
    ||||| ||| ||||||||||||||||||||||||  ||||||||||||| ||||||||  || ||           |||||||||| ||||||||||| |    
T  28733784 ttactcccttcgtcccttaatgtaggcacccattttctttttcacattttttaagaaaaattgtcg----------gtgtaattaatgtgtctgttttat 28733873  T
Q  195 gtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttag 294  Q
    ||  || ||||||||||||||| ||||||||||||||||| ||||||||||||| | ||||||| || || |||||| ||||||||| | ||||||||||    
T  28733874 gt--taatattaccaaattgtcatttgtttgtatgtgtataaaatttgactttttatatttcaa-gataaattagtagtattaattaggggtatgtttag 28733970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 17663648 - 17663772
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||| || |||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||   ||||||| ||||| ||||    
T  17663648 agtgtaattaatgtgcctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgactttttgtatttcaa-gacaaattag 17663746  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    ||  |||||||| | |||||||||||    
T  17663747 taggattaattaggggtatgtttagg 17663772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 103 - 295
Target Start/End: Complemental strand, 31644580 - 31644399
Alignment:
Q  103 tccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttagt 202  Q
    ||||||| |||||||||||| |||||| |||||||||||||  ||||||| ||| |||          || ||||||| ||||||||||| ||||||| |    
T  31644580 tccgtcctttaatgtaggcatccattgtctttttcacattttataagaaaagttatca----------gtttaattaatgtgtctgttttttgtgttaat 31644491  T
Q  203 attaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| |||||||| |||||||||||||||||||||||||| |||||| | ||||| || ||  ||||| ||||||||| | |||||||||||    
T  31644490 attacaaaattgtcatttgtttgtatgtgtattaaatttgatttttcataattcaa-gataaaatagtagtattaattaggggtatgtttagg 31644399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 186 - 279
Target Start/End: Original strand, 34330042 - 34330134
Alignment:
Q  186 ctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaat 279  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||| ||||| |||||||    
T  34330042 ctgttttgtgtgttaatattacaaaattgtcctttgtttgtatgtgtattaaatttaacttttcatatttcaa-gacaagatagtagtattaat 34330134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 174 - 295
Target Start/End: Original strand, 41865744 - 41865863
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaat 273  Q
    ||||||| |||||| ||||||||||||  ||||||||||| ||||| |||||||||||||||||||||||||||| | |||| || ||||||||||||||    
T  41865744 taattaatgtgtctattttgtgtgttaacattaccaaattatcctt-gtttgtatgtgtattaaatttgactttttatattttaa-gacaagttagtaat 41865841  T
Q  274 attaattaagagtatgtttagg 295  Q
    ||| |||| | |||||||||||    
T  41865842 atttattaggggtatgtttagg 41865863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 170 - 293
Target Start/End: Original strand, 2131781 - 2131903
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| ||||||  ||||| |||||||||||| |||||||||||| || ||||||||||| ||||||||||||||||||||| |||| || ||||||||||    
T  2131781 agtgcaattaacatgtctattttgtgtgttaatattaccaaattatcttttgtttgtatctgtattaaatttgacttttcatattt-aaagacaagttag 2131879  T
Q  270 taatattaattaagagtatgttta 293  Q
    |  ||||||||| | |||||||||    
T  2131880 ttgtattaattaggggtatgttta 2131903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 172 - 295
Target Start/End: Complemental strand, 38449793 - 38449671
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagta 271  Q
    ||||||||| ||||||||||||||| ||| ||||| |||||| || |||||||||||||||||||||||||| | |||| ||||||| |||| || | ||    
T  38449793 tgtaattaatgtgtctgttttgtgtattaatattatcaaattatcatttgtttgtatgtgtattaaatttgattattcatatttcaa-gacaggtcaata 38449695  T
Q  272 atattaattaagagtatgtttagg 295  Q
    |||||||||| | |||||||||||    
T  38449694 atattaattaggggtatgtttagg 38449671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 11071692 - 11071815
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| |||||| ||||||  ||| ||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||  |  ||||||    
T  11071692 agtgcaattaatgtgtctaatttatgtgttaatattactaaattgtcctttgcttgtatgtgtattaaatttgacttttcatatttcaa--aacagttag 11071789  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    |||||||||||| | | |||||||||    
T  11071790 taatattaattaggggcatgtttagg 11071815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 101 - 295
Target Start/End: Original strand, 13534380 - 13534553
Alignment:
Q  101 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgtta 200  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||          ||||||||||| |||| ||||||||||||||    
T  13534380 cctccgtcccttaatgtaggcacctattgcc-ttttcacatttcttaagaaatgttgtc----------agtgtaattaatgtgtttgttttgtgtgtta 13534468  T
Q  201 gtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
     |       |||| ||||| |||||||  ||||||||||||||||||||| ||||||| |||||||||||| ||||||||| |  ||||||||||    
T  13534469 at-------aattatccttggtttgta--tgtattaaatttgacttttcatatttcaa-gacaagttagtagtattaattagggatatgtttagg 13534553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 189 - 295
Target Start/End: Complemental strand, 40346143 - 40346038
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtat 288  Q
    |||||||||||| |||||| |||||||| ||| ||||||||||||||||||||||||||||| ||||||| | |||||| ||| ||||||||| | ||||    
T  40346143 ttttgtgtgttaatattactaaattgtcttttatttgtatgtgtattaaatttgacttttcatatttcaa-ggcaagtttgtagtattaattaggggtat 40346045  T
Q  289 gtttagg 295  Q
    |||||||    
T  40346044 gtttagg 40346038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 174 - 294
Target Start/End: Complemental strand, 1246490 - 1246370
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgac-ttttcaaatttcaatgacaagttagtaa 272  Q
    ||||||| |||| |||||||||||||| |||||  ||||||| |||||||||||||||||||||||||||| |||||| ||||||| |||||| || ||     
T  1246490 taattaacgtgtttgttttgtgtgttaatattatgaaattgttctttgtttgtatgtgtattaaatttgactttttcatatttcaa-gacaagataatag 1246392  T
Q  273 tattaattaagagtatgtttag 294  Q
    ||||||||| | ||||||||||    
T  1246391 tattaattaggggtatgtttag 1246370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 23464711 - 23464817
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaat 273  Q
    ||||||| |||||| ||||||| || | ||||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||  ||||||||||| |    
T  23464711 taattaatgtgtctattttgtgcgtaaatattatcaaattgtcctttatttgtatatgtattaaatttgacttttcatatttcaa-aacaagttagtagt 23464809  T
Q  274 attaatta 281  Q
    ||||||||    
T  23464810 attaatta 23464817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 174 - 295
Target Start/End: Original strand, 4758054 - 4758174
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaat 273  Q
    ||||||| |||| | |||||||||||| |||||  |||||||||||||||| |||||||||||||||||||||| || |||| || || || |||||| |    
T  4758054 taattaatgtgtttattttgtgtgttaatattatgaaattgtcctttgtttttatgtgtattaaatttgactttacatattttaa-gaaaaattagtagt 4758152  T
Q  274 attaattaagagtatgtttagg 295  Q
    |||||||| || ||||||||||    
T  4758153 attaattaggaatatgtttagg 4758174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 20362007 - 20362130
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||| |||| |||||| |||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||   ||||||| ||||| ||||    
T  20362007 agtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttgtttgtatgtgta-taaatttgactttttgtatttcaa-gacaaattag 20362104  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    ||  |||||||| | |||||||||||    
T  20362105 taggattaattaggggtatgtttagg 20362130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 21012877 - 21013001
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| |||||| |||| | |||||||||||| ||||| |||||| |||||||||||||||  ||||||||||||||||| | |||||||  |||||||||    
T  21012877 agtgcaattaatgtgtttattttgtgtgttaatattatcaaattatcctttgtttgtatgcatattaaatttgactttttatatttcaa-aacaagttag 21012975  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||| ||||| |||||| ||||||    
T  21012976 tagtataaattaggagtatatttagg 21013001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 190 - 295
Target Start/End: Complemental strand, 25731247 - 25731143
Alignment:
Q  190 tttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatg 289  Q
    ||||||||||| ||||| |||||| || ||||||||||||| |||||||||||| |||||| |||| || |||||||||||| ||||||||| | |||||    
T  25731247 tttgtgtgttaatattatcaaattatcttttgtttgtatgtatattaaatttgatttttcatattttaa-gacaagttagtagtattaattaggggtatg 25731149  T
Q  290 tttagg 295  Q
    ||||||    
T  25731148 tttagg 25731143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 170 - 271
Target Start/End: Original strand, 44421473 - 44421573
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| || |||||||||| ||||| |||||| |||||||| |||||||||||||||||||||||||  |||| |||||| || ||||||||||    
T  44421473 agtgtaattaatgtatctgttttgtttgttaatattactaaattgtcatttgtttgtatgtgtattaaatttgtttttttaaattttaa-gacaagttag 44421571  T
Q  270 ta 271  Q
    ||    
T  44421572 ta 44421573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 177 - 362
Target Start/End: Original strand, 3645354 - 3645538
Alignment:
Q  177 ttaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatatt 276  Q
    |||| |||||| |||||||| ||| |||||| ||||||||||| |||||| ||| ||||||||||||||||||| ||||||| | |||||||||| ||||    
T  3645354 ttaatgtgtctattttgtgtattaatattactaaattgtccttcgtttgtgtgtatattaaatttgacttttcatatttcaagg-caagttagtagtatt 3645452  T
Q  277 aattaagagtatgtttaggnnnnnnnnnn-tgtatcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    ||||| | ||||||||| |           |||||||  |||||| |||||||| ||||||| | ||||||||| ||||||||||||    
T  3645453 aattagg-gtatgtttatgaagaaaaaaaatgtatctaataatttgaaaagggacttacatttagggataaaaagaaaatcaaatgg 3645538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 26512099 - 26512183
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    ||||||| |||| | |||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||| | |||||||    
T  26512099 taattaatgtgtttattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgactttttatatttcaa 26512183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 3326749 - 3326871
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagt 270  Q
    |||||||||| ||||||||||||| | ||| |||||  |||||||||||||||| ||||||||| |||||| |||||||| ||||||| || ||  ||||    
T  3326749 gtgtaattaatgtgtctgttttgtatattaatattattaaattgtcctttgtttatatgtgtataaaatttaacttttcatatttcaa-gataacgtagt 3326847  T
Q  271 aatattaattaagagtatgtttag 294  Q
    | ||||||||| | ||||||||||    
T  3326848 agtattaattaggggtatgtttag 3326871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 170 - 293
Target Start/End: Complemental strand, 7278694 - 7278572
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||||||||  ||| |||||||||||    ||||| ||||||| |||||||||||||||||||||||||||||| || | ||||||| || |||||||    
T  7278694 agtgtaattaatatgtttgttttgtgtgaatatattatcaaattgccctttgtttgtatgtgtattaaatttgactattaatatttcaa-gataagttag 7278596  T
Q  270 taatattaattaagagtatgttta 293  Q
    || ||||||||| | |||||||||    
T  7278595 tagtattaattaggggtatgttta 7278572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 171 - 282
Target Start/End: Complemental strand, 35241788 - 35241678
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagt 270  Q
    |||||||||| ||||||||||||| ||||| ||||| |||||| || |||||||||||| ||| |||||||||||||| | | ||||| || |||| |||    
T  35241788 gtgtaattaatgtgtctgttttgtttgttaatattatcaaattatcatttgtttgtatgcgtaataaatttgactttttatacttcaa-gataagtcagt 35241690  T
Q  271 aatattaattaa 282  Q
    ||||||||||||    
T  35241689 aatattaattaa 35241678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 2521382 - 2521257
Alignment:
Q  169 aagtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagtta 268  Q
    ||||||| |||| |||||| |||| |||| || |||||  |||||||| |||||||||||||||||||||||||||||||   ||||||| ||||| |||    
T  2521382 aagtgtagttaatgtgtctattttatgtggtaatattattaaattgtcttttgtttgtatgtgtattaaatttgactttttgtatttcaa-gacaaatta 2521284  T
Q  269 gtaatattaattaagagtatgtttagg 295  Q
    |||  |||||||| | |||||||||||    
T  2521283 gtaggattaattaggggtatgtttagg 2521257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 45150798 - 45150732
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaattt 255  Q
    |||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  45150798 ttttgtgtgttaatattactcaattgtcctttgtttgtatgtgtattaaatttgacttttcatattt 45150732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 173 - 258
Target Start/End: Original strand, 14527650 - 14527735
Alignment:
Q  173 gtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||||||| |||||| |||||||||||| ||||||| |||| || ||||||||||||| |||||||||||| |||||| |||||||    
T  14527650 gtaattaatgtgtctattttgtgtgttaatattaccgaattatcatttgtttgtatgtatattaaatttgatttttcatatttcaa 14527735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 170 - 291
Target Start/End: Original strand, 43709943 - 43710063
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| |||||| | |||| |||||||||||| ||||||  ||||||||||||||| ||||||||||||| || |||||| | ||||||| || |||||||    
T  43709943 agtgcaattaatgcgtctattttgtgtgttaatattacttaattgtcctttgtttatatgtgtattaaaatttactttttatatttcaa-gataagttag 43710041  T
Q  270 taatattaattaagagtatgtt 291  Q
    || ||||||||| | |||||||    
T  43710042 tagtattaattatgggtatgtt 43710063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 4033605 - 4033676
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaattt 241  Q
    ||||||||||| || |||||||| ||||||| |||||| ||||||| |||||||||||||||||||||||||    
T  4033605 agtgtaattaatgtttctgttttctgtgttaatattactaaattgttctttgtttgtatgtgtattaaattt 4033676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 6275648 - 6275524
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgact-tttcaaatttcaatgacaagtta 268  Q
    |||| |||||| |||||| ||||||||||||  ||||  |||||||| ||||||||||| |||||||||||| ||| ||||| ||||||| |||||||||    
T  6275648 agtgcaattaatgtgtctattttgtgtgttaa-attatgaaattgtcttttgtttgtatatgtattaaatttaactatttcatatttcaa-gacaagtta 6275551  T
Q  269 gtaatattaattaagagtatgtttagg 295  Q
     ||||||||||||   |||||||||||    
T  6275550 ataatattaattagaggtatgtttagg 6275524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 217 - 293
Target Start/End: Complemental strand, 2048864 - 2048789
Alignment:
Q  217 ctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgttta 293  Q
    |||||||||||||||||||||||||||||||| | ||||||| |||||||||||| |||| |||| | |||||||||    
T  2048864 ctttgtttgtatgtgtattaaatttgactttttatatttcaa-gacaagttagtagtatttattaggggtatgttta 2048789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 194 - 293
Target Start/End: Complemental strand, 36174849 - 36174751
Alignment:
Q  194 tgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgttta 293  Q
    ||||| |||||||  |||||||| ||| |||||||||||||||||||||||||||   |||||||| | |||||||| |||||||||| | |||||||||    
T  36174849 tgtgtgagtattattaaattgtcttttatttgtatgtgtattaaatttgacttttatcatttcaat-ataagttagtgatattaattaggggtatgttta 36174751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 42250957 - 42250837
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||||| |||||||| ||| | |||   ||||||| ||| ||| ||||||||||||||||||||||| | ||||||| |||||||||     
T  42250957 agtgtaattaatgtgtctattttgtgttttaatgtta---aattgtcatttatttatatgtgtattaaatttgactttttatatttcaa-gacaagttaa 42250862  T
Q  270 taatattaattaagagtatgtttag 294  Q
    || |||||||||  | |||||||||    
T  42250861 tagtattaattagaaatatgtttag 42250837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 196 - 258
Target Start/End: Complemental strand, 43119424 - 43119362
Alignment:
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    ||||| |||||| |||||||| |||||||||||||||||||||||||| |||||| |||||||    
T  43119424 tgttaatattactaaattgtcatttgtttgtatgtgtattaaatttgatttttcatatttcaa 43119362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 233
Target Start/End: Complemental strand, 44274746 - 44274685
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgta 233  Q
    ||||||||| ||||||||||| ||||||| |||| |||||||||| ||||||||||||||||    
T  44274746 tgtaattaatgtgtctgttttatgtgttaatattgccaaattgtcatttgtttgtatgtgta 44274685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 209 - 281
Target Start/End: Complemental strand, 2917143 - 2917072
Alignment:
Q  209 aaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    |||||||| |||||||||||||||||||||||| |||||| | |||| || |||||||||||| |||||||||    
T  2917143 aaattgtcttttgtttgtatgtgtattaaatttaactttttatattttaa-gacaagttagtagtattaatta 2917072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 4398605 - 4398545
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgt 230  Q
    ||||||||||| |||||| |||||||||||| |||||| |||||||| |||||||||||||    
T  4398605 agtgtaattaatgtgtctattttgtgtgttaatattacgaaattgtcatttgtttgtatgt 4398545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 204 - 272
Target Start/End: Complemental strand, 12498314 - 12498248
Alignment:
Q  204 ttaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaa 272  Q
    ||||||||||||  |||||||||||||||||||||||||| |||||| ||||||| |||||||||||||    
T  12498314 ttaccaaattgtt-tttgtttgtatgtgtattaaatttgatttttcatatttcaa-gacaagttagtaa 12498248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 189 - 281
Target Start/End: Original strand, 28190641 - 28190732
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    |||| ||||||| ||||||||||||||| ||||||||||| |||||||| ||| | |||||| ||||||| ||||| |||||| || ||||||    
T  28190641 ttttttgtgttaatattaccaaattgtcatttgtttgtatatgtattaagtttaatttttcatatttcaa-gacaatttagtagtaataatta 28190732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 295
Target Start/End: Complemental strand, 7258017 - 7257895
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagta 271  Q
    ||||||||| |||| ||||| |||| ||| |||||  |||||||| || ||||||| |||||| ||||||||||||| | |||| || || ||||||| |    
T  7258017 tgtaattaatgtgtttgtttagtgtattaatattattaaattgtcattcgtttgtacgtgtataaaatttgactttttatattttaa-gataagttagca 7257919  T
Q  272 atattaattaagagtatgtttagg 295  Q
    | |||||||||| |||| ||||||    
T  7257918 aaattaattaagggtatatttagg 7257895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 271
Target Start/End: Original strand, 8393234 - 8393332
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagta 271  Q
    |||| |||| |||| |||||||||||||| ||||| |||||| | |||||||||||||||| |||||||||  ||||||  |||||| || |||||||||    
T  8393234 tgtagttaatgtgtttgttttgtgtgttaatattatcaaatttttctttgtttgtatgtgttttaaatttgttttttcatgtttcaa-gataagttagta 8393332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 16808904 - 16808794
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| |||||| |||| | |||| ||| ||| |||||| |||||||| ||||||||||||| ||||||| || | |||||| ||||||| ||||||||||    
T  16808904 agtgcaattaatgtgtatattttatgtattaatattactaaattgtcatttgtttgtatgtatattaaaattaatttttcatatttcaa-gacaagttag 16808806  T
Q  270 taatattaatta 281  Q
    || ||| |||||    
T  16808805 tagtataaatta 16808794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 16848185 - 16848075
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| |||||| |||| | |||| ||| ||| |||||| |||||||| ||||||||||||| ||||||| || | |||||| ||||||| ||||||||||    
T  16848185 agtgcaattaatgtgtatattttatgtattaatattactaaattgtcatttgtttgtatgtatattaaaattaatttttcatatttcaa-gacaagttag 16848087  T
Q  270 taatattaatta 281  Q
    || ||| |||||    
T  16848086 tagtataaatta 16848075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 271
Target Start/End: Original strand, 36846781 - 36846879
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagta 271  Q
    |||| |||| |||| |||||||||||||| ||||| |||||| | |||||||||||||||| |||||||||  ||||||  |||||| || |||||||||    
T  36846781 tgtagttaatgtgtttgttttgtgtgttaatattatcaaatttttctttgtttgtatgtgttttaaatttgttttttcatgtttcaa-gataagttagta 36846879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 271
Target Start/End: Complemental strand, 44462660 - 44462562
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagta 271  Q
    |||| |||| |||| |||||||||||||| ||||| |||||| | |||||||||||||||| |||||||||  ||||||  |||||| || |||||||||    
T  44462660 tgtagttaatgtgtttgttttgtgtgttaatattatcaaatttttctttgtttgtatgtgttttaaatttgttttttcatgtttcaa-gataagttagta 44462562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 205 - 295
Target Start/End: Original strand, 20427149 - 20427237
Alignment:
Q  205 taccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    |||||||||||| ||| || |||||||||||||||||||||||||| ||||| |  ||||||| | | ||||||||||| |||||||||||    
T  20427149 taccaaattgtcatttatt-gtatgtgtattaaatttgacttttcatatttc-agaacaagtttgcagtattaattaagggtatgtttagg 20427237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 232 - 293
Target Start/End: Complemental strand, 44274538 - 44274478
Alignment:
Q  232 tattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgttta 293  Q
    ||||||||||||||||||||||||||| |||||||||||  ||||||||| | |||||||||    
T  44274538 tattaaatttgacttttcaaatttcaa-gacaagttagtggtattaattaggggtatgttta 44274478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 248
Target Start/End: Original strand, 6597882 - 6597957
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgactttt 248  Q
    |||||||||  ||||| ||||||||||||  ||||||||| | |||||| |||||||||||||||||||||| ||||    
T  6597882 tgtaattaatatgtctattttgtgtgttaacattaccaaaatatccttt-tttgtatgtgtattaaatttgaatttt 6597957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 170 - 291
Target Start/End: Complemental strand, 8384053 - 8383934
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgac-aagtta 268  Q
    |||| |||||| |||| | |||||||||||| ||||||||||||||| ||||| | ||  |||||||||| ||| |||||| ||||||| ||| ||  ||    
T  8384053 agtgcaattaatgtgtttattttgtgtgttaatattaccaaattgtcatttgtcttta--tgtattaaatatgatttttcatatttcaa-gactaaacta 8383957  T
Q  269 gtaatattaattaagagtatgtt 291  Q
    ||| ||||||||||| |||||||    
T  8383956 gtagtattaattaagggtatgtt 8383934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 171 - 258
Target Start/End: Original strand, 29971296 - 29971382
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||||||||| | ||||||||||| |||||  ||||| ||||| |  ||||||||||||| |||||||||| || |||||||||||||    
T  29971296 gtgtaattaatg-gtctgttttgtatgttaaaattactaaatttttttttgtttgtatgtctattaaatttaacatttcaaatttcaa 29971382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 31583692 - 31583638
Alignment:
Q  190 tttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgac 244  Q
    ||||||| ||| ||||| ||||||||||||||||||||||||  |||||||||||    
T  31583692 tttgtgtattaatattatcaaattgtcctttgtttgtatgtgctttaaatttgac 31583638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 255
Target Start/End: Complemental strand, 35453814 - 35453731
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaattt 255  Q
    ||||||||||| |||||| |||| | ||||| |||||| ||||||| |||||||| ||  |||||||||||| |||||||| ||||    
T  35453814 agtgtaattaatgtgtctattttatatgttaatattactaaattgttctttgttttta--tgtattaaatttaacttttcatattt 35453731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 11459326 - 11459375
Alignment:
Q  315 taatttaaaaagggatttacattgaaggataaaaataaaatcaaatggat 364  Q
    |||||||||||| |||||| ||| |||||||||||||||||| |||||||    
T  11459326 taatttaaaaagagatttatatttaaggataaaaataaaatcgaatggat 11459375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 250
Target Start/End: Complemental strand, 12417680 - 12417619
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttca 250  Q
    |||| ||||||| ||||| ||||||||  ||| |||||||||||||||||||||| ||||||    
T  12417680 ttttttgtgttaatattaacaaattgttttttatttgtatgtgtattaaatttgatttttca 12417619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 250
Target Start/End: Complemental strand, 12429740 - 12429679
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttca 250  Q
    |||| ||||||| ||||| ||||||||  ||| |||||||||||||||||||||| ||||||    
T  12429740 ttttttgtgttaatattaacaaattgttttttatttgtatgtgtattaaatttgatttttca 12429679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 15578160 - 15578091
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaattt 241  Q
    |||| |||| |||| |||||||||||||| ||||| |||||| | |||| ||||||||||| ||||||||    
T  15578160 tgtagttaatgtgtttgttttgtgtgttaatattatcaaatttttctttatttgtatgtgttttaaattt 15578091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 312 - 365
Target Start/End: Original strand, 24128983 - 24129035
Alignment:
Q  312 ttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatg 365  Q
    |||||||||||||| || |||||||| ||||| |||||||||||||||||||||    
T  24128983 ttgtaatttaaaaaagg-tttacatttaaggacaaaaataaaatcaaatggatg 24129035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 365
Target Start/End: Original strand, 534631 - 534687
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatg 365  Q
    |||| ||||||| ||||| | |||||||| ||||| |||||||||||||||||||||    
T  534631 atctagtaatttgaaaagaggtttacatttaaggacaaaaataaaatcaaatggatg 534687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 222 - 294
Target Start/End: Original strand, 6408705 - 6408776
Alignment:
Q  222 tttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttag 294  Q
    |||||||||||||||||||  |||||||| ||||||| || |||||| || ||||||||||  ||||||||||    
T  6408705 tttgtatgtgtattaaattcaacttttcatatttcaa-gaaaagttaatagtattaattaaaggtatgtttag 6408776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 192 - 282
Target Start/End: Original strand, 11121259 - 11121347
Alignment:
Q  192 tgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgac-aagttagtaatattaattaa 282  Q
    ||||||| | ||||| ||||||||||||||||  ||  ||||||||||||||||||| | ||||||| ||| ||||||||| ||||||||||    
T  11121259 tgtgtgtaaatattatcaaattgtcctttgtt--taaatgtattaaatttgactttttatatttcaa-gacaaagttagtagtattaattaa 11121347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 309 - 360
Target Start/End: Complemental strand, 7278552 - 7278501
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaat 360  Q
    |||| ||||||| |||||||||||||||| |  |||||||||||||||||||    
T  7278552 atctagtaatttgaaaagggatttacatttagagataaaaataaaatcaaat 7278501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 44101396 - 44101506
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| |||||| |||| | |||||||| ||| |||||| ||||| | |||| ||| |||||||||||||||||| |||| | ||||  | ||||||| ||    
T  44101396 agtgcaattaatgtgtttattttgtgttttaatattactaaattattctttatttatatgtgtattaaatttgattttttatattttga-gacaagtaag 44101494  T
Q  270 taatattaatta 281  Q
    || |||||||||    
T  44101495 tagtattaatta 44101506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 13477095 - 13477029
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaattt 255  Q
    |||| ||||||| |||||| | |||||||||| ||||||||  |||||||||||| |||||| ||||    
T  13477095 ttttatgtgttaatattactagattgtcctttatttgtatgcatattaaatttgatttttcatattt 13477029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 293
Target Start/End: Original strand, 20360609 - 20360678
Alignment:
Q  223 ttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgttta 293  Q
    |||||||| ||||||||||||||||| | |||||||  ||||||| | | ||||||||||| |||||||||    
T  20360609 ttgtatgtttattaaatttgactttttatatttcaa-aacaagtttgcagtattaattaagggtatgttta 20360678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 295
Target Start/End: Original strand, 534549 - 534613
Alignment:
Q  230 tgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||||||||||||||||||| ||||||| |||||| || || ||||||||| | |||| ||||||    
T  534549 tgtattaaatttgacttttcatatttcaa-gacaagataatagtattaattaggggtatatttagg 534613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 390
Target Start/End: Original strand, 17663790 - 17663871
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatgactacattaagggacggagcgagta 390  Q
    |||| ||||||| ||||||  |||||||| | ||| |||||||||||||||||| ||  |||||  |||||||||| |||||    
T  17663790 atctagtaatttgaaaaggagtttacatttagggacaaaaataaaatcaaatgggtgcttacatatagggacggagggagta 17663871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 390
Target Start/End: Original strand, 20362148 - 20362229
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatgactacattaagggacggagcgagta 390  Q
    |||| ||||||| ||||||  |||||||| | ||| |||||||||||||||||| ||  |||||  |||||||||| |||||    
T  20362148 atctagtaatttgaaaaggagtttacatttagggacaaaaataaaatcaaatgggtgcttacatatagggacggagggagta 20362229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 362
Target Start/End: Original strand, 27749633 - 27749686
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    |||||||||||| ||||||  |||||||| | ||| ||||||||||||||||||    
T  27749633 atcttgtaatttgaaaaggagtttacatttagggacaaaaataaaatcaaatgg 27749686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 250
Target Start/End: Complemental strand, 43638883 - 43638822
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttca 250  Q
    ||||| |||||| |||||| ||||| || ||| ||| |||||||||||||||||| ||||||    
T  43638883 ttttgcgtgttaatattacaaaattatcatttatttatatgtgtattaaatttgatttttca 43638822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 365
Target Start/End: Original strand, 4033992 - 4034048
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatg 365  Q
    |||| |||||||| ||||||  ||||||| |||||  ||||||||||||||||||||    
T  4033992 atctagtaatttagaaaggggattacatttaaggactaaaataaaatcaaatggatg 4034048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 27297537 - 27297593
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaa 152  Q
    |||| |||| |||||||||||||  | ||| |||| |||||||||||||||||||||    
T  27297537 tactccctctgtcccttaatgtaaaccccctttgcttttttcacatttcttaagaaa 27297593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 41865676 - 41865732
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaa 152  Q
    |||| ||||| |||||||||||| || ||  |||| |||||||||||||||||||||    
T  41865676 tactccctccttcccttaatgtaagccccttttgcttttttcacatttcttaagaaa 41865732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 44421409 - 44421465
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaa 152  Q
    |||| ||||||||||||||||||  | ||| || | |||||||||||||||||||||    
T  44421409 tactccctccgtcccttaatgtaaactccctttacttttttcacatttcttaagaaa 44421465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 365
Target Start/End: Original strand, 44424759 - 44424815
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatg 365  Q
    |||| ||||||| |||| || |||||||| | ||| |||||||||||||||||||||    
T  44424759 atctagtaatttgaaaaagggtttacatttagggacaaaaataaaatcaaatggatg 44424815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 1e-49; HSPs: 93)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 96 - 295
Target Start/End: Complemental strand, 5085233 - 5085045
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||          |||||||||| ||||||||||||||    
T  5085233 tactccctccgtcccttaatgtaggcacccattgcctttttcacattttttaagaaaagttgtca----------gtgtaattaatgtgtctgttttgtg 5085144  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| |||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||| || ||| ||||| ||||||||| | |||||||||||    
T  5085143 tgttaatattacgaaattgtcttttgtttgtatgtgtattaaatttgacttttcatatttcaa-gagaagatagtagtattaattaggggtatgtttagg 5085045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 101 - 295
Target Start/End: Complemental strand, 48722008 - 48721824
Alignment:
Q  101 cctccgtcccttaatgtaggcacccattgccttttt-cacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgtt 199  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| | | |||          |||||||||| ||||||||||||||||||    
T  48722008 cctccgtcccttaatgtaggcacccattgccttttttcacatttcttaagaaaagctgtca----------gtgtaattaatgtgtctgttttgtgtgtt 48721919  T
Q  200 agtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    | |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||| | |||||||||||    
T  48721918 aatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaagatagtagtattaattaggggtatgtttagg 48721824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 170 - 391
Target Start/End: Original strand, 51996978 - 51997203
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||||||||  ||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  51996978 agtgtaattaatttgtatgttttctgtgttaatattaccaaatcgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaaagacaagttag 51997077  T
Q  270 taatattaattaagagtatgtttagg----nnnnnnnnnntgtatcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatg 365  Q
    || |||||||||||||||||||||||              || || ||||||||| |||||||  ||||||| | ||| |||||||||||||||||| ||    
T  51997078 tagtattaattaagagtatgtttaggaaaaaaataataaatgcatattgtaatttgaaaaggggattacatttagggacaaaaataaaatcaaatgggtg 51997177  T
Q  366 actacattaagggacggagcgagtat 391  Q
     |||||||||||||| ||| ||||||    
T  51997178 gctacattaagggacagagggagtat 51997203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 96 - 295
Target Start/End: Original strand, 33231799 - 33231987
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||| ||| ||| |||          |||||||||| ||||||||||||||    
T  33231799 tactccctccgtcccttaatgtagccatccattgcctttttcacatttcttaaaaaaagttgtca----------gtgtaattaatgtgtctgttttgtg 33231888  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| |||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||| ||||  ||||||||| | |||||||||||    
T  33231889 tgttaatattacgaaattgtcctttgtttgtatgtgtattaaatctgacttttcatatttcaa-gacaagatagtggtattaattaggggtatgtttagg 33231987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 170 - 360
Target Start/End: Original strand, 46495332 - 46495525
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||||||||||||||||||| ||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||     
T  46495332 agtgtaattaatgtgtctgttttgtgtgttaatattatcaaattgtcctttatttgtatgtatattaaatttgacttttcaaatttcaaagacaagttaa 46495431  T
Q  270 taatattaattaagagtatgtttagg---nnnnnnnnnntgtatcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaat 360  Q
    || ||||||||||| ||||| |||||             || ||||||||||||||||| ||||||||||| | ||| ||||||||||||||||    
T  46495432 tagtattaattaagcgtatgcttaggaaaaaataataaatgcatcttgtaatttaaaaaaggatttacatttacggacaaaaataaaatcaaat 46495525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 96 - 292
Target Start/End: Original strand, 3143362 - 3143547
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||| |||||||||           ||||||| ||||||    
T  3143362 tactccctctgtcccttaatgtaggcacccattgcttttttcacatttcttaagaaaagttgtcattgtaattaat----------gtgtctgctttgtg 3143451  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgttt 292  Q
    ||||| |||||| |||||||| ||||||| ||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||| | ||||||||    
T  3143452 tgttaatattacaaaattgtcttttgtttttatgtgtattaaatttgacttttcatatttcaa-gacaagatagtagtattaattaggggtatgttt 3143547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 170 - 293
Target Start/End: Original strand, 44335312 - 44335438
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgt---attaaatttgacttttcaaatttcaatgacaagt 266  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||   |||||||||||||||||||||||||| |||||||    
T  44335312 agtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcctttgtttgtacgtgtataattaaatttgacttttcaaatttcaaagacaagt 44335411  T
Q  267 tagtaatattaattaagagtatgttta 293  Q
    ||||| |||||||||||  ||||||||    
T  44335412 tagtagtattaattaaggatatgttta 44335438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 96 - 295
Target Start/End: Complemental strand, 44653002 - 44652817
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| ||||||||| ||||||||| ||  ||||||| ||||||||||||||||||||||||             ||||||||||| ||||||||||||||    
T  44653002 tactccctccgtcctttaatgtagccattcattgccattttcacatttcttaagaaatgtt-------------agtgtaattaatgtgtctgttttgtg 44652916  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    | ||| |||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||  ||||||||||| ||||||||| | |||||||||||    
T  44652915 ttttaatattaccacattgttctttgtttgtatgtgtattaaatttgacttttcatatttcaa-aacaagttagtagtattaattaggggtatgtttagg 44652817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 96 - 294
Target Start/End: Complemental strand, 29140798 - 29140611
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| ||||||||| ||||||||| || | ||||||||||||||||||||||||||| |||  |           |||||||||| ||||||||||||||    
T  29140798 tactccctccgtcctttaatgtagtcatctattgcctttttcacatttcttaagaaaagttgccg----------gtgtaattaatgtgtctgttttgtg 29140709  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttag 294  Q
    | ||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||  ||||||||| | ||||||||||    
T  29140708 tattaatattacaaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaagatagtggtattaattaggggtatgtttag 29140611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 187 - 293
Target Start/End: Complemental strand, 4817969 - 4817864
Alignment:
Q  187 tgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagt 286  Q
    |||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  4817969 tgttttgtgtattaatattatcaaattgtcttttgtttgtatgtgtattaaatttgacttttcaaatttcaa-gacaagttagtagtattaattaagagt 4817871  T
Q  287 atgttta 293  Q
    |||||||    
T  4817870 atgttta 4817864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 187 - 293
Target Start/End: Complemental strand, 4829769 - 4829664
Alignment:
Q  187 tgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagt 286  Q
    |||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  4829769 tgttttgtgtattaatattatcaaattgtcttttgtttgtatgtgtattaaatttgacttttcaaatttcaa-gacaagttagtagtattaattaagagt 4829671  T
Q  287 atgttta 293  Q
    |||||||    
T  4829670 atgttta 4829664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 96 - 281
Target Start/End: Original strand, 16582492 - 16582666
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| |||| || ||||||||||| || |||||| |||||||||||||||||||||| ||| |||          |||||||||| ||||||||||||||    
T  16582492 tactccctctgttccttaatgtagccatccattgtctttttcacatttcttaagaaaagttgtca----------gtgtaattaatgtgtctgttttgtg 16582581  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    ||||| |||||| |||||||| ||| ||||||||||||||||||||||||||||| ||||||| |||||| |||| ||||||||||    
T  16582582 tgttaatattacgaaattgtcttttatttgtatgtgtattaaatttgacttttcatatttcaa-gacaagatagtgatattaatta 16582666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 102 - 292
Target Start/End: Original strand, 47643508 - 47643684
Alignment:
Q  102 ctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttag 201  Q
    |||||||||||||||||  | ||| |||| ||||||||||||||||||||| ||| |||          |||||||||| |||| ||||||||||  ||     
T  47643508 ctccgtcccttaatgtaaactccctttgc-tttttcacatttcttaagaaaagttgtca----------gtgtaattaatgtgtatgttttgtgt--taa 47643594  T
Q  202 tattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgttt 292  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||    
T  47643595 tattactaaattgtcctttgtttgcatgtgtattaaatttgacttttcaaatttcaa-gacaagttagtagtattaattaagggtatgttt 47643684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 101 - 293
Target Start/End: Original strand, 32047406 - 32047586
Alignment:
Q  101 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgtta 200  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||          ||||||||||| |||| ||||||||||||||    
T  32047406 cctccgtcccttaatgtaggcacccattgcttttttcacatttcttaagaaaagttgtc----------agtgtaattaatgtgtttgttttgtgtgtta 32047495  T
Q  201 gtattaccaaattgtcctttgtttgtatgtgtattaaatttgac-ttttcaaatttcaatgacaagttagtaatattaattaagagtatgttta 293  Q
     |||||| |||||||| ||||||||||||||  ||||||||||| |||||| ||||||| |||||| ||||| ||||| ||| | |||||||||    
T  32047496 atattacgaaattgtcatttgtttgtatgtg--ttaaatttgactttttcatatttcaa-gacaagatagtagtattatttaggggtatgttta 32047586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 46591125 - 46591235
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||| |||||||||||||| ||||| | ||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||    
T  46591125 agtgtaattaatgtgtttgttttgtgtgttaatattatcgaattgtcctttgtttctatgtgtattaaatttgatttttcaaatttcaa-gacaagttag 46591223  T
Q  270 taatattaatta 281  Q
    ||||||||||||    
T  46591224 taatattaatta 46591235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 103 - 295
Target Start/End: Complemental strand, 9675804 - 9675623
Alignment:
Q  103 tccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttagt 202  Q
    ||||||||||||||||||||||||||| |||||| || |||||||||||| ||| ||| ||||||||| |          |||||| ||||||||||| |    
T  9675804 tccgtcccttaatgtaggcacccattgacttttttacgtttcttaagaaaagttgtcagtgtaattaatt----------tgtctgatttgtgtgttaat 9675715  T
Q  203 attaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| |||||||||||| |||||||||||||||||||||||| |||| |||||||  | ||| || |||||||||||| | |||||||||||    
T  9675714 attacgaaattgtcctttatttgtatgtgtattaaatttgactattcatatttcaa-aataagataataatattaattaggggtatgtttagg 9675623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 96 - 295
Target Start/End: Complemental strand, 5322167 - 5321979
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| |||||||||||||||||||||| | ||||||||||||| |||| |||||||| ||| |||||||||||||           ||||||||||||||    
T  5322167 tactccctccgtcccttaatgtaggcatctattgcctttttcatattttttaagaaaagttatcaatgtaattaat----------gtgtctgttttgtg 5322078  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||  |||||| |||||||  ||||||||||| ||||||||| ||||||||||| ||||||| |||||| ||||| |||||| || | |||||||||||    
T  5322077 tgtttatattacgaaattgttatttgtttgtatatgtattaaaattgacttttcatatttcaa-gacaagatagtagtattaactaggggtatgtttagg 5321979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 183 - 295
Target Start/End: Original strand, 13145454 - 13145565
Alignment:
Q  183 tgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaa 282  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||| || || |||||||||||||||||||     
T  13145454 tgtctgttttgtatgttaatattaccaaattgtcctttgtttgtatgtgcattaaatttgacttttcatattttaa-gataagttagtaatattaattag 13145552  T
Q  283 gagtatgtttagg 295  Q
    | |||||||||||    
T  13145553 gggtatgtttagg 13145565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 28723733 - 28723607
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttc--aaatttcaatgacaagtt 267  Q
    ||||||||||| |||||| |||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||  | ||||||| ||||||||    
T  28723733 agtgtaattaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtattaaatttgacttttcatatatttcaa-gacaagtt 28723635  T
Q  268 agtaatattaattaagagtatgtttagg 295  Q
     ||||||||||||| | |||||||||||    
T  28723634 ggtaatattaattaggggtatgtttagg 28723607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 8984741 - 8984631
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||| || || ||||    
T  8984741 agtgtaattaatgtgtctgttttgtgtgttaatattactaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaa-gataaattag 8984643  T
Q  270 taatattaatta 281  Q
    || |||||||||    
T  8984642 tagtattaatta 8984631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 175 - 295
Target Start/End: Complemental strand, 51390609 - 51390493
Alignment:
Q  175 aattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaata 274  Q
    |||||| |||||| ||||||||||||   ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |     
T  51390609 aattaatgtgtctattttgtgtgtta---ttaccaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaagttagtagtt 51390514  T
Q  275 ttaattaagagtatgtttagg 295  Q
    ||||||||| |||||||||||    
T  51390513 ttaattaagggtatgtttagg 51390493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 182 - 295
Target Start/End: Original strand, 25063245 - 25063357
Alignment:
Q  182 gtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| | ||||||||||||  ||||||||    
T  25063245 gtgtctgttttgtgtgttaatattacctaattgtcctttgtttgtatgtgtattaaatttcacttttcatatttc-acgacaagttagtaggattaatta 25063343  T
Q  282 agagtatgtttagg 295  Q
     | |||||||||||    
T  25063344 ggggtatgtttagg 25063357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 96 - 295
Target Start/End: Complemental strand, 23982736 - 23982548
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| |||||||||||  ||||| |  ||| |||| ||||||||||||||||||||| ||| |||||||||||||           ||||||||||||||    
T  23982736 tactccctccgtccctatatgtaagtcccctttgcatttttcacatttcttaagaaaagttgtcaatgtaattaat----------gtgtctgttttgtg 23982647  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| ||||| ||||||| | ||||||||||| ||||||||||||||||||||| ||||||| || ||||||||| ||||||||| |  ||||||||||    
T  23982646 tgttaatattatcaaattgacatttgtttgtatatgtattaaatttgacttttcatatttcaa-gataagttagtagtattaattagggatatgtttagg 23982548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 175 - 295
Target Start/End: Original strand, 32152186 - 32152305
Alignment:
Q  175 aattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaata 274  Q
    |||||| |||||| |||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||| |||| || || ||||||||| ||    
T  32152186 aattaatgtgtctattttgtgtgttaatattaccaaattgttatttgtttgtatgtgtattaaatttgacttttcatattttaa-gataagttagtagta 32152284  T
Q  275 ttaattaagagtatgtttagg 295  Q
    ||||||| | |||||||||||    
T  32152285 ttaattaggggtatgtttagg 32152305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 47071041 - 47070931
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||||| |||| ||||||| ||||||||||||||| |||||||||||| ||||||||||||| |||||| ||||||| ||||||||||    
T  47071041 agtgtaattaatgtgtctattttatgtgttaatattaccaaattgtcatttgtttgtatgcgtattaaatttgatttttcatatttcaa-gacaagttag 47070943  T
Q  270 taatattaatta 281  Q
    || |||||||||    
T  47070942 tagtattaatta 47070931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 106 - 294
Target Start/End: Original strand, 30336028 - 30336205
Alignment:
Q  106 gtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttagtatt 205  Q
    ||||| |||||||| ||| |||||| ||||||||||||||||||||| ||| ||           |||||||||| |||||| |||||||||||| ||||    
T  30336028 gtcccataatgtagacactcattgcttttttcacatttcttaagaaaagttgtcg----------gtgtaattaatgtgtctattttgtgtgttaatatt 30336117  T
Q  206 accaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttag 294  Q
    ||||||||||||||||||| |||| |||| |||||||| |||||| ||||||| || ||||||||| ||||||||| |  |||||||||    
T  30336118 accaaattgtcctttgtttctatgcgtataaaatttgaattttcatatttcaa-gataagttagtagtattaattagggatatgtttag 30336205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 2342934 - 2343037
Alignment:
Q  177 ttaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatatt 276  Q
    |||| |||||| |||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| | |||||||||| ||||    
T  2342934 ttaatgtgtctattttgtgtgttaatattaccaaattgtcttttgtttgtgtgtgtattaaatttgacttttcatatttcaa-ggcaagttagtagtatt 2343032  T
Q  277 aatta 281  Q
    |||||    
T  2343033 aatta 2343037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 102 - 293
Target Start/End: Original strand, 8877737 - 8877917
Alignment:
Q  102 ctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttag 201  Q
    |||||||| ||||||||| ||| |||||||||||||| |||| ||||||||  || |||          || ||||||| |||| ||||||||||||||     
T  8877737 ctccgtcctttaatgtagacactcattgcctttttcatattttttaagaaaaattgtca----------gtataattaatgtgtttgttttgtgtgttaa 8877826  T
Q  202 tattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgttta 293  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||| | ||||||| || ||| ||||| ||||||||| | |||||||||    
T  8877827 tattacgaaattgtcatttgtttgtatgtgtattaaatttgactttttatatttcaa-gataagatagtagtattaattaggggtatgttta 8877917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 15911632 - 15911509
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||| |||| |||||| |||||||||||| |||||||||||   | |||||||||||||||||||||| |||| ||||| ||||||| ||||||||||    
T  15911632 agtgtacttaatgtgtctattttgtgtgttaatattaccaaataaccatttgtttgtatgtgtattaaatgtgacatttcatatttcaa-gacaagttag 15911534  T
Q  270 taatattaattaagagtatgtttag 294  Q
    |||||||||||||  ||||||||||    
T  15911533 taatattaattaaaggtatgtttag 15911509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 171 - 258
Target Start/End: Original strand, 31305342 - 31305429
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||||||||| |||||| |||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31305342 gtgtaattaatgtgtctattttgtatgctaatattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaa 31305429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 177 - 295
Target Start/End: Original strand, 32144341 - 32144458
Alignment:
Q  177 ttaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatatt 276  Q
    |||| |||||| ||||||| |||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| |||| || ||||||||| |||||||    
T  32144341 ttaatgtgtctattttgtgcgttaatattaccaaattgtcatttgtttgtatgtgtataaaatttgacttttcatattttaa-gacaagttaataatatt 32144439  T
Q  277 aattaagagtatgtttagg 295  Q
    ||||| |  ||||||||||    
T  32144440 aattagggatatgtttagg 32144458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 96 - 281
Target Start/End: Complemental strand, 34697027 - 34696853
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| |||||||||||||||||||| | ||| || ||||||||||||| |||||||| ||| |||          ||||||||||  |||||||||||||    
T  34697027 tactccctccgtcccttaatgtagggatccactgtctttttcacattttttaagaaaagttgtca----------gtgtaattaatatgtctgttttgtg 34696938  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    ||||| |||||| |||||||| |||||||||||||| || ||||||||||||||  ||||||| |||||  ||||| |||||||||    
T  34696937 tgttaatattacgaaattgtcatttgtttgtatgtgcatgaaatttgacttttcctatttcaa-gacaaaatagtagtattaatta 34696853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 170 - 271
Target Start/End: Complemental strand, 13723558 - 13723458
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| |||||| |||||| |||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| || |||||||    
T  13723558 agtgcaattaatgtgtctattttgtgtattaatattaccaaattatcctttgtttgtatgtgtattaaatttgacttttcatatttcaa-gataagttag 13723460  T
Q  270 ta 271  Q
    ||    
T  13723459 ta 13723458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 15512861 - 15512737
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||| |||| |||||| |||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||   ||||||| ||||| ||||    
T  15512861 agtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgactttttgtatttcaa-gacaaattag 15512763  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    ||  |||||||| | |||||||||||    
T  15512762 taggattaattaggggtatgtttagg 15512737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 20564798 - 20564922
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||| ||| ||||||  ||| ||||||| |||||| |||||||| |||||||| |||||||||||||||||||||||| ||||||| ||||||||||    
T  20564798 agtgtaactaatgtgtctactttatgtgttaatattacaaaattgtcttttgtttgaatgtgtattaaatttgacttttcatatttcaa-gacaagttag 20564896  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || |||||||||   |||||||||||    
T  20564897 tagtattaattagatgtatgtttagg 20564922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 28949044 - 28948920
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||| |||| |||||| |||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||   ||||||| ||||| ||||    
T  28949044 agtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgactttttgtatttcaa-gacaaattag 28948946  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    ||  |||||||| | |||||||||||    
T  28948945 taggattaattaggggtatgtttagg 28948920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 30898643 - 30898519
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||| ||||| |||| |||| || || |||||||    
T  30898643 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcctttgtttgtatgtgtattaaatgtgactattcatattttaa-gataagttag 30898545  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    ||  ||||| || | |||||||||||    
T  30898544 tagcattaaataggggtatgtttagg 30898519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 16395627 - 16395505
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagt 270  Q
    |||||||||| |||||| |||||| ||||| |||||||||||| || ||||||||||||||| | ||||||||||||||| ||||| || |||||||| |    
T  16395627 gtgtaattaatgtgtctattttgtatgttaatattaccaaattatcttttgtttgtatgtgtgtaaaatttgacttttcatatttc-ataacaagttaat 16395529  T
Q  271 aatattaattaagagtatgtttagg 295  Q
    |||||||||||| ||| ||||||||    
T  16395528 aatattaattaa-agtgtgtttagg 16395505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 35366064 - 35365941
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||| ||| || ||| |||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||| |||| || |||||||||     
T  35366064 agtgtaagtaatgtatctattttgtgtgttaatattatcaaattgtcttttgtttgtatgtgtattaaatttgacttttcatattttaa-gacaagttaa 35365966  T
Q  270 taatattaattaagagtatgtttag 294  Q
     | ||||||||||  ||||||||||    
T  35365965 cagtattaattaaaggtatgtttag 35365941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 170 - 258
Target Start/End: Complemental strand, 47754722 - 47754634
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||| |||||| |||||| |||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  47754722 agtgcaattaatgtgtctattttttgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaa 47754634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 15179433 - 15179543
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||||| |||| || || | |||||| |||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  15179433 agtgtaattaatgtgtctattttatgcgtaaatattacaaaattgtcctttgtttgtatgtgtattaaatttgacttttcgtatttcaa-gacaagttag 15179531  T
Q  270 taatattaatta 281  Q
    ||  ||||||||    
T  15179532 taggattaatta 15179543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 171 - 258
Target Start/End: Original strand, 24415024 - 24415111
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||||||||| || ||| |||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||| |||||||    
T  24415024 gtgtaattaatgtatctcttttgtgtgttaatattaccaaattatcatttgtttgtatgtgtattaaatttgacttttcatatttcaa 24415111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 170 - 293
Target Start/End: Original strand, 25269400 - 25269522
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||| ||| ||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||| ||||| | | |||| ||     
T  25269400 agtgtaaataatgtgtctgttttatgtgttaatattacgaaattttcctttgtttgtatgtgtattaaatttgacttttcatatttcga-ggcaagataa 25269498  T
Q  270 taatattaattaagagtatgttta 293  Q
    | |||||||||| | |||||||||    
T  25269499 tgatattaattaggggtatgttta 25269522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 31808052 - 31807942
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||||| |||||||||||| |||||||||||| || |||||||| |||||||| ||||||||| ||||  ||||||| ||||||||||    
T  31808052 agtgtaattaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgcatgtgtatcaaatttgacatttcctatttcaa-gacaagttag 31807954  T
Q  270 taatattaatta 281  Q
    || |||||||||    
T  31807953 tagtattaatta 31807942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 95 - 293
Target Start/End: Original strand, 36084928 - 36085115
Alignment:
Q  95 ttacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgt 194  Q
    ||||||| | ||||||||||||||||||  ||||| ||||||||||||| ||||||||  || |||          |||||||||| || ||||||||||    
T  36084928 ttacttctttcgtcccttaatgtaggcaatcattgtctttttcacattttttaagaaaaattatca----------gtgtaattaatgtatctgttttgt 36085017  T
Q  195 gtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgttta 293  Q
    |||||| |||||  ||||| |||||| |||||||||||||||||||| |||||||| ||||| | |||||| || || ||||||||| | |||||||||    
T  36085018 gtgttaatattaagaaattatcctttatttgtatgtgtattaaatttaacttttcatatttcga-gacaagataatagtattaattaggggtatgttta 36085115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 172 - 258
Target Start/End: Original strand, 34102361 - 34102447
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    ||||||||| ||||||||||||||||||| ||||| |||||| | |||||||||||||| ||||||||||||||||||| |||||||    
T  34102361 tgtaattaatgtgtctgttttgtgtgttaatattatcaaattattctttgtttgtatgtttattaaatttgacttttcatatttcaa 34102447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 103 - 247
Target Start/End: Complemental strand, 35001407 - 35001273
Alignment:
Q  103 tccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttagt 202  Q
    ||||||||||||| ||||||||||||| ||||||||||||| |||||||| ||| |||          ||||||| ||  |||||||||||||||||| |    
T  35001407 tccgtcccttaatctaggcacccattgtctttttcacatttattaagaaaagttgtca----------gtgtaatcaaaatgtctgttttgtgtgttaat 35001318  T
Q  203 attaccaaattgtcctttgtttgtatgtgtattaaatttgacttt 247  Q
     |||  ||||||||||||||||||||||||||||||||| |||||    
T  35001317 gttatgaaattgtcctttgtttgtatgtgtattaaatttaacttt 35001273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 182 - 295
Target Start/End: Complemental strand, 52141243 - 52141131
Alignment:
Q  182 gtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    |||||| |||||||||||| ||||| |||||| || ||||||||||||||||||||||||||||||| | |||| || ||||||||||||||||||| ||    
T  52141243 gtgtctattttgtgtgttaatattatcaaattatcttttgtttgtatgtgtattaaatttgactttttatattttaa-gacaagttagtaatattaacta 52141145  T
Q  282 agagtatgtttagg 295  Q
     |  ||||||||||    
T  52141144 gggatatgtttagg 52141131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 175 - 295
Target Start/End: Complemental strand, 4813537 - 4813418
Alignment:
Q  175 aattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaata 274  Q
    |||||| |||||| |||||||||||| |||||||||||| | |||||||||||||||| ||||||||||||||||| |||||||  | |||||||   ||    
T  4813537 aattaatgtgtctattttgtgtgttaatattaccaaattattctttgtttgtatgtgtgttaaatttgacttttcatatttcaa-aataagttagccgta 4813439  T
Q  275 ttaattaagagtatgtttagg 295  Q
    ||||||| || ||||||||||    
T  4813438 ttaattaggaatatgtttagg 4813418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 38680498 - 38680586
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    ||||||||||| |||||| |||||||||||| ||||| ||||||||| ||||||||||||||||||||||||| |||| || |||||||    
T  38680498 agtgtaattaatgtgtctattttgtgtgttaatattatcaaattgtcatttgtttgtatgtgtattaaatttgtctttgcatatttcaa 38680586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 175 - 257
Target Start/End: Original strand, 50692437 - 50692520
Alignment:
Q  175 aattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtat-taaatttgacttttcaaatttca 257  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||| ||||||    
T  50692437 aattaatgtgtctattttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtttataaatttgactgttcatatttca 50692520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 170 - 294
Target Start/End: Original strand, 25258353 - 25258477
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgac-ttttcaaatttcaatgacaagtta 268  Q
    |||| |||||| |||||| |||| ||| ||  |||||||||||||||||||||||||||||||||||||||| || ||||||  ||||||  |||| |||    
T  25258353 agtgcaattaatgtgtctattttatgtcttgatattaccaaattgtcctttgtttgtatgtgtattaaatttaactttttcatgtttcaa-aacaattta 25258451  T
Q  269 gtaatattaattaagagtatgtttag 294  Q
    ||| ||||||||| ||||||||||||    
T  25258452 gtagtattaattaggagtatgtttag 25258477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 94 - 295
Target Start/End: Original strand, 3831006 - 3831194
Alignment:
Q  94 attacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttg 193  Q
    |||||| | ||||||||||||||||  |||| ||||| |||||||||||| |||||||| ||| |||            || ||||| || ||| |||||    
T  3831006 attactccttccgtcccttaatgtaaacacctattgcatttttcacattttttaagaaaagttatca------------gttattaatgtatctattttg 3831093  T
Q  194 tgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgttta 293  Q
    ||||||| |||||| |||||||| ||||||||||||| | ||||||||||||||||| ||||||| |||||| ||| | ||||||||| |  ||||||||    
T  3831094 tgtgttaatattacgaaattgtcatttgtttgtatgtatgttaaatttgacttttcatatttcaa-gacaagatagaagtattaattagggatatgttta 3831192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 119 - 281
Target Start/End: Original strand, 44395517 - 44395668
Alignment:
Q  119 ggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcct 218  Q
    ||||||||||| | |||||||||||||||||||||||| |||          ||||||||||  ||| | |||| ||||||| |||||| ||||| ||||    
T  44395517 ggcacccattgtccttttcacatttcttaagaaatgttgtca----------gtgtaattaatatgtttattttatgtgttaatattacaaaattatcct 44395606  T
Q  219 ttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    |||||||||||| |||||||||||| |||||| ||||||| |||| |||| || |||||||||    
T  44395607 ttgtttgtatgtatattaaatttgatttttcatatttcaa-gacatgttaatagtattaatta 44395668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 15457876 - 15457775
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtat 288  Q
    ||||||||| || ||||| ||||||||| |||||||||||||||||||||||||| |||||| ||||| |  |||| |||||||||||||||| || |||    
T  15457876 ttttgtgtgataatattatcaaattgtcatttgtttgtatgtgtattaaatttgatttttcatatttc-agaacaaattagtaatattaattaggaatat 15457778  T
Q  289 gtt 291  Q
    |||    
T  15457777 gtt 15457775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 182 - 295
Target Start/End: Complemental strand, 291703 - 291591
Alignment:
Q  182 gtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    |||||| |||||| ||||| |||||| |||||||| ||||||||||| |||||||||||| |||||| | |||| || || ||||||||| |||||||||    
T  291703 gtgtctattttgtatgttaatattactaaattgtcatttgtttgtatttgtattaaatttaactttttatattttaa-gataagttagtagtattaatta 291605  T
Q  282 agagtatgtttagg 295  Q
     |||||| ||||||    
T  291604 ggagtatatttagg 291591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 210 - 295
Target Start/End: Original strand, 34012550 - 34012634
Alignment:
Q  210 aattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    |||| |||||||||| |||||||||||||||| |||||||| ||||||| |||||| ||||| ||||||||||| |||||||||||    
T  34012550 aattttcctttgtttatatgtgtattaaatttaacttttcatatttcaa-gacaagatagtagtattaattaagggtatgtttagg 34012634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 41737148 - 41737221
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttga 243  Q
    |||||||||||  ||||| |||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  41737148 agtgtaattaaaatgtctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgttttaaatttga 41737221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 171 - 258
Target Start/End: Complemental strand, 5852928 - 5852843
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||||||||| ||||  ||||| ||||||| |||| | ||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  5852928 gtgtaattaatgtgt--gttttatgtgttaatattccgaaattgtcctttgtttgcatgtgtattaaatttgacttttcatatttcaa 5852843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 10160673 - 10160752
Alignment:
Q  91 ctaattacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaa 170  Q
    ||||||||| ||||| ||||||||| |||||| || |||||||||||||||||||||||||| ||| ||| |||||||||    
T  10160673 ctaattactccctccatcccttaatataggcatccgttgcctttttcacatttcttaagaaaagttatcagtgtaattaa 10160752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 27531126 - 27531244
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaat 273  Q
    ||||||| |||| |||||||||||||| ||||||  |||||| |||||||||||||| ||  |||||| ||  | || ||||||| || |||||||||||    
T  27531126 taattaatgtgtttgttttgtgtgttaatattacttaattgttctttgtttgtatgtataaaaaatttaaccctacatatttcaa-gataagttagtaat 27531224  T
Q  274 attaattaagagtatgttta 293  Q
    |||||||| |||||||||||    
T  27531225 attaattatgagtatgttta 27531244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 175 - 291
Target Start/End: Original strand, 13352862 - 13352976
Alignment:
Q  175 aattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgac-aagttagtaat 273  Q
    |||||| ||||||||||| ||||||| ||||| ||||||||| ||| ||||||  ||||||| ||||| ||||||| ||||| | ||| ||||||||| |    
T  13352862 aattaatgtgtctgttttatgtgttaatattagcaaattgtcatttatttgta--tgtattatatttgccttttcatatttcga-gacaaagttagtagt 13352958  T
Q  274 attaattaagagtatgtt 291  Q
    ||||||||||||||||||    
T  13352959 attaattaagagtatgtt 13352976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 115 - 295
Target Start/End: Complemental strand, 28334340 - 28334177
Alignment:
Q  115 tgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttagtattaccaaattg 214  Q
    ||||| ||||||||| |||||||||||||||||||||| ||| |||          |||||||||| |||||||||||||||||||      | ||||||    
T  28334340 tgtagtcacccattgtctttttcacatttcttaagaaaagttgtca----------gtgtaattaatgtgtctgttttgtgtgtta------cgaaattg 28334257  T
Q  215 tcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||||| || |||||||||||||||||| |||||| |||| || | |||| ||||  ||||||||| | |||||||||||    
T  28334256 tcctttgcttatatgtgtattaaatttgaattttcatattttaa-ggcaagatagtggtattaattaggggtatgtttagg 28334177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 170 - 294
Target Start/End: Original strand, 3072162 - 3072283
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| |||||| |||| | |||| ||||||| |||||  |||||||  ||| ||| ||||||||||||||||||||||||| ||||||| ||||||||||    
T  3072162 agtgcaattaatgtgtttattttatgtgttaatattattaaattgt--tttttttttatgtgtattaaatttgacttttcatatttcaa-gacaagttag 3072258  T
Q  270 taatattaattaagagtatgtttag 294  Q
    || |||||||||   ||||||||||    
T  3072259 tagtattaattagaggtatgtttag 3072283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 190 - 295
Target Start/End: Original strand, 4081969 - 4082073
Alignment:
Q  190 tttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatg 289  Q
    ||||| ||||| |||||| ||||| || ||||| |||||||||||||||||||| |||||| |||| || |||||||||||| ||||||||| |  ||||    
T  4081969 tttgtatgttaatattactaaattatcatttgtctgtatgtgtattaaatttgatttttcatattt-aaagacaagttagtattattaattagggatatg 4082067  T
Q  290 tttagg 295  Q
    ||||||    
T  4082068 tttagg 4082073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 10842374 - 10842438
Alignment:
Q  194 tgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    ||||||| |||||||||||| || ||||||||||||||| ||||||||||||||||| |||||||    
T  10842374 tgtgttaatattaccaaattatcgtttgtttgtatgtgtgttaaatttgacttttcatatttcaa 10842438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 34331910 - 34332001
Alignment:
Q  182 gtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaata 274  Q
    |||||| |||||||||| |||| |||  |||| || ||||||| ||||||||||||||||||||||||| ||||||| || ||||||||||||    
T  34331910 gtgtctattttgtgtgtgagtagtactgaattatcttttgtttatatgtgtattaaatttgacttttcatatttcaa-gagaagttagtaata 34332001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 167
Target Start/End: Complemental strand, 29302593 - 29302522
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaat 167  Q
    ||||||||||| | ||||||||||||| ||||| ||||||||||||||||||||||| ||| ||| ||||||    
T  29302593 tacttcctccgacgcttaatgtaggcatccattccctttttcacatttcttaagaaaagttgtcagtgtaat 29302522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 170 - 271
Target Start/End: Complemental strand, 3143814 - 3143716
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||||| ||||||||  || ||||| ||||||||| ||||||||||||| |||||||| | | |||||| ||||||| ||||||||||    
T  3143814 agtgtaattaatgtgtctattttgtgt--tattattatcaaattgtcttttgtttgtatgtttattaaatattatttttcatatttcaa-gacaagttag 3143718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 44163255 - 44163321
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtatta 236  Q
    ||||||||||| |||| |||||||||||||| |||||  |||||||| |||||||||||||||||||    
T  44163255 agtgtaattaatgtgtttgttttgtgtgttaatattattaaattgtcatttgtttgtatgtgtatta 44163321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 40261618 - 40261727
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgac-aagtta 268  Q
    |||| |||||| |||| | |||||||||||| ||||| ||||||| ||||||||  ||| ||||||||||||||||||| | ||||||| ||| ||||||    
T  40261618 agtgcaattaatgtgtttattttgtgtgttaatattatcaaattgccctttgtt--tatatgtattaaatttgactttttatatttcaa-gacaaagtta 40261714  T
Q  269 gtaatattaatta 281  Q
    || ||||||||||    
T  40261715 gtgatattaatta 40261727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 222 - 295
Target Start/End: Complemental strand, 46732988 - 46732916
Alignment:
Q  222 tttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| |||||| || |||||| | |||||||||||    
T  46732988 tttgtatgtgtattaaatttgacttttcatatttcaa-gacaaattagtagtaataattaggggtatgtttagg 46732916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 175 - 295
Target Start/End: Complemental strand, 28679896 - 28679778
Alignment:
Q  175 aattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaata 274  Q
    |||||| |||||| |||||||||||| |||||  |||||||  |||||||||||||||||||||||||| |||| | ||||||| || |||||  || ||    
T  28679896 aattaatgtgtctattttgtgtgttaatattattaaattgtt-tttgtttgtatgtgtattaaatttgatttttaatatttcaa-gataagtttttagta 28679799  T
Q  275 ttaattaagagtatgtttagg 295  Q
    ||||||| | |||| ||||||    
T  28679798 ttaattaggggtatttttagg 28679778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 10160783 - 10160823
Alignment:
Q  218 tttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  10160783 tttgtttgtatgtgtattaaatttgacttttcatatttcaa 10160823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 12845130 - 12845070
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgtt 156  Q
    |||| ||||||||||||||| ||  | |||||||| |||||||||||||||||||||||||    
T  12845130 tactccctccgtcccttaatataaccccccattgcatttttcacatttcttaagaaatgtt 12845070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 363
Target Start/End: Original strand, 24415154 - 24415208
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgga 363  Q
    |||| ||||||||||| |||||||| ||| ||||||||||||||| |||||||||    
T  24415154 atctagtaatttaaaaggggatttatatttaaggataaaaataaagtcaaatgga 24415208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 361
Target Start/End: Original strand, 44395709 - 44395755
Alignment:
Q  315 taatttaaaaagggatttacattgaaggataaaaataaaatcaaatg 361  Q
    |||||||||||| |||||| ||| |||||||||||||||||||||||    
T  44395709 taatttaaaaagagatttatatttaaggataaaaataaaatcaaatg 44395755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 40205652 - 40205587
Alignment:
Q  183 tgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgactttt 248  Q
    ||||| |||||||||| | |||||| | |||||||||||||||| |||| || |||||||||||||    
T  40205652 tgtctattttgtgtgtgaatattactagattgtcctttgtttgtttgtgaatcaaatttgactttt 40205587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 306 - 362
Target Start/End: Complemental strand, 5321963 - 5321907
Alignment:
Q  306 tgtatcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    ||||||| ||||||| ||||||| |||||||| | ||| ||||||||||||||||||    
T  5321963 tgtatctagtaatttgaaaaggggtttacatttagggacaaaaataaaatcaaatgg 5321907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 9684796 - 9684748
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtccttt 220  Q
    ||||||||| |||||||||||||| |||| |||||| ||||||||||||    
T  9684796 tgtaattaatgtgtctgttttgtgcgttaatattacaaaattgtccttt 9684748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 306 - 362
Target Start/End: Original strand, 25063374 - 25063430
Alignment:
Q  306 tgtatcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    ||||||| ||||||| ||||||  |||||||| ||||| ||||||||||||||||||    
T  25063374 tgtatctagtaatttgaaaaggagtttacatttaaggacaaaaataaaatcaaatgg 25063430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 231 - 294
Target Start/End: Original strand, 6282688 - 6282750
Alignment:
Q  231 gtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttag 294  Q
    ||||||||||||| |||||| |||| || ||||| |||||||||||||||| |||| |||||||    
T  6282688 gtattaaatttgatttttcatattttaa-gacaaattagtaatattaattaggagtctgtttag 6282750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 309 - 392
Target Start/End: Complemental strand, 15512719 - 15512636
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatgactacattaagggacggagcgagtata 392  Q
    |||| ||||||| ||||||  |||||||| | ||| |||||||||||||||||| ||  |||||  |||||||||| |||||||    
T  15512719 atctagtaatttgaaaaggagtttacatttagggacaaaaataaaatcaaatgggtgcttacatatagggacggagggagtata 15512636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 309 - 392
Target Start/End: Complemental strand, 28948902 - 28948819
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatgactacattaagggacggagcgagtata 392  Q
    |||| ||||||| ||||||  |||||||| | ||| |||||||||||||||||| ||  |||||  |||||||||| |||||||    
T  28948902 atctagtaatttgaaaaggagtttacatttagggacaaaaataaaatcaaatgggtgcttacatatagggacggagggagtata 28948819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 32715567 - 32715629
Alignment:
Q  195 gtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||||| |||||| ||||| | ||||||| |||||||||||||||||||||||| | |||||||    
T  32715567 gtgttaatattacgaaattatactttgtt-gtatgtgtattaaatttgactttttatatttcaa 32715629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 281
Target Start/End: Complemental strand, 40613007 - 40612929
Alignment:
Q  202 tattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    |||||| ||||| | ||||||||  ||||||||| |||||||||||||| ||||| || | ||||||||| |||||||||    
T  40613007 tattactaaattattctttgtttaaatgtgtatttaatttgacttttcatatttc-attataagttagtagtattaatta 40612929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 9293852 - 9293901
Alignment:
Q  312 ttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    |||||||||||||| || |||||||| ||||| ||||||||||||||||||    
T  9293852 ttgtaatttaaaaaagg-tttacatttaaggacaaaaataaaatcaaatgg 9293901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 315 - 365
Target Start/End: Complemental strand, 9684648 - 9684598
Alignment:
Q  315 taatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatg 365  Q
    |||||||||||||| |||||||| ||  | |||||||||||||||||||||    
T  9684648 taatttaaaaaggggtttacatttaataacaaaaataaaatcaaatggatg 9684598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 390
Target Start/End: Complemental strand, 12844078 - 12844000
Alignment:
Q  312 ttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatgactacattaagggacggagcgagta 390  Q
    ||||||||||||||||| |||||||| | ||| |||||||||| |||| || ||  |||||  |||||||||| |||||    
T  12844078 ttgtaatttaaaaaggggtttacatttagggacaaaaataaaaacaaaagggtggttacatatagggacggagggagta 12844000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 44258000 - 44258049
Alignment:
Q  312 ttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    |||||||||||||| || |||||||| ||||| ||||||||||||||||||    
T  44258000 ttgtaatttaaaaaagg-tttacatttaaggacaaaaataaaatcaaatgg 44258049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 362
Target Start/End: Complemental strand, 5085027 - 5084974
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    |||| ||||||| ||||||| |||||||| | ||| ||||||||||||||||||    
T  5085027 atctagtaatttgaaaaggggtttacatttagggacaaaaataaaatcaaatgg 5084974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 6282502 - 6282563
Alignment:
Q  175 aattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtatta 236  Q
    |||||| |||||| |||| ||||||| |||||  |||||||||||||||| ||| |||||||    
T  6282502 aattaatgtgtctattttatgtgttaatattataaaattgtcctttgtttatatatgtatta 6282563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 268
Target Start/End: Complemental strand, 23393590 - 23393498
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagtta 268  Q
    ||||||||| || ||| |||||||| ||| | |||  |||||||| ||||||||||||||||||  |||||||| |||| ||||||| |||||||||    
T  23393590 tgtaattaatgtatctattttgtgtattaat-ttattaaattgtcatttgtttgtatgtgtatt--atttgactattcatatttcaa-gacaagtta 23393498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 6e-48; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 1763837 - 1763961
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1763837 agtgtaattaatgtgtctgttttgtgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa-gacaagttag 1763935  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||||||||||| |||||||||||    
T  1763936 tagtattaattaagggtatgtttagg 1763961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 95 - 281
Target Start/End: Original strand, 5895690 - 5895865
Alignment:
Q  95 ttacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgt 194  Q
    ||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||| ||| | |||||||||||           |||||||||||||    
T  5895690 ttactccctccgtcccttaatgtaggcatccattgtctttttcacatttcttaagaaaagttgttaatgtaattaat----------gtgtctgttttgt 5895779  T
Q  195 gtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    || ||| |||||| |||||||||||| ||| |||||||||||||||| |||||||| ||||||| |||||| ||||  |||||||||    
T  5895780 gtattaatattacgaaattgtcctttatttttatgtgtattaaatttaacttttcatatttcaa-gacaagatagtggtattaatta 5895865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 31945994 - 31945870
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||||| |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| || ||||||| ||||||||||    
T  31945994 agtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcgtttgtttatatgtgtattaaatttgactttacatatttcaa-gacaagttag 31945896  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||||||||| |  ||||||||||    
T  31945895 tagtattaattagggatatgtttagg 31945870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 30466049 - 30465926
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagt 270  Q
    ||||||||||  ||| |||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||| ||||||| || ||||||||    
T  30466049 gtgtaattaatatgtttgttttgtgtgttaatattaccaaattatcttttgtttgtatgtgtattaaatttgacttttcatatttcaa-gataagttagt 30465951  T
Q  271 aatattaattaagagtatgtttagg 295  Q
    | ||||||||||| | |||||||||    
T  30465950 agtattaattaaggggatgtttagg 30465926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 12514667 - 12514540
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| |||||| |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  12514667 agtgcaattaatgtgtctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaagttag 12514569  T
Q  270 ---taatattaattaagagtatgtttagg 295  Q
       || ||||||||| | |||||||||||    
T  12514568 tgctattattaattaggggtatgtttagg 12514540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 22410925 - 22410800
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||||||||||| | ||||| ||||||||||||||| ||| ||||||||||||||||||||||| ||||||||| ||| ||||| | ||    
T  22410925 agtgtaattaatgtgtctgttttttatgttaatattaccaaattgtcttttatttgtatgtgtattaaatttgacctttcaaattacaaagacaaataag 22410826  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||||||||||| ||||| |||||    
T  22410825 tagtattaattaagggtatgcttagg 22410800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 182 - 294
Target Start/End: Complemental strand, 34513288 - 34513177
Alignment:
Q  182 gtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    ||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| || ||||||    
T  34513288 gtgtctgttttgtgtgttaatattacgaaattatcctttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaagatagtagtaataatta 34513190  T
Q  282 agagtatgtttag 294  Q
     | ||||||||||    
T  34513189 ggggtatgtttag 34513177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 11302883 - 11303001
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaat 273  Q
    ||||||| ||||||||||| ||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||  ||||| |    
T  11302883 taattaatgtgtctgttttttgtgttaatattacaaaattgtcctttgtttgcatgtgtattaaatttgacttttcacatttcaa-gacaaaatagtagt 11302981  T
Q  274 attaattaagagtatgttta 293  Q
    |||||||| | |||||||||    
T  11302982 attaattaggggtatgttta 11303001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 171 - 281
Target Start/End: Original strand, 15981819 - 15981928
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagt 270  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||| || |||||||||||| |||||||| |||||||| ||||||| ||||||||| |    
T  15981819 gtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcattagtttgtatgtgtcttaaatttaacttttcatatttcaa-gacaagttaat 15981917  T
Q  271 aatattaatta 281  Q
    | |||||||||    
T  15981918 agtattaatta 15981928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 9461318 - 9461440
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagt 270  Q
    |||||||||| |||| |||||| ||||||| |||||| ||||| | |||||||||||||||||||||||||||||||||| ||||||| |||| ||||||    
T  9461318 gtgtaattaatgtgtttgttttatgtgttaatattactaaattattctttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaggttagt 9461416  T
Q  271 aatattaattaagagtatgtttag 294  Q
    |  |||||||| | ||||||||||    
T  9461417 agaattaattatgggtatgtttag 9461440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 174 - 268
Target Start/End: Original strand, 16327151 - 16327244
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagtta 268  Q
    ||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||| |||||||| ||||||| |||||||||    
T  16327151 taattaatgtgtctgttttgtgtgttaatattaccaaattgtcatttgtttgtatttgtattaaatttaacttttcatatttcaa-gacaagtta 16327244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 170 - 268
Target Start/End: Original strand, 16350545 - 16350642
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagtta 268  Q
    ||||||||||| | ||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||| |||||||| ||||||| |||||||||    
T  16350545 agtgtaattaatgagtctgttttgtgtgttaatattaccaaattgtcatttgtttgtatttgtattaaatttaacttttcatatttcaa-gacaagtta 16350642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 175 - 295
Target Start/End: Original strand, 33607384 - 33607503
Alignment:
Q  175 aattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaata 274  Q
    |||||| |||||| ||| |||||||| ||||| |||||| |||||||||||||||||| ||||||||||||||||| ||||| |||| ||||||| | ||    
T  33607384 aattaatgtgtctatttagtgtgttaatattatcaaattatcctttgtttgtatgtgtgttaaatttgacttttcatatttc-atgataagttagcagta 33607482  T
Q  275 ttaattaagagtatgtttagg 295  Q
    ||||||| | |||||||||||    
T  33607483 ttaattaggggtatgtttagg 33607503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 174 - 295
Target Start/End: Complemental strand, 28238392 - 28238271
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgac-ttttcaaatttcaatgacaagttagtaa 272  Q
    ||||||| |||||| |||||||||||| |||||||| ||| ||| |||||| ||||| ||||||||||||| |||||| ||||||| ||||||||||||     
T  28238392 taattaatgtgtctattttgtgtgttaatattaccatattatccattgtttttatgtttattaaatttgactttttcatatttcaa-gacaagttagtag 28238294  T
Q  273 tattaattaagagtatgtttagg 295  Q
    ||||||||| | |||||||||||    
T  28238293 tattaattaggggtatgtttagg 28238271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 3729485 - 3729569
Alignment:
Q  209 aaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttag 294  Q
    |||||||| |||||||||||||||||||||||| ||||| || ||||||| |||||||||||||||||||||| ||||||||||||    
T  3729485 aaattgtcatttgtttgtatgtgtattaaatttaactttacatatttcaa-gacaagttagtaatattaattaggagtatgtttag 3729569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 19838955 - 19839079
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||| |||| |||||| |||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||   ||||||| || || ||||    
T  19838955 agtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgactttttgtatttcaa-gataaattag 19839053  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    ||  |||||||| | |||||||||||    
T  19839054 taggattaattaggggtatgtttagg 19839079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 187 - 295
Target Start/End: Original strand, 6791417 - 6791524
Alignment:
Q  187 tgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagt 286  Q
    |||||||||||||| |||||  |||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||| || |  |||||| || ||||    
T  6791417 tgttttgtgtgttaatattattaaattgtcatttgtttgtatgtgtattaaatttgactttttaaatttcaa-gacaagataattgtattaactaggagt 6791515  T
Q  287 atgtttagg 295  Q
    |||||||||    
T  6791516 atgtttagg 6791524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 170 - 258
Target Start/End: Complemental strand, 10669356 - 10669268
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||| |||||| |||||| |||||||||||| |||||||||||||| ||||| |||||| ||||||||||||||||||||| |||||||    
T  10669356 agtgcaattaatgtgtctattttgtgtgttaatattaccaaattgttctttgattgtatctgtattaaatttgacttttcatatttcaa 10669268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 96 - 258
Target Start/End: Complemental strand, 5084687 - 5084532
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||||||||||| | ||||| |||||| | |||| | |||||||||||||||||||| ||| | | |||||||||      | || |||| |||||||||    
T  5084687 tacttcctccgtactttaatataggcatctattgtccttttcacatttcttaagaaaagttgttagtgtaattaa------taaatgtgtttgttttgtg 5084594  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    ||||| ||||| |||||||||||||||||||||||||| |||| ||||||||| | |||||||    
T  5084593 tgttaatattatcaaattgtcctttgtttgtatgtgta-taaagttgactttttatatttcaa 5084532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 3729414 - 3729484
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaattt 241  Q
    |||||||||| |||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  3729414 gtgtaattaatgtgtctattttgtgtgttaatattaccaaattgttctttgtttgtatgtgtattaaattt 3729484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 101 - 295
Target Start/End: Original strand, 16186538 - 16186717
Alignment:
Q  101 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgtta 200  Q
    ||||| ||||||||||||| ||||||||  |||||||||||||  ||||||| |||         |||| |||||||||| ||||||||||||| |||||    
T  16186538 cctccatcccttaatgtagccacccattatctttttcacattttgtaagaaaagtt---------atta-gtgtaattaatgtgtctgttttgtatgtta 16186627  T
Q  201 gtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
     | |||| ||||||||| ||||||||||||  |||||||||||||||||| ||||||| |||||| ||||  |||||||| || |||||||||||    
T  16186628 at-ttacgaaattgtcccttgtttgtatgt--attaaatttgacttttcatatttcaa-gacaagatagtggtattaatt-agtgtatgtttagg 16186717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 174 - 281
Target Start/End: Complemental strand, 197529 - 197423
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaat 273  Q
    ||||||| |||| |||||||||||| | |||||  |||||||| |||||||||||||||||||||||| | ||||  ||||| || |||||||||||| |    
T  197529 taattaatgtgtttgttttgtgtgtcaatattattaaattgtcatttgtttgtatgtgtattaaatttaattttttcaattttaa-gacaagttagtagt 197431  T
Q  274 attaatta 281  Q
    ||||||||    
T  197430 attaatta 197423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 177 - 295
Target Start/End: Complemental strand, 3888017 - 3887900
Alignment:
Q  177 ttaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgactttt-caaatttcaatgacaagttagtaatat 275  Q
    |||| |||||| |||||||||||| |||||| |||||||| | |||||  ||||||||||||||||| |||| || ||||||| |||||||||||| |||    
T  3888017 ttaatgtgtctattttgtgtgttaatattac-aaattgtcttatgtttacatgtgtattaaatttgattttttcatatttcaa-gacaagttagtagtat 3887920  T
Q  276 taattaagagtatgtttagg 295  Q
    |||||| | |||||||||||    
T  3887919 taattaggggtatgtttagg 3887900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 174 - 281
Target Start/End: Complemental strand, 31153066 - 31152960
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaat 273  Q
    ||||||| |||||| |||| | ||| | |||||| |||||||  ||||||||||||||||||||||||||||||||| |||| ||  |||||||| ||||    
T  31153066 taattaatgtgtctattttatatgtcaatattactaaattgttatttgtttgtatgtgtattaaatttgacttttcatattttaa-aacaagttaataat 31152968  T
Q  274 attaatta 281  Q
    ||||||||    
T  31152967 attaatta 31152960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 31536036 - 31536146
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||||||||  | ||| |||| | ||||| ||||| |||||| || ||||||| ||||||||||||||||||||||||| ||||||| || |||||||    
T  31536036 agtgtaattaatatatctattttatttgttaatattatcaaattatcttttgtttatatgtgtattaaatttgacttttcatatttcaa-gataagttag 31536134  T
Q  270 taatattaatta 281  Q
    || |||||||||    
T  31536135 tagtattaatta 31536146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 175 - 295
Target Start/End: Original strand, 31780153 - 31780273
Alignment:
Q  175 aattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgac-ttttcaaatttcaatgacaagttagtaat 273  Q
    |||||| |||||| |||||| ||||  |||||| |||||||||||||||||| |||||||||||||| || ||||||  |||||| ||||||||| || |    
T  31780153 aattaatgtgtctattttgtatgttgatattactaaattgtcctttgtttgtttgtgtattaaatttcactttttcatttttcaa-gacaagttaatagt 31780251  T
Q  274 attaattaagagtatgtttagg 295  Q
    |||||| | | |||||||||||    
T  31780252 attaataaggggtatgtttagg 31780273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 175 - 295
Target Start/End: Original strand, 5457216 - 5457335
Alignment:
Q  175 aattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaata 274  Q
    |||||| || |||||||| |  |||| ||||| |||||||| |||||||||||  |||||||||||||| |||| |||||||||  ||||||||||| ||    
T  5457216 aattaatgtatctgttttatacgttaatattatcaaattgttctttgtttgtaaatgtattaaatttgattttttaaatttcaa-aacaagttagtagta 5457314  T
Q  275 ttaattaagagtatgtttagg 295  Q
    |||||||   |||||||||||    
T  5457315 ttaattagaggtatgtttagg 5457335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 209 - 277
Target Start/End: Complemental strand, 12503656 - 12503589
Alignment:
Q  209 aaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatatta 277  Q
    |||||||| |||||||||||||||| |||||||||||||||| ||||||| |||||||||||| |||||    
T  12503656 aaattgtcttttgtttgtatgtgtagtaaatttgacttttcatatttcaa-gacaagttagtactatta 12503589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 230 - 295
Target Start/End: Original strand, 30248946 - 30249010
Alignment:
Q  230 tgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||||||||||||||||||| ||||||| |||||||||||| ||||||||| | |||||||||||    
T  30248946 tgtattaaatttgacttttcatatttcaa-gacaagttagtagtattaattaggggtatgtttagg 30249010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 205 - 258
Target Start/End: Complemental strand, 31487111 - 31487058
Alignment:
Q  205 taccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||||||||||| |||||||||||||||||||| |||||||||||| |||||||    
T  31487111 taccaaattgtcttttgtttgtatgtgtattaagtttgacttttcatatttcaa 31487058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 9428195 - 9428279
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    ||||||| || ||| |||||||||||| ||||| |||||| || ||||||||||||| |||| ||||| |||||||| |||||||    
T  9428195 taattaatgtatctattttgtgtgttaatattatcaaattatcatttgtttgtatgtatattgaattttacttttcatatttcaa 9428279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 20523016 - 20523093
Alignment:
Q  190 tttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagtta 268  Q
    ||||||||| | |||||||||||| |   ||||||||||||||||||||||||| |||||| ||||||| |||||||||    
T  20523016 tttgtgtgtcaatattaccaaattatttcttgtttgtatgtgtattaaatttgatttttcatatttcaa-gacaagtta 20523093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 255
Target Start/End: Complemental strand, 12514832 - 12514752
Alignment:
Q  175 aattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaattt 255  Q
    |||||| |||||  |||||| ||||| |||||||||||| || ||||||| |||||||||||||| |||| ||||| ||||    
T  12514832 aattaatgtgtccattttgtatgttaatattaccaaattatcatttgtttatatgtgtattaaatatgacctttcatattt 12514752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 294
Target Start/End: Original strand, 31039218 - 31039293
Alignment:
Q  218 tttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttag 294  Q
    |||||||||||||| ||| |||||||||||||| ||||||| |||||||||||| |||| |||| | |||| |||||    
T  31039218 tttgtttgtatgtgcatttaatttgacttttcatatttcaa-gacaagttagtagtattgattaggggtatctttag 31039293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 1514291 - 1514233
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttt 247  Q
    |||||| ||||| |||||||||||| ||  |||||| ||||||||||||||||||||||    
T  1514291 ttttgtatgttaatattaccaaattatcaattgtttatatgtgtattaaatttgacttt 1514233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 4250740 - 4250690
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtccttt 220  Q
    ||||||||||| ||||||||||||||||||| |||||| || |||||||||    
T  4250740 agtgtaattaatgtgtctgttttgtgtgttaatattacgaagttgtccttt 4250690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 294
Target Start/End: Original strand, 9941080 - 9941169
Alignment:
Q  204 ttaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttag 294  Q
    |||| ||| ||| ||||||||| | ||||||| |||||||||||||| |||| || ||||||||| || ||||||||||  ||||||||||    
T  9941080 ttactaaactgttctttgtttgcaagtgtatttaatttgacttttcatattt-aaagacaagttaatagtattaattaaaggtatgtttag 9941169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 317 - 390
Target Start/End: Complemental strand, 22410774 - 22410701
Alignment:
Q  317 atttaaaaagggatttacattgaaggataaaaataaaatcaaatggatgactacattaagggacggagcgagta 390  Q
    |||| |||| ||||||||||| | ||| |||||||||||||||||| || |||||||||| ||| ||| |||||    
T  22410774 atttgaaaaaggatttacatttagggacaaaaataaaatcaaatgggtggctacattaagagacagagggagta 22410701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 6418958 - 6419014
Alignment:
Q  202 tattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    ||||| |||||| | |||||||||||| ||||||| ||||||||||||| |||||||    
T  6418958 tattatcaaatttttctttgtttgtatttgtattacatttgacttttcatatttcaa 6419014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 30248593 - 30248645
Alignment:
Q  176 attaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtat 228  Q
    ||||| |||| |||||||||||||| ||||||||||||| | |||||||||||    
T  30248593 attaatgtgtttgttttgtgtgttaatattaccaaattggcatttgtttgtat 30248645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 309 - 391
Target Start/End: Original strand, 19839097 - 19839179
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatgactacattaagggacggagcgagtat 391  Q
    |||| ||||||| ||||||  |||||||| | ||| |||||||||||||||||| ||  |||||  |||||||||| ||||||    
T  19839097 atctagtaatttgaaaaggagtttacatttagggacaaaaataaaatcaaatgggtgcttacatatagggacggagggagtat 19839179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 24068070 - 24068021
Alignment:
Q  312 ttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    |||||||||||||| || |||||||| ||||| ||||||||||||||||||    
T  24068070 ttgtaatttaaaaaagg-tttacatttaaggacaaaaataaaatcaaatgg 24068021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 5876990 - 5876957
Alignment:
Q  217 ctttgtttgtatgtgtattaaatttgacttttca 250  Q
    |||||||||||||||| |||||||||||||||||    
T  5876990 ctttgtttgtatgtgtgttaaatttgacttttca 5876957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 11082152 - 11082195
Alignment:
Q  227 atgtgtattaaatttgacttttcaaatttcaatgacaagttagta 271  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||    
T  11082152 atgtgtattaaatttgaattttcatatttcaa-gacaagttagta 11082195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 307 - 347
Target Start/End: Complemental strand, 31481918 - 31481878
Alignment:
Q  307 gtatcttgtaatttaaaaagggatttacattgaaggataaa 347  Q
    |||||| |||||||||||| ||||||||||| |||||||||    
T  31481918 gtatctagtaatttaaaaaaggatttacatttaaggataaa 31481878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 4e-46; HSPs: 74)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 96 - 293
Target Start/End: Original strand, 10933966 - 10934152
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| ||||||| ||||||||||||||   |||||||||||||||||| || ||||||||| |||          |||||||||| |||||||||||||     
T  10933966 tactccctccgttccttaatgtaggcatttattgcctttttcacattttttcagaaatgttgtca----------gtgtaattaatgtgtctgttttgta 10934055  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgttta 293  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||    
T  10934056 tgttaatattaccaaattattctttgtttgtatgtgtattaaatttgacttttcatatttcaat-acaagttagtaatattaattaagaatatgttta 10934152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 96 - 295
Target Start/End: Original strand, 5845136 - 5845324
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    ||||||||||||| ||| ||||||||| ||||||||||||||| |||||||||||| |||| |||          |||||||||| || | |||||||||    
T  5845136 tacttcctccgtctcttgatgtaggcatccattgcctttttcatatttcttaagaattgttgtca----------gtgtaattaatgtatttgttttgtg 5845225  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    | ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||| |||||||||||||    
T  5845226 tattaatattatcaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaat-acaagttagtagtattaattaggagtatgtttagg 5845324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 96 - 295
Target Start/End: Complemental strand, 21575024 - 21574837
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||          || |||||| |||| |||||| ||||||     
T  21575024 tactccctccgtcccttaatgtaggcacccattgtctttttcacatttcttaagaaatgtt----------tttagtgtacttaatgtgtctattttgta 21574935  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||  |||||| |||||||| ||| ||||||||| | |||||||||||    
T  21574934 tgttaatattaccaaattgtcctttgtttgta-gtgtattaaatttgtcttttcatgtttcaa-gacaagtttgtagtattaattaggggtatgtttagg 21574837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 96 - 295
Target Start/End: Complemental strand, 25017818 - 25017630
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| ||||||||||||||||||| ||| ||||| ||||||||| |||||||||||||||| |||          || ||||||| ||||||||||||||    
T  25017818 tactccctccgtcccttaatgtagacactcattgtctttttcacgtttcttaagaaatgttgtca----------gtataattaatgtgtctgttttgtg 25017729  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || ||||||||| || ||||||||| | |||| ||||||    
T  25017728 tgttaatattaccaaattgtcatttgtttgtatgtgtattaaatttgacttttcatattttaa-gacaagttaatagtattaattaggggtatatttagg 25017630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 15898543 - 15898419
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||    
T  15898543 agtgtaattaatgtgtctgttttgtgtgttaatattatcaaattgtcctttgtttgtatgtgtattaaatttggcctttcaaatttcaa-gacaagttag 15898445  T
Q  270 taatattaattaagagtatgtttagg 295  Q
     | |||||||||| ||||||||||||    
T  15898444 cagtattaattaaaagtatgtttagg 15898419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 174 - 295
Target Start/End: Original strand, 27587866 - 27587986
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaat 273  Q
    ||||||| ||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||| |    
T  27587866 taattaatgtgtctgttttgtgtgttaatattactaaattgtcctttgtatgtatgtgtattaaatttgatttttcaaatttcaat-acaagttagtagt 27587964  T
Q  274 attaattaagagtatgtttagg 295  Q
    |||| |||||||||||||||||    
T  27587965 attatttaagagtatgtttagg 27587986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 96 - 295
Target Start/End: Original strand, 34877626 - 34877814
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| ||||||||| ||||||||| ||  |||||||||||||||||||||||||||||||| |||          ||||||||||  |||||||||||||    
T  34877626 tactccctccgtcctttaatgtagacattcattgcctttttcacatttcttaagaaatgttgtca----------gtgtaattaatttgtctgttttgtg 34877715  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| |||||||||||| || ||||||||| |||||||||||||||||||||||  |||||| |||||||| ||| ||||||||| |||||| ||||||    
T  34877716 tgttaatattaccaaattatcatttgtttgtgtgtgtattaaatttgacttttcatttttcaa-gacaagtttgtagtattaattaggagtatatttagg 34877814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 174 - 295
Target Start/End: Complemental strand, 3559103 - 3558983
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaat 273  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||| |    
T  3559103 taattaatgtgtctattttgtgtgttaatattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaa-gataagttagtagt 3559005  T
Q  274 attaattaagagtatgtttagg 295  Q
    ||| |||||| |||||||||||    
T  3559004 atttattaagggtatgtttagg 3558983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 29866213 - 29866337
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| ||||||  ||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  29866213 agtgcaattaatatgtcttttttgtgtgttaatattaccaagttgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaagttag 29866311  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||||||||| | |||||||||||    
T  29866312 tagtattaattaggggtatgtttagg 29866337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 96 - 295
Target Start/End: Original strand, 4738590 - 4738778
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| ||||| |||||||||| | ||| |||||| ||||||||||||||||||||||| || |||          |||||||||| || | |||||||||    
T  4738590 tactccctccatcccttaatgcatgcatccattgtctttttcacatttcttaagaaatattgtca----------gtgtaattaatgtatttgttttgtg 4738679  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| |||||| |||||| ||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||| ||||| ||| | |||||||||||    
T  4738680 tgttaatattactaaattgacctttgtttttatgtgtattaaatttgacttttcatatttcaa-gacaagttagtagtattagttaggggtatgtttagg 4738778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 96 - 295
Target Start/End: Original strand, 36177252 - 36177440
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| ||||| |||||||||||||||| | |||| |||||| ||||||||||||||| ||| |||          |||||||||| |||||| |||||||    
T  36177252 tactccctccatcccttaatgtaggcatctattgtcttttttacatttcttaagaaaagttatca----------gtgtaattaatgtgtctattttgtg 36177341  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| |||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||  ||||   |||| ||||||||||| |||||||||||    
T  36177342 tgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaa-aacaaaaaagtagtattaattaagggtatgtttagg 36177440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 96 - 295
Target Start/End: Complemental strand, 3247418 - 3247230
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| ||||||| |||||| ||||  ||||||||||||||||||||||||||||||| |||  ||          ||||||||||  ||||||||||||     
T  3247418 tactccctccgttccttaacgtagatacccattgcctttttcacatttcttaagaaaagttgaca----------gtgtaattaatatgtctgttttgta 3247329  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| || ||| | ||| ||||||||| | |||| ||||||    
T  3247328 tgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaa-gaaaagattgtagtattaattaggggtatatttagg 3247230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 10523354 - 10523231
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||  ||||||| |||||||||||||||||||| || | ||||||| ||||||||||    
T  10523354 agtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgttttttgtttttatgtgtattaaatttgactatttatatttcaa-gacaagttag 10523256  T
Q  270 taatattaattaagagtatgtttag 294  Q
    || ||||||||| | ||||||||||    
T  10523255 tagtattaattaggggtatgtttag 10523231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 170 - 294
Target Start/End: Original strand, 20946111 - 20946234
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| |||||| |||||| |||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||  |||||||||    
T  20946111 agtgcaattaacgtgtctattttgtgtgttaatattatcaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaa-aacaagttag 20946209  T
Q  270 taatattaattaagagtatgtttag 294  Q
    || || |||||| ||||||||||||    
T  20946210 tagtactaattaggagtatgtttag 20946234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 96 - 293
Target Start/End: Complemental strand, 4857642 - 4857452
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||||| |||||||||  |||||  | || ||||| ||||||||||||||||| ||| ||| | | |||||||||      |||| |||||| |||| ||    
T  4857642 tacttcatccgtccctgtatgtaaacccctattgcttttttcacatttcttaataaaagttgttagtgtaattaa------ttaatgtgtctattttatg 4857549  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgttta 293  Q
    ||||| |||||| |||||||| ||||||||||||||||||||||||||||||||| |||| || || ||||||||| ||||||||| |||||||||||    
T  4857548 tgttaatattactaaattgtcatttgtttgtatgtgtattaaatttgacttttcatattttaa-gataagttagtagtattaattaggagtatgttta 4857452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 12895288 - 12895165
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagt 270  Q
    |||||||||| ||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||| |||| |||||| || |||||||||||    
T  12895288 gtgtaattaatgtgtctgttttgtgtattaatattaccaaattgtcttttgtttgtatgtgtattaaatttgattttttaaattttaa-gacaagttagt 12895190  T
Q  271 aatattaattaagagtatgtttagg 295  Q
      |||||||||   |||||||||||    
T  12895189 tgtattaattagaggtatgtttagg 12895165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 38972181 - 38972083
Alignment:
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| || ||||||||| ||||||||||| |||||||||||    
T  38972181 tgttaatattaccaaattgtcctttgtttgtatgtgtattaaatttgactttttatatttcaa-gataagttagtagtattaattaagggtatgtttagg 38972083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 96 - 281
Target Start/End: Original strand, 27798116 - 27798290
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtg 195  Q
    |||| |||||||||||||||| ||||| ||||||  |||||||||||| ||||||||| || |||          ||||||||||  |||||||||||||    
T  27798116 tactccctccgtcccttaatgcaggcatccattgtatttttcacattttttaagaaatattgtca----------gtgtaattaatttgtctgttttgtg 27798205  T
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    ||||| ||||| |||||| || |||||||||||||||||||| |||||||||||| ||||||| ||||||||| |  |||||||||    
T  27798206 tgttaatattatcaaattatcatttgtttgtatgtgtattaagtttgacttttcatatttcaa-gacaagttattggtattaatta 27798290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 190 - 362
Target Start/End: Original strand, 30317793 - 30317963
Alignment:
Q  190 tttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatg 289  Q
    ||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||| |||||||| || |||||    
T  30317793 tttgtgtgttaatattaccaaattttcctttgtttgtgtgtgtattaaatttgacttttcatatttcaatg-caagttagtagtattaatt-agggtatg 30317890  T
Q  290 tttaggnnnnnnnnnntgtatcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    || | |          |||||||  |||||| |||||||| ||||||| | ||||||||| ||||||||||||    
T  30317891 ttaatgaaaaaaaaaatgtatctaataatttgaaaagggacttacatttagggataaaaagaaaatcaaatgg 30317963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 177 - 362
Target Start/End: Complemental strand, 30348150 - 30347968
Alignment:
Q  177 ttaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatatt 276  Q
    |||| |||||| |||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||| | |||||||||| ||||    
T  30348150 ttaatgtgtctattttgtgtgttaatattaccaaattttcctttgtttgtgtgtgtattaaatttgacttttcatatttcaa-ggcaagttagtagtatt 30348052  T
Q  277 aattaagagtatgtttaggnnnnnnnnnntgtatcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    |||| || ||||||||| |          |||||||  |||||| |||||||| ||||||| | ||||||||| ||||||||||||    
T  30348051 aatt-agggtatgtttatg-aaaaaaaaatgtatctaataatttgaaaagggacttacatttagggataaaaagaaaatcaaatgg 30347968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 110 - 295
Target Start/End: Complemental strand, 40979342 - 40979168
Alignment:
Q  110 cttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgttagtattacca 209  Q
    ||||||||||||| |||||| |||||||| ||||||||| ||| ||| ||||           ||||||||  ||| |||||||||| ||| |||||| |    
T  40979342 cttaatgtaggcatccattgtctttttcatatttcttaataaaagttgtcaa----------ggtaattaacatgtatgttttgtgtattaatattacga 40979253  T
Q  210 aattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| || |||||| ||||| ||||||||| | |||||||||||    
T  40979252 aattgtcctttgtttgtatgtgtattaaatttgacttttcatattt-aaagacaagatagtagtattaattaggggtatgtttagg 40979168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 35569085 - 35568961
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||||||||||| ||| ||| |||||| ||||| | |||||||||||||||||||||||||||||||||| ||||||| ||||| ||||    
T  35569085 agtgtaattaatgtgtctgttttatgtattaatattactaaattattctttgtttgtatgtgtattaaatttgacttttcatatttcaa-gacaaattag 35568987  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || || |||||| | |||||||||||    
T  35568986 tagtactaattaggggtatgtttagg 35568961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 36347681 - 36347557
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| || |||||||||||| ||| ||||| |||||||   |||||||||||||||||||||||||||| |||| ||||||| ||||||||||    
T  36347681 agtgtaattaatgtatctgttttgtgtattaatattatcaaattgatttttgtttgtatgtgtattaaatttgactattcacatttcaa-gacaagttag 36347583  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    |||||||||||| |  ||||||||||    
T  36347582 taatattaattagggatatgtttagg 36347557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 39690566 - 39690442
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||| |||| |||||| |||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||   ||||||| ||||| ||||    
T  39690566 agtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgactttttgtatttcaa-gacaaattag 39690468  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    ||  |||||||| | |||||||||||    
T  39690467 taggattaattaggggtatgtttagg 39690442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 170 - 294
Target Start/End: Original strand, 600789 - 600912
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| |||||| |||||| || ||||||||| ||||| ||||||||| ||||||||||| |||||||||||||| |||| | |||| || ||||||||||    
T  600789 agtgcaattaatgtgtctattatgtgtgttaatattatcaaattgtcatttgtttgtatatgtattaaatttgattttttatattttaa-gacaagttag 600887  T
Q  270 taatattaattaagagtatgtttag 294  Q
    |||||||||||| || |||||||||    
T  600888 taatattaattaggattatgtttag 600912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 183 - 295
Target Start/End: Complemental strand, 5151267 - 5151157
Alignment:
Q  183 tgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaa 282  Q
    ||||| |||||||| ||| ||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||| |||||||||||| || ||||| |    
T  5151267 tgtcttttttgtgtattaatattaccaaattgtcctttatttgtgtgtgtattaaatttgacttttcatatttcaa-gacaagttagtagtactaatt-a 5151170  T
Q  283 gagtatgtttagg 295  Q
    | |||||||||||    
T  5151169 gggtatgtttagg 5151157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 101 - 250
Target Start/End: Complemental strand, 3631257 - 3631120
Alignment:
Q  101 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgttctcaatgtaattaagtgtaattaaggtgtctgttttgtgtgtta 200  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||| |||  || ||           |||||||||| ||||| |||||||||||||    
T  3631257 cctccgtcccttaatgtaggcatccattgtctttttcacatttcttaaaaaaa-ttgtc-----------gtgtaattaatgtgtcggttttgtgtgtta 3631170  T
Q  201 gtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttca 250  Q
     ||||||  ||||| |||||||||||||||||||||||||||||||||||    
T  3631169 atattacgcaattgacctttgtttgtatgtgtattaaatttgacttttca 3631120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 170 - 280
Target Start/End: Complemental strand, 43060590 - 43060482
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||||| |||||||||||| |||||||| ||| || ||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||    
T  43060590 agtgtaattaatgtgtctattttgtgtgttaatattaccatattatcttttgtttgtatgtgtattaaatttgac-tttcatattccaa-gacaagttag 43060493  T
Q  270 taatattaatt 280  Q
    || ||||||||    
T  43060492 tagtattaatt 43060482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 16195 - 16071
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||| |||||| || ||| |||| ||||| | |||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||    
T  16195 agtgcaattaatgtatctattttttgtgtgaatattactaaattgtcctttgtttgtatttgtattaaatttgacttttcacatttcaa-gacaagttag 16097  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||||||  | | |||||||||||    
T  16096 tagtattaaccaggggtatgtttagg 16071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 42644558 - 42644434
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||  | |||||| || || ||||| ||||||||| ||||||||||||| ||||||||||| ||||||| ||||||| ||||||||||    
T  42644558 agtgtaattaatgtgattattttgtatgctaatattatcaaattgtcatttgtttgtatgtatattaaatttgtcttttcatatttcaa-gacaagttag 42644460  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    |  ||||||||||| |||||||||||    
T  42644459 ttgtattaattaagggtatgtttagg 42644434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 189 - 293
Target Start/End: Complemental strand, 9375700 - 9375597
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtat 288  Q
    ||||||||| || ||||||||||||||| ||||||||||||| |||||||||||| |||||| ||||||| || ||||||||| ||||||| |||| |||    
T  9375700 ttttgtgtgctaatattaccaaattgtcttttgtttgtatgtttattaaatttgatttttcatatttcaa-gataagttagtagtattaatcaagaatat 9375602  T
Q  289 gttta 293  Q
    |||||    
T  9375601 gttta 9375597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 170 - 294
Target Start/End: Original strand, 27642526 - 27642649
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||| |||| |||||| |||| ||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||   ||||||| || || ||||    
T  27642526 agtgtagttaatgtgtctattttatgtgttaatattactaaattatcctttgtttgtatgtgtattaaatttgactttttgtatttcaa-gataaattag 27642624  T
Q  270 taatattaattaagagtatgtttag 294  Q
    ||  |||||||||| ||||||||||    
T  27642625 taggattaattaagggtatgtttag 27642649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 174 - 280
Target Start/End: Original strand, 43454010 - 43454115
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaat 273  Q
    ||||||| ||||| ||||||| ||||| ||||| |||| | || |||||||||||||||||||||||||| |||||||||||||| |||||||||||  |    
T  43454010 taattaatgtgtcagttttgtatgttaatattatcaaactatcttttgtttgtatgtgtattaaatttgatttttcaaatttcaa-gacaagttagtggt 43454108  T
Q  274 attaatt 280  Q
    |||||||    
T  43454109 attaatt 43454115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 174 - 295
Target Start/End: Complemental strand, 9946434 - 9946314
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaat 273  Q
    ||||||| |||||||||||  || ||| |||||| ||||| ||||||||||||| |||||||||||| ||||||| | ||||||| |||||| ||||| |    
T  9946434 taattaatgtgtctgttttacgtattaatattacgaaattatcctttgtttgtacgtgtattaaattcgactttttatatttcaa-gacaagatagtagt 9946336  T
Q  274 attaattaagagtatgtttagg 295  Q
    |||||||| | |||||||||||    
T  9946335 attaattaggggtatgtttagg 9946314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 208 - 295
Target Start/End: Complemental strand, 8718001 - 8717915
Alignment:
Q  208 caaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||||||| ||||||||||| ||||||||||||||||||||| ||||||| |||||||| ||| ||||||||| | |||||||||||    
T  8718001 caaattgtcatttgtttgtatatgtattaaatttgacttttcatatttcaa-gacaagttcgtattattaattaggggtatgtttagg 8717915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 11980740 - 11980850
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||||| |||||||||||| |||||| | ||| |||  ||||| ||||||||||||||||||||||||| |||| || |||| |||||    
T  11980740 agtgtaattaatgtgtctattttgtgtgttaatattactatattatccactgtttatatgtgtattaaatttgacttttcatattttaa-gacatgttag 11980838  T
Q  270 taatattaatta 281  Q
    || |||||||||    
T  11980839 tagtattaatta 11980850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 293
Target Start/End: Original strand, 16496480 - 16496582
Alignment:
Q  190 tttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatg 289  Q
    ||||||| ||| |||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||| || |||||| || ||||| ||||  |||||    
T  16496480 tttgtgtattaatattaccaaattatcctttgtttgtatgtatattaaatttgacttttcatatttcaa-gataagttaatagtattagttaaaggtatg 16496578  T
Q  290 ttta 293  Q
    ||||    
T  16496579 ttta 16496582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 4745151 - 4745229
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgactttt 248  Q
    |||| |||||| |||| | ||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  4745151 agtgcaattaatgtgtttattttgtgggttaatattaccaaattgtcatttgtttgtatgtgtattaaatttgactttt 4745229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 171 - 293
Target Start/End: Complemental strand, 25690768 - 25690644
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtat--taccaaattgtcctttgtttgtatgtgtattaaatttgac-ttttcaaatttcaatgacaagtt 267  Q
    |||||||||| |||| |||||||||||||| |||  |  |||||||||||||||||||||||||||||||||  || |||| ||||||||| ||||||||    
T  25690768 gtgtaattaatgtgtatgttttgtgtgttaatatagttacaaattgtcctttgtttgtatgtgtattaaattcaacttttttaaatttcaa-gacaagtt 25690670  T
Q  268 agtaatattaattaagagtatgttta 293  Q
    |||  ||||||||| | |||||||||    
T  25690669 agttgtattaattaggggtatgttta 25690644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 21912144 - 21912268
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    |||||| |||| |||||| |||| ||||||| |||||  |||||||| |||||||||||||||||||| ||||||||||   ||||||| ||||| ||||    
T  21912144 agtgtagttaatgtgtctattttatgtgttaatattattaaattgtcttttgtttgtatgtgtattaagtttgactttttgtatttcaa-gacaaattag 21912242  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    ||  |||||||| | |||||||||||    
T  21912243 taggattaattaggggtatgtttagg 21912268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 187 - 295
Target Start/End: Complemental strand, 36750839 - 36750732
Alignment:
Q  187 tgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagt 286  Q
    |||||||||||||| |||||  | | |||||||||||| ||||||||||||||||||||||| | |||||||  ||||||||| | ||||||||||| ||    
T  36750839 tgttttgtgtgttaatattattagactgtcctttgtttatatgtgtattaaatttgactttttatatttcaa-aacaagttagcagtattaattaagggt 36750741  T
Q  287 atgtttagg 295  Q
    || ||||||    
T  36750740 atatttagg 36750732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 41521212 - 41521300
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||| ||||||  ||||| |||||||||||| |||||  |||||||| ||||||| ||||||||||||||||||||||||| |||||||    
T  41521212 agtgaaattaatatgtctattttgtgtgttaatattattaaattgtcatttgtttatatgtgtattaaatttgacttttcatatttcaa 41521300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 27925337 - 27925396
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaatgt 155  Q
    |||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  27925337 tactccctccgtccctttatgtaggcacccattgcttttttcacatttcttaagaaatgt 27925396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 196 - 281
Target Start/End: Original strand, 34676171 - 34676255
Alignment:
Q  196 tgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    ||||| |||||||||||| |||||||||||||||||| ||||||||||||| ||| |||||||| | ||||||| | |||||||||    
T  34676171 tgttaatattaccaaattatcctttgtttgtatgtgtgttaaatttgacttatcatatttcaat-ataagttagcagtattaatta 34676255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 203 - 295
Target Start/End: Complemental strand, 32401501 - 32401410
Alignment:
Q  203 attaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||||||| |||| |||||||||||||||||||||||||| |||||| |||| || |||||||| ||| ||||||||| |||| || |||||    
T  32401501 attaccaaaatgtcttttgtttgtatgtgtattaaatttgatttttcatattttaa-gacaagttggtagtattaattaggagtgtgcttagg 32401410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 19281569 - 19281498
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttga 243  Q
    ||||||||| || |||||||||||| ||| |||||| ||||| || ||||||||||||||||||||||||||    
T  19281569 tgtaattaatgtatctgttttgtgtattaatattactaaattatcttttgtttgtatgtgtattaaatttga 19281498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 187 - 268
Target Start/End: Complemental strand, 732016 - 731935
Alignment:
Q  187 tgttttgtgtgttagtattaccaaattgtccttt-gtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagtta 268  Q
    |||||||||||||| ||||| |||||||| |||| ||||||||||||||||||||||  |||||| ||||||| |||||||||    
T  732016 tgttttgtgtgttaatattatcaaattgttcttttgtttgtatgtgtattaaatttgttttttcatatttcaa-gacaagtta 731935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 255
Target Start/End: Complemental strand, 19089081 - 19089016
Alignment:
Q  190 tttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaattt 255  Q
    ||||||| ||| |||||| |||||||| ||||||||||| ||||||||||||||||||||| ||||    
T  19089081 tttgtgtattaatattactaaattgtcatttgtttgtatttgtattaaatttgacttttcatattt 19089016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 207 - 295
Target Start/End: Original strand, 7736041 - 7736128
Alignment:
Q  207 ccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttagg 295  Q
    ||||||| || ||||||||||||||| ||||||||||||||||| ||||||| || ||||||| | ||||||||| |  ||||||||||    
T  7736041 ccaaattatcatttgtttgtatgtgtgttaaatttgacttttcatatttcaa-gataagttagcagtattaattagggatatgtttagg 7736128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 255
Target Start/End: Complemental strand, 24781346 - 24781264
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaattt 255  Q
    ||||||||| |||| | |||||| ||||| ||||| |||||||| |||| |||||||||||||||||||||| |||||| ||||    
T  24781346 tgtaattaatgtgtttattttgtatgttaatattatcaaattgttcttt-tttgtatgtgtattaaatttgatttttcacattt 24781264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 281
Target Start/End: Complemental strand, 5764290 - 5764193
Alignment:
Q  183 tgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    ||||| ||||||||||||  ||||| ||||| ||||||||||  ||  ||||||||||| |||||||| ||||| | ||||||||| ||||||||||||    
T  5764290 tgtctattttgtgtgttaacattactaaattatcctttgtttacataagtattaaatttaacttttcatatttc-acgacaagttaataatattaatta 5764193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 258
Target Start/End: Original strand, 18729613 - 18729704
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtc----ctttgtttgtatgtgtattaaatttgacttttcaaatttcaa 258  Q
    |||||||||| |||||| |||||||||||| |||||  ||| | ||     ||||||||||||||||||||||||||||||||| |||||||    
T  18729613 gtgtaattaatgtgtctattttgtgtgttaatattattaaagtatcatttgtttgtttgtatgtgtattaaatttgacttttcatatttcaa 18729704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 31642548 - 31642484
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtatt 235  Q
    ||||||||||| |||||| |||||||||||| |||||||||| |||| ||||||| ||||||||||    
T  31642548 agtgtaattaatgtgtct-ttttgtgtgttaatattaccaaactgtcttttgtttatatgtgtatt 31642484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 294
Target Start/End: Original strand, 16969402 - 16969521
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaat 273  Q
    ||||||| ||||||  ||||| ||||| ||||| |||| |||  ||| ||||||||||| |||||||||| |||| | |||| || ||||| ||||||||    
T  16969402 taattaatgtgtctaatttgtttgttaatattatcaaactgttatttatttgtatgtgtgttaaatttgaattttaatattttaa-gacaatttagtaat 16969500  T
Q  274 attaattaagagtatgtttag 294  Q
    ||||||||   ||||||||||    
T  16969501 attaattagaggtatgtttag 16969521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 202 - 281
Target Start/End: Original strand, 556057 - 556135
Alignment:
Q  202 tattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    |||||| |||||||| ||| | ||||| ||||||||||||||||||||| ||||||| ||||| ||| | ||||||||||    
T  556057 tattactaaattgtcatttttctgtatatgtattaaatttgacttttcatatttcaa-gacaaattaatgatattaatta 556135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 15967191 - 15967124
Alignment:
Q  171 gtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaa 238  Q
    |||||||||| ||||||||||||||| ||| ||||||||||||  ||||| ||| ||||| |||||||    
T  15967191 gtgtaattaatgtgtctgttttgtgtattaatattaccaaattaccctttatttatatgtttattaaa 15967124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 18032758 - 18032811
Alignment:
Q  306 tgtatcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaa 359  Q
    ||||| ||||||||| ||||||| |||||||| ||||| |||||||||||||||    
T  18032758 tgtatgttgtaatttgaaaagggctttacatttaaggacaaaaataaaatcaaa 18032811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 315 - 363
Target Start/End: Original strand, 34877838 - 34877886
Alignment:
Q  315 taatttaaaaagggatttacattgaaggataaaaataaaatcaaatgga 363  Q
    |||||||||| |||||||||||| | ||| |||||||||||||||||||    
T  34877838 taatttaaaaggggatttacatttatggacaaaaataaaatcaaatgga 34877886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 31641207 - 31641149
Alignment:
Q  235 taaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttag 294  Q
    |||||||||||||||||||||||| || ||||||||  ||||||||| | ||||||||||    
T  31641207 taaatttgacttttcaaatttcaa-gataagttagtggtattaattaggggtatgtttag 31641149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 309 - 392
Target Start/End: Complemental strand, 39690424 - 39690341
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatgactacattaagggacggagcgagtata 392  Q
    |||| ||||||| ||||||  |||||||| | ||| |||||||||||||||||| ||  |||||  |||||||||| |||||||    
T  39690424 atctagtaatttgaaaaggagtttacatttagggacaaaaataaaatcaaatgggtgcttacatatagggacggagggagtata 39690341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 129634 - 129684
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtccttt 220  Q
    ||||||||||| |||||| |||||||| ||| |||||||||||||| ||||    
T  129634 agtgtaattaatgtgtctattttgtgtattaatattaccaaattgttcttt 129684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 7510630 - 7510683
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgttt 224  Q
    ||||||||||| |||| |||||||||||||| ||||||| || ||||||||||||    
T  7510630 agtgtaattaatgtgtatgttttgtgtgttaatattacc-aactgtcctttgttt 7510683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 8760977 - 8760928
Alignment:
Q  312 ttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    |||||||||||||| || |||||||| ||||| ||||||||||||||||||    
T  8760977 ttgtaatttaaaaaagg-tttacatttaaggacaaaaataaaatcaaatgg 8760928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 189 - 295
Target Start/End: Original strand, 10656633 - 10656737
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtat 288  Q
    |||| |||||||  ||||||||||| || ||| |||||||  || ||||||||||||||||| |||||||  | ||||||| | |||||||| || ||||    
T  10656633 ttttatgtgttaaaattaccaaattatcttttttttgtattggtgttaaatttgacttttcatatttcaa-cataagttagcagtattaatt-agggtat 10656730  T
Q  289 gtttagg 295  Q
    |||||||    
T  10656731 gtttagg 10656737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 183 - 281
Target Start/End: Complemental strand, 14044565 - 14044468
Alignment:
Q  183 tgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    ||||| |||| ||| ||| ||||| |||||| || ||| ||| ||||||| ||||||||||||||||| |||| || || ||||||| | |||||||||    
T  14044565 tgtctattttatgtattaatattatcaaattatcatttatttttatgtgtgttaaatttgacttttcatatttgaa-gataagttagcagtattaatta 14044468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 32067864 - 32067906
Alignment:
Q  182 gtgtctgttttgtgtgttagtattaccaaattgtcctttgttt 224  Q
    |||||| |||||||||||| ||||||||||||||| |||||||    
T  32067864 gtgtctattttgtgtgttaatattaccaaattgtcatttgttt 32067906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 230 - 291
Target Start/End: Original strand, 32068070 - 32068131
Alignment:
Q  230 tgtattaaatttgacttttcaaatttcaatgac-aagttagtaatattaattaagagtatgtt 291  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||| |||||| |||| |||||||    
T  32068070 tgtattaaatttgacttttcatatttcaa-gacaaagttagtagtattaagtaagggtatgtt 32068131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 281
Target Start/End: Original strand, 457800 - 457907
Alignment:
Q  175 aattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtg--tattaaatttgacttttcaaatttcaatgacaagttagtaa 272  Q
    |||||| || ||| |||||||| | | |||||  |||||||| ||||||| ||||||  ||||||||||||| ||||| |||| || || ||||| ||||    
T  457800 aattaatgtatctattttgtgtctgaatattattaaattgtcatttgtttatatgtgtgtattaaatttgacatttcatattttaa-gagaagttggtaa 457898  T
Q  273 tattaatta 281  Q
    |||||||||    
T  457899 tattaatta 457907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 245
Target Start/End: Original strand, 3529935 - 3529976
Alignment:
Q  204 ttaccaaattgtcctttgtttgtatgtgtattaaatttgact 245  Q
    |||| ||||||| |||||||| ||||||||||||||||||||    
T  3529935 ttactaaattgttctttgtttatatgtgtattaaatttgact 3529976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 6514354 - 6514306
Alignment:
Q  312 ttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatg 361  Q
    |||||||||||||| || |||||||| ||||| |||||||||||||||||    
T  6514354 ttgtaatttaaaaaagg-tttacatttaaggacaaaaataaaatcaaatg 6514306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 362
Target Start/End: Original strand, 21912286 - 21912339
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    |||||||||||| ||||||  |||||||| | ||| ||||||||||||||||||    
T  21912286 atcttgtaatttgaaaaggagtttacatttagggacaaaaataaaatcaaatgg 21912339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 362
Target Start/End: Original strand, 27925439 - 27925492
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    |||| ||||||| |||||||||||||||| | ||| ||||||||| ||||||||    
T  27925439 atctagtaatttgaaaagggatttacatttagggacaaaaataaagtcaaatgg 27925492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 3631056 - 3631000
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatg 365  Q
    |||| ||||||| |||| |  |||||||| ||| |||||||||||||||||||||||    
T  3631056 atctagtaatttgaaaaagagtttacatttaagaataaaaataaaatcaaatggatg 3631000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 365
Target Start/End: Original strand, 36177459 - 36177515
Alignment:
Q  309 atcttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatggatg 365  Q
    |||| ||||||| |||| | ||||||||| | ||| |||||||||||||||||||||    
T  36177459 atctagtaatttgaaaatgaatttacatttagggacaaaaataaaatcaaatggatg 36177515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1091 (Bit Score: 78; Significance: 5e-36; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 1994 - 1870
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||| ||||| ||||    
T  1994 agtgtaattaatgtgtctattttgtgtgttaatattaccaaattatcctttgtttgtatgtgtattaaatttgacttttcatattgcaa-gacaaattag 1896  T
Q  270 taatattaattaagagtatgtttagg 295  Q
    || ||||||||| | |||||||||||    
T  1895 tagtattaattaggggtatgtttagg 1870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0699 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0699
Description:

Target: scaffold0699; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 172 - 278
Target Start/End: Original strand, 7604 - 7708
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagta 271  Q
    ||||||| |||||||| |||||| ||| |||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||    
T  7604 tgtaattgaggtgtctattttgt-tgtaagtattacaaaattgtcctttgtttatatgtgtattaaatttgacttttcatatttcaa-gacaagttagta 7701  T
Q  272 atattaa 278  Q
    |||||||    
T  7702 atattaa 7708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 182 - 281
Target Start/End: Complemental strand, 99886 - 99788
Alignment:
Q  182 gtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    |||||| |||||||||||| |||||| |||||||| |||||||| |||||||||||||||||||||||| ||||||| |||||||||||| |||||||||    
T  99886 gtgtctattttgtgtgttaatattacgaaattgtcttttgtttgaatgtgtattaaatttgacttttcatatttcaa-gacaagttagtagtattaatta 99788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 61; Significance: 7e-26; HSPs: 3)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 170 - 278
Target Start/End: Original strand, 22084 - 22191
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| |||| |||||||||| ||| |||||||| |||||||||||||||||||| |||||||||| |||||||| |||| || ||||||||||    
T  22084 agtgtaattaatgtgtttgttttgtgtattaatattaccatattgtcctttgtttgtatgtatattaaatttaacttttcatatttgaa-gacaagttag 22182  T
Q  270 taatattaa 278  Q
    || ||||||    
T  22183 tattattaa 22191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 189 - 249
Target Start/End: Original strand, 18732 - 18792
Alignment:
Q  189 ttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttc 249  Q
    ||||||| |||| ||||||||||||||| ||||||| ||||||| ||||||||||||||||    
T  18732 ttttgtgggttaatattaccaaattgtcatttgtttctatgtgttttaaatttgacttttc 18792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 143
Target Start/End: Original strand, 22025 - 22072
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacattt 143  Q
    |||| |||||||||||||||||||||||  |||| |||||||||||||    
T  22025 tactccctccgtcccttaatgtaggcacatattgtctttttcacattt 22072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 170 - 294
Target Start/End: Original strand, 214642 - 214767
Alignment:
Q  170 agtgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttag 269  Q
    ||||||||||| ||||||  ||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | |||| || || |||||||    
T  214642 agtgtaattaatgtgtctagtttttgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaatttgactttttatattttaa-gataagttag 214740  T
Q  270 ta--atattaattaagagtatgtttag 294  Q
    ||  |||||||||| | ||||||||||    
T  214741 tagtatattaattaggggtatgtttag 214767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 174 - 295
Target Start/End: Complemental strand, 38554 - 38433
Alignment:
Q  174 taattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgac-ttttcaaatttcaatgacaagttagtaa 272  Q
    ||||||| |||||| |||||||||||| |||||||| ||| ||| |||||| ||||| ||||||||||||| |||||| ||||||| ||||||||||||     
T  38554 taattaatgtgtctattttgtgtgttaatattaccatattatccattgtttttatgtttattaaatttgactttttcatatttcaa-gacaagttagtag 38456  T
Q  273 tattaattaagagtatgtttagg 295  Q
    ||||||||| | |||||||||||    
T  38455 tattaattaggggtatgtttagg 38433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 172 - 281
Target Start/End: Complemental strand, 61361 - 61253
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttca-aatttcaatgacaagttagt 270  Q
    ||||||||| |||| |||||||||||||| |||||  |||||||||||| ||| |||||||||||||||| |||||||| ||||| ||  | || |||||    
T  61361 tgtaattaacgtgtttgttttgtgtgttaatattattaaattgtcctttatttatatgtgtattaaatttaacttttcataatttaaa--ataaattagt 61264  T
Q  271 aatattaatta 281  Q
    |||||||||||    
T  61263 aatattaatta 61253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 49162 - 49285
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgac-ttttcaaatttcaatgacaagttagt 270  Q
    |||||||||  |||||  ||||||||||| |||||  |||||||| |||||||| |||| ||||||||||||| |||||| |||||||  |||| |||||    
T  49162 tgtaattaatatgtctactttgtgtgttaatattattaaattgtcatttgtttgcatgtttattaaatttgactttttcatatttcaa-aacaaattagt 49260  T
Q  271 aatattaattaagagtatgtttagg 295  Q
    | ||||||||| | |||||||||||    
T  49261 agtattaattaggggtatgtttagg 49285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 218 - 294
Target Start/End: Original strand, 25771 - 25845
Alignment:
Q  218 tttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaattaagagtatgtttag 294  Q
    ||||||||||||||||||||||||||| ||||| ||||||| ||||||| |||| ||||||||| | ||||||||||    
T  25771 tttgtttgtatgtgtattaaatttgac-tttcatatttcaa-gacaagtgagtagtattaattaggggtatgtttag 25845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 255
Target Start/End: Complemental strand, 23729 - 23647
Alignment:
Q  172 tgtaattaaggtgtctgttttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaattt 255  Q
    ||||||||| |||| | |||||| ||||| ||||| |||||||| |||| |||||||||||||||||||||| |||||| ||||    
T  23729 tgtaattaatgtgtttattttgtatgttaatattatcaaattgttcttt-tttgtatgtgtattaaatttgatttttcacattt 23647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 96 - 153
Target Start/End: Original strand, 24095 - 24152
Alignment:
Q  96 tacttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaagaaat 153  Q
    |||| ||||||||| ||||||||||||  |||||| ||||||||||||||||||||||    
T  24095 tactccctccgtcctttaatgtaggcattcattgcatttttcacatttcttaagaaat 24152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 20100 - 20148
Alignment:
Q  232 tattaaatttgacttttcaaatttcaatgacaagttagtaatattaatta 281  Q
    |||||||||||||||||||||||||||  ||||||||||| |||||||||    
T  20100 tattaaatttgacttttcaaatttcaa-aacaagttagtagtattaatta 20148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 5954 - 5866
Alignment:
Q  190 tttgtgtgttagtattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaatgacaagttagtaatattaat 279  Q
    ||||||||| | | |||| ||||||| |||||||  |||||||||| |||||||||||||| | || ||| ||||||||||| |||||||    
T  5954 tttgtgtgtgaattttactaaattgttctttgttcatatgtgtatttaatttgacttttcataatttaat-acaagttagtagtattaat 5866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 12951 - 13000
Alignment:
Q  312 ttgtaatttaaaaagggatttacattgaaggataaaaataaaatcaaatgg 362  Q
    |||||||||||||| || |||||||| ||||| ||||||||||||||||||    
T  12951 ttgtaatttaaaaaagg-tttacatttaaggacaaaaataaaatcaaatgg 13000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University