View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8030_low_16 (Length: 210)

Name: NF8030_low_16
Description: NF8030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8030_low_16
NF8030_low_16
[»] scaffold0109 (4 HSPs)
scaffold0109 (70-210)||(41416-41556)
scaffold0109 (71-206)||(13028-13166)
scaffold0109 (1-47)||(40899-40945)
scaffold0109 (4-47)||(13638-13681)
[»] chr3 (60 HSPs)
chr3 (71-210)||(24186042-24186181)
chr3 (70-210)||(15399657-15399797)
chr3 (76-210)||(5110548-5110682)
chr3 (69-210)||(10008450-10008591)
chr3 (69-210)||(15345384-15345525)
chr3 (69-210)||(20059193-20059334)
chr3 (70-210)||(15713195-15713335)
chr3 (73-210)||(16804083-16804223)
chr3 (69-210)||(10909060-10909201)
chr3 (69-210)||(12889559-12889700)
chr3 (69-210)||(43165525-43165666)
chr3 (69-210)||(48428297-48428438)
chr3 (70-210)||(16638624-16638764)
chr3 (70-210)||(26790552-26790692)
chr3 (69-210)||(16753840-16753981)
chr3 (69-210)||(6603585-6603726)
chr3 (69-210)||(13255540-13255681)
chr3 (79-210)||(3688803-3688934)
chr3 (73-210)||(23414926-23415066)
chr3 (69-210)||(5422069-5422210)
chr3 (69-210)||(53382157-53382298)
chr3 (73-210)||(16695018-16695158)
chr3 (69-210)||(15586531-15586672)
chr3 (74-210)||(11861208-11861347)
chr3 (74-210)||(12501788-12501927)
chr3 (145-210)||(6596981-6597046)
chr3 (93-193)||(15065945-15066045)
chr3 (69-125)||(15358933-15358989)
chr3 (159-210)||(15358992-15359043)
chr3 (1-47)||(3688277-3688323)
chr3 (1-47)||(5422680-5422726)
chr3 (1-47)||(10908544-10908590)
chr3 (1-47)||(12889043-12889089)
chr3 (1-47)||(13255024-13255070)
chr3 (1-47)||(15345995-15346041)
chr3 (1-47)||(15587142-15587188)
chr3 (1-47)||(15713806-15713852)
chr3 (1-47)||(16638107-16638153)
chr3 (1-47)||(20059804-20059850)
chr3 (1-47)||(26191066-26191112)
chr3 (1-47)||(26791163-26791209)
chr3 (1-47)||(43165009-43165055)
chr3 (1-47)||(48427781-48427827)
chr3 (4-47)||(16804697-16804740)
chr3 (1-47)||(6603070-6603116)
chr3 (1-47)||(10007934-10007980)
chr3 (1-47)||(15358417-15358463)
chr3 (1-47)||(16754451-16754497)
chr3 (5-47)||(18437478-18437520)
chr3 (1-42)||(15400272-15400313)
chr3 (136-193)||(23079173-23079230)
chr3 (129-204)||(14873727-14873805)
chr3 (4-47)||(16694501-16694544)
chr3 (4-47)||(24185527-24185570)
chr3 (1-47)||(15065405-15065451)
chr3 (134-210)||(17497606-17497685)
chr3 (72-191)||(10408831-10408950)
chr3 (5-47)||(14579158-14579200)
chr3 (1-47)||(53382768-53382814)
chr3 (4-45)||(15261967-15262008)
[»] scaffold0789 (1 HSPs)
scaffold0789 (70-210)||(199-339)
[»] chr6 (37 HSPs)
chr6 (71-210)||(22829431-22829570)
chr6 (71-206)||(5836277-5836412)
chr6 (70-210)||(25115648-25115788)
chr6 (69-210)||(29589484-29589625)
chr6 (76-210)||(2871847-2871981)
chr6 (69-210)||(24292827-24292968)
chr6 (76-210)||(27205724-27205858)
chr6 (76-210)||(27243370-27243504)
chr6 (76-210)||(28260242-28260376)
chr6 (76-210)||(28285540-28285674)
chr6 (76-210)||(28338991-28339125)
chr6 (71-210)||(25756657-25756799)
chr6 (69-210)||(16574985-16575126)
chr6 (69-210)||(16620254-16620395)
chr6 (69-210)||(28312725-28312866)
chr6 (94-193)||(27559031-27559130)
chr6 (136-210)||(21764974-21765051)
chr6 (93-210)||(22436988-22437108)
chr6 (1-47)||(28260853-28260899)
chr6 (1-47)||(28285017-28285063)
chr6 (1-47)||(28312209-28312255)
chr6 (1-47)||(28339602-28339648)
chr6 (1-47)||(29590095-29590141)
chr6 (1-47)||(16574469-16574515)
chr6 (1-47)||(16620865-16620911)
chr6 (1-47)||(16961138-16961184)
chr6 (93-210)||(18404986-18405106)
chr6 (1-47)||(27190015-27190061)
chr6 (1-47)||(27259179-27259225)
chr6 (4-47)||(16925296-16925339)
chr6 (2-47)||(2872458-2872504)
chr6 (1-47)||(22828011-22828057)
chr6 (1-47)||(24293438-24293484)
chr6 (1-47)||(25115131-25115177)
chr6 (1-47)||(5836884-5836930)
chr6 (1-47)||(22436448-22436494)
chr6 (1-47)||(27559625-27559671)
[»] chr4 (33 HSPs)
chr4 (71-210)||(14683800-14683939)
chr4 (70-210)||(19635368-19635508)
chr4 (70-210)||(40476272-40476412)
chr4 (69-210)||(17091789-17091930)
chr4 (70-210)||(14300619-14300759)
chr4 (73-210)||(13513585-13513725)
chr4 (69-209)||(8389643-8389783)
chr4 (69-210)||(12479831-12479972)
chr4 (70-210)||(27714568-27714708)
chr4 (69-210)||(8050263-8050404)
chr4 (69-210)||(19775433-19775574)
chr4 (69-210)||(23958978-23959119)
chr4 (69-210)||(16233632-16233773)
chr4 (73-210)||(18604456-18604596)
chr4 (87-210)||(18224110-18224236)
chr4 (71-141)||(16250559-16250629)
chr4 (1-47)||(8050874-8050920)
chr4 (1-47)||(8389127-8389173)
chr4 (1-47)||(12479315-12479361)
chr4 (1-47)||(16234243-16234289)
chr4 (1-47)||(17092400-17092446)
chr4 (1-47)||(19776044-19776090)
chr4 (1-47)||(23958462-23958508)
chr4 (1-47)||(27714051-27714097)
chr4 (1-47)||(14301230-14301276)
chr4 (1-47)||(19634851-19634897)
chr4 (1-47)||(40475755-40475801)
chr4 (4-47)||(14683285-14683328)
chr4 (4-47)||(18224697-18224740)
chr4 (1-47)||(16352781-16352827)
chr4 (140-193)||(7357569-7357622)
chr4 (138-210)||(16248313-16248388)
chr4 (138-190)||(11204152-11204204)
[»] scaffold0259 (2 HSPs)
scaffold0259 (71-210)||(8520-8659)
scaffold0259 (4-47)||(8005-8048)
[»] chr7 (36 HSPs)
chr7 (71-210)||(12690723-12690862)
chr7 (71-210)||(14957730-14957869)
chr7 (71-210)||(11550011-11550150)
chr7 (70-210)||(11234122-11234262)
chr7 (71-210)||(11984214-11984356)
chr7 (70-210)||(13689262-13689402)
chr7 (70-210)||(15157966-15158106)
chr7 (69-210)||(8710825-8710966)
chr7 (70-210)||(18180964-18181104)
chr7 (73-210)||(9591588-9591728)
chr7 (69-210)||(14335616-14335757)
chr7 (71-206)||(16726351-16726489)
chr7 (71-206)||(17703365-17703503)
chr7 (69-210)||(10873681-10873822)
chr7 (69-210)||(44788260-44788401)
chr7 (70-210)||(18587080-18587220)
chr7 (1-47)||(8200752-8200798)
chr7 (1-47)||(8710309-8710355)
chr7 (1-47)||(10873394-10873440)
chr7 (1-47)||(11234733-11234779)
chr7 (1-47)||(14149956-14150002)
chr7 (1-47)||(14335100-14335146)
chr7 (1-47)||(18587691-18587737)
chr7 (1-47)||(44788871-44788917)
chr7 (1-47)||(13688745-13688791)
chr7 (1-47)||(15158577-15158623)
chr7 (4-47)||(9591075-9591118)
chr7 (4-47)||(11550622-11550665)
chr7 (4-47)||(14957261-14957304)
chr7 (1-36)||(15146415-15146450)
chr7 (4-47)||(16726903-16726946)
chr7 (4-47)||(17703975-17704018)
chr7 (72-191)||(26115496-26115615)
chr7 (4-41)||(12690209-12690246)
chr7 (72-189)||(49155525-49155642)
chr7 (138-190)||(21755702-21755754)
[»] chr8 (36 HSPs)
chr8 (69-210)||(18859874-18860015)
chr8 (69-210)||(17671365-17671506)
chr8 (69-210)||(22126302-22126443)
chr8 (70-210)||(22117518-22117658)
chr8 (75-209)||(32603448-32603585)
chr8 (71-210)||(22031402-22031543)
chr8 (71-210)||(22043126-22043268)
chr8 (76-210)||(19481415-19481549)
chr8 (73-206)||(30310488-30310624)
chr8 (69-210)||(20015606-20015747)
chr8 (73-210)||(15536684-15536824)
chr8 (69-210)||(19115697-19115838)
chr8 (1-47)||(17671976-17672022)
chr8 (1-47)||(19115181-19115227)
chr8 (1-47)||(19482026-19482072)
chr8 (1-47)||(20016217-20016263)
chr8 (1-47)||(22126913-22126959)
chr8 (1-47)||(22118129-22118175)
chr8 (4-47)||(15536167-15536210)
chr8 (4-47)||(22030887-22030930)
chr8 (4-47)||(30311098-30311141)
chr8 (1-47)||(18859358-18859404)
chr8 (5-47)||(21391815-21391857)
chr8 (5-47)||(21781141-21781183)
chr8 (5-47)||(21786309-21786351)
chr8 (122-193)||(21163890-21163961)
chr8 (4-47)||(21164492-21164535)
chr8 (4-47)||(22042611-22042654)
chr8 (4-47)||(22129571-22129614)
chr8 (1-47)||(19980748-19980794)
chr8 (5-47)||(21253730-21253772)
chr8 (5-47)||(21920058-21920100)
chr8 (134-210)||(18880997-18881076)
chr8 (136-193)||(19981331-19981388)
chr8 (72-189)||(28984211-28984328)
chr8 (138-190)||(16268587-16268639)
[»] scaffold0431 (2 HSPs)
scaffold0431 (70-210)||(10629-10769)
scaffold0431 (1-47)||(10112-10158)
[»] chr2 (45 HSPs)
chr2 (72-210)||(21139421-21139559)
chr2 (70-210)||(24874190-24874330)
chr2 (69-210)||(24712896-24713037)
chr2 (70-210)||(24265233-24265373)
chr2 (69-210)||(9338444-9338585)
chr2 (69-210)||(9487078-9487219)
chr2 (69-210)||(22322782-22322923)
chr2 (76-210)||(10871719-10871853)
chr2 (69-210)||(16984102-16984243)
chr2 (71-210)||(22462918-22463060)
chr2 (74-210)||(23116496-23116635)
chr2 (69-210)||(27374131-27374272)
chr2 (75-210)||(23205182-23205320)
chr2 (75-210)||(23676786-23676924)
chr2 (70-210)||(44383010-44383150)
chr2 (69-210)||(17001862-17002003)
chr2 (71-209)||(24704920-24705061)
chr2 (76-210)||(24657095-24657232)
chr2 (74-193)||(11351168-11351287)
chr2 (71-210)||(24678351-24678493)
chr2 (1-47)||(9337928-9337974)
chr2 (1-47)||(9486562-9486608)
chr2 (1-47)||(16983586-16983632)
chr2 (1-47)||(17001346-17001392)
chr2 (1-47)||(21143092-21143138)
chr2 (1-47)||(22323393-22323439)
chr2 (1-47)||(27220362-27220408)
chr2 (1-47)||(27373615-27373661)
chr2 (76-193)||(23028919-23029035)
chr2 (136-210)||(21320440-21320517)
chr2 (1-47)||(10871196-10871242)
chr2 (1-47)||(24712380-24712426)
chr2 (1-47)||(24874801-24874847)
chr2 (1-47)||(41606436-41606482)
chr2 (1-47)||(44383621-44383667)
chr2 (1-47)||(24264716-24264762)
chr2 (1-47)||(24657709-24657755)
chr2 (1-47)||(24705533-24705579)
chr2 (5-47)||(11351762-11351804)
chr2 (71-193)||(19716474-19716596)
chr2 (71-193)||(19721037-19721159)
chr2 (5-47)||(22733825-22733867)
chr2 (1-47)||(24677833-24677879)
chr2 (134-210)||(22733211-22733290)
chr2 (7-47)||(23105779-23105819)
[»] scaffold0028 (6 HSPs)
scaffold0028 (70-210)||(21258-21398)
scaffold0028 (70-210)||(11730-11870)
scaffold0028 (72-210)||(55267-55405)
scaffold0028 (1-47)||(53471-53517)
scaffold0028 (1-47)||(11213-11259)
scaffold0028 (1-47)||(17681-17727)
[»] chr5 (42 HSPs)
chr5 (70-210)||(22137832-22137972)
chr5 (70-210)||(22351083-22351223)
chr5 (70-210)||(29473155-29473295)
chr5 (70-210)||(19773124-19773264)
chr5 (70-210)||(22329969-22330109)
chr5 (70-210)||(37288578-37288718)
chr5 (70-210)||(41774006-41774146)
chr5 (70-209)||(14996822-14996961)
chr5 (69-210)||(16359665-16359806)
chr5 (69-210)||(34569657-34569798)
chr5 (69-208)||(27521569-27521708)
chr5 (70-209)||(27682483-27682622)
chr5 (70-210)||(27613520-27613660)
chr5 (71-208)||(18782279-18782419)
chr5 (69-210)||(40711943-40712084)
chr5 (74-210)||(20803765-20803904)
chr5 (74-210)||(23461139-23461278)
chr5 (76-172)||(27665610-27665706)
chr5 (1-47)||(16359149-16359195)
chr5 (1-47)||(22330580-22330626)
chr5 (1-47)||(27613003-27613049)
chr5 (1-47)||(27666183-27666229)
chr5 (1-47)||(29473766-29473812)
chr5 (1-47)||(34569141-34569187)
chr5 (1-47)||(40711427-40711473)
chr5 (1-47)||(41773489-41773535)
chr5 (1-47)||(14997432-14997478)
chr5 (1-47)||(19772607-19772653)
chr5 (1-47)||(22137315-22137361)
chr5 (1-47)||(22350566-22350612)
chr5 (135-193)||(23526280-23526338)
chr5 (1-47)||(27521053-27521099)
chr5 (1-47)||(37289189-37289235)
chr5 (4-47)||(18781764-18781807)
chr5 (4-47)||(21343107-21343150)
chr5 (138-193)||(23078004-23078059)
chr5 (1-47)||(20803244-20803290)
chr5 (1-47)||(27683093-27683139)
chr5 (136-193)||(21883005-21883062)
chr5 (134-210)||(25429648-25429727)
chr5 (138-190)||(22505893-22505945)
chr5 (1-47)||(21882421-21882467)
[»] chr1 (29 HSPs)
chr1 (70-210)||(22400567-22400707)
chr1 (70-210)||(21842459-21842599)
chr1 (71-210)||(19109616-19109757)
chr1 (69-210)||(33388001-33388142)
chr1 (70-210)||(21833549-21833689)
chr1 (69-210)||(51330464-51330605)
chr1 (75-210)||(17041985-17042122)
chr1 (79-210)||(16347567-16347698)
chr1 (76-210)||(41350640-41350774)
chr1 (71-210)||(24784826-24784968)
chr1 (73-210)||(21228525-21228665)
chr1 (74-187)||(22435728-22435841)
chr1 (1-47)||(16348178-16348224)
chr1 (1-47)||(21833032-21833078)
chr1 (1-47)||(21839680-21839726)
chr1 (1-47)||(33388612-33388658)
chr1 (1-47)||(41351251-41351297)
chr1 (1-47)||(51331075-51331121)
chr1 (127-210)||(21176671-21176757)
chr1 (4-47)||(19109101-19109144)
chr1 (92-210)||(20081345-20081466)
chr1 (1-47)||(24785440-24785486)
chr1 (138-190)||(20074701-20074753)
chr1 (4-47)||(17042598-17042641)
chr1 (7-44)||(22359830-22359867)
chr1 (2-47)||(22502872-22502917)
chr1 (138-190)||(21961373-21961425)
chr1 (138-190)||(31536989-31537041)
chr1 (138-190)||(52989087-52989139)
[»] scaffold0003 (1 HSPs)
scaffold0003 (72-190)||(424571-424689)
[»] scaffold0007 (1 HSPs)
scaffold0007 (72-210)||(48928-49066)
[»] scaffold0177 (3 HSPs)
scaffold0177 (71-210)||(11256-11398)
scaffold0177 (71-210)||(14941-15083)
scaffold0177 (1-47)||(11870-11916)
[»] scaffold0044 (4 HSPs)
scaffold0044 (70-210)||(3685-3825)
scaffold0044 (80-210)||(17431-17564)
scaffold0044 (4-47)||(16907-16950)
scaffold0044 (1-47)||(3168-3214)
[»] scaffold1881 (1 HSPs)
scaffold1881 (73-210)||(380-520)
[»] scaffold0055 (2 HSPs)
scaffold0055 (69-210)||(22507-22648)
scaffold0055 (1-47)||(21991-22037)
[»] scaffold0052 (1 HSPs)
scaffold0052 (69-210)||(7496-7637)
[»] scaffold0009 (2 HSPs)
scaffold0009 (74-210)||(229752-229891)
scaffold0009 (138-189)||(251948-251999)
[»] scaffold0451 (1 HSPs)
scaffold0451 (71-210)||(13932-14074)
[»] scaffold2059 (1 HSPs)
scaffold2059 (73-210)||(669-809)
[»] scaffold0546 (1 HSPs)
scaffold0546 (71-206)||(141-279)
[»] scaffold0010 (1 HSPs)
scaffold0010 (71-210)||(14686-14828)
[»] scaffold0285 (1 HSPs)
scaffold0285 (73-210)||(5262-5402)
[»] scaffold0130 (1 HSPs)
scaffold0130 (76-185)||(7707-7816)
[»] scaffold0080 (4 HSPs)
scaffold0080 (74-206)||(10143-10278)
scaffold0080 (74-206)||(12798-12933)
scaffold0080 (76-210)||(32146-32283)
scaffold0080 (76-179)||(37612-37715)
[»] scaffold1220 (1 HSPs)
scaffold1220 (74-210)||(1-140)
[»] scaffold0079 (2 HSPs)
scaffold0079 (71-210)||(36760-36902)
scaffold0079 (1-47)||(28822-28868)
[»] scaffold0019 (1 HSPs)
scaffold0019 (71-179)||(171380-171488)
[»] scaffold0008 (2 HSPs)
scaffold0008 (73-176)||(114-217)
scaffold0008 (82-176)||(139547-139641)
[»] scaffold0550 (2 HSPs)
scaffold0550 (74-210)||(10058-10197)
scaffold0550 (1-47)||(10672-10718)
[»] scaffold0412 (1 HSPs)
scaffold0412 (74-210)||(15479-15618)
[»] scaffold0289 (1 HSPs)
scaffold0289 (71-210)||(50-192)
[»] scaffold0181 (2 HSPs)
scaffold0181 (94-210)||(28828-28947)
scaffold0181 (1-47)||(29442-29488)
[»] scaffold1459 (2 HSPs)
scaffold1459 (89-210)||(992-1116)
scaffold1459 (1-47)||(1546-1592)
[»] scaffold0017 (2 HSPs)
scaffold0017 (94-209)||(16967-17085)
scaffold0017 (4-47)||(17580-17623)
[»] scaffold0305 (1 HSPs)
scaffold0305 (76-210)||(3131-3268)
[»] scaffold0297 (1 HSPs)
scaffold0297 (93-210)||(7557-7677)
[»] scaffold0081 (4 HSPs)
scaffold0081 (76-193)||(21871-21988)
scaffold0081 (76-193)||(37295-37412)
scaffold0081 (3-47)||(21350-21394)
scaffold0081 (3-47)||(36774-36818)
[»] scaffold0023 (2 HSPs)
scaffold0023 (76-193)||(30494-30611)
scaffold0023 (5-47)||(151829-151871)
[»] scaffold0819 (1 HSPs)
scaffold0819 (74-206)||(379-511)
[»] scaffold0102 (2 HSPs)
scaffold0102 (136-210)||(50245-50322)
scaffold0102 (2-47)||(50859-50904)
[»] scaffold0454 (1 HSPs)
scaffold0454 (1-47)||(9684-9730)
[»] scaffold0410 (1 HSPs)
scaffold0410 (74-179)||(406-511)
[»] scaffold0560 (1 HSPs)
scaffold0560 (1-47)||(8255-8301)
[»] scaffold0501 (2 HSPs)
scaffold0501 (137-210)||(252-328)
scaffold0501 (2-47)||(12408-12453)
[»] scaffold0273 (1 HSPs)
scaffold0273 (136-193)||(367-424)
[»] scaffold0198 (1 HSPs)
scaffold0198 (92-208)||(30570-30689)
[»] scaffold0042 (2 HSPs)
scaffold0042 (93-193)||(36740-36840)
scaffold0042 (1-47)||(37334-37380)
[»] scaffold1845 (1 HSPs)
scaffold1845 (138-193)||(1224-1279)
[»] scaffold0393 (1 HSPs)
scaffold0393 (1-47)||(15508-15554)
[»] scaffold0215 (1 HSPs)
scaffold0215 (1-47)||(28009-28055)
[»] scaffold1423 (1 HSPs)
scaffold1423 (135-210)||(278-356)
[»] scaffold0001 (1 HSPs)
scaffold0001 (138-190)||(514276-514328)
[»] scaffold1985 (1 HSPs)
scaffold1985 (4-47)||(86-129)
[»] scaffold0243 (1 HSPs)
scaffold0243 (5-44)||(24462-24501)
[»] scaffold0064 (1 HSPs)
scaffold0064 (74-169)||(69366-69461)
[»] scaffold0621 (1 HSPs)
scaffold0621 (5-47)||(4182-4224)
[»] scaffold0413 (1 HSPs)
scaffold0413 (5-47)||(3349-3391)
[»] scaffold0218 (1 HSPs)
scaffold0218 (5-47)||(25226-25268)
[»] scaffold0149 (1 HSPs)
scaffold0149 (1-47)||(573-619)
[»] scaffold0120 (1 HSPs)
scaffold0120 (137-210)||(11591-11667)
[»] scaffold0114 (1 HSPs)
scaffold0114 (5-47)||(17857-17899)
[»] scaffold0040 (1 HSPs)
scaffold0040 (5-47)||(111421-111463)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-47)||(35228-35274)
[»] scaffold0664 (1 HSPs)
scaffold0664 (72-193)||(7301-7422)
[»] scaffold0611 (1 HSPs)
scaffold0611 (134-210)||(9343-9422)
[»] scaffold0088 (1 HSPs)
scaffold0088 (138-187)||(30263-30312)
[»] scaffold0074 (1 HSPs)
scaffold0074 (4-45)||(5860-5901)
[»] scaffold0029 (1 HSPs)
scaffold0029 (135-192)||(8540-8597)
[»] scaffold0020 (1 HSPs)
scaffold0020 (72-193)||(98503-98624)
[»] scaffold2165 (1 HSPs)
scaffold2165 (138-190)||(726-778)
[»] scaffold0333 (1 HSPs)
scaffold0333 (7-47)||(18400-18440)
[»] scaffold0118 (1 HSPs)
scaffold0118 (138-190)||(790-842)
[»] scaffold0072 (1 HSPs)
scaffold0072 (72-192)||(54310-54430)
[»] scaffold0034 (1 HSPs)
scaffold0034 (151-210)||(122076-122138)


Alignment Details
Target: scaffold0109 (Bit Score: 125; Significance: 1e-64; HSPs: 4)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 41416 - 41556
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  41416 gtacgcttgcaatcagctacaatatgacccttcttgccacaccagacacacttcttgctctcttcaggacaaacattgcttttgtggcctttcccaccac 41515  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  41516 aattgaaacacacaatctcagtagcatccttcttcttaggc 41556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 71 - 206
Target Start/End: Complemental strand, 13166 - 13028
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||| || |||||||||||||| |||||    
T  13166 tacgcttgcaatcagctacaatatgacccttcttaccacaccagacacatttcttgatctcttcaggacaaacattactcttgtggcctttcccgccaca 13067  T
Q  171 attgaaacacacaat---ctcagcagcatccttcttctt 206  Q
     |||||||| |||||   | ||| |||||||||||||||    
T  13066 gttgaaacaaacaatatccgcaggagcatccttcttctt 13028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 40899 - 40945
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||    
T  40899 cagttgcttcagctgcctagtagataaaaactctgcaccactttcct 40945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 13681 - 13638
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||| || |||| |||||||||||    
T  13681 ttgcttcagctgcttagtagataagaattctgcaccactttcct 13638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 124; Significance: 6e-64; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 71 - 210
Target Start/End: Original strand, 24186042 - 24186181
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||    
T  24186042 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttgatctcttcaggacagacattgcttttgtggcctttcacaccaca 24186141  T
Q  171 attgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  24186142 attgaaacacacaatctcagtagcatccttcttcttaggc 24186181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 70 - 210
Target Start/End: Complemental strand, 15399797 - 15399657
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||||||||| || |||||||||||||| |||||||||||||||||||||||||| || || ||||| || ||||||||||||||||||||||||||||    
T  15399797 gtacgcttgcattcggctacaatatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacattgcttttgtggcctttcccaccac 15399698  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  15399697 aattgaaacacacaatctcagtagcatccttcttcttaggc 15399657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 76 - 210
Target Start/End: Complemental strand, 5110682 - 5110548
Alignment:
Q  76 ttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattga 175  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||| || ||||| || || |||||||||||||||||| ||||||||||||    
T  5110682 ttgcaatcagctacaacatgacctttcttgccacaccggacacacttcttaatttcctcagggcagacgttgcttttgtggcctttctcaccacaattga 5110583  T
Q  176 aacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||| |||||||||||||||||||||    
T  5110582 aacacacaatctctgcagcatccttcttcttaggc 5110548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 10008450 - 10008591
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||| |||||||||||||||||||||||||| || || ||||| || || |||||||||||||||||| |||||    
T  10008450 tgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcacca 10008549  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  10008550 caattgaaacacacaatctctgcagcatccttcttcttaggc 10008591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 69 - 210
Target Start/End: Complemental strand, 15345525 - 15345384
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||| |||||||||||||||||||||||||| || || ||||| || || |||||||||||||||||| |||||    
T  15345525 tgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcacca 15345426  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  15345425 caattgaaacacacaatctctgcagcatccttcttcttaggc 15345384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 69 - 210
Target Start/End: Complemental strand, 20059334 - 20059193
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||| |||||||||||||||||||||||||| || || ||||| || || |||||||||||||||||| |||||    
T  20059334 tgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcacca 20059235  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  20059234 caattgaaacacacaatctctgcagcatccttcttcttaggc 20059193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 70 - 210
Target Start/End: Complemental strand, 15713335 - 15713195
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| || |||||||| || || |||||||||||||||||| ||||||    
T  15713335 gtacgcttgcattcagctacaatatgacctttcttgccacaccgaacacacttcttgatttcttcagggcagacgttgcttttgtggcctttctcaccac 15713236  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||| | |||||||||||||||||||    
T  15713235 aattgaaacacacaatctctgtagcatccttcttcttaggc 15713195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 73 - 210
Target Start/End: Complemental strand, 16804223 - 16804083
Alignment:
Q  73 cgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaat 172  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||| |||||||||    
T  16804223 cgcttgcaatcagctacaatatgacctttcttgccacaccggacacatttcttgatctcttcaggacaaacattgctcttgtggcctttctcaccacaat 16804124  T
Q  173 tgaaacacacaatctcagc---agcatccttcttcttaggc 210  Q
    |||||||   |||||||||   |||||||||||||||||||    
T  16804123 tgaaacaagtaatctcagctggagcatccttcttcttaggc 16804083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 10909060 - 10909201
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||| |||||||||||||||||||||||||| || || ||||| || || |||||||||||||||||| |||||    
T  10909060 tgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcacca 10909159  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| ||| |||||||||||||||||    
T  10909160 caattgaaacacacaatctctgcaacatccttcttcttaggc 10909201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 12889559 - 12889700
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| || || ||||| || || ||||| |||||||||||| |||||    
T  12889559 tgtacggttgcaatcagctacaacatgacccttcttaccacaccggacacacttcttgatttcctcagggcagacgttgctcttgtggcctttctcacca 12889658  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  12889659 caattgaaacacacaatctctgcagcatccttcttcttaggc 12889700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 43165525 - 43165666
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| || || ||||| || || ||||| |||||||||||| |||||    
T  43165525 tgtacggttgcaatcagctacaacatgacccttcttaccacaccggacacacttcttgatttcctcagggcagacgttgctcttgtggcctttctcacca 43165624  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  43165625 caattgaaacacacaatctctgcagcatccttcttcttaggc 43165666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 48428297 - 48428438
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| || || ||||| || || ||||| |||||||||||| |||||    
T  48428297 tgtacggttgcaatcagctacaacatgacccttcttaccacaccggacacacttcttgatttcctcagggcagacgttgctcttgtggcctttctcacca 48428396  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  48428397 caattgaaacacacaatctctgcagcatccttcttcttaggc 48428438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 16638624 - 16638764
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||| |||||||||||||||| |||||| ||||||||||||||| |||||||||| || |||||||| || || ||||| |||||||||||| ||||||    
T  16638624 gtacgattgcaatcagctacaacatgacctttcttgccacaccgggcacacttcttgatttcttcagggcagacgttgctcttgtggcctttctcaccac 16638723  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  16638724 aattgaaacacacaatctctgcagcatccttcttcttaggc 16638764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 70 - 210
Target Start/End: Complemental strand, 26790692 - 26790552
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||||||||||||| || || |||||  | || ||||| |||||||||||| ||||||    
T  26790692 gtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggtagacgttgctcttgtggcctttctcaccac 26790593  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  26790592 aattgaaacacacaatctctgcagcatccttcttcttaggc 26790552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 69 - 210
Target Start/End: Complemental strand, 16753981 - 16753840
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||||||||| ||||||| |||||||||||| || || ||||||||  | ||||| |||||||||||| |||||    
T  16753981 tgtacgattgcaatcagctacaacatgacccttcttaccacaccagacacacttcttgatttcctcaggacaggcgttgctcttgtggcctttctcacca 16753882  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  16753881 caattgaagcacacaatctctgcagcatccttcttcttaggc 16753840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 6603585 - 6603726
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||| ||||||| |||||||||||||| ||||| || || ||||||||  | ||||| |||||||||||| |||||    
T  6603585 tgtacgattgcaatcagctacaacatgatccttcttaccacaccggacacagttcttgatttcctcaggacaggcgttgctcttgtggcctttctcacca 6603684  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  6603685 caattgaagcacacaatctctgcagcatccttcttcttaggc 6603726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 13255540 - 13255681
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||| | |||||||||||| |||||||||||||||||||| || || |||| |||| | ||||| |||||||||||| |||||    
T  13255540 tgtacggttgcaatcagctaccacatgacccttcttaccacaccggacacacttcttgatttcctcagaacaagcgttgctcttgtggcctttctcacca 13255639  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||| ||||||||||| |||||||||||| ||||||||    
T  13255640 caattgaagcacacaatctctgcagcatccttcctcttaggc 13255681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 79 - 210
Target Start/End: Original strand, 3688803 - 3688934
Alignment:
Q  79 caatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattgaaac 178  Q
    ||||||||||| | |||||||||||| |||||||||||||||||||| || || |||| |||  | ||||| |||||||||||| ||||||||||||| |    
T  3688803 caatcagctacgacatgacccttcttaccacaccggacacacttcttgatttcctcagaacaggcgttgctcttgtggcctttctcaccacaattgaagc 3688902  T
Q  179 acacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||||||||||||||||    
T  3688903 acacaatctcagcagcatccttcttcttaggc 3688934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 73 - 210
Target Start/End: Complemental strand, 23415066 - 23414926
Alignment:
Q  73 cgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaat 172  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||| |||||||||||| || |||||||||||| | ||| | |    
T  23415066 cgcttgcaatcagctacaatatgacccttcttgtcacaccggacacatttcttgatctctttaggacaaacattactcttgtggcctttctcgccatagt 23414967  T
Q  173 tgaaacacacaatct---cagcagcatccttcttcttaggc 210  Q
    ||||||| |||||||   ||| |||||||||||||||||||    
T  23414966 tgaaacagacaatctccgcaggagcatccttcttcttaggc 23414926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 69 - 210
Target Start/End: Complemental strand, 5422210 - 5422069
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||| ||||| |||||||||||||||||||| || || ||||| ||  | || || |||||||||||| |||||    
T  5422210 tgtacgattgcaatcagctacaacatgacctttcttaccacaccggacacacttcttgatttcctcagggcaggcgttactcttgtggcctttctcacca 5422111  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  5422110 caattgaagcacacaatctctgcagcatccttcttcttaggc 5422069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 69 - 210
Target Start/End: Complemental strand, 53382298 - 53382157
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| ||||||||||| || | |||||||||||| |||||||||||||||||||| || || |||||||| || ||||| |||||||||||| | |||    
T  53382298 tgtacgattgcaatcagccaccacatgacccttcttaccacaccggacacacttcttgatttcctcaggacagacgttgctcttgtggcctttctcgcca 53382199  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    || ||||| ||||||||||| |||||||||||||||||||||    
T  53382198 cagttgaagcacacaatctctgcagcatccttcttcttaggc 53382157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 73 - 210
Target Start/End: Original strand, 16695018 - 16695158
Alignment:
Q  73 cgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaat 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||  | ||||||||||| || ||| |||||||| | |||||||    
T  16695018 cgcttgcaatcagctacaatatgacccttcttgccacaccggacacatttcttgatctccaccggacaaacattactcttgcggcctttctcgccacaat 16695117  T
Q  173 tgaaacacacaatctcagc---agcatccttcttcttaggc 210  Q
    |||||||   |||||||||   |||||||||||||||||||    
T  16695118 tgaaacaagtaatctcagctggagcatccttcttcttaggc 16695158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 69 - 210
Target Start/End: Complemental strand, 15586672 - 15586531
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| ||||||||||| || | |||||||||||| |||||||||||||||||||| || || |||| |||  | ||||| |||||||||||| |||||    
T  15586672 tgtacggttgcaatcagccaccacatgacccttcttaccacaccggacacacttcttgatttcctcagaacaggcgttgctcttgtggcctttctcacca 15586573  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||| ||||||||||| |||||||||||| ||||||||    
T  15586572 caattgaagcacacaatctccgcagcatccttcctcttaggc 15586531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 74 - 210
Target Start/End: Original strand, 11861208 - 11861347
Alignment:
Q  74 gcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaatt 173  Q
    ||||||||||||||| | ||||||||||||| ||||||| || ||| ||||| | ||| || |||||||||||||| |||||||||||| ||||||||||    
T  11861208 gcttgcaatcagctaaagtatgacccttcttaccacaccagaaacatttcttcacctcctctggacaaacattgctcttgtggcctttctcaccacaatt 11861307  T
Q  174 gaaacacacaatct---cagcagcatccttcttcttaggc 210  Q
    |||| | |||||||   ||| |||||||||||||||||||    
T  11861308 gaaatagacaatctccgcaggagcatccttcttcttaggc 11861347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 74 - 210
Target Start/End: Original strand, 12501788 - 12501927
Alignment:
Q  74 gcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaatt 173  Q
    |||||||||||||||   | |||||||||||||||||||||| ||| ||||| | ||| ||||||||||||||||| |||||||||||| | ||||||||    
T  12501788 gcttgcaatcagctaatgtgtgacccttcttgccacaccggaaacatttctttacctcctcaggacaaacattgctcttgtggcctttctcgccacaatt 12501887  T
Q  174 gaaacacacaatctcagcag---catccttcttcttaggc 210  Q
    ||||||   |||||||||||   |||||||||||||||||    
T  12501888 gaaacaggtaatctcagcaggaacatccttcttcttaggc 12501927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 145 - 210
Target Start/End: Original strand, 6596981 - 6597046
Alignment:
Q  145 ttgcttttgtggcctttcccaccacaattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||| |||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  6596981 ttgctcttgtggcctttctcaccacaattgaagcacacaatctctgcagcatccttcttcttaggc 6597046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 93 - 193
Target Start/End: Original strand, 15065945 - 15066045
Alignment:
Q  93 atgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagca 192  Q
    |||||||||||| |||||||||| |||  | || | |||||| |||||||||||||| |||||||||||| |||||||||| ||||| |||||| |||||    
T  15065945 atgacccttcttaccacaccggaaacatctttttacctcttctggacaaacattgctcttgtggcctttctcaccacaattaaaacagacaatcgcagca 15066044  T
Q  193 g 193  Q
    |    
T  15066045 g 15066045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 15358933 - 15358989
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttctt 125  Q
    |||||||||||| || |||||||||||||| ||||||||||||||||||||||||||    
T  15358933 tgtacgcttgcattcggctacaatatgacctttcttgccacaccggacacacttctt 15358989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 15358992 - 15359043
Alignment:
Q  159 tttcccaccacaattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  15358992 tttcccaccacaattgaaacacacaatctcaatagcatccttcttcttaggc 15359043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3688277 - 3688323
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  3688277 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 3688323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 5422726 - 5422680
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  5422726 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 5422680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10908544 - 10908590
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  10908544 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 10908590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12889043 - 12889089
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  12889043 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 12889089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13255024 - 13255070
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  13255024 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 13255070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15346041 - 15345995
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  15346041 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 15345995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15587188 - 15587142
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  15587188 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 15587142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15713852 - 15713806
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  15713852 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 15713806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 16638107 - 16638153
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  16638107 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 16638153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20059850 - 20059804
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  20059850 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 20059804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26191112 - 26191066
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  26191112 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 26191066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26791209 - 26791163
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  26791209 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 26791163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 43165009 - 43165055
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  43165009 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 43165055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 48427781 - 48427827
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  48427781 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 48427827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 16804740 - 16804697
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  16804740 ttgcttcagctgcttagtagataaaaactctgcaccactttcct 16804697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6603070 - 6603116
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||    
T  6603070 cagttgcttcagctgcttagtagacaaaaactctgcaccactttcct 6603116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10007934 - 10007980
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||    
T  10007934 cagttgcttcagttgcttagtagataaaaactctgcaccactttcct 10007980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15358417 - 15358463
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  15358417 cagttgcttcagctgcttagtagataaaaactctgcaccactctcct 15358463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16754497 - 16754451
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||    
T  16754497 cagttgcttcagctgcttagtagacaaaaactctgcaccactttcct 16754451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 18437478 - 18437520
Alignment:
Q  5 tgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  18437478 tgcttcagctgcttagtagataaaaactctgcaccactttcct 18437520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15400313 - 15400272
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccact 42  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  15400313 cagttgcttcagctgcttagtagataaaaactctgcaccact 15400272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 23079230 - 23079173
Alignment:
Q  136 ggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagcag 193  Q
    |||||||||||||| |||||||||||| |||||||||| ||||| |||||| ||||||    
T  23079230 ggacaaacattgctcttgtggcctttctcaccacaattaaaacaaacaatcacagcag 23079173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 204
Target Start/End: Complemental strand, 14873805 - 14873727
Alignment:
Q  129 ctcttcaggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagc---agcatccttcttc 204  Q
    |||| |||||||| ||||||| || ||||||||| |||||||||| ||||| |||||||||||   |||||||||||||    
T  14873805 ctctccaggacaagcattgctcttatggcctttctcaccacaattaaaacagacaatctcagcatgagcatccttcttc 14873727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 16694501 - 16694544
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||| ||||||| |||||||||||    
T  16694501 ttgcttcagctgcttagtagataagaactctgcaccactttcct 16694544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 24185527 - 24185570
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||| ||||||| |||||||||||    
T  24185527 ttgcttcagctgcttagtagataagaactctgcaccactttcct 24185570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15065405 - 15065451
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||| |||||||| ||||||| |||||||||||    
T  15065405 cagttgcttcagctgcttggtagataagaactctgcaccactttcct 15065451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 17497606 - 17497685
Alignment:
Q  134 caggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatct---cagcagcatccttcttcttaggc 210  Q
    |||||||| |||| || |||||||||||| |||||||| | ||||| |||||||   ||| |||||||||||||||||||    
T  17497606 caggacaagcattactcttgtggcctttctcaccacaagtaaaacagacaatctctgcaggagcatccttcttcttaggc 17497685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 191
Target Start/End: Original strand, 10408831 - 10408950
Alignment:
Q  72 acgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttctta--atctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||||||| ||||||| | | ||||||||||  ||||||| ||  |||||| ||  ||||||||   ||||||||| || |||||||||||| ||||||    
T  10408831 acgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttcc--acaaacattactcttgtggcctttctcaccac 10408928  T
Q  170 aattgaaacacacaatctcagc 191  Q
    | ||| |||| |||||||||||    
T  10408929 atttgtaacaaacaatctcagc 10408950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 14579200 - 14579158
Alignment:
Q  5 tgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||||| ||||  ||||||||||    
T  14579200 tgcttcagctgcttagtagataaaaattctgcgccactttcct 14579158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 53382814 - 53382768
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||| || ||||| |||||||||| |||||||||||    
T  53382814 cagttgcttcagctgtttggtagacaaaaactctgcaccactttcct 53382768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 15261967 - 15262008
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttc 45  Q
    ||||||||||||||||||||| ||||||||||  ||||||||    
T  15261967 ttgcttcagctgcttagtagacaaaaactctgcgccactttc 15262008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0789 (Bit Score: 121; Significance: 3e-62; HSPs: 1)
Name: scaffold0789
Description:

Target: scaffold0789; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 199 - 339
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  199 gtacgcttgcaatcagctacaaaatgacccttcttgccacaccggacacatttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccat 298  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  299 aattgaaacacacaatttcagtagcatccttcttcttaggc 339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 1e-61; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 71 - 210
Target Start/End: Complemental strand, 22829570 - 22829431
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||    
T  22829570 tacgcttgcaatcagctacaatatgacccttcttgccacaccagacacacttcttgatctcttcaggacagacattgcttttgtggccttttccaccaca 22829471  T
Q  171 attgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  22829470 attgaaacacacaatctcagtagcatccttcttcttaggc 22829431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 71 - 206
Target Start/End: Complemental strand, 5836412 - 5836277
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||| ||||||||||||||||||    
T  5836412 tacgcttgcaatcggctacaatatgacccttcttgccacaccggacacatttcttgatctcttctggacaaacattgctttcgtggcctttcccaccaca 5836313  T
Q  171 attgaaacacacaatctcagcagcatccttcttctt 206  Q
     |||||||||||||||||||||||||||||||||||    
T  5836312 gttgaaacacacaatctcagcagcatccttcttctt 5836277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 25115648 - 25115788
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||| || || ||||| || ||||||||||||||||||||||||||||    
T  25115648 gtacgattgcaatcagctacaatatgacctttcttgccacaccgaacacacttcttgatttcctcagggcagacattgcttttgtggcctttcccaccac 25115747  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  25115748 aattgaaacacacaatctcagtagcatccttcttcttaggc 25115788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 69 - 210
Target Start/End: Complemental strand, 29589625 - 29589484
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| || || ||||| || || ||||| |||||||||||| |||||    
T  29589625 tgtacggttgcaatcagctacaacatgacccttcttaccacaccggacacacttcttgatttcctcagggcagacgttgctcttgtggcctttctcacca 29589526  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  29589525 caattgaaacacacaatctctgcagcatccttcttcttaggc 29589484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 76 - 210
Target Start/End: Complemental strand, 2871981 - 2871847
Alignment:
Q  76 ttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattga 175  Q
    ||||| |||||||||| |||||| |||||||||||||||||||||||||| || || ||||| || || |||||||||||||||||||||||||||||||    
T  2871981 ttgcagtcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttcccaccacaattga 2871882  T
Q  176 aacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||| | |||||||||||||||||||    
T  2871881 aacacacaatctctgtagcatccttcttcttaggc 2871847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 69 - 210
Target Start/End: Complemental strand, 24292968 - 24292827
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||| |||||||||||||||||||||||||| || || ||||| ||  | ||||| |||||||||||| | |||    
T  24292968 tgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcaggcgttgctcttgtggcctttctcgcca 24292869  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  24292868 caattgaaacacacaatctctgcagcatccttcttcttaggc 24292827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 76 - 210
Target Start/End: Original strand, 27205724 - 27205858
Alignment:
Q  76 ttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattga 175  Q
    |||||||||||||||| |||||| ||||| |||||||||||||||||||| || || ||||| ||  | ||||| |||||||||||| ||||||||||||    
T  27205724 ttgcaatcagctacaacatgacctttcttaccacaccggacacacttcttgatttcctcagggcaggcgttgctcttgtggcctttctcaccacaattga 27205823  T
Q  176 aacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||| |||||||||||||||||||||    
T  27205824 aacacacaatctctgcagcatccttcttcttaggc 27205858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 76 - 210
Target Start/End: Complemental strand, 27243504 - 27243370
Alignment:
Q  76 ttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattga 175  Q
    |||||||||||||||| |||||| ||||| |||||||||||||||||||| || || ||||| ||  | ||||| |||||||||||| ||||||||||||    
T  27243504 ttgcaatcagctacaacatgacctttcttaccacaccggacacacttcttgatttcctcagggcaggcgttgctcttgtggcctttctcaccacaattga 27243405  T
Q  176 aacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||| |||||||||||||||||||||    
T  27243404 aacacacaatctctgcagcatccttcttcttaggc 27243370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 76 - 210
Target Start/End: Complemental strand, 28260376 - 28260242
Alignment:
Q  76 ttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattga 175  Q
    |||||||||||||||| ||||||  |||| |||||||||||||||||||| || ||||| |||||  | ||||| |||||||||||||||||||||||||    
T  28260376 ttgcaatcagctacaacatgacctctcttaccacaccggacacacttcttgatttcttcgggacaggcgttgctcttgtggcctttcccaccacaattga 28260277  T
Q  176 aacacacaatctcagcagcatccttcttcttaggc 210  Q
    | ||||||||||| |||||||||||||||||||||    
T  28260276 agcacacaatctctgcagcatccttcttcttaggc 28260242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 76 - 210
Target Start/End: Original strand, 28285540 - 28285674
Alignment:
Q  76 ttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattga 175  Q
    |||||||||||||||| ||||||  |||| |||||||||||||||||||| || ||||| |||||  | ||||| |||||||||||||||||||||||||    
T  28285540 ttgcaatcagctacaacatgacctctcttaccacaccggacacacttcttgatttcttcgggacaggcgttgctcttgtggcctttcccaccacaattga 28285639  T
Q  176 aacacacaatctcagcagcatccttcttcttaggc 210  Q
    | ||||||||||| |||||||||||||||||||||    
T  28285640 agcacacaatctctgcagcatccttcttcttaggc 28285674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 76 - 210
Target Start/End: Complemental strand, 28339125 - 28338991
Alignment:
Q  76 ttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattga 175  Q
    |||||||||||||||| ||||||  |||| |||||||||||||||||||| || ||||| |||||  | ||||| |||||||||||||||||||||||||    
T  28339125 ttgcaatcagctacaacatgacctctcttaccacaccggacacacttcttgatttcttcgggacaggcgttgctcttgtggcctttcccaccacaattga 28339026  T
Q  176 aacacacaatctcagcagcatccttcttcttaggc 210  Q
    | ||||||||||| |||||||||||||||||||||    
T  28339025 agcacacaatctctgcagcatccttcttcttaggc 28338991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 71 - 210
Target Start/End: Complemental strand, 25756799 - 25756657
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||||| ||| |||||||||  |||||||||||| |||||||    
T  25756799 tacgcttgcaatcagctactatatgacccttcttgccgcaccggacacatttctttatctcttctggaaaaacattgcacttgtggcctttctcaccaca 25756700  T
Q  171 attgaaacacacaatct---cagcagcatccttcttcttaggc 210  Q
    ||| ||||| |||||||   ||| |||||||||||||||||||    
T  25756699 attaaaacagacaatctccgcaggagcatccttcttcttaggc 25756657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 16574985 - 16575126
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| ||||||||||| || | |||||| ||||| |||||||||||||||||||| || || ||||||||  | ||||| |||||||||||| |||||    
T  16574985 tgtacgattgcaatcagccaccacatgacctttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgctcttgtggcctttctcacca 16575084  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  16575085 caattgaagcacacaatctctgcagcatccttcttcttaggc 16575126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 69 - 210
Target Start/End: Complemental strand, 16620395 - 16620254
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| ||||||||||| || | |||||| ||||| |||||||||||||||||||| || || ||||||||  | ||||| |||||||||||| |||||    
T  16620395 tgtacgattgcaatcagccaccacatgacctttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgctcttgtggcctttctcacca 16620296  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  16620295 caattgaagcacacaatctctgcagcatccttcttcttaggc 16620254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 28312725 - 28312866
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||| | |||||| ||||||||||||||| |||||||||| || || || | |||  | ||||| |||||||||||| |||||    
T  28312725 tgtacgattgcaatcagctactacatgacctttcttgccacaccgggcacacttcttgatttcctcggaacaggcgttgctcttgtggcctttctcacca 28312824  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  28312825 caattgaagcacacaatctctgcagcatccttcttcttaggc 28312866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 94 - 193
Target Start/End: Complemental strand, 27559130 - 27559031
Alignment:
Q  94 tgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagcag 193  Q
    |||||||||||||||||||||| ||||||||| | ||| |||||||||||| | || |||||||||||| ||||||||||||||||   |||||||||||    
T  27559130 tgacccttcttgccacaccggaaacacttcttcacctcctcaggacaaacagtactcttgtggcctttctcaccacaattgaaacaagtaatctcagcag 27559031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 21764974 - 21765051
Alignment:
Q  136 ggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatct---cagcagcatccttcttcttaggc 210  Q
    |||||||||||||| |||||||||||| |||||||||||||||| |||||||   ||| |||||||||||||||||||    
T  21764974 ggacaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagcatccttcttcttaggc 21765051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 22436988 - 22437108
Alignment:
Q  93 atgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagca 192  Q
    |||||||||||| ||||| |||| |||  |||| | |||  | |||||| ||||||| |||||||||||| |||||||||| || || ||||||||||||    
T  22436988 atgacccttcttaccacatcggaaacatctctttacctcacccggacaagcattgctcttgtggcctttctcaccacaattaaagcagacaatctcagca 22437087  T
Q  193 g---catccttcttcttaggc 210  Q
    |   |||||||||||||||||    
T  22437088 ggaacatccttcttcttaggc 22437108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 28260899 - 28260853
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  28260899 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 28260853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28285017 - 28285063
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  28285017 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 28285063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28312209 - 28312255
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  28312209 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 28312255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 28339648 - 28339602
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  28339648 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 28339602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29590141 - 29590095
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  29590141 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 29590095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 16574469 - 16574515
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||    
T  16574469 cagttgcttcagctgcttagtagataaaaactccgcaccactttcct 16574515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16620911 - 16620865
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||    
T  16620911 cagttgcttcagctgcttagtagataaaaactccgcaccactttcct 16620865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16961184 - 16961138
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  16961184 cagttgcttcagctgcttagtagataagaactctgcaccactttcct 16961138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 18405106 - 18404986
Alignment:
Q  93 atgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatct---ca 189  Q
    |||||||||||| ||||| || | |||| ||||||  ||  |||||||| |||| || |||||||||||| |||||||| ||||||| |||||||   ||    
T  18405106 atgacccttcttaccacagcgaaaacacctcttaacatccccaggacaagcattactcttgtggcctttctcaccacaagtgaaacagacaatctttgca 18405007  T
Q  190 gcagcatccttcttcttaggc 210  Q
    | |||||||||||| ||||||    
T  18405006 ggagcatccttcttgttaggc 18404986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 27190015 - 27190061
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||    
T  27190015 cagttgcttcagctgcttagtagacaaaaactctgcaccactttcct 27190061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 27259225 - 27259179
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||    
T  27259225 cagttgcttcagctgcttagtagacaaaaactctgcaccactttcct 27259179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 16925339 - 16925296
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||| ||||||| |||||||||||    
T  16925339 ttgcttcagctgcttagtagataagaactctgcaccactttcct 16925296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 2872504 - 2872458
Alignment:
Q  2 agttgcttcagctgcttagtagata-aaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||    
T  2872504 agttgcttcagctgcttagtagataaaaaactctgcaccactttcct 2872458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22828057 - 22828011
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||| ||||||||||||||||||||||  |||||||||||    
T  22828057 cagttgcttcacctgcttagtagataaaaactcttcaccactttcct 22828011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24293484 - 24293438
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||| ||||||||||||||||||||||||| | |||||||||||    
T  24293484 cagttgcatcagctgcttagtagataaaaactccgcaccactttcct 24293438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 25115131 - 25115177
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||| |||||||||| || |||||||||||    
T  25115131 cagttgcttcagctgcttagtggataaaaactttgcaccactttcct 25115177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 5836930 - 5836884
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||| ||||||||||| || |||| |||||||||||    
T  5836930 cagttgcttcagctgtttagtagataagaattctgcaccactttcct 5836884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22436448 - 22436494
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||| ||||| || ||||||| |||||||||||    
T  22436448 cagttgcttcagctgcttggtagacaagaactctgcaccactttcct 22436494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 27559671 - 27559625
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||| ||||||||||||||| |||| || |||||||||||    
T  27559671 cagttgcttcacctgcttagtagataagaactttgcaccactttcct 27559625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 1e-61; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 71 - 210
Target Start/End: Original strand, 14683800 - 14683939
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||    
T  14683800 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttgatctcttcaggacagacatagcttttgtggcctttcccaccaca 14683899  T
Q  171 attgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  14683900 attgaaacacacaatctcggtagcatccttcttcttaggc 14683939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 19635368 - 19635508
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| || |||||||| || ||||||||||||||||||||||||||||    
T  19635368 gtacgcttgcattcagctacaatatgacctttcttgccacaccgaacacacttcttgatttcttcagggcatacattgcttttgtggcctttcccaccac 19635467  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  19635468 aattgaaacacacaatctctgcagcatccttcttcttaggc 19635508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 40476272 - 40476412
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||||||||| ||||||||||||||||| |||||||||||| | ||||||||||| || |||||||| || || |||||||||||||||||||||||||    
T  40476272 gtacgcttgcattcagctacaatatgacctttcttgccacactgaacacacttcttgatttcttcagggcagacgttgcttttgtggcctttcccaccac 40476371  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  40476372 aattgaaacacacaatctcagtagcatccttcttcttaggc 40476412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 69 - 210
Target Start/End: Complemental strand, 17091930 - 17091789
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| || || ||||| || || ||||| |||||||||||| |||||    
T  17091930 tgtacggttgcaatcagctacaacatgacccttcttaccacaccggacacacttcttgatttcctcagggcagacgttgctcttgtggcctttctcacca 17091831  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  17091830 caattgaaacacacaatctctgcagcatccttcttcttaggc 17091789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 70 - 210
Target Start/End: Complemental strand, 14300759 - 14300619
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||||||||||||| || || ||| | || || |||||||||||||||||| ||||||    
T  14300759 gtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcaaggcagacgttgcttttgtggcctttctcaccac 14300660  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  14300659 aattgaaacacacaatctctgcagcatccttcttcttaggc 14300619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 73 - 210
Target Start/End: Original strand, 13513585 - 13513725
Alignment:
Q  73 cgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaat 172  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||| | ||||| |    
T  13513585 cgcttgcaatcagctataatatgacccttcttgccacaccggacacatttcttgatctcttcaggacaaacattgctcttgtggcctttctcgccacagt 13513684  T
Q  173 tgaaacacacaatct---cagcagcatccttcttcttaggc 210  Q
    ||||||| |||||||   ||| |||||||||||||||||||    
T  13513685 tgaaacagacaatctctgcaggagcatccttcttcttaggc 13513725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 69 - 209
Target Start/End: Original strand, 8389643 - 8389783
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| || || ||||||||  | ||||| |||||||||||| |||||    
T  8389643 tgtacggttgcaatcagctacaacatgacccttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgctcttgtggcctttctcacca 8389742  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttagg 209  Q
    |||||||| ||||||||||| ||||||||||||||||||||    
T  8389743 caattgaagcacacaatctctgcagcatccttcttcttagg 8389783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 12479831 - 12479972
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||| |||||||||||||||||||||||||| || || ||||| || || ||||| || ||||||||| |||||    
T  12479831 tgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgctcttatggcctttctcacca 12479930  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| |||||||||||| ||||||||    
T  12479931 caattgaaacacacaatctctgcagcatccttcctcttaggc 12479972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 27714568 - 27714708
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||||||||||||| || || ||||| ||  | ||||| |||||||||||| ||||||    
T  27714568 gtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcaggcgttgctcttgtggcctttctcaccac 27714667  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||| ||||||||||| |||||||||||||||||||||    
T  27714668 aattgaagcacacaatctctgcagcatccttcttcttaggc 27714708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 69 - 210
Target Start/End: Complemental strand, 8050404 - 8050263
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||| |||||||||||||| ||||||||||| || || ||||| || || ||||| |||||||| ||| |||||    
T  8050404 tgtacgattgcaatcagctacaacatgacctttcttgccacaccgaacacacttcttgatttcctcagggcagacgttgctcttgtggcccttctcacca 8050305  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| ||||||||| |||||||||||    
T  8050304 caattgaaacacacaatctctgcagcatccctcttcttaggc 8050263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 69 - 210
Target Start/End: Complemental strand, 19775574 - 19775433
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||| ||||| |||||||||||||||||||| || || ||||| ||  | ||||| |||||||||||| |||||    
T  19775574 tgtacgattgcaatcagctacaacatgacctttcttaccacaccggacacacttcttgatttcctcagggcaggcgttgctcttgtggcctttctcacca 19775475  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  19775474 caattgaatcacacaatctctgcagcatccttcttcttaggc 19775433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 23958978 - 23959119
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||| ||||| |||||||||||||||||||| || || ||||| ||  | ||||| |||||||||||| |||||    
T  23958978 tgtacgattgcaatcagctacaacatgacctttcttaccacaccggacacacttcttgatttcctcagggcaggcgttgctcttgtggcctttctcacca 23959077  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  23959078 caattgaagcacacaatctctgcagcatccttcttcttaggc 23959119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 69 - 210
Target Start/End: Complemental strand, 16233773 - 16233632
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| ||||||||||| || | |||||||||||| |||||||||||||||||||| || || ||||||||  | ||||| |||||||||||| |||||    
T  16233773 tgtacggttgcaatcagccaccacatgacccttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgctcttgtggcctttctcacca 16233674  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||  |||||||||| |||||||||||||||||||||    
T  16233673 caattgaagtacacaatctctgcagcatccttcttcttaggc 16233632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 73 - 210
Target Start/End: Complemental strand, 18604596 - 18604456
Alignment:
Q  73 cgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaat 172  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| |||||||||||||||||||| || |||||||||||| | ||||| |    
T  18604596 cgcttgcaatcagctacaataagaccctttttgccacaccggacacatttcttgatctcttcaggacaaacattactcttgtggcctttctcgccacagt 18604497  T
Q  173 tgaaacacacaatctc---agcagcatccttcttcttaggc 210  Q
    | ||||| | ||||||   || |||||||||||||||||||    
T  18604496 taaaacaaataatctccgaaggagcatccttcttcttaggc 18604456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 87 - 210
Target Start/End: Complemental strand, 18224236 - 18224110
Alignment:
Q  87 tacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatc 186  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |  |||||||||||| | ||||| |||||||| ||||||    
T  18224236 tacaatatgacccttcttgccacaccggacacatttcttgatctcttcaggacaaacattacacttgtggcctttctcgccacagttgaaacaaacaatc 18224137  T
Q  187 t---cagcagcatccttcttcttaggc 210  Q
    |   ||| |||||||||||||||||||    
T  18224136 tccgcaggagcatccttcttcttaggc 18224110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 141
Target Start/End: Complemental strand, 16250629 - 16250559
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaa 141  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||  |||||||    
T  16250629 tacgcttgcaatcaactacaatatgacccttcttgccacaccggacacatttcttgatctctataggacaa 16250559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 8050920 - 8050874
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  8050920 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 8050874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8389127 - 8389173
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  8389127 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 8389173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12479315 - 12479361
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  12479315 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 12479361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16234289 - 16234243
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  16234289 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 16234243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 17092446 - 17092400
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  17092446 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 17092400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 19776090 - 19776044
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  19776090 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 19776044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23958462 - 23958508
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  23958462 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 23958508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 27714051 - 27714097
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  27714051 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 27714097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 14301276 - 14301230
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||    
T  14301276 cagttgcttcagctgcttagtagataaaaactccgcaccactttcct 14301230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 19634851 - 19634897
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||||||||||| || |||||||||||    
T  19634851 cagttgcttcagctgcttagtagataaaaactttgcaccactttcct 19634897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 40475755 - 40475801
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||    
T  40475755 cagttgcttcagctgcttagtagatacaaactctgcaccactttcct 40475801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 14683285 - 14683328
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||| ||||||| |||||||||||    
T  14683285 ttgcttcagctgcttagtagataagaactctgcaccactttcct 14683328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 18224740 - 18224697
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||| ||||||| |||||||||||    
T  18224740 ttgcttcagctgcttagtagataagaactctgcaccactttcct 18224697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16352827 - 16352781
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||| || ||||||| |||||||||||    
T  16352827 cagttgcttcagctgcttagtagacaagaactctgcaccactttcct 16352781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 193
Target Start/End: Original strand, 7357569 - 7357622
Alignment:
Q  140 aaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagcag 193  Q
    |||||||||| |||||||||||| ||||||  ||| |||| |||||||||||||    
T  7357569 aaacattgctcttgtggcctttctcaccactcttgtaacaaacaatctcagcag 7357622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 16248388 - 16248313
Alignment:
Q  138 acaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctca---gcagcatccttcttcttaggc 210  Q
    ||||||||| || |||||||||||| ||||| ||||||||||   |||||||   | |||||||||||||||||||    
T  16248388 acaaacattactcttgtggcctttctcaccataattgaaacatgtaatctcagttggagcatccttcttcttaggc 16248313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 11204204 - 11204152
Alignment:
Q  138 acaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcag 190  Q
    |||||||||||| |||||||||||| ||||||| ||  |||| ||||||||||    
T  11204204 acaaacattgctcttgtggcctttctcaccacacttataacaaacaatctcag 11204152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 116; Significance: 3e-59; HSPs: 2)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 71 - 210
Target Start/End: Original strand, 8520 - 8659
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||    
T  8520 tacgcttgcaatcagctacaatatgacccttcttgccacactggacacacttcttgatctcttcaggacagacattgcttttgtggcctctcccaccaca 8619  T
Q  171 attgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  8620 attgaaacacacaatctcggtagcatccttcttcttaggc 8659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 8005 - 8048
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||    
T  8005 ttgcttcagctgcttagtagataagaactctgcaccactatcct 8048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 3e-59; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 71 - 210
Target Start/End: Original strand, 12690723 - 12690862
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| |||||||    
T  12690723 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttgatctcttcaggacagacattgcttttgtggactttcacaccaca 12690822  T
Q  171 attgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  12690823 attgaaacacacaatctcggtagcatccttcttcttaggc 12690862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 71 - 210
Target Start/End: Original strand, 14957730 - 14957869
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||    
T  14957730 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttgatctcttcaggacagacattgcttttgtggcctttcacaccaca 14957829  T
Q  171 attgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||| | || ||||||||||||||||    
T  14957830 attgaaacacacaatctcggtagtatccttcttcttaggc 14957869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 71 - 210
Target Start/End: Complemental strand, 11550150 - 11550011
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||    
T  11550150 tacgcttgcaatcaactacaatatgacccttcttgccacaccagacacacttcttgatctcttcaggacagacattgcttttgtggcctttcacaccaca 11550051  T
Q  171 attgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  11550050 attgaaacacacaatctcggtagcatccttcttcttaggc 11550011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 70 - 210
Target Start/End: Complemental strand, 11234262 - 11234122
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| || |||||||| || || |||||||||||||||||||||||||    
T  11234262 gtacgcttgcattcagctacaatatgacctttcttgccacaccgaacacacttcttgatttcttcagggcagacgttgcttttgtggcctttcccaccac 11234163  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||| | |||||||||||||||||||    
T  11234162 aattgaaacacacaatctctgtagcatccttcttcttaggc 11234122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 71 - 210
Target Start/End: Original strand, 11984214 - 11984356
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||| |||||||||||| |||||||    
T  11984214 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacatttcttgatctcttcagtacaaacattgctcttgtggcctttctcaccaca 11984313  T
Q  171 attgaaacacacaatctcagc---agcatccttcttcttaggc 210  Q
    |||||||||   |||||||||   |||||||||||||||||||    
T  11984314 attgaaacaagtaatctcagctggagcatccttcttcttaggc 11984356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 13689262 - 13689402
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||||||||||||| || || ||||| || || |||||||||||||||||| ||||||    
T  13689262 gtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccac 13689361  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  13689362 aattgaaacacacaatctctgcagcatccttcttcttaggc 13689402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 70 - 210
Target Start/End: Complemental strand, 15158106 - 15157966
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||||||||||||| || || ||||| || || |||||||||||||||||| ||||||    
T  15158106 gtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccac 15158007  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  15158006 aattgaaacacacaatctctgcagcatccttcttcttaggc 15157966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 8710825 - 8710966
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||| ||||| |||||||||||||||||||| || || ||||||||  | |||||||||||||||||| |||||    
T  8710825 tgtacgattgcaatcagctacaacatgacctttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgcttttgtggcctttctcacca 8710924  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  8710925 caattgaaacacacaatctctgcagcatccttcttcttaggc 8710966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 18180964 - 18181104
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||||||||||||| || || ||||| || |||||||||| |||||||||| | ||||    
T  18180964 gtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacattgctttcgtggcctttctcgccac 18181063  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  18181064 aattgaaacacacaatctctgcagcatccttcttcttaggc 18181104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 73 - 210
Target Start/End: Original strand, 9591588 - 9591728
Alignment:
Q  73 cgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaat 172  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||| | ||||| |    
T  9591588 cgcttgcaatcagctataatatgacccttcttgccacaccggacacatttcttgatctcttcaggacaaacattgctcttgtggcctttctcgccacagt 9591687  T
Q  173 tgaaacacacaatct---cagcagcatccttcttcttaggc 210  Q
    ||||||| |||||||   ||| |||||||||||||||||||    
T  9591688 tgaaacagacaatctctgcaggagcatccttcttcttaggc 9591728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 14335616 - 14335757
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| ||||||||||| || | |||||||||||| |||||||||||||||||||| || || ||||||||  | ||||| |||||||||||| |||||    
T  14335616 tgtacgattgcaatcagccaccacatgacccttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgctcttgtggcctttctcacca 14335715  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  14335716 caattgaagcacacaatctctgcagcatccttcttcttaggc 14335757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 71 - 206
Target Start/End: Complemental strand, 16726489 - 16726351
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||| || |||||||||||||| |||||    
T  16726489 tacgcttgcaatcagctacaatatgaccctttttgccacatcggacacatttcttgatctcttcaggacaaacattactcttgtggcctttcccgccaca 16726390  T
Q  171 attgaaacacacaat---ctcagcagcatccttcttctt 206  Q
     |||||||| |||||   | ||| |||||||||||||||    
T  16726389 gttgaaacaaacaatatccgcaggagcatccttcttctt 16726351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 71 - 206
Target Start/End: Complemental strand, 17703503 - 17703365
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||| || |||||||||||||| |||||    
T  17703503 tacgcttgcaatcagctacaatatgaccctttttgccacatcggacacatttcttgatctcttcaggacaaacattactcttgtggcctttcccgccaca 17703404  T
Q  171 attgaaacacacaat---ctcagcagcatccttcttctt 206  Q
     |||||||| |||||   | ||| |||||||||||||||    
T  17703403 gttgaaacaaacaatatccgcaggagcatccttcttctt 17703365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 10873681 - 10873822
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| ||||||||||| || | |||||||||||| |||||||||||||||||||| || || ||||||||  | ||||| |||||| ||||| |||||    
T  10873681 tgtacgattgcaatcagccaccacatgacccttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgctcttgtggtctttctcacca 10873780  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  10873781 caattgaagcacacaatctctgcagcatccttcttcttaggc 10873822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 69 - 210
Target Start/End: Complemental strand, 44788401 - 44788260
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| ||||||||||| || | |||||||||||| |||||||||||||||||||| || || ||||||||  | ||||| |||||||||||| | |||    
T  44788401 tgtacggttgcaatcagccaccacatgacccttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgctcttgtggcctttctcgcca 44788302  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  44788301 caattgaagcacacaatctctgcagcatccttcttcttaggc 44788260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 70 - 210
Target Start/End: Complemental strand, 18587220 - 18587080
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||| ||||||||||| || | |||||||||||| |||||||||||||||||||| || || ||||||||  | ||||| |||||||||||| ||||||    
T  18587220 gtacgattgcaatcagccaccacatgacccttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgctcttgtggcctttctcaccac 18587121  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||| ||||||||||| | |||||||||||||||||||    
T  18587120 aattgaagcacacaatctctgtagcatccttcttcttaggc 18587080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8200752 - 8200798
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  8200752 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 8200798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8710309 - 8710355
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  8710309 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 8710355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10873394 - 10873440
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  10873394 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 10873440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11234779 - 11234733
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  11234779 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 11234733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 14150002 - 14149956
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  14150002 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 14149956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14335100 - 14335146
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  14335100 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 14335146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18587737 - 18587691
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  18587737 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 18587691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44788917 - 44788871
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  44788917 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 44788871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13688745 - 13688791
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||    
T  13688745 cagttgcttcagctgcttagtagataaaaactccgcaccactttcct 13688791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15158623 - 15158577
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||    
T  15158623 cagttgcttcagctgcttagtagataaaaactccgcaccactttcct 15158577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 9591075 - 9591118
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||| ||||||| |||||||||||    
T  9591075 ttgcttcagctgcttagtagataagaactctgcaccactttcct 9591118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 11550665 - 11550622
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||| ||||||| |||||||||||    
T  11550665 ttgcttcagctgcttagtagataagaactctgcaccactttcct 11550622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 14957261 - 14957304
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||| ||||||| |||||||||||    
T  14957261 ttgcttcagctgcttagtagataagaactctgcaccactttcct 14957304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 15146450 - 15146415
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctgg 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  15146450 cagttgcttcagctgcttagtagacaaaaactctgg 15146415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 16726946 - 16726903
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||    
T  16726946 ttgcttcagcttcttagtagataagaactctgcaccactttcct 16726903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 17704018 - 17703975
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||    
T  17704018 ttgcttcagcttcttagtagataagaactctgcaccactttcct 17703975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 191
Target Start/End: Complemental strand, 26115615 - 26115496
Alignment:
Q  72 acgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttctta--atctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||||||| ||||||| | | ||||||||||  ||||||| ||  |||||| ||  ||||||||   ||||||||| || |||||||||||| ||||||    
T  26115615 acgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttcc--acaaacattactcttgtggcctttctcaccac 26115518  T
Q  170 aattgaaacacacaatctcagc 191  Q
    | ||| |||| |||||||||||    
T  26115517 acttgtaacaaacaatctcagc 26115496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 12690209 - 12690246
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccac 41  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  12690209 ttgcttcagctgcttagtagataagaactctgcaccac 12690246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 49155525 - 49155642
Alignment:
Q  72 acgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttctta--atctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||||||| ||||||| | ||||||||||||  ||||||| ||  |||||| ||  ||||||||   ||||||||| || |||||||||||| ||||||    
T  49155525 acgcttgcattcagctaaactatgacccttctgaccacacctgaagcacttcctatcatctcttcc--acaaacattactcttgtggcctttctcaccac 49155622  T
Q  170 aattgaaacacacaatctca 189  Q
    | ||| | || |||||||||    
T  49155623 acttgtagcaaacaatctca 49155642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 21755702 - 21755754
Alignment:
Q  138 acaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcag 190  Q
    |||||||||||| |||||||||||  ||||||| ||| |||| ||||||||||    
T  21755702 acaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcag 21755754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 110; Significance: 1e-55; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 18859874 - 18860015
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| || |||||||| || |||||||||||||||||||||||||||    
T  18859874 tgtacgcttgcattcagctacaatatgacctttcttgccacaccgaacacacttcttgatttcttcagggcatacattgcttttgtggcctttcccacca 18859973  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  18859974 caattgaaacacacaatctctgcagcatccttcttcttaggc 18860015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 69 - 210
Target Start/End: Complemental strand, 17671506 - 17671365
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||| ||||||||||||| |||||||||||| || || || || || ||||||||||||||||||||| |||||    
T  17671506 tgtacgattgcaatcagctacaacatgacctttcttgccacaccagacacacttcttgatttcctccgggcagacattgcttttgtggcctttctcacca 17671407  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  17671406 caattgaaacacacaatctctgcagcatccttcttcttaggc 17671365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 69 - 210
Target Start/End: Complemental strand, 22126443 - 22126302
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| || |||||| |  | || ||||||||||||||||||||||||    
T  22126443 tgtacgcttgcattcagctacaatatgacctttcttgccacaccgaacacacttcttgatttcttcaaggaagacgttgcttttgtggcctttcccacca 22126344  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| | |||||||||||||||||||    
T  22126343 caattgaaacacacaatctctgtagcatccttcttcttaggc 22126302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 70 - 210
Target Start/End: Complemental strand, 22117658 - 22117518
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| || |||||||| || || |||||||||||||||||||||||||    
T  22117658 gtacgcttgcattcagctacaatatgacctttcttgccacaccgaacacacttcttgatttcttcagggcagacgttgcttttgtggcctttcccaccac 22117559  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
     ||||||||||||||||||   ||||||||| |||||||||    
T  22117558 gattgaaacacacaatctctatagcatccttattcttaggc 22117518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 75 - 209
Target Start/End: Original strand, 32603448 - 32603585
Alignment:
Q  75 cttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattg 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| || |||||||||||||||||||| |||    
T  32603448 cttgcaatcagctacaatatgacccttcttgccacaccggacacatttcttgatctcttcaagacaaacattactcttgtggcctttcccaccacagttg 32603547  T
Q  175 aaacacacaatctc---agcagcatccttcttcttagg 209  Q
    ||||| ||||| ||   || ||||||||||||||||||    
T  32603548 aaacaaacaatttccgaaggagcatccttcttcttagg 32603585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 71 - 210
Target Start/End: Original strand, 22031402 - 22031543
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||| || ||||||||  |||||||    
T  22031402 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacatttctttatctctttaggacaaacattgctcttatggccttt-tcaccaca 22031500  T
Q  171 attgaaacacacaatctcagc---agcatccttcttcttaggc 210  Q
    |||||||||   |||||||||   |||||||||||||||||||    
T  22031501 attgaaacaagtaatctcagctggagcatccttcttcttaggc 22031543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 71 - 210
Target Start/End: Original strand, 22043126 - 22043268
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| || |||||||||||| |||||||    
T  22043126 tacgcttgcaatcagctacaatatgacccttcttgccacaccgaacacatttcttgatctcttctggacaaacattactcttgtggcctttctcaccaca 22043225  T
Q  171 attgaaacacacaatctca---gcagcatccttcttcttaggc 210  Q
    |||||||||   |||||||   | |||||||||||||||||||    
T  22043226 attgaaacaagtaatctcagttggagcatccttcttcttaggc 22043268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 76 - 210
Target Start/End: Complemental strand, 19481549 - 19481415
Alignment:
Q  76 ttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattga 175  Q
    |||||||||||||| | |||||||||||| |||||||||||||||||||| || || |||| |||  | ||||| |||||||||||| ||||||||||||    
T  19481549 ttgcaatcagctacgacatgacccttcttaccacaccggacacacttcttgatttcctcagaacaggcgttgctcttgtggcctttctcaccacaattga 19481450  T
Q  176 aacacacaatctcagcagcatccttcttcttaggc 210  Q
    | ||||||||||| |||||||||||||||||||||    
T  19481449 agcacacaatctctgcagcatccttcttcttaggc 19481415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 73 - 206
Target Start/End: Complemental strand, 30310624 - 30310488
Alignment:
Q  73 cgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaat 172  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||| || |||||||||||| | ||||| |    
T  30310624 cgcttgcaatcagctacaatatgacccttcttgccacaccagacacatttcttgatctcttcaggacaaacattactcttgtggcctttctcgccacagt 30310525  T
Q  173 tgaaacacacaat---ctcagcagcatccttcttctt 206  Q
    ||||||| |||||   | ||| |||||||||||||||    
T  30310524 tgaaacaaacaatatccgcaggagcatccttcttctt 30310488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 69 - 210
Target Start/End: Complemental strand, 20015747 - 20015606
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||| |||||||||||||| ||||||||||| || || ||||| || || || || |||||||| ||| |||||    
T  20015747 tgtacgattgcaatcagctacaacatgacctttcttgccacaccgaacacacttcttgatttcctcagggcagacgttactcttgtggcccttctcacca 20015648  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| ||||||||| |||||||||||    
T  20015647 caattgaaacacacaatctctgcagcatccctcttcttaggc 20015606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 73 - 210
Target Start/End: Original strand, 15536684 - 15536824
Alignment:
Q  73 cgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaat 172  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||| |||||||||||| || ||||||||||   | |||||||    
T  15536684 cgcttgcaatcagctacaatatgaccctttttgccacaccggacacatttcttgatctctttaggacaaacattactcttgtggccttcttcgccacaat 15536783  T
Q  173 tgaaacacacaatctc---agcagcatccttcttcttaggc 210  Q
    | ||||| | ||||||   || |||||||||||||||||||    
T  15536784 taaaacaaataatctccgaaggagcatccttcttcttaggc 15536824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 19115697 - 19115838
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| ||||||||||| || | |||||||||||| ||||||||||| |||||||| || || ||||||||  | ||||| |||||||||||| | |||    
T  19115697 tgtacgattgcaatcagccaccacatgacccttcttaccacaccggacgcacttcttgatttcctcaggacaggcgttgctcttgtggcctttctcgcca 19115796  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||| ||||||| ||| |||||||||||||||||||||    
T  19115797 caattgaagcacacaacctctgcagcatccttcttcttaggc 19115838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 17672022 - 17671976
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  17672022 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 17671976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 19115181 - 19115227
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  19115181 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 19115227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 19482072 - 19482026
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  19482072 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 19482026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20016263 - 20016217
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  20016263 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 20016217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22126959 - 22126913
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  22126959 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 22126913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22118175 - 22118129
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||    
T  22118175 cagttgcttcagctgcttagtagataaaaactccgcaccactttcct 22118129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 15536167 - 15536210
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||| ||||||| |||||||||||    
T  15536167 ttgcttcagctgcttagtagataagaactctgcaccactttcct 15536210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 22030887 - 22030930
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||| || |||||||||||    
T  22030887 ttgcttcagctgcttagtagataaaaactatgcaccactttcct 22030930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 30311141 - 30311098
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||| ||||||| |||||||||||    
T  30311141 ttgcttcagctgcttagtagataagaactctgcaccactttcct 30311098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 18859358 - 18859404
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||| || |||||||||| |||||||||||    
T  18859358 cagttgcttcagctgcttagttgacaaaaactctgcaccactttcct 18859404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 21391857 - 21391815
Alignment:
Q  5 tgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||| |||||||||| |||||||||||    
T  21391857 tgcttcagctgcttagtagacaaaaactctgcaccactttcct 21391815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 21781183 - 21781141
Alignment:
Q  5 tgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||| |||||||||| |||||||||||    
T  21781183 tgcttcagctgcttagtagacaaaaactctgcaccactttcct 21781141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 21786351 - 21786309
Alignment:
Q  5 tgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||| |||||||||| |||||||||||    
T  21786351 tgcttcagctgcttagtagacaaaaactctgcaccactttcct 21786309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 21163961 - 21163890
Alignment:
Q  122 tcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagcag 193  Q
    |||| |||||| || ||||| ||||||| |||||| ||||| | |||||||| ||||| |||||||||||||    
T  21163961 tctttatctctccatgacaagcattgctcttgtggtctttctcgccacaattaaaacagacaatctcagcag 21163890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 21164535 - 21164492
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||| || ||||||| |||||||||||    
T  21164535 ttgcttcagctgcttagtagacaagaactctgcaccactttcct 21164492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 22042611 - 22042654
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||| ||| ||||||| |||||||||||    
T  22042611 ttgcttcagctgcttagtagttaagaactctgcaccactttcct 22042654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 22129614 - 22129571
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||| || |||| |||||||||||    
T  22129614 ttgcttcagctgcttagtagataagaattctgcaccactttcct 22129571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 19980748 - 19980794
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||| ||||| || ||||||| |||||||||||    
T  19980748 cagttgcttcagctgcttggtagacaagaactctgcaccactttcct 19980794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 21253730 - 21253772
Alignment:
Q  5 tgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||| ||||||||||  ||||||||||    
T  21253730 tgcttcagctgcttagtagacaaaaactctgcgccactttcct 21253772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 21920100 - 21920058
Alignment:
Q  5 tgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||| ||||||||||  ||||||||||    
T  21920100 tgcttcagctgcttagtagacaaaaactctgcgccactttcct 21920058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 18881076 - 18880997
Alignment:
Q  134 caggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatct---cagcagcatccttcttcttaggc 210  Q
    |||||||| |||| || |||||||||||| |||||||| | ||||| ||||| |   ||| |||||||||||||||||||    
T  18881076 caggacaagcattactcttgtggcctttctcaccacaagtaaaacagacaatttttgcaggagcatccttcttcttaggc 18880997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 19981331 - 19981388
Alignment:
Q  136 ggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagcag 193  Q
    |||||| ||||||| |||||||||||| |||||||||| ||  | |||||||||||||    
T  19981331 ggacaagcattgctcttgtggcctttctcaccacaattaaagaagacaatctcagcag 19981388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 28984211 - 28984328
Alignment:
Q  72 acgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttctta--atctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||||||| ||||||| | | ||||||||||  ||||||| ||  |||||| ||  ||||||||   ||||||||| || |||||||||||| ||||||    
T  28984211 acgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttcc--acaaacattactcttgtggcctttctcaccac 28984308  T
Q  170 aattgaaacacacaatctca 189  Q
    | ||| |||| |||||||||    
T  28984309 acttgtaacaaacaatctca 28984328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 16268639 - 16268587
Alignment:
Q  138 acaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcag 190  Q
    ||||||||| || |||||||||||| ||||||| ||| |||| ||||||||||    
T  16268639 acaaacattactcttgtggcctttctcaccacacttgtaacaaacaatctcag 16268587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 109; Significance: 5e-55; HSPs: 2)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 10629 - 10769
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || || ||||| || ||||||||||||||||||||||||||||    
T  10629 gtacgcttgcattcagctacaatatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacattgcttttgtggcctttcccaccac 10728  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  10729 aattgaaacacacaatctcagtagcatccttcttcttaggc 10769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10112 - 10158
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  10112 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 10158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 8e-54; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 72 - 210
Target Start/End: Complemental strand, 21139559 - 21139421
Alignment:
Q  72 acgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaa 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||| |||| |||||||||||||||||||| |||||||||    
T  21139559 acgcttgcaatcagctacaatatgacccttcttgccacaccggacacggttcttgatctcttcacgacagacattgcttttgtggccttttccaccacaa 21139460  T
Q  172 ttgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  21139459 ttgaaacacacaatctctgtagcatccttcttcttaggc 21139421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 70 - 210
Target Start/End: Complemental strand, 24874330 - 24874190
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||| | || ||||||||||||||||||||||||||||    
T  24874330 gtacgcttgcaatcagctacaatatgacctttcttgccacaccggacacatttcttaatttcttcatggcagacattgcttttgtggcctttcccaccac 24874231  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    | ||||||||||||||||||| | |||||||||||||||||    
T  24874230 agttgaaacacacaatctcagtaacatccttcttcttaggc 24874190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 24712896 - 24713037
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||| |||||||||||||||||||||||||| || || ||||| || || |||||||||||||||||| |||||    
T  24712896 tgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcacca 24712995  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  24712996 caattgaaacacacaatctctgcagcatccttcttcttaggc 24713037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 24265233 - 24265373
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||||||||||||| || || ||||| || || |||||||||||||||||| ||||||    
T  24265233 gtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccac 24265332  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  24265333 aattgaaacacacaatctctgcagcatccttcttcttaggc 24265373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 9338444 - 9338585
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| || || ||||| || || ||||| |||||||||||| |||||    
T  9338444 tgtacggttgcaatcagctacaacatgacccttcttaccacaccggacacacttcttgatttcctcagggcagacgttgctcttgtggcctttctcacca 9338543  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  9338544 caattgaaacacacaatctctgcagcatccttcttcttaggc 9338585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 9487078 - 9487219
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| || || ||||| || || ||||| |||||||||||| |||||    
T  9487078 tgtacggttgcaatcagctacaacatgacccttcttaccacaccggacacacttcttgatttcctcagggcagacgttgctcttgtggcctttctcacca 9487177  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  9487178 caattgaaacacacaatctctgcagcatccttcttcttaggc 9487219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 69 - 210
Target Start/End: Complemental strand, 22322923 - 22322782
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| ||||||||||||| || |||||| |||||||||||||||||||||||||| || || ||||| || || |||||||||||||||||| |||||    
T  22322923 tgtacgattgcaatcagctataacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcacca 22322824  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  22322823 caattgaaacacacaatctccgcagcatccttcttcttaggc 22322782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 76 - 210
Target Start/End: Original strand, 10871719 - 10871853
Alignment:
Q  76 ttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattga 175  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||| || || ||||| || || |||||||||||||||||| ||||||||||||    
T  10871719 ttgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccacaattga 10871818  T
Q  176 aacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||| ||| |||||||||||||||||||||    
T  10871819 aacacacaagctctgcagcatccttcttcttaggc 10871853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 16984102 - 16984243
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| || || ||||| || || ||||| |||||||||||| |||||    
T  16984102 tgtacggttgcaatcagctacaacatgacccttcttaccacaccggacacacttcttgatttcctcagggcagacgttgctcttgtggcctttctcacca 16984201  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| ||||||| |||||||||||||    
T  16984202 caattgaaacacacaatctctgcagcattcttcttcttaggc 16984243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 71 - 210
Target Start/End: Complemental strand, 22463060 - 22462918
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| || |||||||||||| |||||||    
T  22463060 tacgcttgcaatcagctacgatatgacccttcttgccacactggacacatttcttgatctcttcaggacaaacattactcttgtggcctttctcaccaca 22462961  T
Q  171 attgaaacacacaatct---cagcagcatccttcttcttaggc 210  Q
     |||||||| |||||||   ||| |||||||||||||||||||    
T  22462960 gttgaaacaaacaatctccgcaggagcatccttcttcttaggc 22462918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 74 - 210
Target Start/End: Complemental strand, 23116635 - 23116496
Alignment:
Q  74 gcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaatt 173  Q
    |||||||||||||||| ||||||||| |||||| |||||||||||| ||||| |||||||||||||||||||| || |||||||||||||| ||||| ||    
T  23116635 gcttgcaatcagctacgatatgacccctcttgctacaccggacacatttcttgatctcttcaggacaaacattactcttgtggcctttcccgccacagtt 23116536  T
Q  174 gaaacacacaatctc---agcagcatccttcttcttaggc 210  Q
    |||||| ||||||||   || |||||||||||||||||||    
T  23116535 gaaacaaacaatctctgaaggagcatccttcttcttaggc 23116496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 27374131 - 27374272
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||| | |||||| ||||| |||||||||||||||||||| || || ||||||||  | ||||| |||||||||||| |||||    
T  27374131 tgtacgattgcaatcagctaccacatgacctttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgctcttgtggcctttctcacca 27374230  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  27374231 caattgaagcacacaatctctgcagcatccttcttcttaggc 27374272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 75 - 210
Target Start/End: Original strand, 23205182 - 23205320
Alignment:
Q  75 cttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattg 174  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| || |||||||||||| | ||||| |||    
T  23205182 cttgcaatcagctacaatatgacccttcttgccacactggacacatttcttgatctcttcaggacaaacattactcttgtggcctttctcgccacagttg 23205281  T
Q  175 aaacacacaatctc---agcagcatccttcttcttaggc 210  Q
    ||||| ||||||||   || ||||| |||||||||||||    
T  23205282 aaacaaacaatctccgaaggagcattcttcttcttaggc 23205320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 75 - 210
Target Start/End: Original strand, 23676786 - 23676924
Alignment:
Q  75 cttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattg 174  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| || |||||||||||| | ||||| |||    
T  23676786 cttgcaatcagctacaatatgacccttcttgccacactggacacatttcttgatctcttcaggacaaacattactcttgtggcctttctcgccacagttg 23676885  T
Q  175 aaacacacaatctc---agcagcatccttcttcttaggc 210  Q
    ||||| ||||||||   || ||||| |||||||||||||    
T  23676886 aaacaaacaatctccgaaggagcattcttcttcttaggc 23676924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 70 - 210
Target Start/End: Complemental strand, 44383150 - 44383010
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||| |||||||||||||||| |||||| ||||| |||||||||||||||||||| || || ||||| ||  ||||||| |||||||||||| ||||||    
T  44383150 gtacgattgcaatcagctacaacatgacctttcttaccacaccggacacacttcttgatttcctcagggcaggcattgctcttgtggcctttctcaccac 44383051  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||| ||||||||||| ||| |||||||||||||||||    
T  44383050 aattgaagcacacaatctctgcaacatccttcttcttaggc 44383010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 17001862 - 17002003
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| ||||||||||| || | |||||||||||| |||||||||||||||||||| || || ||||||||  | ||||| |||||||||||| | |||    
T  17001862 tgtacggttgcaatcagccaccacatgacccttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgctcttgtggcctttctcgcca 17001961  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  17001962 caattgaagcacacaatctctgcagcatccttcttcttaggc 17002003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 71 - 209
Target Start/End: Complemental strand, 24705061 - 24704920
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    |||||||||||||||||| | | |||||||||||||||||| ||| ||| ||||| | ||| ||||||||||||||||| |||||||||||| |||||||    
T  24705061 tacgcttgcaatcagctaaagtgtgacccttcttgccacactggaaacatttctttacctcctcaggacaaacattgctcttgtggcctttctcaccaca 24704962  T
Q  171 attgaaacacacaatctcagcag---catccttcttcttagg 209  Q
    ||||||||| | |||||||||||   ||||||||||||||||    
T  24704961 attgaaacagataatctcagcaggaacatccttcttcttagg 24704920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 76 - 210
Target Start/End: Complemental strand, 24657232 - 24657095
Alignment:
Q  76 ttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattga 175  Q
    |||||||||||||   | |||||||||||||||||||||| ||||||||| | ||| |||||||||||| | || |||||||||||| ||||||||||||    
T  24657232 ttgcaatcagctaatgtgtgacccttcttgccacaccggaaacacttcttcacctcctcaggacaaacagtactcttgtggcctttctcaccacaattga 24657133  T
Q  176 aacacacaatctcagcag---catccttcttcttaggc 210  Q
    ||||   |||||||||||   ||||||| |||||||||    
T  24657132 aacaagtaatctcagcaggaacatcctttttcttaggc 24657095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 74 - 193
Target Start/End: Complemental strand, 11351287 - 11351168
Alignment:
Q  74 gcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaatt 173  Q
    |||||||||||||||   ||||||||||||||||||||| || ||| ||||  | ||| |  |||||||||||||| |||||||||||| ||||||||||    
T  11351287 gcttgcaatcagctaatgtatgacccttcttgccacaccagaaacatttctctacctcctttggacaaacattgctcttgtggcctttctcaccacaatt 11351188  T
Q  174 gaaacacacaatctcagcag 193  Q
    |||||| |||||||| ||||    
T  11351187 gaaacagacaatctccgcag 11351168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 71 - 210
Target Start/End: Original strand, 24678351 - 24678493
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    |||||||||| |||||||    |||||||||||| ||||| |||| |||  |||||| |||| | |||||| ||||||| |||||||||||| |||||||    
T  24678351 tacgcttgcactcagctagtgcatgacccttcttaccacaacggaaacatctcttaacctctcccggacaagcattgctcttgtggcctttctcaccaca 24678450  T
Q  171 attgaaacacacaatctcagcag---catccttcttcttaggc 210  Q
    ||| || || |||||||||||||   |||||||||||||||||    
T  24678451 attaaagcagacaatctcagcaggaacatccttcttcttaggc 24678493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9337928 - 9337974
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  9337928 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 9337974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9486562 - 9486608
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  9486562 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 9486608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 16983586 - 16983632
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  16983586 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 16983632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 17001346 - 17001392
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  17001346 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 17001392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 21143138 - 21143092
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  21143138 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 21143092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22323439 - 22323393
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  22323439 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 22323393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 27220362 - 27220408
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  27220362 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 27220408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 27373615 - 27373661
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  27373615 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 27373661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 76 - 193
Target Start/End: Complemental strand, 23029035 - 23028919
Alignment:
Q  76 ttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattga 175  Q
    |||||||||||||    |||||||||||| ||||| |||| |||  |||| | |||| |||||||| ||||||| |||||||||||| |||||||| | |    
T  23029035 ttgcaatcagctagtgcatgacccttcttaccacatcggaaacatctctttacctctccaggacaagcattgctcttgtggcctttctcaccacaa-taa 23028937  T
Q  176 aacacacaatctcagcag 193  Q
    |||| |||||||||||||    
T  23028936 aacagacaatctcagcag 23028919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 136 - 210
Target Start/End: Complemental strand, 21320517 - 21320440
Alignment:
Q  136 ggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagcag---catccttcttcttaggc 210  Q
    |||||| ||||||| |||||||||||| | |||||||| ||||| |||||||||||||   |||||||||||||||||    
T  21320517 ggacaagcattgctcttgtggcctttctcgccacaattaaaacagacaatctcagcagggacatccttcttcttaggc 21320440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10871196 - 10871242
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||    
T  10871196 cagttgcttcagctgcttagtagataaaaactccgcaccactttcct 10871242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24712380 - 24712426
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  24712380 cagttgcttcagctgcttagtagataaaaactctgcaccactctcct 24712426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24874847 - 24874801
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  24874847 cagttgcttcagctgcttagtagataaaaactctgcaccactctcct 24874801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41606482 - 41606436
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||    
T  41606482 cagttgcttcagctgcttagtagataaaaactccgcaccactttcct 41606436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44383667 - 44383621
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||    
T  44383667 cagttgcttcagctgcttagtagataaaaactctacaccactttcct 44383621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24264716 - 24264762
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||||| |||||| | |||||||||||    
T  24264716 cagttgcttcagctgcttagtagatagaaactccgcaccactttcct 24264762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24657755 - 24657709
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||| |||||||  ||||||||||    
T  24657755 cagttgcttcagctgcttagtagataagaactctgctccactttcct 24657709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24705579 - 24705533
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||| |||||||| ||||||| |||||||||||    
T  24705579 cagttgcttcagctgcttggtagataagaactctgcaccactttcct 24705533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 11351804 - 11351762
Alignment:
Q  5 tgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||| |||||||| ||||||| |||||||||||    
T  11351804 tgcttcagctgcttggtagataagaactctgcaccactttcct 11351762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 193
Target Start/End: Complemental strand, 19716596 - 19716474
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    |||||||||||||||||| | | || || ||||  ||||||| || |||||||||    |||| || ||||||||| || |||||||||||| | |||||    
T  19716596 tacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcgccaca 19716497  T
Q  171 attgaaacacacaatctcagcag 193  Q
     ||| |||| || ||||||||||    
T  19716496 cttgtaacaaacgatctcagcag 19716474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 193
Target Start/End: Complemental strand, 19721159 - 19721037
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    |||||||||||||||||| | | || || ||||  ||||||| || |||||||||    |||| || ||||||||| || |||||||||||| | |||||    
T  19721159 tacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcgccaca 19721060  T
Q  171 attgaaacacacaatctcagcag 193  Q
     ||| |||| || ||||||||||    
T  19721059 cttgtaacaaacgatctcagcag 19721037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 22733867 - 22733825
Alignment:
Q  5 tgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||| ||||||||||  ||||||||||    
T  22733867 tgcttcagctgcttagtagacaaaaactctgcgccactttcct 22733825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24677833 - 24677879
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||| |||||||| |||| || |||||||||||    
T  24677833 cagttgcttcagctgcttggtagataagaactttgcaccactttcct 24677879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 22733290 - 22733211
Alignment:
Q  134 caggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctc---agcagcatccttcttcttaggc 210  Q
    |||||||| |||| || |||||||||||| |||||||| | ||||| ||||| ||   || |||||||||||||||||||    
T  22733290 caggacaagcattactcttgtggcctttctcaccacaagtaaaacagacaatttctggaggagcatccttcttcttaggc 22733211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 23105819 - 23105779
Alignment:
Q  7 cttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||| ||||||||||  ||||||||||    
T  23105819 cttcagctgcttagtagacaaaaactctgcgccactttcct 23105779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 105; Significance: 1e-52; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 21258 - 21398
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || || ||||| || || |||||||||||||||||||||||||    
T  21258 gtacgcttgcattcagctacaatatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttcccaccac 21357  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  21358 aattgaaacacacaatctcagtagcatccttcttcttaggc 21398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 11730 - 11870
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||| || || ||||| || || |||||||||||||||||||||||||    
T  11730 gtacgcttgcattcagctacaatatgacctttcttgcgacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttcccaccac 11829  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  11830 aattgaaacacacaatctcagtagcatccttcttcttaggc 11870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 72 - 210
Target Start/End: Original strand, 55267 - 55405
Alignment:
Q  72 acgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaa 171  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||| ||||||||     
T  55267 acgcttgcaatcagatactatatgacccttcttgccacaccggacacacttcttaatttcttcaggacaaccattgctcttgtggccttttccaccacag 55366  T
Q  172 ttgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||| |||||||| |||| | |||||||||||||||||    
T  55367 ttgaagcacacaatttcagaaacatccttcttcttaggc 55405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 53471 - 53517
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||||||||||| || |||||||||||    
T  53471 cagttgcttcagctgcttagtagataaaaactttgcaccactttcct 53517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 11213 - 11259
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||| |||||||||||||||||||||||||||||| |||||| ||||    
T  11213 cagtcgcttcagctgcttagtagataaaaactctgcaccactctcct 11259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 17681 - 17727
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||| |||||||||||||||||||||||||||||| |||||| ||||    
T  17681 cagtcgcttcagctgcttagtagataaaaactctgcaccactctcct 17727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 1e-52; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 22137832 - 22137972
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || || ||||| || ||||||||||||||||||||||||||||    
T  22137832 gtacgcttgcattcagctacaatatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacattgcttttgtggcctttcccaccac 22137931  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  22137932 aattgaaacacacaatctcaatagcatccttcttcttaggc 22137972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 22351083 - 22351223
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||||||||| | ||||||||||||||| |||||||||||||||||||||||||| || ||||| || || ||||||||||||||||||||||||||||    
T  22351083 gtacgcttgcattaagctacaatatgacctttcttgccacaccggacacacttcttcatttcttcggggcagacattgcttttgtggcctttcccaccac 22351182  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    | ||||||||||||||||||| |||||||||||||||||||    
T  22351183 agttgaaacacacaatctcagtagcatccttcttcttaggc 22351223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 70 - 210
Target Start/End: Complemental strand, 29473295 - 29473155
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||||||||| ||||||||||||||||| ||||||||||| || ||||||||||| || |||||||| || ||||||||||||||||||||||||||||    
T  29473295 gtacgcttgcattcagctacaatatgacctttcttgccacatcgaacacacttcttgatttcttcagggcagacattgcttttgtggcctttcccaccac 29473196  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||| | |||||||||||||||||||    
T  29473195 aattgaaacacacaatctctgtagcatccttcttcttaggc 29473155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 19773124 - 19773264
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||||||||||||| || || ||||| || || |||||||||||||||||| ||||||    
T  19773124 gtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccac 19773223  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  19773224 aattgaaacacacaatctctgcagcatccttcttcttaggc 19773264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 70 - 210
Target Start/End: Complemental strand, 22330109 - 22329969
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||||||||||||| || || ||||| || || |||||||||||||||||| ||||||    
T  22330109 gtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccac 22330010  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  22330009 aattgaaacacacaatctctgcagcatccttcttcttaggc 22329969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 70 - 210
Target Start/End: Complemental strand, 37288718 - 37288578
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||||||||| ||||||||||| ||| | |||||||||||||||||||||||||| || |||||||| || || |||||||||||||||||||||||||    
T  37288718 gtacgcttgcattcagctacaatgtgaactttcttgccacaccggacacacttcttgatttcttcagggcagacgttgcttttgtggcctttcccaccac 37288619  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||| | |||||||||||||||||||    
T  37288618 aattgaaacacacaatctctgtagcatccttcttcttaggc 37288578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 41774006 - 41774146
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||||||||||||| || || ||||| || || |||||||||||||||||| ||||||    
T  41774006 gtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccac 41774105  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  41774106 aattgaaacacacaatctcagcagcattcttcttcttaggc 41774146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 70 - 209
Target Start/End: Complemental strand, 14996961 - 14996822
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||||||||||||| || || ||||| || || |||||||||||||||||| ||||||    
T  14996961 gtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccac 14996862  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttagg 209  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  14996861 aattgaaacacacaatctctgcagcatccttcttcttagg 14996822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 16359665 - 16359806
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| || || ||||| || || ||||| |||||||||||| |||||    
T  16359665 tgtacggttgcaatcagctacaacatgacccttcttaccacaccggacacacttcttgatttcctcagggcagacgttgctcttgtggcctttctcacca 16359764  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  16359765 caattgaaacacacaatctctgcagcatccttcttcttaggc 16359806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 34569657 - 34569798
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| || || ||||| || || ||||| |||||||||||| |||||    
T  34569657 tgtacggttgcaatcagctacaacatgacccttcttaccacaccggacacacttcttgatttcctcagggcagacgttgctcttgtggcctttctcacca 34569756  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  34569757 caattgaaacacacaatctctgcagcatccttcttcttaggc 34569798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 69 - 208
Target Start/End: Original strand, 27521569 - 27521708
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||| | |||||||||||||||||||||||||| || || ||||| || || |||||||||||||||||| |||||    
T  27521569 tgtacgattgcaatcagctacaacatgatctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcacca 27521668  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttag 208  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  27521669 caattgaaacacacaatctctgcagcatccttcttcttag 27521708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 70 - 209
Target Start/End: Complemental strand, 27682622 - 27682483
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||| |||||||||||||||  |||||| |||||||||||||||||||||||||| || || ||||| || || |||||||||||||||||| ||||||    
T  27682622 gtacgattgcaatcagctacagcatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccac 27682523  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttagg 209  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  27682522 aattgaaacacacaatctctgcagcatccttcttcttagg 27682483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 27613520 - 27613660
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||| |||||||||||||| | |||||| |||||||||||||||||||||||||| || |||||||| || |||||||| |||||||| ||| ||||||    
T  27613520 gtacgattgcaatcagctaccacatgacctttcttgccacaccggacacacttcttgatttcttcagggcagacattgctcttgtggcccttctcaccac 27613619  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||| ||||||||| |||||||||||    
T  27613620 aattgaaacacacaatctctgcagcatccctcttcttaggc 27613660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 71 - 208
Target Start/End: Original strand, 18782279 - 18782419
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| || |||||||||||| | |||||    
T  18782279 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacattttttgatctcttcaggacaaacattactcttgtggcctttctcgccaca 18782378  T
Q  171 attgaaacacacaatct---cagcagcatccttcttcttag 208  Q
     |||||||| |||||||   ||| |||||||||||||||||    
T  18782379 gttgaaacaaacaatctccgcaggagcatccttcttcttag 18782419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 40711943 - 40712084
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| ||||||||||| || | | |||||||||| ||||||||||| |||||||| || || ||||||||  | ||||| |||||||||||| |||||    
T  40711943 tgtacgattgcaatcagccaccacacgacccttcttaccacaccggacgcacttcttgatttcctcaggacaggcgttgctcttgtggcctttctcacca 40712042  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  40712043 caattgaagcacacaatctctgcagcatccttcttcttaggc 40712084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 74 - 210
Target Start/End: Original strand, 20803765 - 20803904
Alignment:
Q  74 gcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaatt 173  Q
    ||||||| ||||||| | ||||||||||||||||||||| || ||| ||||| | ||| ||||| |||||||| || |||||||||||| ||||| ||||    
T  20803765 gcttgcagtcagctaaagtatgacccttcttgccacaccagaaacatttcttcacctcctcagggcaaacatttctcttgtggcctttctcaccataatt 20803864  T
Q  174 gaaacacacaatct---cagcagcatccttcttcttaggc 210  Q
    |||||| |||||||   ||| |||||||||||||||||||    
T  20803865 gaaacagacaatctccgcaggagcatccttcttcttaggc 20803904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 74 - 210
Target Start/End: Original strand, 23461139 - 23461278
Alignment:
Q  74 gcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaatt 173  Q
    ||||||| ||||||| | |||||| ||||||||||||||||| ||| ||||| | ||| || |||||||||||||| |||||||||||| ||||||||||    
T  23461139 gcttgcattcagctaaagtatgactcttcttgccacaccggaaacatttcttcacctcctctggacaaacattgctcttgtggcctttctcaccacaatt 23461238  T
Q  174 gaaacacacaat---ctcagcagcatccttcttcttaggc 210  Q
    |||| | |||||   | ||| |||||||||||||||||||    
T  23461239 gaaatagacaatttccgcaggagcatccttcttcttaggc 23461278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 27665706 - 27665610
Alignment:
Q  76 ttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaat 172  Q
    |||||||||||||||| |||||| ||||| |||||||||||||||||||| || || ||||| ||  | ||||| |||||||||||| |||||||||    
T  27665706 ttgcaatcagctacaacatgacctttcttaccacaccggacacacttcttgatttcctcagggcaggcgttgctcttgtggcctttctcaccacaat 27665610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 16359149 - 16359195
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  16359149 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 16359195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22330626 - 22330580
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  22330626 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 22330580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 27613003 - 27613049
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  27613003 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 27613049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 27666229 - 27666183
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  27666229 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 27666183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29473812 - 29473766
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  29473812 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 29473766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34569141 - 34569187
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  34569141 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 34569187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 40711427 - 40711473
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  40711427 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 40711473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 41773489 - 41773535
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  41773489 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 41773535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 14997478 - 14997432
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||    
T  14997478 cagttgcttcagctgcttagtagataaaaactccgcaccactttcct 14997432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 19772607 - 19772653
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||    
T  19772607 cagttgcttcaactgcttagtagataaaaactctgcaccactttcct 19772653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22137315 - 22137361
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||    
T  22137315 cagttgcttcagctgcttggtagataaaaactctgcaccactttcct 22137361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22350566 - 22350612
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  22350566 cagttgcttcagctgcttagtagataaaaactctgcaccactctcct 22350612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 23526280 - 23526338
Alignment:
Q  135 aggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagcag 193  Q
    ||||||| ||||||| |||||||||||| |||||||||| ||||| |||||||||||||    
T  23526280 aggacaagcattgctcttgtggcctttctcaccacaattaaaacagacaatctcagcag 23526338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 27521053 - 27521099
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||    
T  27521053 cagttgcttcagctgcttagtagataaaaactctgcgccactttcct 27521099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 37289235 - 37289189
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||    
T  37289235 cagttgcttcagctgcttagtagataaaaactctacaccactttcct 37289189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 18781764 - 18781807
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||| ||||||| |||||||||||    
T  18781764 ttgcttcagctgcttagtagataagaactctgcaccactttcct 18781807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 21343150 - 21343107
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||| ||||||| |||||||||||    
T  21343150 ttgcttcagctgcttagtagataagaactctgcaccactttcct 21343107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 23078059 - 23078004
Alignment:
Q  138 acaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagcag 193  Q
    |||| |||||||||||||||||||  ||||||| |||||||| |||||||||||||    
T  23078059 acaagcattgcttttgtggcctttttcaccacacttgaaacatacaatctcagcag 23078004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20803244 - 20803290
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||| |||||||| ||||||| |||||||||||    
T  20803244 cagttgcttcagctgcttggtagataagaactctgcaccactttcct 20803290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 27683139 - 27683093
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||| ||||||||||||||||||||||||||| | |||||||||||    
T  27683139 cagttccttcagctgcttagtagataaaaactccgcaccactttcct 27683093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 21883005 - 21883062
Alignment:
Q  136 ggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagcag 193  Q
    |||||| ||||||| |||||||||||| | |||||||| ||||| |||||||||||||    
T  21883005 ggacaagcattgctcttgtggcctttctcgccacaattaaaacagacaatctcagcag 21883062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 25429648 - 25429727
Alignment:
Q  134 caggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatct---cagcagcatccttcttcttaggc 210  Q
    |||||||| ||||||| |||||||||||| |||||||| | ||||| |||||||   ||| || ||||||||||||||||    
T  25429648 caggacaagcattgctcttgtggcctttctcaccacaagtaaaacagacaatctctgcaggagtatccttcttcttaggc 25429727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 22505893 - 22505945
Alignment:
Q  138 acaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcag 190  Q
    |||||||||||| |||||||||||| ||||||| ||| |||| ||||||||||    
T  22505893 acaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcag 22505945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 21882421 - 21882467
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||| ||||| || ||||||| |||||||||||    
T  21882421 cagttgcttcagctgcttggtagacaagaactctgcaccactttcct 21882467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 1e-52; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 22400567 - 22400707
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||| ||||| ||||||||||| ||||    
T  22400567 gtacgcttgcaatccgctacaatatgacccttcttgccacaccggacacacttcttgatctcttcagggcagacattacttttatggcctttccctccac 22400666  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  22400667 aattgaaacacacaatctcagtagcatccatcttcttaggc 22400707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 21842459 - 21842599
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||||||||| || |||||||||||||| ||||||||||| |||||||||||||| || || ||||| || ||||||||||||||||||||||||||||    
T  21842459 gtacgcttgcattcggctacaatatgacctttcttgccacatcggacacacttcttgatttcctcagggcagacattgcttttgtggcctttcccaccac 21842558  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  21842559 aattgaaacacacaatctcagtagcatccttcttcttaggc 21842599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 71 - 210
Target Start/End: Original strand, 19109616 - 19109757
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| |||||| ||| |||    
T  19109616 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttgatctcttcaggacagacattgctttagtgacctttcacacaaca 19109715  T
Q  171 attg--aaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||  |||||||||||||| | |||||||||||||||||||    
T  19109716 attgaaaaacacacaatctcggtagcatccttcttcttaggc 19109757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 69 - 210
Target Start/End: Complemental strand, 33388142 - 33388001
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||| |||||||||||||||||||||||||| || || || || ||||| |||||||||||||||||| |||||    
T  33388142 tgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctccgggcaaacgttgcttttgtggcctttctcacca 33388043  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  33388042 caattgaaacacacaatctctgcagcatccttcttcttaggc 33388001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 21833549 - 21833689
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||||||||||||| || || ||||| || || |||||||||||||||||| ||||||    
T  21833549 gtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccac 21833648  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  21833649 aattgaaacacacaatctctgcagcatccttcttcttaggc 21833689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 69 - 210
Target Start/End: Complemental strand, 51330605 - 51330464
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||| |||||||||||||||||||||||||| || || ||||| || || ||||||||||||||| || | |||    
T  51330605 tgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctctctctcca 51330506  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  51330505 caattgaaacacacaatctctgcagcatccttcttcttaggc 51330464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 75 - 210
Target Start/End: Complemental strand, 17042122 - 17041985
Alignment:
Q  75 cttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattg 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||| || |||||||||||||| ||||| |||    
T  17042122 cttgcaatcagctacaatatgacccttcttgccacaccggacacatttcttgatctcttcaggataaacattactcttgtggcctttcccgccacagttg 17042023  T
Q  175 aaacacacaatctc---agcagcatccttcttcttaggc 210  Q
    ||||| | ||||||   || |||||||||||||||||||    
T  17042022 aaaca-aaaatctccgaaggagcatccttcttcttaggc 17041985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 79 - 210
Target Start/End: Complemental strand, 16347698 - 16347567
Alignment:
Q  79 caatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattgaaac 178  Q
    ||||||||||| | |||||||||||| |||||||||||||||||||| || || |||| |||  | ||||| |||||||||||| ||||||||||||| |    
T  16347698 caatcagctacgacatgacccttcttaccacaccggacacacttcttgatttcctcagaacaggcgttgctcttgtggcctttctcaccacaattgaagc 16347599  T
Q  179 acacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||||||||||||||||    
T  16347598 acacaatctcagcagcatccttcttcttaggc 16347567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 76 - 210
Target Start/End: Complemental strand, 41350774 - 41350640
Alignment:
Q  76 ttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattga 175  Q
    |||||||||||||| | |||||||||||| |||||||||||||||||||| || || |||| |||  | ||||| |||||||||||| ||||||||||||    
T  41350774 ttgcaatcagctacgacatgacccttcttaccacaccggacacacttcttgatttcctcagaacaggcgttgctcttgtggcctttctcaccacaattga 41350675  T
Q  176 aacacacaatctcagcagcatccttcttcttaggc 210  Q
    | ||||||||||| |||||||||||||||||||||    
T  41350674 agcacacaatctctgcagcatccttcttcttaggc 41350640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 71 - 210
Target Start/End: Complemental strand, 24784968 - 24784826
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    |||||||||| ||||||||  ||||||||||||||||||||||| |||| ||||| ||||| || |||||||||||||| |||||||||||| ||||| |    
T  24784968 tacgcttgcagtcagctaccgtatgacccttcttgccacaccgggcacatttctttatctcctctggacaaacattgctcttgtggcctttctcaccata 24784869  T
Q  171 attgaaacacacaatct---cagcagcatccttcttcttaggc 210  Q
    ||||||||| |||||||   ||| |||||||||||||||||||    
T  24784868 attgaaacagacaatctccgcaggagcatccttcttcttaggc 24784826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 73 - 210
Target Start/End: Complemental strand, 21228665 - 21228525
Alignment:
Q  73 cgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaat 172  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||| ||||| |||||| || |||||||||| || |||||||||||| | ||||| |    
T  21228665 cgcttgcaatcagctacaatttgacccttcttgccacacctgacacatttcttgatctctacaagacaaacattactcttgtggcctttctcgccacagt 21228566  T
Q  173 tgaaacacacaatct---cagcagcatccttcttcttaggc 210  Q
    ||||||| |||||||   ||| |||||||||||||||||||    
T  21228565 tgaaacaaacaatctccgcaggagcatccttcttcttaggc 21228525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 74 - 187
Target Start/End: Complemental strand, 22435841 - 22435728
Alignment:
Q  74 gcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaatt 173  Q
    |||||||||||||||   ||||||||||||||||||| |||| ||| ||||| | ||| || |||||||||||||| |||||||||||| ||||||||||    
T  22435841 gcttgcaatcagctaatgtatgacccttcttgccacatcggaaacatttctttacctcctctggacaaacattgctcttgtggcctttctcaccacaatt 22435742  T
Q  174 gaaacacacaatct 187  Q
    |||| | |||||||    
T  22435741 gaaatagacaatct 22435728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16348224 - 16348178
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  16348224 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 16348178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 21833032 - 21833078
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  21833032 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 21833078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 21839680 - 21839726
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  21839680 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 21839726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33388658 - 33388612
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  33388658 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 33388612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41351297 - 41351251
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  41351297 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 41351251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 51331121 - 51331075
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  51331121 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 51331075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 210
Target Start/End: Original strand, 21176671 - 21176757
Alignment:
Q  127 atctcttcaggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatct---cagcagcatccttcttcttaggc 210  Q
    |||||||| |||||||||||||| |||||| ||||| |||||||||| | ||| |||||||   ||| |||||||||||||||||||    
T  21176671 atctcttctggacaaacattgctcttgtggactttctcaccacaattaatacagacaatctccacaggagcatccttcttcttaggc 21176757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 19109101 - 19109144
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  19109101 ttgcttcagctgcttagtagataaaaactctgcaccactttcct 19109144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 92 - 210
Target Start/End: Complemental strand, 20081466 - 20081345
Alignment:
Q  92 tatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagc 191  Q
    ||||||||||||| ||||| || | |||  |||| | |||| | |||||| ||||||| |||||||||||| |||||||||| || || |||||||||||    
T  20081466 tatgacccttctttccacagcgaaaacatctctttacctctcccggacaagcattgctcttgtggcctttctcaccacaattaaagcagacaatctcagc 20081367  T
Q  192 ---agcatccttcttcttaggc 210  Q
       | |||||||||||||||||    
T  20081366 atgaacatccttcttcttaggc 20081345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24785486 - 24785440
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  24785486 cagttgcttcagctgcttagtagataagaactctgcaccactttcct 24785440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 20074753 - 20074701
Alignment:
Q  138 acaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcag 190  Q
    |||||||||||| |||||||||||| ||||||| ||| |||||||||||||||    
T  20074753 acaaacattgctcttgtggcctttctcaccacacttgtaacacacaatctcag 20074701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 17042641 - 17042598
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||| |||||| ||||||| |||||||||||    
T  17042641 ttgcttcagctgcttagcagataagaactctgcaccactttcct 17042598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 22359867 - 22359830
Alignment:
Q  7 cttcagctgcttagtagataaaaactctggaccacttt 44  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  22359867 cttcagctgcttagtagacaaaaactctgcaccacttt 22359830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 22502917 - 22502872
Alignment:
Q  2 agttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||| ||||| || ||||||| |||||||||||    
T  22502917 agttgcttcagctgcttggtagacaagaactctgcaccactttcct 22502872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 21961373 - 21961425
Alignment:
Q  138 acaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcag 190  Q
    |||||||||||| |||||||||||  ||||||| ||| |||| ||||||||||    
T  21961373 acaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcag 21961425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 31537041 - 31536989
Alignment:
Q  138 acaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcag 190  Q
    |||||||||||| |||||||||||| ||||||| ||  |||| ||||||||||    
T  31537041 acaaacattgctcttgtggcctttctcaccacacttataacaaacaatctcag 31536989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 52989087 - 52989139
Alignment:
Q  138 acaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcag 190  Q
    |||||||||||| |||||||||||  ||||||| ||| |||| ||||||||||    
T  52989087 acaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcag 52989139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 72 - 190
Target Start/End: Original strand, 424571 - 424689
Alignment:
Q  72 acgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaa 171  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||     
T  424571 acgcttgcaatcagctacaatatgacccttcttgccacatcggacacatttcttaatctcttcaggacaaacattgcttttgtggcctttcacaccacag 424670  T
Q  172 ttgaaacacacaatctcag 190  Q
    ||||| |||||||||||||    
T  424671 ttgaagcacacaatctcag 424689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 72 - 210
Target Start/End: Original strand, 48928 - 49066
Alignment:
Q  72 acgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaa 171  Q
    |||||||||||||||||| ||||||||||||||||||||  |||||||||||||||| |||||||||||| ||||||| |||||||||||||||||| |     
T  48928 acgcttgcaatcagctactatatgacccttcttgccacattggacacacttcttaatttcttcaggacaaccattgctcttgtggcctttcccaccatag 49027  T
Q  172 ttgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||| ||| |||| |||||||||||||||||||    
T  49028 ttgaaacacaaaatttcagaagcatccttcttcttaggc 49066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 93; Significance: 2e-45; HSPs: 3)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 71 - 210
Target Start/End: Complemental strand, 11398 - 11256
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| |||||||||||| |||||||    
T  11398 tacgcttgcaatcagctactatatgacccttcttgccacaccggacacatttctttatctcttctggacaaacattgctcttgtggcctttctcaccaca 11299  T
Q  171 attgaaacacacaatctc---agcagcatccttcttcttaggc 210  Q
    ||| ||||| ||||||||   || |||||||||||||||||||    
T  11298 attaaaacagacaatctccgtaggagcatccttcttcttaggc 11256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 71 - 210
Target Start/End: Complemental strand, 15083 - 14941
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| |||||||||||| |||||||    
T  15083 tacgcttgcaatcagctactatatgacccttcttgccacaccggacacatttctttatctcttctggacaaacattgctcttgtggcctttctcaccaca 14984  T
Q  171 attgaaacacacaatctc---agcagcatccttcttcttaggc 210  Q
    ||| ||||| ||||||||   || |||||||||||||||||||    
T  14983 attaaaacagacaatctccgtaggagcatccttcttcttaggc 14941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11916 - 11870
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||| ||||||||||||||||||||| ||||||  |||||||||||    
T  11916 cagttacttcagctgcttagtagataagaactctacaccactttcct 11870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 93; Significance: 2e-45; HSPs: 4)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 3685 - 3825
Alignment:
Q  70 gtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    ||||||||||| |||||||||||| |||| ||||| |||||||| ||||||||||| || |||||||| || || |||||||||||||||||||||||||    
T  3685 gtacgcttgcattcagctacaataggacctttcttaccacaccgaacacacttcttgatttcttcagggcagacgttgcttttgtggcctttcccaccac 3784  T
Q  170 aattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    ||||||||||||||||||| | |||||||||||||||||||    
T  3785 aattgaaacacacaatctctgtagcatccttcttcttaggc 3825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 80 - 210
Target Start/End: Original strand, 17431 - 17564
Alignment:
Q  80 aatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattgaaaca 179  Q
    |||||||||| ||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||||| || |||||||||||| ||||||||||||||||    
T  17431 aatcagctactatatgacccttattgccacaccggacacatttctttatctcttctggacaaacattactcttgtggcctttctcaccacaattgaaaca 17530  T
Q  180 cacaatct---cagcagcatccttcttcttaggc 210  Q
     |||||||   ||| |||||||||||||||||||    
T  17531 gacaatctccgcaggagcatccttcttcttaggc 17564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 16907 - 16950
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||| ||||||| |||||||||||    
T  16907 ttgcttcagctgcttagtagataagaactctgcaccactttcct 16950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3168 - 3214
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||  | |||||||||||    
T  3168 cagttgcttcagctgcttagtagataaaaacttcgcaccactttcct 3214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1881 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 73 - 210
Target Start/End: Complemental strand, 520 - 380
Alignment:
Q  73 cgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaat 172  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| |||||||||||| | |||||||    
T  520 cgcttgcaatcatctacaatatgacccttcttgccacaccggacacatttcttgatctcctcaggacaaacattgctcttgtggcctttctcgccacaat 421  T
Q  173 tgaaacacacaatctc---agcagcatccttcttcttaggc 210  Q
    ||||||| ||||||||   || |||||||||||||||||||    
T  420 tgaaacaaacaatctccgtaggagcatccttcttcttaggc 380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 22507 - 22648
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| || || || || || || ||||| |||||||||||| |||||    
T  22507 tgtacggttgcaatcagctacaacatgacccttcttaccacaccggacacacttcttgatttcctcggggcagacgttgctcttgtggcctttctcacca 22606  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| |||| ||||||||||||||||    
T  22607 caattgaaacacacaatctctgcagtatccttcttcttaggc 22648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 21991 - 22037
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  21991 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 22037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 7496 - 7637
Alignment:
Q  69 tgtacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccacca 168  Q
    |||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| || || || || || || ||||| |||||||||||| |||||    
T  7496 tgtacggttgcaatcagctacaacatgacccttcttaccacaccggacacacttcttgatttcctcggggcagacgttgctcttgtggcctttctcacca 7595  T
Q  169 caattgaaacacacaatctcagcagcatccttcttcttaggc 210  Q
    |||||||||||||||||||| |||| ||||||||||||||||    
T  7596 caattgaaacacacaatctctgcagtatccttcttcttaggc 7637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 74 - 210
Target Start/End: Complemental strand, 229891 - 229752
Alignment:
Q  74 gcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaatt 173  Q
    |||||||||||||||  ||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| |||||||||||| ||||||||||    
T  229891 gcttgcaatcagctattatatgacccttcttgccacaccggacacatttctttatctcttctggacaaacattgctcttgtggcctttctcaccacaatt 229792  T
Q  174 gaaacacacaatct---cagcagcatccttcttcttaggc 210  Q
    |||||| |||||||   ||| |||||||||||| ||||||    
T  229791 gaaacaaacaatctccgcaggagcatccttcttattaggc 229752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 251948 - 251999
Alignment:
Q  138 acaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctca 189  Q
    |||| ||| |||||||||||||||  ||||||| ||||||||||||||||||    
T  251948 acaagcatagcttttgtggcctttttcaccacacttgaaacacacaatctca 251999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 71 - 210
Target Start/End: Complemental strand, 14074 - 13932
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    ||||||||||||||||||| ||| |||||||||||||||||| |||||| ||||| |||||||| |||||||||||||| |||||||||||| |||||||    
T  14074 tacgcttgcaatcagctactatacgacccttcttgccacacctgacacatttctttatctcttctggacaaacattgctcttgtggcctttctcaccaca 13975  T
Q  171 attgaaacacacaatct---cagcagcatccttcttcttaggc 210  Q
    ||| ||||| |||||||   ||| |||||||||||||||||||    
T  13974 attaaaacagacaatctccgcaggagcatccttcttcttaggc 13932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2059 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold2059
Description:

Target: scaffold2059; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 73 - 210
Target Start/End: Complemental strand, 809 - 669
Alignment:
Q  73 cgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaat 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||| || |||||| ||||| |||||||||    
T  809 cgcttgcaatcagctacaatatgacccttcttgccacaccggacacatttcttgatctctacaggacaaacattactcttgtggtctttctcaccacaat 710  T
Q  173 tgaaacacacaatctcagc---agcatccttcttcttaggc 210  Q
    |||||||   |||||||||   ||||||| |||||||||||    
T  709 tgaaacaagtaatctcagctggagcatccctcttcttaggc 669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 71 - 206
Target Start/End: Original strand, 141 - 279
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||| || |||||||||||||| |||||    
T  141 tacgcttgcaatcagctacaatatgacccttcttaccacaccagacacatttcttgatctcttcaggacaaacattactcttgtggcctttcccgccaca 240  T
Q  171 attgaaacacacaat---ctcagcagcatccttcttctt 206  Q
     |||||||| |||||   | ||| |||||||||||||||    
T  241 gttgaaacaaacaatatccgcaggagcatccttcttctt 279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 71 - 210
Target Start/End: Original strand, 14686 - 14828
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||| |||||||||| || |||||||| ||| | |||||    
T  14686 tacgcttgcaatcagctacaatatgactcttcttgccacaccggacacatttcttgatctcttcaagacaaacattactcttgtggccattctcgccaca 14785  T
Q  171 attgaaacacacaatct---cagcagcatccttcttcttaggc 210  Q
     |||||||| |||||||   ||| |||||||||||||||||||    
T  14786 cttgaaacaaacaatctccgcaggagcatccttcttcttaggc 14828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 73 - 210
Target Start/End: Original strand, 5262 - 5402
Alignment:
Q  73 cgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaat 172  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||| || || ||||| ||| | ||||| |    
T  5262 cgcttgcaatcagctacaatatgacccttcttgccacaccagacacatttcttgatctcttcaggacaaacattactcttatggcccttctcgccacagt 5361  T
Q  173 tgaaacacacaatct---cagcagcatccttcttcttaggc 210  Q
    ||||||| |||||||   ||| |||||||||||||||||||    
T  5362 tgaaacaaacaatctccgcaggagcatccttcttcttaggc 5402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 76 - 185
Target Start/End: Complemental strand, 7816 - 7707
Alignment:
Q  76 ttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattga 175  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| || |||||||||||||| ||||| ||||    
T  7816 ttgcaatcagctataatatgacccttcttgccacaccggacacatttcttgatctcttcaggacaaacattactcttgtggcctttcccgccacagttga 7717  T
Q  176 aacacacaat 185  Q
    |||| |||||    
T  7716 aacaaacaat 7707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 78; Significance: 2e-36; HSPs: 4)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 74 - 206
Target Start/End: Complemental strand, 10278 - 10143
Alignment:
Q  74 gcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaatt 173  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||| || |||||||||||||| ||| | ||    
T  10278 gcttgcaatcagctacaatatgacccttcttaccacaccggacacatttcttgatctcttcaggacaaacattactcttgtggcctttcccgccatagtt 10179  T
Q  174 gaaacacacaat---ctcagcagcatccttcttctt 206  Q
    |||||| |||||   | ||| |||||||||||||||    
T  10178 gaaacaaacaatatccgcaggagcatccttcttctt 10143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 74 - 206
Target Start/End: Complemental strand, 12933 - 12798
Alignment:
Q  74 gcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaatt 173  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||| || |||||||||||||| ||| | ||    
T  12933 gcttgcaatcagctacaatatgacccttcttaccacaccggacacatttcttgatctcttcaggacaaacattactcttgtggcctttcccgccatagtt 12834  T
Q  174 gaaacacacaat---ctcagcagcatccttcttctt 206  Q
    |||||| |||||   | ||| |||||||||||||||    
T  12833 gaaacaaacaatatccgcaggagcatccttcttctt 12798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 210
Target Start/End: Original strand, 32146 - 32283
Alignment:
Q  76 ttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattga 175  Q
    |||||||||||||    ||||| |||||| |||||||||| |||  | || | |||| |||||||| ||||||| |||||||||||| | |||||||| |    
T  32146 ttgcaatcagctaatgcatgactcttcttaccacaccggaaacatctttttacctctccaggacaagcattgctcttgtggcctttctcgccacaattaa 32245  T
Q  176 aacacacaatctcagc---agcatccttcttcttaggc 210  Q
    |||| |||||||||||   |||||||||||||||||||    
T  32246 aacagacaatctcagcaggagcatccttcttcttaggc 32283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 37612 - 37715
Alignment:
Q  76 ttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattga 175  Q
    |||||||||||||    ||||| |||||| |||||||||| |||  | || | |||| |||||||| ||||||| |||||||||||| | |||||||| |    
T  37612 ttgcaatcagctaatgcatgactcttcttaccacaccggaaacatctttttacctctccaggacaagcattgctcttgtggcctttctcgccacaattaa 37711  T
Q  176 aaca 179  Q
    ||||    
T  37712 aaca 37715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 74 - 210
Target Start/End: Original strand, 1 - 140
Alignment:
Q  74 gcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaatt 173  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||| ||||| | ||| |  ||||||||||||||||||||||||||| |||||||| |    
T  1 gcttgcaatcagctaaagtatgacccttcttgccacaccggaaacatttcttcacctcctttggacaaacattgcttttgtggcctttctcaccacaaat 100  T
Q  174 gaaacacacaatctcagc---agcatccttcttcttaggc 210  Q
    |||||| |||||||| ||   |||||||||||||||||||    
T  101 gaaacagacaatctccgcaagagcatccttcttcttaggc 140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 71 - 210
Target Start/End: Original strand, 36760 - 36902
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    ||||||||||||||||||   |||||||||||||||||||||||| ||| ||||| | ||| || |||||||||||||| |||||||||||| |||||||    
T  36760 tacgcttgcaatcagctaacgtatgacccttcttgccacaccggaaacatttcttcacctcctctggacaaacattgctcttgtggcctttctcaccaca 36859  T
Q  171 attgaaacacacaatct---cagcagcatccttcttcttaggc 210  Q
    ||||||||| || ||||   ||| |||||||||||||||||||    
T  36860 attgaaacagacgatctccgcaggagcatccttcttcttaggc 36902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28822 - 28868
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||| || ||||||| |||||||||||    
T  28822 cagttgcttcagctgcttagtagacaagaactctgcaccactttcct 28868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 71 - 179
Target Start/End: Original strand, 171380 - 171488
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| |||||| ||||||||||||| || |||||||||||| |||||||    
T  171380 tacgcttgcaatcagctacaatatgacctttcttgccacaccgaacacatttcttgatctctacaggacaaacattactcttgtggcctttctcaccaca 171479  T
Q  171 attgaaaca 179  Q
    |||| ||||    
T  171480 attgtaaca 171488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 72; Significance: 6e-33; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 73 - 176
Target Start/End: Original strand, 114 - 217
Alignment:
Q  73 cgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaat 172  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||| ||||| |||||| ||||||||||||| || |||||||||||| |||||||||    
T  114 cgcttgcaatcagctacaacatgacccttcttaccacaccggacacatttcttgatctctacaggacaaacattactcttgtggcctttctcaccacaat 213  T
Q  173 tgaa 176  Q
    ||||    
T  214 tgaa 217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 82 - 176
Target Start/End: Complemental strand, 139641 - 139547
Alignment:
Q  82 tcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattgaa 176  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||| || |||||||||||| |||||||||||||    
T  139641 tcagctacaatatgacccttcttgccacaccggacacatttcttgatctctacaggacaaacattactcttgtggcctttctcaccacaattgaa 139547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 66; Significance: 2e-29; HSPs: 2)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 74 - 210
Target Start/End: Complemental strand, 10197 - 10058
Alignment:
Q  74 gcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaatt 173  Q
    |||| ||||||||||   |||||||||||||||||||||||| ||| ||||| | ||| ||  ||||||||||||| |||||||||||| ||||||||||    
T  10197 gcttacaatcagctaatgtatgacccttcttgccacaccggaaacatttctttacctcctctagacaaacattgctcttgtggcctttctcaccacaatt 10098  T
Q  174 gaaacacacaatctc---agcagcatccttcttcttaggc 210  Q
    |||||| ||||||||   || |||||||||||||||||||    
T  10097 gaaacagacaatctccgtaggagcatccttcttcttaggc 10058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 10718 - 10672
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||| ||||||||| || ||||||| |||||||||||    
T  10718 cagttgcttcagcttcttagtagacaagaactctgcaccactttcct 10672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 74 - 210
Target Start/End: Complemental strand, 15618 - 15479
Alignment:
Q  74 gcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaatt 173  Q
    |||||||||||||||   |||||||||||||||||||||||| |||||||||   ||| || ||||||| |||||| |||||||||||| ||||||||||    
T  15618 gcttgcaatcagctaatgtatgacccttcttgccacaccggaaacacttctttgcctcctctggacaaaaattgctcttgtggcctttctcaccacaatt 15519  T
Q  174 gaaacacacaatct---cagcagcatccttcttcttaggc 210  Q
    |||||| |  ||||   ||| |||||||||||||||||||    
T  15518 gaaacagatgatctccgcaggagcatccttcttcttaggc 15479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 71 - 210
Target Start/End: Original strand, 50 - 192
Alignment:
Q  71 tacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccaca 170  Q
    |||||||||||||| |||   ||||||| |||||||||| ||| | ||  ||||| | ||| ||||||||||||||||| |||||||||||| |||||||    
T  50 tacgcttgcaatcaactaatgtatgacctttcttgccacgccgaaaacttttcttcacctcctcaggacaaacattgctcttgtggcctttctcaccaca 149  T
Q  171 attgaaacacacaatct---cagcagcatccttcttcttaggc 210  Q
    ||||||||| |||||||   ||| |||||||||||||||||||    
T  150 attgaaacagacaatctctgcaggagcatccttcttcttaggc 192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 54; Significance: 3e-22; HSPs: 2)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 94 - 210
Target Start/End: Complemental strand, 28947 - 28828
Alignment:
Q  94 tgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagcag 193  Q
    |||||||||||||||||||||| ||| ||||| | ||| | ||||||||||||||| |||||||||||| | ||||||||||||||   ||||| |||||    
T  28947 tgacccttcttgccacaccggaaacatttctttacctccttaggacaaacattgctcttgtggcctttctcgccacaattgaaacaggtaatcttagcag 28848  T
Q  194 ---catccttcttcttaggc 210  Q
       |||||||||||||||||    
T  28847 gaacatccttcttcttaggc 28828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29488 - 29442
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||| ||||||||||||||||||||| ||||||| |||||||||||    
T  29488 cagtttcttcagctgcttagtagataagaactctgcaccactttcct 29442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1459 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold1459
Description:

Target: scaffold1459; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 1116 - 992
Alignment:
Q  89 caatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctc 188  Q
    ||||||||||||||||||||||||||| ||| ||||| | ||| || ||||||||| |||| ||| |||||||| | ||||||||||||||   ||||||    
T  1116 caatatgacccttcttgccacaccggaaacatttctttacctcctctggacaaacaatgctcttgcggcctttctcgccacaattgaaacaggtaatctc 1017  T
Q  189 agcag---catccttcttcttaggc 210  Q
    || ||   |||||||||||||||||    
T  1016 agtaggaacatccttcttcttaggc 992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1459; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1592 - 1546
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||    
T  1592 cagttgcttcagctgcttagtagatagaaactctacaccactttcct 1546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 94 - 209
Target Start/End: Complemental strand, 17085 - 16967
Alignment:
Q  94 tgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagcag 193  Q
    ||||||||||||||||||| || ||| ||||| | ||| || ||||||||| |||| |||||||||||| ||||||||||||||||   |||||||||||    
T  17085 tgacccttcttgccacaccagaaacatttcttcacctcctctggacaaacagtgctcttgtggcctttctcaccacaattgaaacaagtaatctcagcag 16986  T
Q  194 ---catccttcttcttagg 209  Q
       ||||||| ||||||||    
T  16985 gaacatcctttttcttagg 16967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 17623 - 17580
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||    
T  17623 ttgcttcagcttcttagtagataagaactctgcaccactttcct 17580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 210
Target Start/End: Original strand, 3131 - 3268
Alignment:
Q  76 ttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattga 175  Q
    |||||||||||||   | |||||||||||||||||||||| ||||||||  | ||| ||||||||| || | || |||||||||||| ||||||||||||    
T  3131 ttgcaatcagctaatgtgtgacccttcttgccacaccggaaacacttctccacctcctcaggacaagcagtactcttgtggcctttctcaccacaattga 3230  T
Q  176 aacacacaatctcagcag---catccttcttcttaggc 210  Q
    || |   |||||||||||   ||||||| |||||||||    
T  3231 aagaagtaatctcagcaggaacatcctttttcttaggc 3268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 7677 - 7557
Alignment:
Q  93 atgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagca 192  Q
    |||||||||||| ||||| |||| | |  |||| | |||||| ||||||| |||||| |||||||||||| |||||||||| || || ||||||||||||    
T  7677 atgacccttcttaccacatcggaaatatctctttacctcttccggacaaatattgctcttgtggcctttctcaccacaattaaagcagacaatctcagca 7578  T
Q  193 g---catccttcttcttaggc 210  Q
    |   |||||||||||||||||    
T  7577 ggaacatccttcttcttaggc 7557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 46; Significance: 2e-17; HSPs: 4)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 76 - 193
Target Start/End: Original strand, 21871 - 21988
Alignment:
Q  76 ttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattga 175  Q
    |||||||||||||    |||||||||||| ||||| |||| |||  |||| ||||||  ||||||| ||||| | |||||||||||| |||||||||| |    
T  21871 ttgcaatcagctagtgcatgacccttcttaccacatcggaaacatctctttatctctcgaggacaagcattgatcttgtggcctttctcaccacaattaa 21970  T
Q  176 aacacacaatctcagcag 193  Q
    |||| |||||||||||||    
T  21971 aacagacaatctcagcag 21988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 76 - 193
Target Start/End: Original strand, 37295 - 37412
Alignment:
Q  76 ttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattga 175  Q
    |||||||||||||    |||||||||||| ||||| |||| |||  |||| ||||||  ||||||| ||||| | |||||||||||| |||||||||| |    
T  37295 ttgcaatcagctagtgcatgacccttcttaccacatcggaaacatctctttatctctcgaggacaagcattgatcttgtggcctttctcaccacaattaa 37394  T
Q  176 aacacacaatctcagcag 193  Q
    |||| |||||||||||||    
T  37395 aacagacaatctcagcag 37412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 21350 - 21394
Alignment:
Q  3 gttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||| ||||| || ||||||| |||||||||||    
T  21350 gttgcttcagctgcttggtagacaagaactctgcaccactttcct 21394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 36774 - 36818
Alignment:
Q  3 gttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||| ||||| || ||||||| |||||||||||    
T  36774 gttgcttcagctgcttggtagacaagaactctgcaccactttcct 36818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 76 - 193
Target Start/End: Complemental strand, 30611 - 30494
Alignment:
Q  76 ttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattga 175  Q
    |||||||||||||    |||||||||||| ||||| |||| |||  |||| | |||| | |||||| ||||||| |||||||||||| |||||||||| |    
T  30611 ttgcaatcagctagtgcatgacccttcttaccacatcggaaacatctctttacctctcctggacaagcattgctcttgtggcctttctcaccacaattaa 30512  T
Q  176 aacacacaatctcagcag 193  Q
    |||| |||||||||||||    
T  30511 aacagacaatctcagcag 30494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 151829 - 151871
Alignment:
Q  5 tgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||| ||||||||||  ||||||||||    
T  151829 tgcttcagctgcttagtagacaaaaactctgcgccactttcct 151871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 74 - 206
Target Start/End: Original strand, 379 - 511
Alignment:
Q  74 gcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaatt 173  Q
    |||||||||||||||    |||||||||||| |||||| ||| |||  | || | |||||  ||| |||||||||| |||||||||||| ||||||||||    
T  379 gcttgcaatcagctaatgcatgacccttcttaccacactggaaacatctttttacctctttcggaaaaacattgctcttgtggcctttctcaccacaatt 478  T
Q  174 gaaacacacaatctcagcagcatccttcttctt 206  Q
     ||||| ||||||||||||| | | ||||||||    
T  479 aaaacagacaatctcagcaggagcattcttctt 511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 136 - 210
Target Start/End: Complemental strand, 50322 - 50245
Alignment:
Q  136 ggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagcag---catccttcttcttaggc 210  Q
    |||||| |||||||||||||||||||| |||||||||| || || |||||||||||||   |||||||||||||||||    
T  50322 ggacaagcattgcttttgtggcctttctcaccacaattaaagcagacaatctcagcaggaacatccttcttcttaggc 50245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 50904 - 50859
Alignment:
Q  2 agttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||| || ||||||| |||||||||||    
T  50904 agttgcttcagctgcttagtagacaagaactctgcaccactttcct 50859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9684 - 9730
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  9684 cagttgcttcagctgcttagtagataaaaactctgcaccactttcct 9730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 179
Target Start/End: Original strand, 406 - 511
Alignment:
Q  74 gcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaatt 173  Q
    ||||||||||| |||   | |||||||||||||||||||||| ||||| ||| | ||| ||| ||||| || | || |||||||||||| ||||||||||    
T  406 gcttgcaatcaactaatgtgtgacccttcttgccacaccggaaacactccttcacctcctcacgacaagcagtactcttgtggcctttctcaccacaatt 505  T
Q  174 gaaaca 179  Q
    ||||||    
T  506 gaaaca 511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0560 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 8301 - 8255
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||    
T  8301 cagtttcttcagctgcttagtagataaaaactctgcaccactttcct 8255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 252 - 328
Alignment:
Q  137 gacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagcag---catccttcttcttaggc 210  Q
    ||||| ||||||| |||||||||||| |||||||||| || || |||||||||||||   |||||||||||||||||    
T  252 gacaagcattgctcttgtggcctttctcaccacaattaaagcagacaatctcagcaggaacatccttcttcttaggc 328  T

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Target: scaffold0501; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 12408 - 12453
Alignment:
Q  2 agttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||||||||| ||||| || ||||||| |||||||||||    
T  12408 agttgcttcagctgcttggtagacaagaactctgcaccactttcct 12453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 367 - 424
Alignment:
Q  136 ggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagcag 193  Q
    |||||| ||||||| |||||||||||| |||||||||| ||||| |||||||||||||    
T  367 ggacaagcattgctcttgtggcctttctcaccacaattaaaacaaacaatctcagcag 424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 208
Target Start/End: Original strand, 30570 - 30689
Alignment:
Q  92 tatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagc 191  Q
    ||||||||||||| ||||| || | |||  |||| | |||| | |||||| ||||||| |||||| ||||| |||||||||| || || |||||||||||    
T  30570 tatgacccttcttaccacagcgaaaacatctctttacctctcccggacaagcattgctcttgtggtctttctcaccacaattaaagcagacaatctcagc 30669  T
Q  192 ag---catccttcttcttag 208  Q
    ||   |||||||||||||||    
T  30670 aggaacatccttcttcttag 30689  T

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Target: scaffold0042 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 193
Target Start/End: Complemental strand, 36840 - 36740
Alignment:
Q  93 atgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagca 192  Q
    |||||||||||| ||||| |||| |||  |||  ||||||  ||||||| ||||||| || ||||||||| | |||||||| ||||| ||||||||||||    
T  36840 atgacccttcttaccacatcggaaacatctctgtatctctctaggacaagcattgctcttatggcctttctcgccacaattaaaacagacaatctcagca 36741  T
Q  193 g 193  Q
    |    
T  36740 g 36740  T

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Target: scaffold0042; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 37380 - 37334
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||| || ||||||| |||||||||||    
T  37380 cagttgcttcagctgcttagtagacaagaactctgcaccactttcct 37334  T

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Target: scaffold1845 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 1279 - 1224
Alignment:
Q  138 acaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagcag 193  Q
    |||||||||||| |||||||||||| ||||||| ||| |||| |||||||||||||    
T  1279 acaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagcag 1224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15554 - 15508
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||| |||||||| ||||||| |||||||||||    
T  15554 cagttgcttcagctgcttggtagataagaactctgcaccactttcct 15508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 28055 - 28009
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||| |||||||| ||||||| |||||||||||    
T  28055 cagttgcttcagctgcttggtagataagaactctgcaccactttcct 28009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1423 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 356 - 278
Alignment:
Q  135 aggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatct---cagcagcatccttcttcttaggc 210  Q
    ||||||| |||| || |||||||||||| |||||||| | ||||| |||||||   ||| |||||||||||||||||||    
T  356 aggacaagcattactcttgtggcctttctcaccacaagtaaaacagacaatctctgcaggagcatccttcttcttaggc 278  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 514328 - 514276
Alignment:
Q  138 acaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcag 190  Q
    |||||||||||| |||||||||||| ||||||| ||| |||| ||||||||||    
T  514328 acaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcag 514276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1985 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1985
Description:

Target: scaffold1985; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 129 - 86
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||||||  ||||||| |||||||||||    
T  129 ttgcttcagctgcttagtagatatgaactctgcaccactttcct 86  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 24501 - 24462
Alignment:
Q  5 tgcttcagctgcttagtagataaaaactctggaccacttt 44  Q
    |||||||||||||||||||| |||||||||| ||||||||    
T  24501 tgcttcagctgcttagtagacaaaaactctgcaccacttt 24462  T

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Target: scaffold0064 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 69461 - 69366
Alignment:
Q  74 gcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccac 169  Q
    |||||||||||||||    |||||||||||| |||||| ||| |||  | || | |||||| |||||| ||||||| |||||||||||| ||||||    
T  69461 gcttgcaatcagctaatgcatgacccttcttaccacactggaaacatctttttacctcttccggacaagcattgctcttgtggcctttctcaccac 69366  T

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Target: scaffold0621 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 4182 - 4224
Alignment:
Q  5 tgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||| ||||||||||  ||||||||||    
T  4182 tgcttcagctgcttagtagacaaaaactctgtgccactttcct 4224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 3349 - 3391
Alignment:
Q  5 tgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    ||||||||||| |||||||||||||||||||  ||||||||||    
T  3349 tgcttcagctgtttagtagataaaaactctgcgccactttcct 3391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 25268 - 25226
Alignment:
Q  5 tgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||| ||||||||||  ||||||||||    
T  25268 tgcttcagctgcttagtagacaaaaactctgcgccactttcct 25226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 573 - 619
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||| ||||| || ||||||| |||||||||||    
T  573 cagttgcttcagctgcttggtagacaagaactctgcaccactttcct 619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 11591 - 11667
Alignment:
Q  137 gacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagc---agcatccttcttcttaggc 210  Q
    ||||| |||| || |||||||||||| |||||||| | ||||| |||||||| ||   |||||||||||||||||||    
T  11591 gacaagcattactcttgtggcctttctcaccacaagtaaaacagacaatctctgcatgagcatccttcttcttaggc 11667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 17899 - 17857
Alignment:
Q  5 tgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||| ||||||||||  ||||||||||    
T  17899 tgcttcagctgcttagtagacaaaaactctgcgccactttcct 17857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 111463 - 111421
Alignment:
Q  5 tgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||||| ||||||||||  ||||||||||    
T  111463 tgcttcagctgcttagtagacaaaaactctgcgccactttcct 111421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 35274 - 35228
Alignment:
Q  1 cagttgcttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||| ||||| || ||||||| |||||||||||    
T  35274 cagttgcttcagctgcttggtagacaagaactctgcaccactttcct 35228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 193
Target Start/End: Original strand, 7301 - 7422
Alignment:
Q  72 acgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaa 171  Q
    ||||||||||||||||| | | || || ||||  ||||||| ||  ||||||||    |||| || ||||||||| || |||||||||||| | |||||     
T  7301 acgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacac 7400  T
Q  172 ttgaaacacacaatctcagcag 193  Q
    ||| |||| |||||||||||||    
T  7401 ttgtaacaaacaatctcagcag 7422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0611 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 9422 - 9343
Alignment:
Q  134 caggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatct---cagcagcatccttcttcttaggc 210  Q
    |||||||| |||| || |||||||||||| |||||||| | ||||| |||||||   ||| |||||||||||||| ||||    
T  9422 caggacaagcattactcttgtggcctttctcaccacaagtaaaacagacaatctctgcaggagcatccttcttctaaggc 9343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 30263 - 30312
Alignment:
Q  138 acaaacattgcttttgtggcctttcccaccacaattgaaacacacaatct 187  Q
    |||||| |||||||||||||||||| ||||||| ||| |||| |||||||    
T  30263 acaaacgttgcttttgtggcctttctcaccacacttgtaacaaacaatct 30312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 5860 - 5901
Alignment:
Q  4 ttgcttcagctgcttagtagataaaaactctggaccactttc 45  Q
    |||||||||||||||||||||||| |||||||  ||||||||    
T  5860 ttgcttcagctgcttagtagataagaactctgctccactttc 5901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 8540 - 8597
Alignment:
Q  135 aggacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagca 192  Q
    ||||||| ||||||| |||||||||||| | |||||||| ||||| | ||||||||||    
T  8540 aggacaagcattgctcttgtggcctttctcgccacaattaaaacagataatctcagca 8597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 193
Target Start/End: Complemental strand, 98624 - 98503
Alignment:
Q  72 acgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaa 171  Q
    ||||||||||||||||| | | || || ||||  ||||||| || |||||||||    |||| || ||||||||| || |||||||||||| | |||||     
T  98624 acgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacac 98525  T
Q  172 ttgaaacacacaatctcagcag 193  Q
    ||| |||| || ||||||||||    
T  98524 ttgtaacaaacgatctcagcag 98503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2165 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold2165
Description:

Target: scaffold2165; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 778 - 726
Alignment:
Q  138 acaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcag 190  Q
    |||||||||||| |||||||||||| ||||| | ||| |||| ||||||||||    
T  778 acaaacattgctcttgtggcctttctcaccaaacttgtaacaaacaatctcag 726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 18400 - 18440
Alignment:
Q  7 cttcagctgcttagtagataaaaactctggaccactttcct 47  Q
    |||||||||||||||||| ||||||||||  ||||||||||    
T  18400 cttcagctgcttagtagacaaaaactctgcgccactttcct 18440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 790 - 842
Alignment:
Q  138 acaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcag 190  Q
    |||||||||||| |||||||||||  ||||||| ||| |||| ||||||||||    
T  790 acaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcag 842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 192
Target Start/End: Original strand, 54310 - 54430
Alignment:
Q  72 acgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccacaa 171  Q
    ||||||||||| ||||| | | || |||||||  ||||||| || |||||||||    |||| || ||||||||| || |||||||||||| | |||||     
T  54310 acgcttgcaataagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacac 54409  T
Q  172 ttgaaacacacaatctcagca 192  Q
    ||| |||| || |||||||||    
T  54410 ttgtaacaaacgatctcagca 54430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 122138 - 122076
Alignment:
Q  151 ttgtggcctttcccaccacaattgaaacacacaatctcagc---agcatccttcttcttaggc 210  Q
    |||||||||||  ||||||||||||||||   |||||||||   |||||||||||||||||||    
T  122138 ttgtggcctttttcaccacaattgaaacaagtaatctcagctggagcatccttcttcttaggc 122076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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