View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8027_low_2 (Length: 586)
Name: NF8027_low_2
Description: NF8027
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8027_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 536; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 536; E-Value: 0
Query Start/End: Original strand, 1 - 576
Target Start/End: Original strand, 37357508 - 37358083
Alignment:
| Q |
1 |
ttcccctatgtgttttatgactacttatgagtgtttgatcatcctcttaaaattatctttggttaacgccattgctgtatcttttgcagttccttgtttg |
100 |
Q |
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| T |
37357508 |
ttcccctatgtgttttatgactacttatgagtgtttgatcatcctcttaaaattatctttggttaacgccattgttgtatcttttgcagttccttgtttg |
37357607 |
T |
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| Q |
101 |
ataatggcttccctcagggcggcattactacaatttttgtctagaaaatcaagctcttcccttaggaattattttttatcttcgagacctagtaggtgtg |
200 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
37357608 |
ataatggcttccctcaggtcggcattactacaatttttgtctagaaaatcaagctcttcccttaggaattattttttatcttcgagacttagtaggtgtg |
37357707 |
T |
|
| Q |
201 |
ttgttctccaattgacttcccctatttcgacaaggatgactgattaggttccatatgtaaagcgatatggtgattctcctttggtcgaatgtggagtgga |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
37357708 |
ttgttctccaattgacttcccctatttcgacaaggatgactgatttggttccatatgtaaagcgatatggtgattctcatttggtcgaatgtggagtgga |
37357807 |
T |
|
| Q |
301 |
tatgttcttgcagtattggatacagtttgtcggcccaatttcctttggcttaatcgagtcttctctttaatcatcgaaagaaacatgatttactgcttct |
400 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37357808 |
tatgttcttgcagtattggatacagtttgtcgacccaatttcctttggcttaatcgagtcttctctttaatcatcgaaagaaacatgatttactgcttct |
37357907 |
T |
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| Q |
401 |
gcttgaccattcattttggcatgctcaattgaagtgagcagctttcttactttaactcttcgaggtattctccaaatttcctatatgaaactgcgctcta |
500 |
Q |
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| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37357908 |
gattgaccattcattttggcatgctccattgaagtgaacagctttcttactttaactcttcgaggtattctccaaatttcctatatgaaactgcgctcta |
37358007 |
T |
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| Q |
501 |
ttgttggtaaccacgactttttggatttgaatcttgcaaaatgtttattttgaagaaatgaagcatattcttcgac |
576 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
37358008 |
ttgttggtaaccacgactttttggatttgaatcttgcaaaatgtttattttgaagaaatgaagcatattgttcgac |
37358083 |
T |
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