View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8029_low_18 (Length: 259)
Name: NF8029_low_18
Description: NF8029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8029_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 35 - 247
Target Start/End: Complemental strand, 19021891 - 19021679
Alignment:
| Q |
35 |
ctgagagagtaattaaaagaagtagaagaaccttcaagccagtggatcctccaccataggcattgtactgaacagcacgcatgagtttgttctccatgtc |
134 |
Q |
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| T |
19021891 |
ctgagagagtaattaaaagaagtagaagaaccttcaagccagtggatcctccaccataggcattgtactgaacagcacgcatgagtttgttctccatgtc |
19021792 |
T |
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| Q |
135 |
cacagcgagggagtgagtgtgtaggaccacaaacaaacagaaagtgaaacgaagttaatataaatgtatggttagaaacaagacaagtagttgcatccta |
234 |
Q |
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| T |
19021791 |
cacagcgagggagtgagtgtgtaggaccacaaacaaacagaaagtgaaacgaagttaatataaatgtatggttagaaacaagacaagtagttgcatccta |
19021692 |
T |
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| Q |
235 |
ggtcacacaggtt |
247 |
Q |
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| T |
19021691 |
ggtcacataggtt |
19021679 |
T |
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