View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8030_low_4 (Length: 470)

Name: NF8030_low_4
Description: NF8030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8030_low_4
NF8030_low_4
[»] chr7 (71 HSPs)
chr7 (26-450)||(7058388-7058812)
chr7 (26-222)||(7029204-7029403)
chr7 (26-222)||(7013846-7014045)
chr7 (296-424)||(9778488-9778612)
chr7 (296-405)||(2334255-2334367)
chr7 (296-414)||(5409783-5409897)
chr7 (298-404)||(24339650-24339758)
chr7 (348-431)||(26033456-26033539)
chr7 (352-444)||(19991968-19992061)
chr7 (353-449)||(19213766-19213862)
chr7 (55-113)||(7063227-7063285)
chr7 (352-409)||(9408333-9408390)
chr7 (348-424)||(11890914-11890990)
chr7 (296-404)||(13770699-13770803)
chr7 (296-404)||(43027416-43027520)
chr7 (298-404)||(20549799-20549896)
chr7 (352-409)||(3991327-3991384)
chr7 (348-405)||(7438713-7438770)
chr7 (348-404)||(18039006-18039063)
chr7 (297-409)||(32093967-32094077)
chr7 (349-404)||(18215182-18215237)
chr7 (353-404)||(25481910-25481961)
chr7 (349-404)||(27945049-27945104)
chr7 (297-404)||(32308128-32308237)
chr7 (348-402)||(11272581-11272637)
chr7 (350-398)||(1885587-1885635)
chr7 (348-424)||(13300398-13300474)
chr7 (296-409)||(25822658-25822773)
chr7 (353-404)||(21880160-21880211)
chr7 (354-404)||(11061077-11061127)
chr7 (348-414)||(11665435-11665501)
chr7 (352-394)||(21560521-21560563)
chr7 (353-409)||(8234149-8234205)
chr7 (347-399)||(22602704-22602756)
chr7 (353-404)||(28155578-28155629)
chr7 (181-230)||(7063173-7063222)
chr7 (326-404)||(15902830-15902910)
chr7 (352-409)||(35861967-35862024)
chr7 (349-405)||(6028632-6028688)
chr7 (348-404)||(7328686-7328742)
chr7 (370-445)||(11700765-11700845)
chr7 (348-404)||(16341504-16341560)
chr7 (354-398)||(48438560-48438604)
chr7 (353-404)||(7197297-7197348)
chr7 (353-404)||(15680817-15680868)
chr7 (349-404)||(18013070-18013125)
chr7 (353-404)||(24105686-24105737)
chr7 (353-392)||(25956465-25956504)
chr7 (353-404)||(26733312-26733363)
chr7 (354-401)||(33994223-33994270)
chr7 (350-409)||(35297669-35297728)
chr7 (354-404)||(36013799-36013850)
chr7 (354-404)||(1401033-1401083)
chr7 (370-404)||(2424622-2424656)
chr7 (348-402)||(5548686-5548740)
chr7 (297-404)||(6630854-6630963)
chr7 (363-409)||(11831435-11831481)
chr7 (350-404)||(23128658-23128712)
chr7 (370-404)||(29787386-29787420)
chr7 (357-403)||(40287361-40287406)
chr7 (348-405)||(1433461-1433518)
chr7 (353-398)||(5937421-5937466)
chr7 (353-402)||(9482944-9482993)
chr7 (296-404)||(10042945-10043051)
chr7 (349-394)||(17257985-17258030)
chr7 (348-401)||(17307904-17307957)
chr7 (348-405)||(26329377-26329434)
chr7 (370-403)||(30731046-30731079)
chr7 (362-394)||(13557750-13557782)
chr7 (369-404)||(22306539-22306575)
chr7 (348-404)||(31808504-31808560)
[»] scaffold0136 (1 HSPs)
scaffold0136 (296-405)||(3790-3901)
[»] chr5 (70 HSPs)
chr5 (296-442)||(39698509-39698659)
chr5 (296-404)||(31084331-31084435)
chr5 (300-442)||(7677677-7677819)
chr5 (296-404)||(21191008-21191107)
chr5 (353-404)||(6247630-6247681)
chr5 (349-404)||(13287395-13287450)
chr5 (354-442)||(42893328-42893418)
chr5 (295-409)||(30183552-30183668)
chr5 (348-445)||(21351900-21351993)
chr5 (296-409)||(21542033-21542148)
chr5 (296-404)||(21576697-21576796)
chr5 (296-405)||(23015936-23016041)
chr5 (296-404)||(21522758-21522868)
chr5 (296-404)||(21533324-21533434)
chr5 (346-417)||(40131616-40131687)
chr5 (297-404)||(19579709-19579818)
chr5 (296-404)||(15382485-15382592)
chr5 (353-409)||(33178028-33178084)
chr5 (296-404)||(3966511-3966621)
chr5 (353-404)||(8420035-8420086)
chr5 (360-427)||(15405062-15405129)
chr5 (357-404)||(24906305-24906352)
chr5 (348-403)||(37328839-37328894)
chr5 (350-424)||(6471886-6471960)
chr5 (358-404)||(14674277-14674323)
chr5 (352-409)||(10298572-10298629)
chr5 (353-394)||(15884006-15884047)
chr5 (352-404)||(41633743-41633795)
chr5 (356-404)||(43001808-43001856)
chr5 (353-404)||(2548395-2548446)
chr5 (348-427)||(5894828-5894906)
chr5 (357-404)||(7218271-7218318)
chr5 (354-412)||(19028999-19029060)
chr5 (353-404)||(28588674-28588725)
chr5 (359-409)||(31264441-31264491)
chr5 (296-402)||(14873527-14873629)
chr5 (355-404)||(17177025-17177074)
chr5 (349-409)||(30135316-30135377)
chr5 (287-332)||(32630678-32630723)
chr5 (353-402)||(43564891-43564940)
chr5 (368-404)||(4344750-4344786)
chr5 (350-394)||(12199948-12199992)
chr5 (349-405)||(16374338-16374394)
chr5 (370-418)||(24273047-24273095)
chr5 (370-418)||(24389119-24389167)
chr5 (373-405)||(40000555-40000587)
chr5 (355-398)||(10010568-10010611)
chr5 (353-404)||(30502388-30502439)
chr5 (353-404)||(30542731-30542782)
chr5 (370-417)||(33035818-33035865)
chr5 (349-404)||(41091253-41091308)
chr5 (361-404)||(4105265-4105310)
chr5 (370-404)||(5467995-5468029)
chr5 (348-417)||(17088279-17088349)
chr5 (348-405)||(19552540-19552595)
chr5 (348-398)||(21319940-21319990)
chr5 (350-404)||(36838551-36838605)
chr5 (360-401)||(6326304-6326345)
chr5 (372-417)||(6770538-6770583)
chr5 (368-401)||(21194220-21194253)
chr5 (355-404)||(23220991-23221040)
chr5 (414-443)||(32426939-32426968)
chr5 (349-406)||(32444772-32444829)
chr5 (296-344)||(17123107-17123154)
chr5 (354-394)||(19167577-19167617)
chr5 (370-402)||(19438353-19438385)
chr5 (348-404)||(22423807-22423863)
chr5 (350-398)||(30080498-30080546)
chr5 (348-404)||(38749558-38749614)
chr5 (296-332)||(39268550-39268586)
[»] chr1 (91 HSPs)
chr1 (296-404)||(47989505-47989615)
chr1 (297-404)||(5944289-5944400)
chr1 (295-404)||(1486655-1486760)
chr1 (296-412)||(6612112-6612230)
chr1 (354-422)||(40258934-40259002)
chr1 (349-424)||(24577182-24577259)
chr1 (349-442)||(1704988-1705083)
chr1 (354-445)||(1815222-1815315)
chr1 (348-404)||(113307-113363)
chr1 (296-404)||(22515839-22515938)
chr1 (296-403)||(18337338-18337436)
chr1 (296-404)||(31694651-31694763)
chr1 (353-409)||(22881616-22881672)
chr1 (324-404)||(9629869-9629951)
chr1 (353-404)||(38078661-38078712)
chr1 (353-404)||(42359449-42359500)
chr1 (354-424)||(18190109-18190179)
chr1 (296-409)||(37598835-37598938)
chr1 (354-414)||(28273089-28273149)
chr1 (296-409)||(32461405-32461519)
chr1 (296-404)||(40917759-40917867)
chr1 (353-404)||(51410032-51410084)
chr1 (350-409)||(6332674-6332732)
chr1 (296-404)||(9828052-9828162)
chr1 (349-404)||(20157346-20157401)
chr1 (353-404)||(31672895-31672946)
chr1 (353-404)||(46348383-46348434)
chr1 (346-404)||(5376493-5376551)
chr1 (348-404)||(17778557-17778610)
chr1 (358-404)||(31015051-31015097)
chr1 (348-402)||(44482240-44482294)
chr1 (355-404)||(21378586-21378635)
chr1 (304-394)||(30173711-30173803)
chr1 (353-405)||(9103647-9103698)
chr1 (296-404)||(38503328-38503436)
chr1 (349-404)||(7918207-7918262)
chr1 (353-404)||(19058856-19058907)
chr1 (350-405)||(25272489-25272544)
chr1 (353-404)||(41877470-41877521)
chr1 (370-404)||(398782-398816)
chr1 (355-405)||(1864882-1864932)
chr1 (370-412)||(15323163-15323205)
chr1 (348-402)||(25361896-25361950)
chr1 (355-409)||(32434718-32434772)
chr1 (348-394)||(35919271-35919317)
chr1 (354-404)||(36878469-36878519)
chr1 (358-404)||(48450592-48450638)
chr1 (296-394)||(6427482-6427582)
chr1 (353-441)||(40181848-40181930)
chr1 (370-406)||(9449025-9449061)
chr1 (350-398)||(24462267-24462315)
chr1 (346-394)||(28663626-28663674)
chr1 (348-404)||(40285649-40285705)
chr1 (352-411)||(2283667-2283726)
chr1 (353-404)||(5927340-5927391)
chr1 (349-404)||(6427358-6427413)
chr1 (350-401)||(12611977-12612028)
chr1 (296-404)||(18556397-18556507)
chr1 (350-397)||(34371728-34371775)
chr1 (353-404)||(38075970-38076021)
chr1 (349-387)||(2218264-2218302)
chr1 (370-404)||(5898283-5898317)
chr1 (350-404)||(10572586-10572640)
chr1 (370-404)||(12443477-12443511)
chr1 (355-405)||(13997890-13997940)
chr1 (370-404)||(16927202-16927236)
chr1 (357-404)||(18471306-18471355)
chr1 (374-404)||(23738686-23738716)
chr1 (414-444)||(24334782-24334812)
chr1 (354-404)||(27471567-27471617)
chr1 (370-404)||(34298444-34298478)
chr1 (350-404)||(42386394-42386447)
chr1 (352-393)||(15449231-15449272)
chr1 (371-404)||(17754319-17754352)
chr1 (359-404)||(17831537-17831582)
chr1 (353-394)||(21620973-21621014)
chr1 (371-404)||(23653007-23653040)
chr1 (355-404)||(30847722-30847771)
chr1 (372-404)||(2896140-2896172)
chr1 (348-404)||(8010282-8010338)
chr1 (361-404)||(13011223-13011267)
chr1 (360-404)||(14359529-14359572)
chr1 (368-404)||(16812551-16812587)
chr1 (370-402)||(19324572-19324604)
chr1 (296-404)||(19562567-19562672)
chr1 (348-404)||(21038091-21038147)
chr1 (353-385)||(24334705-24334737)
chr1 (370-402)||(25098572-25098604)
chr1 (348-404)||(34712378-34712434)
chr1 (348-404)||(44296490-44296545)
chr1 (353-405)||(52903256-52903308)
[»] chr6 (85 HSPs)
chr6 (299-409)||(8365463-8365575)
chr6 (304-404)||(16766705-16766807)
chr6 (287-405)||(5970040-5970160)
chr6 (295-405)||(8713986-8714099)
chr6 (296-413)||(31384919-31385037)
chr6 (298-404)||(9107313-9107421)
chr6 (349-409)||(10770670-10770730)
chr6 (287-403)||(9629392-9629510)
chr6 (353-409)||(34595137-34595193)
chr6 (306-404)||(9522899-9522999)
chr6 (353-409)||(7801156-7801212)
chr6 (349-409)||(7930308-7930368)
chr6 (296-409)||(8776920-8777029)
chr6 (348-404)||(12696332-12696388)
chr6 (296-404)||(17841541-17841640)
chr6 (353-421)||(28715286-28715354)
chr6 (353-404)||(7977830-7977881)
chr6 (355-409)||(16833311-16833365)
chr6 (296-401)||(10339066-10339174)
chr6 (353-405)||(426514-426566)
chr6 (348-444)||(785450-785541)
chr6 (353-409)||(853859-853915)
chr6 (349-404)||(9911524-9911580)
chr6 (353-404)||(403864-403915)
chr6 (349-404)||(9025490-9025545)
chr6 (347-398)||(19369831-19369882)
chr6 (353-404)||(28152107-28152157)
chr6 (359-409)||(1681761-1681811)
chr6 (358-404)||(31959167-31959213)
chr6 (353-394)||(26402680-26402721)
chr6 (370-419)||(34225826-34225875)
chr6 (353-404)||(6898281-6898332)
chr6 (353-404)||(7265593-7265644)
chr6 (354-409)||(15489733-15489788)
chr6 (349-404)||(21395304-21395358)
chr6 (354-404)||(7938124-7938174)
chr6 (349-414)||(17302554-17302620)
chr6 (359-404)||(1191706-1191751)
chr6 (353-402)||(1700362-1700411)
chr6 (296-404)||(4877950-4878049)
chr6 (353-398)||(6751882-6751927)
chr6 (351-404)||(7151420-7151473)
chr6 (359-404)||(10842540-10842585)
chr6 (370-403)||(16388250-16388283)
chr6 (360-405)||(17341671-17341716)
chr6 (355-404)||(26178683-26178732)
chr6 (348-404)||(2117084-2117139)
chr6 (353-404)||(3209389-3209441)
chr6 (361-405)||(4118341-4118385)
chr6 (353-405)||(6327518-6327570)
chr6 (352-404)||(9617442-9617494)
chr6 (307-404)||(17435207-17435306)
chr6 (348-400)||(26562701-26562753)
chr6 (353-404)||(32978899-32978951)
chr6 (348-404)||(34073342-34073398)
chr6 (349-404)||(7086803-7086858)
chr6 (350-401)||(7973665-7973716)
chr6 (349-404)||(9027186-9027241)
chr6 (353-404)||(12627577-12627628)
chr6 (355-402)||(13364707-13364754)
chr6 (353-404)||(19040360-19040411)
chr6 (354-404)||(24645488-24645539)
chr6 (350-404)||(28862129-28862184)
chr6 (370-405)||(31579242-31579277)
chr6 (353-404)||(32511666-32511717)
chr6 (353-404)||(33001289-33001340)
chr6 (297-404)||(3398627-3398729)
chr6 (361-407)||(6349745-6349791)
chr6 (353-402)||(7027251-7027301)
chr6 (348-402)||(9024171-9024225)
chr6 (350-404)||(9195751-9195805)
chr6 (346-404)||(20576626-20576684)
chr6 (353-398)||(1334675-1334720)
chr6 (296-333)||(13360325-13360362)
chr6 (296-398)||(17327602-17327700)
chr6 (363-404)||(25010212-25010253)
chr6 (348-405)||(32320664-32320721)
chr6 (359-404)||(34446573-34446618)
chr6 (348-404)||(2224234-2224290)
chr6 (370-418)||(5462680-5462728)
chr6 (353-405)||(5732510-5732562)
chr6 (348-380)||(22745989-22746021)
chr6 (357-405)||(25038075-25038123)
chr6 (354-394)||(27904037-27904077)
chr6 (354-394)||(31429004-31429044)
[»] chr3 (77 HSPs)
chr3 (296-409)||(41961591-41961706)
chr3 (353-431)||(51206353-51206431)
chr3 (296-404)||(49651728-49651837)
chr3 (296-404)||(4987232-4987342)
chr3 (299-409)||(10954955-10955056)
chr3 (296-404)||(28918009-28918110)
chr3 (352-441)||(1509511-1509599)
chr3 (295-409)||(28812518-28812634)
chr3 (308-441)||(14832074-14832205)
chr3 (296-445)||(27505211-27505358)
chr3 (296-404)||(34185064-34185174)
chr3 (296-409)||(55401078-55401182)
chr3 (348-409)||(14209116-14209177)
chr3 (352-409)||(34910320-34910377)
chr3 (348-404)||(25948882-25948938)
chr3 (356-404)||(26508118-26508166)
chr3 (350-405)||(15796291-15796346)
chr3 (351-404)||(21256984-21257037)
chr3 (353-405)||(25775515-25775568)
chr3 (348-404)||(3164020-3164076)
chr3 (353-401)||(8587021-8587069)
chr3 (355-403)||(20503474-20503522)
chr3 (353-404)||(7928458-7928509)
chr3 (354-405)||(10268487-10268538)
chr3 (353-404)||(21479126-21479177)
chr3 (349-407)||(39756241-39756299)
chr3 (306-405)||(55212970-55213070)
chr3 (348-409)||(750613-750674)
chr3 (350-415)||(15314873-15314938)
chr3 (353-442)||(45451523-45451612)
chr3 (299-404)||(8039779-8039886)
chr3 (296-409)||(14216895-14217010)
chr3 (296-409)||(14223024-14223139)
chr3 (348-404)||(14829698-14829753)
chr3 (353-409)||(16000016-16000072)
chr3 (349-405)||(16789019-16789075)
chr3 (353-404)||(8383265-8383316)
chr3 (353-404)||(26492205-26492256)
chr3 (287-394)||(40993278-40993376)
chr3 (350-404)||(4990964-4991018)
chr3 (353-395)||(8593154-8593196)
chr3 (370-404)||(14979189-14979223)
chr3 (350-404)||(17005616-17005670)
chr3 (354-404)||(20691327-20691377)
chr3 (353-442)||(13845525-13845614)
chr3 (359-404)||(35994744-35994788)
chr3 (348-404)||(9800048-9800104)
chr3 (353-409)||(10335286-10335342)
chr3 (360-404)||(11610529-11610573)
chr3 (354-398)||(14338484-14338528)
chr3 (349-404)||(14747569-14747625)
chr3 (353-442)||(18426917-18427008)
chr3 (349-404)||(1550148-1550203)
chr3 (370-405)||(4201403-4201438)
chr3 (296-402)||(8789500-8789599)
chr3 (349-404)||(11093578-11093633)
chr3 (361-424)||(21861557-21861620)
chr3 (370-417)||(29508439-29508486)
chr3 (353-404)||(38731226-38731277)
chr3 (354-396)||(3865690-3865732)
chr3 (370-404)||(11251986-11252020)
chr3 (350-404)||(11665952-11666006)
chr3 (352-417)||(8930829-8930894)
chr3 (359-404)||(12704663-12704708)
chr3 (353-413)||(15505790-15505851)
chr3 (348-405)||(16192745-16192802)
chr3 (414-443)||(21479067-21479096)
chr3 (370-440)||(29112297-29112369)
chr3 (359-404)||(34307786-34307831)
chr3 (349-398)||(44427855-44427904)
chr3 (296-344)||(6525635-6525683)
chr3 (296-324)||(8842408-8842436)
chr3 (348-404)||(11313795-11313851)
chr3 (370-406)||(14840308-14840344)
chr3 (368-404)||(21149075-21149111)
chr3 (348-404)||(22774065-22774121)
chr3 (353-405)||(25093509-25093561)
[»] chr4 (68 HSPs)
chr4 (287-442)||(28964191-28964338)
chr4 (297-409)||(19482671-19482785)
chr4 (353-426)||(54580023-54580096)
chr4 (296-404)||(3947713-3947817)
chr4 (348-440)||(4383338-4383431)
chr4 (349-404)||(11596348-11596403)
chr4 (287-409)||(16073398-16073510)
chr4 (355-404)||(29205452-29205501)
chr4 (355-407)||(6485613-6485665)
chr4 (348-404)||(12895111-12895167)
chr4 (292-404)||(21945511-21945614)
chr4 (296-404)||(23292938-23293037)
chr4 (296-394)||(715557-715648)
chr4 (296-394)||(752883-752974)
chr4 (353-424)||(4157138-4157208)
chr4 (353-404)||(12797338-12797388)
chr4 (350-409)||(27706174-27706233)
chr4 (296-394)||(28084540-28084631)
chr4 (296-404)||(30982819-30982929)
chr4 (351-404)||(30298954-30299008)
chr4 (351-404)||(30327822-30327876)
chr4 (348-453)||(22234885-22234993)
chr4 (348-409)||(24613696-24613757)
chr4 (353-394)||(42640547-42640588)
chr4 (353-409)||(12895274-12895330)
chr4 (353-404)||(49431033-49431085)
chr4 (348-404)||(51701266-51701322)
chr4 (353-404)||(2361975-2362026)
chr4 (353-404)||(8423718-8423769)
chr4 (353-404)||(38847012-38847063)
chr4 (361-412)||(40481637-40481687)
chr4 (287-393)||(4157455-4157552)
chr4 (348-406)||(5775353-5775411)
chr4 (348-442)||(15659755-15659849)
chr4 (350-404)||(16303263-16303317)
chr4 (354-404)||(35157986-35158036)
chr4 (348-398)||(37496718-37496768)
chr4 (353-398)||(6879465-6879510)
chr4 (296-394)||(19312353-19312453)
chr4 (349-405)||(28000738-28000795)
chr4 (353-406)||(40179636-40179689)
chr4 (299-427)||(15724498-15724624)
chr4 (296-404)||(847959-848069)
chr4 (370-405)||(903929-903964)
chr4 (296-335)||(3064880-3064919)
chr4 (353-404)||(15029773-15029824)
chr4 (370-405)||(22440617-22440652)
chr4 (297-344)||(29205527-29205574)
chr4 (361-404)||(37203272-37203315)
chr4 (348-404)||(50280889-50280947)
chr4 (348-394)||(11797623-11797669)
chr4 (370-404)||(14465092-14465126)
chr4 (354-404)||(33950144-33950194)
chr4 (370-404)||(36635332-36635366)
chr4 (349-442)||(46083987-46084081)
chr4 (354-404)||(47263994-47264044)
chr4 (360-397)||(10164861-10164898)
chr4 (349-394)||(12708165-12708210)
chr4 (353-398)||(13307891-13307936)
chr4 (360-405)||(14126118-14126163)
chr4 (354-403)||(30103358-30103406)
chr4 (414-443)||(46160852-46160881)
chr4 (348-404)||(7012074-7012130)
chr4 (348-404)||(18513236-18513292)
chr4 (368-404)||(20743293-20743329)
chr4 (370-402)||(24999054-24999086)
chr4 (368-404)||(31243563-31243599)
chr4 (353-409)||(34306804-34306859)
[»] chr2 (64 HSPs)
chr2 (296-404)||(30717471-30717581)
chr2 (296-403)||(37419752-37419861)
chr2 (296-409)||(26769514-26769629)
chr2 (296-427)||(2438671-2438793)
chr2 (287-404)||(15657872-15657991)
chr2 (348-409)||(23058437-23058499)
chr2 (295-409)||(36756284-36756400)
chr2 (348-404)||(12668418-12668474)
chr2 (353-409)||(15972876-15972932)
chr2 (353-409)||(18421966-18422022)
chr2 (353-405)||(30404850-30404902)
chr2 (350-409)||(974750-974809)
chr2 (353-409)||(19536397-19536454)
chr2 (351-404)||(20539672-20539725)
chr2 (353-443)||(37558938-37559036)
chr2 (354-414)||(18841014-18841074)
chr2 (348-404)||(33153432-33153488)
chr2 (296-404)||(11223805-11223914)
chr2 (296-424)||(44860308-44860438)
chr2 (348-404)||(4882691-4882747)
chr2 (295-404)||(18420374-18420485)
chr2 (360-404)||(21374706-21374750)
chr2 (353-409)||(30335420-30335476)
chr2 (295-392)||(34784922-34785021)
chr2 (296-397)||(35056883-35056986)
chr2 (296-404)||(38117111-38117210)
chr2 (359-427)||(12940941-12941011)
chr2 (346-397)||(32749818-32749869)
chr2 (353-404)||(5040740-5040793)
chr2 (354-404)||(18889592-18889642)
chr2 (370-404)||(28677917-28677951)
chr2 (359-404)||(10535765-10535810)
chr2 (348-404)||(14996218-14996275)
chr2 (365-442)||(29367381-29367461)
chr2 (353-398)||(43586005-43586050)
chr2 (353-409)||(5473331-5473387)
chr2 (353-417)||(18255980-18256044)
chr2 (353-409)||(20473325-20473381)
chr2 (348-404)||(24894397-24894453)
chr2 (360-404)||(39323272-39323316)
chr2 (353-404)||(5367200-5367251)
chr2 (359-402)||(11308010-11308053)
chr2 (355-398)||(14450797-14450840)
chr2 (349-404)||(18622614-18622669)
chr2 (370-405)||(28412357-28412392)
chr2 (349-404)||(29970545-29970600)
chr2 (353-404)||(34691805-34691856)
chr2 (353-404)||(34714217-34714268)
chr2 (372-406)||(2331800-2331834)
chr2 (370-404)||(21616770-21616804)
chr2 (370-404)||(21782835-21782869)
chr2 (355-405)||(29176495-29176545)
chr2 (354-404)||(42832277-42832327)
chr2 (353-394)||(21624285-21624326)
chr2 (348-405)||(30527590-30527647)
chr2 (355-404)||(34006993-34007042)
chr2 (368-405)||(36281692-36281729)
chr2 (355-404)||(44605141-44605190)
chr2 (353-390)||(44635520-44635557)
chr2 (356-404)||(23718034-23718082)
chr2 (356-404)||(24105706-24105754)
chr2 (370-402)||(36409644-36409676)
chr2 (353-409)||(38442310-38442366)
chr2 (370-406)||(40361771-40361807)
[»] chr8 (58 HSPs)
chr8 (350-424)||(25566829-25566903)
chr8 (296-443)||(15816070-15816221)
chr8 (296-404)||(22651984-22652094)
chr8 (349-404)||(2572052-2572107)
chr8 (353-404)||(4948660-4948711)
chr8 (296-404)||(29510245-29510355)
chr8 (353-443)||(36450754-36450852)
chr8 (352-404)||(8342980-8343032)
chr8 (348-404)||(13436959-13437015)
chr8 (353-404)||(20873077-20873128)
chr8 (352-404)||(8343324-8343376)
chr8 (296-405)||(11927027-11927138)
chr8 (355-403)||(40332200-40332248)
chr8 (354-405)||(4298887-4298938)
chr8 (297-405)||(11944672-11944782)
chr8 (353-404)||(30077387-30077438)
chr8 (355-424)||(31514860-31514930)
chr8 (359-405)||(41831946-41831992)
chr8 (348-409)||(29447105-29447166)
chr8 (295-404)||(4673365-4673476)
chr8 (353-409)||(18170482-18170538)
chr8 (353-409)||(18634050-18634106)
chr8 (353-405)||(24669440-24669492)
chr8 (348-403)||(17468503-17468558)
chr8 (349-404)||(21465420-21465475)
chr8 (353-404)||(22596002-22596053)
chr8 (353-404)||(24613529-24613579)
chr8 (349-404)||(30271287-30271342)
chr8 (354-405)||(31557004-31557054)
chr8 (354-404)||(20679396-20679446)
chr8 (354-404)||(22197743-22197793)
chr8 (348-394)||(24858030-24858075)
chr8 (353-406)||(4786338-4786391)
chr8 (353-431)||(5813571-5813651)
chr8 (359-404)||(18407727-18407772)
chr8 (348-404)||(28745506-28745562)
chr8 (353-404)||(3025559-3025610)
chr8 (349-404)||(5307069-5307123)
chr8 (353-404)||(12985400-12985451)
chr8 (353-404)||(13844596-13844647)
chr8 (355-402)||(22493504-22493551)
chr8 (349-404)||(31548289-31548344)
chr8 (353-404)||(34897093-34897144)
chr8 (412-442)||(2572141-2572171)
chr8 (370-404)||(14134707-14134741)
chr8 (370-440)||(6065674-6065746)
chr8 (355-404)||(7442853-7442902)
chr8 (353-404)||(10002163-10002215)
chr8 (348-424)||(16641969-16642045)
chr8 (350-405)||(16867202-16867260)
chr8 (368-404)||(18646180-18646216)
chr8 (348-404)||(24362197-24362253)
chr8 (356-404)||(25192350-25192398)
chr8 (352-392)||(26902174-26902214)
chr8 (349-405)||(28384990-28385046)
chr8 (356-404)||(31236580-31236628)
chr8 (353-405)||(33405384-33405436)
chr8 (368-424)||(40063939-40063995)
[»] scaffold0450 (1 HSPs)
scaffold0450 (296-409)||(8576-8691)
[»] scaffold0223 (1 HSPs)
scaffold0223 (339-404)||(20180-20245)
[»] scaffold0019 (1 HSPs)
scaffold0019 (296-404)||(71731-71843)
[»] scaffold0361 (1 HSPs)
scaffold0361 (362-447)||(14492-14580)
[»] scaffold0027 (1 HSPs)
scaffold0027 (353-405)||(46689-46741)
[»] scaffold0025 (1 HSPs)
scaffold0025 (350-405)||(23776-23832)
[»] scaffold0011 (1 HSPs)
scaffold0011 (354-414)||(17750-17810)
[»] scaffold0652 (1 HSPs)
scaffold0652 (353-404)||(462-513)
[»] scaffold0003 (1 HSPs)
scaffold0003 (296-404)||(241602-241712)
[»] scaffold0021 (2 HSPs)
scaffold0021 (356-405)||(130489-130538)
scaffold0021 (414-442)||(130426-130454)
[»] scaffold0793 (1 HSPs)
scaffold0793 (296-394)||(4833-4924)
[»] scaffold0050 (1 HSPs)
scaffold0050 (353-405)||(70285-70337)
[»] scaffold0103 (1 HSPs)
scaffold0103 (361-404)||(51819-51862)
[»] scaffold0044 (1 HSPs)
scaffold0044 (348-403)||(53189-53244)
[»] scaffold0008 (1 HSPs)
scaffold0008 (296-404)||(263313-263423)
[»] scaffold0171 (2 HSPs)
scaffold0171 (348-394)||(23438-23484)
scaffold0171 (352-394)||(23529-23571)
[»] scaffold0018 (2 HSPs)
scaffold0018 (348-409)||(178813-178875)
scaffold0018 (360-405)||(192256-192301)
[»] scaffold0086 (1 HSPs)
scaffold0086 (296-394)||(2946-3046)
[»] scaffold0306 (1 HSPs)
scaffold0306 (353-409)||(13403-13459)
[»] scaffold0152 (1 HSPs)
scaffold0152 (353-409)||(21868-21924)
[»] scaffold0512 (1 HSPs)
scaffold0512 (295-346)||(4987-5038)
[»] scaffold0246 (1 HSPs)
scaffold0246 (361-412)||(19576-19626)
[»] scaffold0236 (1 HSPs)
scaffold0236 (350-405)||(25765-25820)
[»] scaffold0053 (2 HSPs)
scaffold0053 (353-404)||(8806-8857)
scaffold0053 (414-445)||(8739-8770)
[»] scaffold0036 (1 HSPs)
scaffold0036 (296-404)||(9688-9798)
[»] scaffold0020 (1 HSPs)
scaffold0020 (349-404)||(135308-135363)
[»] scaffold0049 (2 HSPs)
scaffold0049 (348-402)||(56932-56986)
scaffold0049 (354-404)||(63781-63831)
[»] scaffold0004 (3 HSPs)
scaffold0004 (360-442)||(92775-92859)
scaffold0004 (352-400)||(83172-83220)
scaffold0004 (354-390)||(123650-123686)
[»] scaffold0123 (1 HSPs)
scaffold0123 (348-400)||(44520-44572)
[»] scaffold0122 (1 HSPs)
scaffold0122 (353-409)||(8013-8068)
[»] scaffold0722 (1 HSPs)
scaffold0722 (353-404)||(7032-7083)
[»] scaffold0066 (1 HSPs)
scaffold0066 (365-404)||(33375-33414)
[»] scaffold0314 (1 HSPs)
scaffold0314 (348-398)||(8962-9012)
[»] scaffold1528 (1 HSPs)
scaffold1528 (371-404)||(1043-1076)
[»] scaffold0227 (1 HSPs)
scaffold0227 (361-442)||(7319-7403)
[»] scaffold0116 (1 HSPs)
scaffold0116 (414-447)||(9837-9870)
[»] scaffold0083 (1 HSPs)
scaffold0083 (353-386)||(45530-45563)
[»] scaffold0126 (1 HSPs)
scaffold0126 (349-405)||(19152-19207)
[»] scaffold0022 (1 HSPs)
scaffold0022 (370-406)||(90849-90885)


Alignment Details
Target: chr7 (Bit Score: 337; Significance: 0; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 26 - 450
Target Start/End: Complemental strand, 7058812 - 7058388
Alignment:
Q  26 tatgaatgttggaaagttgcttaaatttgtgaattactgtcaagagagcatattttgcaatgaatgtagtagttgaataaaagtgcttctttaatcttgg 125  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||    
T  7058812 tatgaatgttggaaagttgcttaaatttatgaattactgtcaagagagcatattttgcaatcaacgtagtagtcgaataaaagtgcttctttaatcttgg 7058713  T
Q  126 tgtgttgtgggcaagttttaaagatcttacttaagatgatcaaattatatttgagtttatattggaatgggtgaagtttagctggtattagtattcatga 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||    
T  7058712 tgtgttgtgggcaagttttaaagatcttacttaagatgatcaaattatatttgagtttatattggaatggttgaagtttagcttgtattaggattcatga 7058613  T
Q  226 ttagagagacttcatatgctagctggtttgtgtattagaagagctttgagtttaatttagttgaatcatagacactcctcggattaggcgtgtctcaatg 325  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||| ||||||    
T  7058612 ttagacagacttcatatggtagctggtttgtgtattagaagagctttgagtttgatttagttgaaccatagacactccttggattaggcgtgtgtcaatg 7058513  T
Q  326 tcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgtccgtgtcc 425  Q
    |||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||  ||||||||||||||||||| |||||||||||| ||||||     
T  7058512 tcggacatgtgttgtgtccgatcgacacgacaccaacacttgtaattacactgaattacatgattttttcaaattattagttgtatcagtgttcgtgtct 7058413  T
Q  426 gtatccatgcttcataggttttgac 450  Q
    |||||||| ||||||||||||||||    
T  7058412 gtatccatacttcataggttttgac 7058388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 26 - 222
Target Start/End: Complemental strand, 7029403 - 7029204
Alignment:
Q  26 tatgaatgttggaaagttgcttaaatttgtgaattactgtcaagagagcatattttgcaatgaatgtagtagt---tgaataaaagtgcttctttaatct 122  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||   |||||| ||||| |||||||||||    
T  7029403 tatgaatgttggaaagttgcttaaatttatgaattactgtcaagagagcatattttgcaatgaatgtagtagtagttgaatagaagtggttctttaatct 7029304  T
Q  123 tggtgtgttgtgggcaagttttaaagatcttacttaagatgatcaaattatatttgagtttatattggaatgggtgaagtttagctggtattagtattca 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| | |||||||| |||||||||||||||    
T  7029303 tggtgtgttgtgggcaagttttaaagatcttacttaagatgatcaaattatagttgagtttatgttggaatggttaaagtttagatggtattagtattca 7029204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 26 - 222
Target Start/End: Complemental strand, 7014045 - 7013846
Alignment:
Q  26 tatgaatgttggaaagttgcttaaatttgtgaattactgtcaagagagcatattttgcaatgaatgtagtagt---tgaataaaagtgcttctttaatct 122  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||   |||||| ||||| |||||||||||    
T  7014045 tatgaatgttggaaagttgcttaaatttatgaattactgtcaagagagcatattttgcaatgaatgtagtagtagttgaatagaagtggttctttaatct 7013946  T
Q  123 tggtgtgttgtgggcaagttttaaagatcttacttaagatgatcaaattatatttgagtttatattggaatgggtgaagtttagctggtattagtattca 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||| | |||||||| |||||||||||||||    
T  7013945 tggtgtgttgtgggcaagttttaaagatcttacttaagatgatcaaattatagttgagtttatgttgaaatggttaaagtttagatggtattagtattca 7013846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 296 - 424
Target Start/End: Complemental strand, 9778612 - 9778488
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    ||||||||| |||||||||||||| |  ||||||||| || ||||||||||    |||||||||||||||||| |||| |||||||||||||||||||||    
T  9778612 gacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccga----cacgacaccgacacttgtaattatactgaattatgtgattttttc 9778517  T
Q  396 aaattattaattgtatcagtgtccgtgtc 424  Q
    ||||||| |  ||| ||||||||||||||    
T  9778516 aaattatcagctgtgtcagtgtccgtgtc 9778488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 296 - 405
Target Start/End: Complemental strand, 2334367 - 2334255
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat-cgacacgacaccgacacttgtgattacactgaattatgtgatt--tt 392  Q
    ||||||||||||||||| ||||| ||| |||||||||||| | ||||||||  ||||||||||||||||||||| |||||||| ||||||||||||  ||    
T  2334367 gacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgacacgacacgacaccgacacttgtaattacactaaattatgtgatttttt 2334268  T
Q  393 ttcaaattattaa 405  Q
    |||||||||||||    
T  2334267 ttcaaattattaa 2334255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 296 - 414
Target Start/End: Original strand, 5409783 - 5409897
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    |||||||||||||||||||||||| |  ||||||||| || | ||||||||    |||||||||||||||||| ||| ||||||||||||||||||||||    
T  5409783 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccga----cacgacaccgacacttgtaattgcactgaattatgtgattttttc 5409878  T
Q  396 aaattattaattgtatcag 414  Q
    |||||||||  ||||||||    
T  5409879 aaattattagctgtatcag 5409897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 298 - 404
Target Start/End: Complemental strand, 24339758 - 24339650
Alignment:
Q  298 cactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    |||||||||||||||||||||| |  ||||||| | || | ||||||||   ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24339758 cactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttc 24339659  T
Q  396 aaattatta 404  Q
    |||||||||    
T  24339658 aaattatta 24339650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 348 - 431
Target Start/End: Original strand, 26033456 - 26033539
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgtccgtgtccgtatcc 431  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||  ||  |||||||||||||| ||||||    
T  26033456 cgacacgagaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgcgtcagtgtccgtgtctgtatcc 26033539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 352 - 444
Target Start/End: Complemental strand, 19992061 - 19991968
Alignment:
Q  352 acgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtat-cagtgtccgtgtccgtatccatgcttcataggt 444  Q
    ||||||||||||||| | ||||||||||| ||||||||||| |||||||||||  ||| | ||||| |||||||||||||||||||||||||||    
T  19992061 acgacaccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgtccagtgcccgtgtccgtatccatgcttcataggt 19991968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 353 - 449
Target Start/End: Complemental strand, 19213862 - 19213766
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgtccgtgtccgtatccatgcttcataggttttga 449  Q
    ||||||||||||||||  |||||||| ||||||||||||||| |||||||||   || |||||||||||||||| |||| |||||||||| ||||||    
T  19213862 cgacaccgacacttgtatttacactgcattatgtgattttttaaaattattagcagtgtcagtgtccgtgtccgcatccgtgcttcatagattttga 19213766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 7063285 - 7063227
Alignment:
Q  55 tgaattactgtcaagagagcatattttgcaatgaatgtagtagttgaataaaagtgctt 113  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7063285 tgaataactgtcaagagagcatattttgcaatgaacgtagtagttgaataaaagtgctt 7063227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 9408333 - 9408390
Alignment:
Q  352 acgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  9408333 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgt 9408390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 348 - 424
Target Start/End: Original strand, 11890914 - 11890990
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgtccgtgtc 424  Q
    |||||||||||| |||||  | ||||||||||||||| ||||||||||||||||||||  |||||||||||||||||    
T  11890914 cgacacgacacctacactcataattacactgaattatatgattttttcaaattattaaccgtatcagtgtccgtgtc 11890990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 13770803 - 13770699
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    ||||||| |||||||||||||||  |  ||||||||| || ||||||||||    ||||||| |||||||||| ||||||||||||||||| |||||||     
T  13770803 gacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccga----cacgacaacgacacttgtaattacactgaattatgtaattttttt 13770708  T
Q  396 aaattatta 404  Q
    |||||||||    
T  13770707 aaattatta 13770699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 43027416 - 43027520
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    ||||||| |||||||||||||||| |  ||||||||| || | |||||     ||||||||||||||||||||  |||||||| ||||||||||||||||    
T  43027416 gacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc----tgacacgacaccgacacttgtatttacactgcattatgtgattttttc 43027511  T
Q  396 aaattatta 404  Q
    |||||||||    
T  43027512 aaattatta 43027520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 404
Target Start/End: Complemental strand, 20549896 - 20549799
Alignment:
Q  298 cactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttcaa 397  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||         |||||||||||| | | |||||||||||||| |||||||| ||||    
T  20549896 cactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtc---------cgacaccgacacatataattacactgaattacgtgattttctcaa 20549806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 3991384 - 3991327
Alignment:
Q  352 acgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  3991384 acgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagttgt 3991327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 348 - 405
Target Start/End: Complemental strand, 7438770 - 7438713
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    ||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  7438770 cgacatgacaccgacacttgtaattacattgaattatgtgattttttcaaattattaa 7438713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 348 - 404
Target Start/End: Complemental strand, 18039063 - 18039006
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgatt-ttttcaaattatta 404  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  18039063 cgacacgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatta 18039006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 297 - 409
Target Start/End: Original strand, 32093967 - 32094077
Alignment:
Q  297 acactcctcggattaggcgtgtctcaa-tgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtga-tttttt 394  Q
    ||||||||||||||||||||||| |   ||||||||| || | ||||||||    ||||||||||||| |||| ||||||||||||||||||| ||||||    
T  32093967 acactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccga----cacgacaccgacatttgtaattacactgaattatgtgattttttt 32094062  T
Q  395 caaattattaattgt 409  Q
    |||||||||| ||||    
T  32094063 caaattattagttgt 32094077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 349 - 404
Target Start/End: Original strand, 18215182 - 18215237
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||||||| | ||||||| |||||||||||||||||||||||||    
T  18215182 gacacgacaccgacacttgtaactacactgcattatgtgattttttcaaattatta 18215237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 25481961 - 25481910
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  25481961 cgacaccaacacttgtaattacactgaattatgtgattttttcaaattatta 25481910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 349 - 404
Target Start/End: Complemental strand, 27945104 - 27945049
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  27945104 gacacgacaccgacacttgtaattacactgaattatgtaattttctcaaattatta 27945049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 404
Target Start/End: Complemental strand, 32308237 - 32308128
Alignment:
Q  297 acactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    ||||||||||||||||  |||||||  |||||||||||| | |||||| |   ||||||||||| ||||| |   ||||||||||||||||||||||| |    
T  32308237 acactcctcggattagctgtgtctcggtgtcggacatgtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaattatgtgattttct 32308138  T
Q  395 caaattatta 404  Q
    ||||||||||    
T  32308137 caaattatta 32308128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 402
Target Start/End: Original strand, 11272581 - 11272637
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaat--tatgtgattttttcaaattat 402  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  11272581 cgacacgacaccgacacttgtaattacactgaattatatgtgattttttcaaattat 11272637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 398
Target Start/End: Complemental strand, 1885635 - 1885587
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgattttttcaaa 398  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  1885635 acacgacaccgacacttgtgattacattgaattatgtcattttttcaaa 1885587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 348 - 424
Target Start/End: Complemental strand, 13300474 - 13300398
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgtccgtgtc 424  Q
    ||||| |||||||| ||| || ||||||||||||||| ||||||||||||||||||| || | ||||| ||||||||    
T  13300474 cgacatgacaccgagactggtaattacactgaattatatgattttttcaaattattagttatgtcagtatccgtgtc 13300398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 296 - 409
Target Start/End: Complemental strand, 25822773 - 25822658
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    |||||||||  |||||||| |||| | ||||| |||| || | |||||||||  ||| ||||||||||||||||| ||||||||||||| ||   |||||    
T  25822773 gacactccttagattaggcatgtcccgatgtcagacacgtgtcgtgtccgataccgatacgacaccgacacttgtaattacactgaattgtgattttttt 25822674  T
Q  394 tcaaattattaattgt 409  Q
    ||||||||||| ||||    
T  25822673 tcaaattattagttgt 25822658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 21880211 - 21880160
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  21880211 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattatta 21880160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 354 - 404
Target Start/End: Original strand, 11061077 - 11061127
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||| |||| ||| ||||||||||||||||||||||||||    
T  11061077 gacaccgacacttgtaattatactaaattatgtgattttttcaaattatta 11061127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 414
Target Start/End: Original strand, 11665435 - 11665501
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcag 414  Q
    ||||| |||| |||||||| | |||| |||||||||||||||||||||||||||||| |||| ||||    
T  11665435 cgacatgacatcgacacttataattagactgaattatgtgattttttcaaattattagttgtgtcag 11665501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 394
Target Start/End: Complemental strand, 21560563 - 21560521
Alignment:
Q  352 acgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  21560563 acgacaccgacacttgtaattacactgaattatgtgatttttt 21560521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 409
Target Start/End: Complemental strand, 8234205 - 8234149
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    |||||||| ||||||| | ||||||||||||||| ||||||||||||||||| ||||    
T  8234205 cgacaccggcacttgtaactacactgaattatgttattttttcaaattattagttgt 8234149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 399
Target Start/End: Original strand, 22602704 - 22602756
Alignment:
Q  347 tcgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaat 399  Q
    |||||||||||||||||| | | ||||||||||||||||||||||| ||||||    
T  22602704 tcgacacgacaccgacacatataattacactgaattatgtgattttctcaaat 22602756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 28155629 - 28155578
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||| ||||||| ||||||||| ||||| |||||||||||    
T  28155629 cgacaccgacacttgtaattacaccgaattatgtaattttctcaaattatta 28155578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 7063222 - 7063173
Alignment:
Q  181 tttatattggaatgggtgaagtttagctggtattagtattcatgattaga 230  Q
    ||||||||||||||| | |||||||  |||||||||||||||||||||||    
T  7063222 tttatattggaatggttaaagtttaaatggtattagtattcatgattaga 7063173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 404
Target Start/End: Complemental strand, 15902910 - 15902830
Alignment:
Q  326 tcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||| ||||| | |||||||||  |||||| |||||||||| | | |||||||| |||||||||||||| |||||||||||    
T  15902910 tcgggcatgtgtcgtgtccgataccgacacaacaccgacacatataattacactaaattatgtgattttatcaaattatta 15902830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 35862024 - 35861967
Alignment:
Q  352 acgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    ||||||| |||||||   |||||| |||||||||||||||||||||||||||| ||||    
T  35862024 acgacacagacacttacaattacattgaattatgtgattttttcaaattattagttgt 35861967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 405
Target Start/End: Complemental strand, 6028688 - 6028632
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    ||||||||||||||| |||| |||||| | |||||||| || |||||||||||||||    
T  6028688 gacacgacaccgacatttgtaattacattaaattatgttatattttcaaattattaa 6028632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 7328686 - 7328742
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||| | | |||||||| |||||||| ||||| |||||||||||    
T  7328686 cgacacgacaccgacacatataattacactaaattatgttattttctcaaattatta 7328742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 445
Target Start/End: Complemental strand, 11700845 - 11700765
Alignment:
Q  370 attacactgaattatgtgattttttcaaattattaattgtatcagtgtc-----cgtgtccgtatccatgcttcataggtt 445  Q
    |||||| |||||||||||||||| ||||||||||||  || |||| |||     ||||||||||||| |||||||||||||    
T  11700845 attacattgaattatgtgattttgtcaaattattaacggtgtcagcgtccgtgtcgtgtccgtatccgtgcttcataggtt 11700765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 404
Target Start/End: Complemental strand, 16341560 - 16341504
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||| ||| | | |||||||| |||||||||||||| |||||||||||    
T  16341560 cgacacgacaccggcacatataattacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 398
Target Start/End: Complemental strand, 48438604 - 48438560
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaa 398  Q
    ||||||||||| ||| |||||| ||||||||||||||||||||||    
T  48438604 gacaccgacacgtgtaattacattgaattatgtgattttttcaaa 48438560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 7197297 - 7197348
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||| |||||| |||||||  ||||||||| |||||||||    
T  7197297 cgacaccgacacttgtaattacattgaattaaatgatttttttaaattatta 7197348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 15680868 - 15680817
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||| | |||||||| ||||||||||||||||  ||||||||    
T  15680868 cgacaccgacacttataattacactaaattatgtgattttttttaattatta 15680817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 404
Target Start/End: Original strand, 18013070 - 18013125
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||| ||||| | | ||||||||||||||||| ||||||| |||||||||    
T  18013070 gacacgacactgacacatataattacactgaattatgtaatttttttaaattatta 18013125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 24105737 - 24105686
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||| ||||||||||| |||||||||||| |||  |||||||||||||||||    
T  24105737 cgactccgacacttgtaattacactgaatcatgcaattttttcaaattatta 24105686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 392
Target Start/End: Complemental strand, 25956504 - 25956465
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgatttt 392  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  25956504 cgacaccgacacttgtgattacattgaattatgtcatttt 25956465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 26733363 - 26733312
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||| | | |||| |||||||||||||||||| |||||||||||    
T  26733363 cgacaccgacacatttaattagactgaattatgtgattttgtcaaattatta 26733312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 401
Target Start/End: Complemental strand, 33994270 - 33994223
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaatta 401  Q
    ||||||||||||||| ||| |||||||||||||||  |||||||||||    
T  33994270 gacaccgacacttgtaattgcactgaattatgtgaccttttcaaatta 33994223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 409
Target Start/End: Original strand, 35297669 - 35297728
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    |||||||||| |||| | | |||| | |||||||||||||||| ||||||||||||||||    
T  35297669 acacgacaccaacacatataattataatgaattatgtgattttctcaaattattaattgt 35297728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 404
Target Start/End: Original strand, 36013799 - 36013850
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttt-tcaaattatta 404  Q
    ||||||||||| |||||||||| |||||||||| |||||| |||||||||||    
T  36013799 gacaccgacacgtgtgattacattgaattatgtcatttttctcaaattatta 36013850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 404
Target Start/End: Complemental strand, 1401083 - 1401033
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||| |||| | ||||||||||||||||||| ||| |||||||||||    
T  1401083 gacaccgatacttataattacactgaattatgtgagtttctcaaattatta 1401033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 404
Target Start/End: Complemental strand, 2424656 - 2424622
Alignment:
Q  370 attacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||||||||| |||||||||||    
T  2424656 attacactgaattatgtgattttctcaaattatta 2424622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 402
Target Start/End: Complemental strand, 5548740 - 5548686
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattat 402  Q
    ||||||||||| ||||| | | ||||||||||||||| ||||||| |||||||||    
T  5548740 cgacacgacactgacacatataattacactgaattatttgattttctcaaattat 5548686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 404
Target Start/End: Original strand, 6630854 - 6630963
Alignment:
Q  297 acactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    ||||||||| ||||||| ||||||   |||||| || || ||||||||||   | |||||||| |||||| | | |||||||||||||| |||| ||| |    
T  6630854 acactcctcagattaggtgtgtcttggtgtcgggcacgtgttgtgtccgacaccaacacgacatcgacacatataattacactgaattaagtgactttct 6630953  T
Q  395 caaattatta 404  Q
    ||||||||||    
T  6630954 caaattatta 6630963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 11831481 - 11831435
Alignment:
Q  363 acttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    |||||| |||||||| |||||| ||||||||||||||||||| ||||    
T  11831481 acttgtaattacactaaattatatgattttttcaaattattagttgt 11831435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 404
Target Start/End: Original strand, 23128658 - 23128712
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||| |||||||||| | ||||||||||||||||| || |||| |||||||||||    
T  23128658 acacaacaccgacacatatgattacactgaattatatggttttctcaaattatta 23128712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 404
Target Start/End: Original strand, 29787386 - 29787420
Alignment:
Q  370 attacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||||||||| |||||||||||    
T  29787386 attacactgaattatgtgattttctcaaattatta 29787420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 403
Target Start/End: Original strand, 40287361 - 40287406
Alignment:
Q  357 accgacacttgtgattacactgaattatgtgattttttcaaattatt 403  Q
    |||||||||||| ||||||||||| ||| ||||||||||||||||||    
T  40287361 accgacacttgtaattacactgaa-tatatgattttttcaaattatt 40287406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 405
Target Start/End: Complemental strand, 1433518 - 1433461
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    ||||||||||||||||| | | |||||||  ||| |||||||||| ||||||||||||    
T  1433518 cgacacgacaccgacacatataattacaccaaatgatgtgattttctcaaattattaa 1433461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 398
Target Start/End: Original strand, 5937421 - 5937466
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaa 398  Q
    |||||| |||||||||||||||| |||||||||| ||||| |||||    
T  5937421 cgacacagacacttgtgattacattgaattatgtcattttctcaaa 5937466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 9482993 - 9482944
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattat 402  Q
    |||||||||||| | | ||||||||||||| ||||||||| |||||||||    
T  9482993 cgacaccgacacatataattacactgaattgtgtgattttctcaaattat 9482944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 10043051 - 10042945
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    |||| |||| ||||||| |||||| |  |||||||||||| | || |||| |  ||||||||| ||||||| | ||||| || |||||||||| ||| ||    
T  10043051 gacattccttggattagacgtgtcccggtgtcggacatgtgtcgtatccggt--acacgacactgacacttataattacgctaaattatgtgaatttatc 10042954  T
Q  396 aaattatta 404  Q
    |||||||||    
T  10042953 aaattatta 10042945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 394
Target Start/End: Original strand, 17257985 - 17258030
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    |||| ||||||||||||| |||||||| |||||||||| |||||||    
T  17257985 gacatgacaccgacacttatgattacattgaattatgttatttttt 17258030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 401
Target Start/End: Complemental strand, 17307957 - 17307904
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaatta 401  Q
    |||||||||||| |||| | | ||||||||||||||||| ||||| ||||||||    
T  17307957 cgacacgacaccaacacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 405
Target Start/End: Original strand, 26329377 - 26329434
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    ||||||||| ||||||| | | ||||||||||||| |||| |||| ||||||||||||    
T  26329377 cgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaa 26329434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 403
Target Start/End: Complemental strand, 30731079 - 30731046
Alignment:
Q  370 attacactgaattatgtgattttttcaaattatt 403  Q
    ||||||||||||||||||||||| ||||||||||    
T  30731079 attacactgaattatgtgattttctcaaattatt 30731046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 362 - 394
Target Start/End: Original strand, 13557750 - 13557782
Alignment:
Q  362 cacttgtgattacactgaattatgtgatttttt 394  Q
    ||||||| |||||||||||||||||||||||||    
T  13557750 cacttgtaattacactgaattatgtgatttttt 13557782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 369 - 404
Target Start/End: Complemental strand, 22306575 - 22306539
Alignment:
Q  369 gattacactgaattatgtgatt-ttttcaaattatta 404  Q
    |||||||||||||||||||||| ||||||||||||||    
T  22306575 gattacactgaattatgtgatttttttcaaattatta 22306539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 31808504 - 31808560
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||| |||| |||||||||| ||| || ||| ||||| |||||||||||    
T  31808504 cgacacgacaccaacacatgtgattacattgacttgtgtcattttctcaaattatta 31808560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 296 - 405
Target Start/End: Original strand, 3790 - 3901
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    |||||||||||||||||||||||||| ||||||||||||| | ||||||||   | ||||||||| ||||||||| ||||||||||||||||||||||||    
T  3790 gacactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacacgacactgacacttgtaattacactgaattatgtgattttt 3889  T
Q  394 tcaaattattaa 405  Q
    | ||||||||||    
T  3890 ttaaattattaa 3901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 9e-31; HSPs: 70)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 296 - 442
Target Start/End: Complemental strand, 39698659 - 39698509
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    ||||||||||||||||||||||||||  ||||||| |  | | ||||||||   ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  39698659 gacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttt 39698560  T
Q  394 tcaaattattaattgtatca--gtgtccgtgtccgtatccatgcttcatag 442  Q
    |||||||||||  ||| |||  ||||| |||||||||||| ||||||||||    
T  39698559 tcaaattattagctgtgtcagcgtgtcagtgtccgtatccgtgcttcatag 39698509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 31084435 - 31084331
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    ||||||||||||||||||| |||| || ||||||||| || | ||||||||    ||||||| |||||||||| |||||| |||||||||||||||||||    
T  31084435 gacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccga----cacgacatcgacacttgtaattacattgaattatgtgattttttc 31084340  T
Q  396 aaattatta 404  Q
    |||||||||    
T  31084339 aaattatta 31084331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 300 - 442
Target Start/End: Complemental strand, 7677819 - 7677677
Alignment:
Q  300 ctcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaa 397  Q
    |||||||||||||||||||| |  ||||||||||||   ||||| ||   ||||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  7677819 ctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacacgacaccgacacttctaattgcactgaattatgtgattttttcaa 7677720  T
Q  398 attattaattgtatcagtgtccgtgtccgtatccatgcttcatag 442  Q
    |||||||  ||| ||   |||||||||||| ||| ||||||||||    
T  7677719 attattagctgtgtc--ggtccgtgtccgtttccgtgcttcatag 7677677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 21191008 - 21191107
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    |||||||||||||||||||||||| |   |||||||| || ||||||||||         ||||||||||||| ||||||||||||||||||||||||||    
T  21191008 gacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccga---------caccgacacttgtaattacactgaattatgtgattttttc 21191098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 6247681 - 6247630
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6247681 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 6247630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 404
Target Start/End: Original strand, 13287395 - 13287450
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  13287395 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 13287450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 354 - 442
Target Start/End: Complemental strand, 42893418 - 42893328
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatc--agtgtccgtgtccgtatccatgcttcatag 442  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||  ||| ||   |||||||||||| ||||| ||||||||||    
T  42893418 gacaccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgtcggtgtgtccgtgtccatatccgtgcttcatag 42893328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 409
Target Start/End: Complemental strand, 30183668 - 30183552
Alignment:
Q  295 agacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgatttt 392  Q
    ||||||| |||| |||||||||||| || ||||||||| || | ||||| |||  | ||||||||||||||||||| |||| || |||| ||||||| ||    
T  30183668 agacacttctcgaattaggcgtgtcccagtgtcggacacgtgtcgtgtctgataccaacacgacaccgacacttgtaattaaaccgaataatgtgatatt 30183569  T
Q  393 ttcaaattattaattgt 409  Q
    |||||||||||| ||||    
T  30183568 ttcaaattattagttgt 30183552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 445
Target Start/End: Original strand, 21351900 - 21351993
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgtccgtgtccgtatccatgcttcataggtt 445  Q
    ||||| ||||||||||||||| ||||||||||||||||||| |||||| |||||||| |||| || ||    ||||| || |||||||||||||||||    
T  21351900 cgacatgacaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtcggt----gtgtcagtgtccatgcttcataggtt 21351993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 409
Target Start/End: Complemental strand, 21542148 - 21542033
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    |||| |||| ||||| |||||||| |  ||||||||| || | ||||||||   ||||||||||||||||||||| ||||||||||||||||| || |||    
T  21542148 gacattccttggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgttatcttt 21542049  T
Q  394 tcaaattattaattgt 409  Q
    | ||||||||| ||||    
T  21542048 ttaaattattagttgt 21542033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 21576697 - 21576796
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    |||||||||||||||||||||||| || |||| |||| || | ||||||||         || |||||||||| ||||||||||||||||||||||||||    
T  21576697 gacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccga---------catcgacacttgtaattacactgaattatgtgattttttc 21576787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 405
Target Start/End: Original strand, 23015936 - 23016041
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    |||||||||||||||||||||||| ||||||||||||  | | |||||||||    || ||| |||||| | | ||||||||||||||||||||||| ||    
T  23015936 gacactcctcggattaggcgtgtcccaatgtcggacacatgtcgtgtccgat----acaacatcgacacctataattacactgaattatgtgattttctc 23016031  T
Q  396 aaattattaa 405  Q
    |||| |||||    
T  23016032 aaatgattaa 23016041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 21522868 - 21522758
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    ||||||| | |||||||||||||| |  || |||||| || | ||||||||   |||||||||||||||| |||| ||||||||||||||||| ||||||    
T  21522868 gacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttt 21522769  T
Q  394 tcaaattatta 404  Q
    | |||||||||    
T  21522768 taaaattatta 21522758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 21533434 - 21533324
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    ||||||| | |||||||||||||| |  || |||||| || | ||||||||   |||||||||||||||| |||| ||||||||||||||||| ||||||    
T  21533434 gacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttt 21533335  T
Q  394 tcaaattatta 404  Q
    | |||||||||    
T  21533334 taaaattatta 21533324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 346 - 417
Target Start/End: Complemental strand, 40131687 - 40131616
Alignment:
Q  346 atcgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgt 417  Q
    ||||| |||||||||| | || | |||| |||||||||||||||||||||||||||||| ||||||||||||    
T  40131687 atcgatacgacaccgatatttataattaaactgaattatgtgattttttcaaattattagttgtatcagtgt 40131616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 404
Target Start/End: Complemental strand, 19579818 - 19579709
Alignment:
Q  297 acactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatc--gacacgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    ||||||||||||||||||||||| |  |||  ||||| | | ||||||||    |||||||||||||||||||| ||| |||| |||||||||||||| |    
T  19579818 acactcctcggattaggcgtgtcccggtgttagacatatgtcgtgtccgacactgacacgacaccgacacttgtaattgcactaaattatgtgattttct 19579719  T
Q  395 caaattatta 404  Q
    ||||||||||    
T  19579718 caaattatta 19579709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 15382592 - 15382485
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtga--ttttt 393  Q
    |||||||||||||||||||||||| |  |||||||||||| | |||||| |   || |||||||||||||||| |||| |||||||||| |||  |||||    
T  15382592 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaac--ac-cgacaccgacacttgtaattatactgaattatatgattttttt 15382496  T
Q  394 tcaaattatta 404  Q
    |||||||||||    
T  15382495 tcaaattatta 15382485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 353 - 409
Target Start/End: Complemental strand, 33178084 - 33178028
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    |||||||||||||||| |||||||| |||||||||||||||| ||||||||| ||||    
T  33178084 cgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgt 33178028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 3966621 - 3966511
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatc--gacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    ||||||||||||||||| |||||| |  ||| |||||  | ||||||||||    |||||||||||||||| | | ||||||||||||| |||||||||     
T  3966621 gacactcctcggattagacgtgtccctctgttggacacatgttgtgtccgacactgacacgacaccgacacatataattacactgaattgtgtgattttc 3966522  T
Q  394 tcaaattatta 404  Q
    |||||||||||    
T  3966521 tcaaattatta 3966511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 8420086 - 8420035
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||| |||||| |||||||||| |||||||||||||||||    
T  8420086 cgacaccgacacttgtaattacattgaattatgttattttttcaaattatta 8420035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 427
Target Start/End: Original strand, 15405062 - 15405129
Alignment:
Q  360 gacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgtccgtgtccgt 427  Q
    ||||||||| |||||| |||||||| ||||||||||||||||||| |||| |||||||  ||||||||    
T  15405062 gacacttgtaattacattgaattatatgattttttcaaattattagttgtgtcagtgttagtgtccgt 15405129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 357 - 404
Target Start/End: Original strand, 24906305 - 24906352
Alignment:
Q  357 accgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  24906305 accgacacttgtaattacactgaattatgtcattttttcaaattatta 24906352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 403
Target Start/End: Original strand, 37328839 - 37328894
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatt 403  Q
    ||||||||||||||||| ||| ||||||||||||| |||||||||| |||||||||    
T  37328839 cgacacgacaccgacacatgtaattacactgaattttgtgatttttacaaattatt 37328894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 424
Target Start/End: Original strand, 6471886 - 6471960
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgtccgtgtc 424  Q
    |||||||||| |||| | | ||||||||||||||||||||||| |||||||||||   || ||||||||||||||    
T  6471886 acacgacacccacacatataattacactgaattatgtgattttctcaaattattagccgtgtcagtgtccgtgtc 6471960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 358 - 404
Target Start/End: Complemental strand, 14674323 - 14674277
Alignment:
Q  358 ccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||    
T  14674323 ccgacacttgtaattacactaaattatgtgattttttcaaattatta 14674277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 10298629 - 10298572
Alignment:
Q  352 acgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    ||||||||||||||||| |||||| || ||||||||| ||||||||||||||| ||||    
T  10298629 acgacaccgacacttgtaattacattgtattatgtgactttttcaaattattagttgt 10298572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 353 - 394
Target Start/End: Complemental strand, 15884047 - 15884006
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  15884047 cgacaccgacacttgtaattacactgaattatgtgatttttt 15884006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 404
Target Start/End: Complemental strand, 41633795 - 41633743
Alignment:
Q  352 acgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||| |||| ||||||||||||||||| | |||||||||||||||    
T  41633795 acgacaccgacatttgtaattacactgaattatgtaaatttttcaaattatta 41633743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 404
Target Start/End: Complemental strand, 43001856 - 43001808
Alignment:
Q  356 caccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  43001856 caccaacacttgtaattacactgaattatgtaattttttcaaattatta 43001808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 2548446 - 2548395
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||| ||||||||||||||||||| ||||| || ||||||||    
T  2548446 cgacaccgacacttatgattacactgaattatgtaattttctctaattatta 2548395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 427
Target Start/End: Original strand, 5894828 - 5894906
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgtccgtgtccgt 427  Q
    |||||||||||||||||||||  ||| | | |||||| ||||||||||||||||||| |||| || |||| |||||||||    
T  5894828 cgacacgacaccgacacttgtagttagattaaattatatgattttttcaaattattagttgtgtccgtgt-cgtgtccgt 5894906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 357 - 404
Target Start/End: Original strand, 7218271 - 7218318
Alignment:
Q  357 accgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||| |||||||||||||||||||||| || |||||||||    
T  7218271 accgacacttgtaattacactgaattatgtgatttatttaaattatta 7218318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 412
Target Start/End: Original strand, 19028999 - 19029060
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtga---ttttttcaaattattaattgtatc 412  Q
    ||||| ||||||||||||||||||| |||||||||   ||||||||||||||||| ||||||    
T  19028999 gacacagacacttgtgattacactggattatgtgatttttttttcaaattattaactgtatc 19029060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 28588674 - 28588725
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||| | | ||||||||||||||||||||||| |||||||||||    
T  28588674 cgacaccgacacctataattacactgaattatgtgattttctcaaattatta 28588725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 409
Target Start/End: Complemental strand, 31264491 - 31264441
Alignment:
Q  359 cgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||||| ||||    
T  31264491 cgacacttatgattacactgaattatgtcattttctcaaattattacttgt 31264441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 296 - 402
Target Start/End: Complemental strand, 14873629 - 14873527
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    |||||||||||||||||||||||| |  ||| ||||| || ||| |||    ||||| ||||||||||| | | |||||||| ||||||||| |||| ||    
T  14873629 gacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgtc----cgacatgacaccgacacatataattacactaaattatgtgcttttctc 14873534  T
Q  396 aaattat 402  Q
    |||||||    
T  14873533 aaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 355 - 404
Target Start/End: Original strand, 17177025 - 17177074
Alignment:
Q  355 acaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||| |||||| |||||| | |||||||||||||||||||    
T  17177025 acaccgacacttgtaattacaatgaattttttgattttttcaaattatta 17177074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 349 - 409
Target Start/End: Complemental strand, 30135377 - 30135316
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgatt-ttttcaaattattaattgt 409  Q
    |||| ||||||||||||||| |||||| ||| |||||||||| |||||||||||||| ||||    
T  30135377 gacatgacaccgacacttgtaattacaatgagttatgtgatttttttcaaattattagttgt 30135316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 32630678 - 32630723
Alignment:
Q  287 tgaatcatagacactcctcggattaggcgtgtctcaatgtcggaca 332  Q
    |||| ||||||||||||||| |||||| ||||||||||||||||||    
T  32630678 tgaagcatagacactcctcgaattaggtgtgtctcaatgtcggaca 32630723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 43564940 - 43564891
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattat 402  Q
    |||||||||||||| | |||||||| ||||||||||||||| ||||||||    
T  43564940 cgacaccgacacttataattacactaaattatgtgatttttccaaattat 43564891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 404
Target Start/End: Complemental strand, 4344786 - 4344750
Alignment:
Q  368 tgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||||| |||||||||||||||||    
T  4344786 tgattacactgaattatgtcattttttcaaattatta 4344750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 394
Target Start/End: Complemental strand, 12199992 - 12199948
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||    
T  12199992 acacgacaccgacacttgtaattgtactgaattatgtgatttttt 12199948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 405
Target Start/End: Original strand, 16374338 - 16374394
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    |||||||||||||||| ||| |||||||||| |||||| |||||||  |||||||||    
T  16374338 gacacgacaccgacacatgtaattacactgatttatgttatttttttcaattattaa 16374394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 24273047 - 24273095
Alignment:
Q  370 attacactgaattatgtgattttttcaaattattaattgtatcagtgtc 418  Q
    ||||||||||||||||||||||| |||||||| ||| ||| ||||||||    
T  24273047 attacactgaattatgtgattttctcaaattaataactgtgtcagtgtc 24273095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 24389167 - 24389119
Alignment:
Q  370 attacactgaattatgtgattttttcaaattattaattgtatcagtgtc 418  Q
    ||||||||||||||||||||||| |||||||| ||| ||| ||||||||    
T  24389167 attacactgaattatgtgattttctcaaattaataactgtgtcagtgtc 24389119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 405
Target Start/End: Original strand, 40000555 - 40000587
Alignment:
Q  373 acactgaattatgtgattttttcaaattattaa 405  Q
    |||||||||||||||||||||||||||||||||    
T  40000555 acactgaattatgtgattttttcaaattattaa 40000587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 10010611 - 10010568
Alignment:
Q  355 acaccgacacttgtgattacactgaattatgtgattttttcaaa 398  Q
    |||||||||| |||||||||| |||||||||| |||||||||||    
T  10010611 acaccgacacatgtgattacaatgaattatgtcattttttcaaa 10010568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 30502388 - 30502439
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||| | | |||||||||||||| |||||||| |||||||||||    
T  30502388 cgacaccgacacatataattacactgaattaagtgattttctcaaattatta 30502439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 30542731 - 30542782
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||| | | |||||||||||||| |||||||| |||||||||||    
T  30542731 cgacaccgacacatataattacactgaattaagtgattttctcaaattatta 30542782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 417
Target Start/End: Original strand, 33035818 - 33035865
Alignment:
Q  370 attacactgaattatgtgattttttcaaattattaattgtatcagtgt 417  Q
    ||||||||||||||| |||||| |||||||||||||| ||||| ||||    
T  33035818 attacactgaattatatgatttattcaaattattaatggtatcggtgt 33035865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 404
Target Start/End: Original strand, 41091253 - 41091308
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||| |||||| | | ||||||||||||||||||||||| |||||| ||||    
T  41091253 gacacgacatcgacacatataattacactgaattatgtgattttctcaaatcatta 41091308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 404
Target Start/End: Complemental strand, 4105310 - 4105265
Alignment:
Q  361 acacttgtgattacactgaattatgtga--ttttttcaaattatta 404  Q
    |||||||| |||||||||||||||||||  ||||||||||||||||    
T  4105310 acacttgtaattacactgaattatgtgatcttttttcaaattatta 4105265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 404
Target Start/End: Original strand, 5467995 - 5468029
Alignment:
Q  370 attacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||||||||| |||||||||||    
T  5467995 attacactgaattatgtgattttatcaaattatta 5468029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 17088349 - 17088279
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgatt-ttttcaaattattaattgtatcagtgt 417  Q
    ||||||||||  ||||||||| || ||||| |||||||||||| ||||||||||||||  ||| |||||||    
T  17088349 cgacacgacagtgacacttgtaatcacactaaattatgtgatttttttcaaattattagatgtgtcagtgt 17088279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 405
Target Start/End: Original strand, 19552540 - 19552595
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    |||||||||| |||||||| |   |||||| |||||||||||||||||||||||||||    
T  19552540 cgacacgacatcgacacttata--tacacttaattatgtgattttttcaaattattaa 19552595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 398
Target Start/End: Original strand, 21319940 - 21319990
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaa 398  Q
    ||||| |||| ||||||||||||||||| |||||||| | |||||||||||    
T  21319940 cgacatgacatcgacacttgtgattacattgaattatatcattttttcaaa 21319990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 404
Target Start/End: Complemental strand, 36838605 - 36838551
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||| | | |||||||| |||||||| ||||| |||||||||||    
T  36838605 acacgacaccgacacatataattacactaaattatgtaattttctcaaattatta 36838551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 401
Target Start/End: Original strand, 6326304 - 6326345
Alignment:
Q  360 gacacttgtgattacactgaattatgtgattttttcaaatta 401  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||    
T  6326304 gacacttgtaattacactgaattatgtaattttctcaaatta 6326345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 6770583 - 6770538
Alignment:
Q  372 tacactgaattatgtgattttttcaaattattaattgtatcagtgt 417  Q
    ||||||||||||||||||||| | ||||||||| |||| |||||||    
T  6770583 tacactgaattatgtgattttcttaaattattagttgtgtcagtgt 6770538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 401
Target Start/End: Original strand, 21194220 - 21194253
Alignment:
Q  368 tgattacactgaattatgtgattttttcaaatta 401  Q
    ||||||||||||||||||||||||| ||||||||    
T  21194220 tgattacactgaattatgtgattttctcaaatta 21194253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 404
Target Start/End: Complemental strand, 23221040 - 23220991
Alignment:
Q  355 acaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||| | |||| ||||| |||||||||||||| |||||||||||    
T  23221040 acaccgacacatatgataacactaaattatgtgattttatcaaattatta 23220991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 443
Target Start/End: Original strand, 32426939 - 32426968
Alignment:
Q  414 gtgtccgtgtccgtatccatgcttcatagg 443  Q
    ||||||||||||||||||||||||||||||    
T  32426939 gtgtccgtgtccgtatccatgcttcatagg 32426968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 406
Target Start/End: Complemental strand, 32444829 - 32444772
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaat 406  Q
    |||||||||||||||| | |||||||| |||||||||| || || ||||||| |||||    
T  32444829 gacacgacaccgacacatttgattacattgaattatgtcatcttctcaaattgttaat 32444772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 296 - 344
Target Start/End: Complemental strand, 17123154 - 17123107
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtcc 344  Q
    |||||||||||||||||||||||| |  |||||||||||||| ||||||    
T  17123154 gacactcctcggattaggcgtgtc-ccgtgtcggacatgtttcgtgtcc 17123107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 354 - 394
Target Start/End: Original strand, 19167577 - 19167617
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    |||||||||||||||||||||| |||||| ||| |||||||    
T  19167577 gacaccgacacttgtgattacattgaattgtgtcatttttt 19167617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 402
Target Start/End: Complemental strand, 19438385 - 19438353
Alignment:
Q  370 attacactgaattatgtgattttttcaaattat 402  Q
    ||||||||||||||||||||||| |||||||||    
T  19438385 attacactgaattatgtgattttctcaaattat 19438353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 22423807 - 22423863
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||  | | |||| | |||||||||||||||| |||||||||||    
T  22423807 cgacacgacaccgacatatataattatattgaattatgtgattttctcaaattatta 22423863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 398
Target Start/End: Original strand, 30080498 - 30080546
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgattttttcaaa 398  Q
    |||| ||||||| ||||||||||||| |||||||||| ||||| |||||    
T  30080498 acaccacaccgatacttgtgattacattgaattatgtcattttctcaaa 30080546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 38749558 - 38749614
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||| ||||| |||| | | |||||| |||||||||| |||||||||||||||||    
T  38749558 cgacacaacaccaacacatataattacattgaattatgtcattttttcaaattatta 38749614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 296 - 332
Target Start/End: Original strand, 39268550 - 39268586
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggaca 332  Q
    |||||||||||||||||||||||| || |||||||||    
T  39268550 gacactcctcggattaggcgtgtcccagtgtcggaca 39268586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 3e-30; HSPs: 91)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 47989615 - 47989505
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    |||||||||||||||||||||||| | ||||| ||||||| | ||||||||   ||||||||||||||||||||| ||||||||||||||||||||||||    
T  47989615 gacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttt 47989516  T
Q  394 tcaaattatta 404  Q
    | |||||||||    
T  47989515 ttaaattatta 47989505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 297 - 404
Target Start/End: Complemental strand, 5944400 - 5944289
Alignment:
Q  297 acactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccg--atcgacacgacaccgacacttgtgattacactgaattatgtgatt--tt 392  Q
    |||||||||||||||||||| || |  |||||||||||| |||||||||  ||||||||||||||||||||| | |||||||||||||||||||||  ||    
T  5944400 acactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacacgacaccgacacttataattacactgaattatgtgatttttt 5944301  T
Q  393 ttcaaattatta 404  Q
    ||||||||||||    
T  5944300 ttcaaattatta 5944289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 1486655 - 1486760
Alignment:
Q  295 agacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    ||||||||||||||||||||||||| |  ||||||||| || | ||||||||    |||||||||||||||| | |||||||||||||||||||||||||    
T  1486655 agacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccga----cacgacaccgacacttataattacactgaattatgtgatttttt 1486750  T
Q  395 caaattatta 404  Q
    ||||||||||    
T  1486751 caaattatta 1486760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 296 - 412
Target Start/End: Original strand, 6612112 - 6612230
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccga--tcgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    ||||||||| ||||||||||||||    |||||||||  | | ||||||||  |||||||||||||||||||||| ||||||||||||||||| ||||||    
T  6612112 gacactccttggattaggcgtgtcctggtgtcggacacatatcgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaattttt 6612211  T
Q  394 tcaaattattaattgtatc 412  Q
    |||||||||||| ||||||    
T  6612212 tcaaattattaactgtatc 6612230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 354 - 422
Target Start/End: Original strand, 40258934 - 40259002
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgtccgtg 422  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  40258934 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattaattgtgtcggtgtccgtg 40259002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 349 - 424
Target Start/End: Original strand, 24577182 - 24577259
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatca--gtgtccgtgtc 424  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||  |||||||||||    
T  24577182 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtgtccgtgtc 24577259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 349 - 442
Target Start/End: Original strand, 1704988 - 1705083
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatc--agtgtccgtgtccgtatccatgcttcatag 442  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||  ||| ||   ||||| |||||||||||| ||||||||||    
T  1704988 gacacgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgtcggtgtgtcggtgtccgtatccgtgcttcatag 1705083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 1815315 - 1815222
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatc--agtgtccgtgtccgtatccatgcttcataggtt 445  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||| |||| |||| ||   ||||| |||||||||||| |||||||||||||    
T  1815315 gacaccgacacttgtaattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatccgtgcttcataggtt 1815222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 348 - 404
Target Start/End: Complemental strand, 113363 - 113307
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  113363 cgacacgacacctacacttgtaattacactgaattatgtgattttttcaaattatta 113307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 22515839 - 22515938
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    ||||||||||||||||||||||||||  ||||||| |||| | ||||||||         ||||||||||||| |||||||| |||||||||||||||||    
T  22515839 gacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccga---------caccgacacttgtaattacactaaattatgtgattttttc 22515929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 296 - 403
Target Start/End: Complemental strand, 18337436 - 18337338
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    |||||||||||||| |||| |||| || ||||||||| || ||||||||||         ||||||||||||| ||||||||||||||||||||||||||    
T  18337436 gacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccga---------caccgacacttgtaattacactgaattatgtgattttttc 18337346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 31694651 - 31694763
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtga--ttt 391  Q
    |||||||||| ||||||||||||  |  ||||| | |||| ||||||||||   ||||||||||||||||||||| |||| ||||||||||||||  |||    
T  31694651 gacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttt 31694750  T
Q  392 tttcaaattatta 404  Q
    |||||||||||||    
T  31694751 tttcaaattatta 31694763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 409
Target Start/End: Original strand, 22881616 - 22881672
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||    
T  22881616 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgt 22881672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 324 - 404
Target Start/End: Original strand, 9629869 - 9629951
Alignment:
Q  324 tgtcggacatgttttgtgtccga--tcgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||| | ||||||||  |||||||||||||||||||| | || |||||||||||| ||||||| |||||||||||    
T  9629869 tgtcggacatgtgtcgtgtccgacatcgacacgacaccgacacttataatcacactgaattatatgattttatcaaattatta 9629951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 38078661 - 38078712
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  38078661 cgacaccgacacttgtaattacattgaattatgtgattttttcaaattatta 38078712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 42359449 - 42359500
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  42359449 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattatta 42359500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 354 - 424
Target Start/End: Original strand, 18190109 - 18190179
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgtccgtgtc 424  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||||||||  ||| ||||| ||||||||    
T  18190109 gacatcgacacttgtaattacactgaattatgtaattttttcaaattattaggtgtgtcagtatccgtgtc 18190179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 409
Target Start/End: Complemental strand, 37598938 - 37598835
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    |||||||||||||||||||||||| || ||||||||| || | ||||||||         ||||||||||| | ||||||||||||| ||||||||||||    
T  37598938 gacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccga---------caccgacacttataattacactgaatt-tgtgattttttc 37598849  T
Q  396 aaattattaattgt 409  Q
    ||||||||| ||||    
T  37598848 aaattattagttgt 37598835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 354 - 414
Target Start/End: Original strand, 28273089 - 28273149
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcag 414  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||| |||| |||| ||||    
T  28273089 gacaccgacacttgtaattacactgaattatatgattttttcaaatgattagttgtgtcag 28273149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 296 - 409
Target Start/End: Original strand, 32461405 - 32461519
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    |||||| || |||||||||||||| || |||| |||| || | ||||||||   |||||| ||||| |||||||| |||||| | |||||||||||||||    
T  32461405 gacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacac-acaccaacacttgtaattacattaaattatgtgattttt 32461503  T
Q  394 tcaaattattaattgt 409  Q
    ||||||||||| ||||    
T  32461504 tcaaattattagttgt 32461519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 40917867 - 40917759
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    |||| ||||||||||||||||||| |  ||||||||| || | |||||| |   |||||||||||||| |||||| |||||||| |||  ||||||||||    
T  40917867 gacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgacaccgagacttgtaattacacttaat--tgtgattttt 40917770  T
Q  394 tcaaattatta 404  Q
    |||||||||||    
T  40917769 tcaaattatta 40917759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 51410084 - 51410032
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgatt-ttttcaaattatta 404  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  51410084 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatta 51410032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 409
Target Start/End: Complemental strand, 6332732 - 6332674
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    |||||||||||| |||||| |||||||||||||||||||| |||||||||||||| ||||    
T  6332732 acacgacaccgatacttgtaattacactgaattatgtgat-ttttcaaattattagttgt 6332674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 9828162 - 9828052
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatc--gacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    ||||||||||||||||| |||||| |  ||||||||| || | ||||| ||    |||||||||||||||| |   |||||||||||||||||||||||     
T  9828162 gacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaattatgtgatttta 9828063  T
Q  394 tcaaattatta 404  Q
    |||||||||||    
T  9828062 tcaaattatta 9828052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 404
Target Start/End: Original strand, 20157346 - 20157401
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||| | ||||||||||||||||||||||||| ||| |||||||    
T  20157346 gacacgacaccgacacatatgattacactgaattatgtgattttctcacattatta 20157401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 31672895 - 31672946
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||| |||||| |||||||||||||| ||||||||||||||||||||    
T  31672895 cgacaccgagacttgtaattacactgaattaagtgattttttcaaattatta 31672946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 46348383 - 46348434
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||| |||||||| |||||| |||||||||||||||||||    
T  46348383 cgacaccgacacttgtaattacactaaattatatgattttttcaaattatta 46348434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 404
Target Start/End: Original strand, 5376493 - 5376551
Alignment:
Q  346 atcgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||||||| | ||||||||||||||||| ||||| | |||||||||    
T  5376493 atcgacacgacaccgacacttttaattacactgaattatgttattttcttaaattatta 5376551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 404
Target Start/End: Complemental strand, 17778610 - 17778557
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||||||| |||||||||   |||||||||||||||||||||||    
T  17778610 cgacacgacaccgacacttgtaattacactg---tatgtgattttttcaaattatta 17778557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 358 - 404
Target Start/End: Complemental strand, 31015097 - 31015051
Alignment:
Q  358 ccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||    
T  31015097 ccgacacttgtaattacactgaattatgtgattttctcaaattatta 31015051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 402
Target Start/End: Complemental strand, 44482294 - 44482240
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattat 402  Q
    ||||||||||||||||| | | ||||||||||||||||||||||| |||||||||    
T  44482294 cgacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 355 - 404
Target Start/End: Complemental strand, 21378635 - 21378586
Alignment:
Q  355 acaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttttcaatttatta 21378586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 394
Target Start/End: Original strand, 30173711 - 30173803
Alignment:
Q  304 tcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatc--gacacgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    |||| |||||||||||  |  ||||||||||| | |||||||||   |||||||||||||||||||| |||||||||| |||||| |||||||    
T  30173711 tcgggttaggcgtgtcctagagtcggacatgtgtcgtgtccgatacggacacgacaccgacacttgtaattacactgagttatgtaatttttt 30173803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 405
Target Start/End: Complemental strand, 9103698 - 9103647
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    |||||||||||||||| |||| ||| |||||||||||||||||||||||||||    
T  9103698 cgacaccgacacttgt-attaaactaaattatgtgattttttcaaattattaa 9103647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 38503436 - 38503328
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    ||||| |||||||||||| ||||| |   ||| ||||||| |  ||||||| ||||| ||||||||||| | | ||||||||||| ||| ||||||| ||    
T  38503436 gacacacctcggattaggtgtgtccctgcgtcagacatgtgtcatgtccgaccgacaggacaccgacacatataattacactgaaatatatgattttctc 38503337  T
Q  396 aaattatta 404  Q
    |||||||||    
T  38503336 aaattatta 38503328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 404
Target Start/End: Original strand, 7918207 - 7918262
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||| ||||| | | ||||||||||||||||||||||| |||||||||||    
T  7918207 gacacgacactgacacatataattacactgaattatgtgattttctcaaattatta 7918262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 19058856 - 19058907
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||| ||||||||||||||||| || |||| |||||||||    
T  19058856 cgacaccgacacttgtaattacactgaattatgttatctttttaaattatta 19058907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 405
Target Start/End: Complemental strand, 25272544 - 25272489
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    ||||||||||||||||| | |||||||| |||||||||||||| ||||||| ||||    
T  25272544 acacgacaccgacacttataattacactaaattatgtgattttctcaaattgttaa 25272489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 41877470 - 41877521
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||| |||||||| |||||||| ||||| |||||||||||    
T  41877470 cgacaccgacacttgtaattacactaaattatgtaattttctcaaattatta 41877521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 404
Target Start/End: Original strand, 398782 - 398816
Alignment:
Q  370 attacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||||||||||||||||||||||    
T  398782 attacactgaattatgtgattttttcaaattatta 398816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 405
Target Start/End: Original strand, 1864882 - 1864932
Alignment:
Q  355 acaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    |||||||||| | | ||||||||||||||||||||||| ||||||||||||    
T  1864882 acaccgacacatataattacactgaattatgtgattttctcaaattattaa 1864932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 412
Target Start/End: Complemental strand, 15323205 - 15323163
Alignment:
Q  370 attacactgaattatgtgattttttcaaattattaattgtatc 412  Q
    |||||||| ||||||||||||||||||||||||||| ||||||    
T  15323205 attacactaaattatgtgattttttcaaattattaactgtatc 15323163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 402
Target Start/End: Complemental strand, 25361950 - 25361896
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattat 402  Q
    ||||||||||| ||||| | | ||||||||||||||||||||||| |||||||||    
T  25361950 cgacacgacactgacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 409
Target Start/End: Original strand, 32434718 - 32434772
Alignment:
Q  355 acaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    |||| ||||||||| |||||| |||||||||||| ||||||||||||||| ||||    
T  32434718 acacagacacttgtaattacaatgaattatgtgactttttcaaattattagttgt 32434772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 394
Target Start/End: Original strand, 35919271 - 35919317
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||    
T  35919271 cgacacgacacggacacttataattacactgaattatgtgatttttt 35919317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 404
Target Start/End: Complemental strand, 36878519 - 36878469
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||| | | ||||||||||||||||||||||| |||||||||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaattatta 36878469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 404
Target Start/End: Original strand, 48450592 - 48450638
Alignment:
Q  358 ccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||| |||||||| |||||||| |||||||||||||||||    
T  48450592 ccgacacttgtaattacactaaattatgttattttttcaaattatta 48450638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 296 - 394
Target Start/End: Complemental strand, 6427582 - 6427482
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    ||||||| || ||||||||||||| |  ||||||||| || | ||||||||   | ||||||||| |||||||||  ||||| |||||||||||||||||    
T  6427582 gacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacgcctacacgacactgacacttgtagttacattgaattatgtgattttt 6427483  T
Q  394 t 394  Q
    |    
T  6427482 t 6427482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 353 - 441
Target Start/End: Complemental strand, 40181930 - 40181848
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgtccgtgtccgtatccatgcttcata 441  Q
    ||||||||| || | | ||||||||||||||||||||||| |||||||||      || ||||||| |||||||||||| |||||||||    
T  40181930 cgacaccgatacatataattacactgaattatgtgattttctcaaattat------tagcagtgtctgtgtccgtatccgtgcttcata 40181848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 406
Target Start/End: Original strand, 9449025 - 9449061
Alignment:
Q  370 attacactgaattatgtgattttttcaaattattaat 406  Q
    |||| ||||||||||||||||||||||||||||||||    
T  9449025 attatactgaattatgtgattttttcaaattattaat 9449061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 398
Target Start/End: Original strand, 24462267 - 24462315
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgattttttcaaa 398  Q
    ||||||||| || ||||||||||||| |||||||||| |||||||||||    
T  24462267 acacgacactgaaacttgtgattacattgaattatgtcattttttcaaa 24462315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 394
Target Start/End: Complemental strand, 28663674 - 28663626
Alignment:
Q  346 atcgacacgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    ||||| ||||||||||||||||| ||||||  |||||||||||||||||    
T  28663674 atcgatacgacaccgacacttgtaattacatagaattatgtgatttttt 28663626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 40285649 - 40285705
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||| |||||| | ||| |||||||||||||| |||||| |||||||||||    
T  40285649 cgacacgacatcgacacatatgactacactgaattatgcgattttctcaaattatta 40285705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 411
Target Start/End: Complemental strand, 2283726 - 2283667
Alignment:
Q  352 acgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtat 411  Q
    |||||||| |||||| | |||||| ||||| |||||||||||||||||||| | ||||||    
T  2283726 acgacaccaacacttataattacattgaatcatgtgattttttcaaattataagttgtat 2283667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 5927340 - 5927391
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||| ||||||||| |||||| | |||||| |||||||||||||||||||    
T  5927340 cgacactgacacttgtaattacattaaattatatgattttttcaaattatta 5927391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 404
Target Start/End: Complemental strand, 6427413 - 6427358
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||| |||| | | |||||| |||||||||||||||| |||||||||||    
T  6427413 gacacgacaccaacacatataattacattgaattatgtgattttctcaaattatta 6427358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 12612028 - 12611977
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgattttttcaaatta 401  Q
    |||||| || ||||| | |||||||||| |||||||||||||||||||||||    
T  12612028 acacgatactgacacatatgattacactcaattatgtgattttttcaaatta 12611977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 18556397 - 18556507
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    |||||| ||||||||||||||||| || ||||||| | || | | ||| ||   || ||||||||| | |||||| |||||| | ||||||||||| |||    
T  18556397 gacacttctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacaccgtcacgacaccaatacttgtaattacattaaattatgtgatattt 18556496  T
Q  394 tcaaattatta 404  Q
    |||||||||||    
T  18556497 tcaaattatta 18556507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 397
Target Start/End: Complemental strand, 34371775 - 34371728
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgattttttcaa 397  Q
    ||||||||||||||| | | ||||||||||||||||||||||| ||||    
T  34371775 acacgacaccgacacatataattacactgaattatgtgattttctcaa 34371728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 38075970 - 38076021
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||| | |||||||||||| |||||||||||  |||||||||||    
T  38075970 cgacaccgacacatatgattacactgacttatgtgatttactcaaattatta 38076021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 387
Target Start/End: Complemental strand, 2218302 - 2218264
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtg 387  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  2218302 gacacgacaccgacacttgtaattacactaaattatgtg 2218264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 404
Target Start/End: Original strand, 5898283 - 5898317
Alignment:
Q  370 attacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||||||||||||| |||||||    
T  5898283 attacactgaattatgtgattttttcagattatta 5898317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 404
Target Start/End: Original strand, 10572586 - 10572640
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||| |||||||||| | | ||||||| ||||||||||||||| |||||||||||    
T  10572586 acacaacaccgacacatttaattacaccgaattatgtgattttctcaaattatta 10572640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 404
Target Start/End: Original strand, 12443477 - 12443511
Alignment:
Q  370 attacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||||||||| |||||||||||    
T  12443477 attacactgaattatgtgattttctcaaattatta 12443511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 405
Target Start/End: Complemental strand, 13997940 - 13997890
Alignment:
Q  355 acaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    |||||||||| | | ||||||||||||||||||||||||| |||| |||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttttttaaataattaa 13997890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 404
Target Start/End: Original strand, 16927202 - 16927236
Alignment:
Q  370 attacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||| |||||||||||||||||||    
T  16927202 attacactgaattatatgattttttcaaattatta 16927236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 404
Target Start/End: Complemental strand, 18471355 - 18471306
Alignment:
Q  357 accgacacttgtgattacactgaattatgtgatt--ttttcaaattatta 404  Q
    |||||||||||| |||| ||||||||||||||||  ||||||||||||||    
T  18471355 accgacacttgtaattatactgaattatgtgattttttttcaaattatta 18471306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 404
Target Start/End: Complemental strand, 23738716 - 23738686
Alignment:
Q  374 cactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||||||||||||||||||    
T  23738716 cactgaattatgtgattttttcaaattatta 23738686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 414 - 444
Target Start/End: Original strand, 24334782 - 24334812
Alignment:
Q  414 gtgtccgtgtccgtatccatgcttcataggt 444  Q
    |||||||||||||||||||||||||||||||    
T  24334782 gtgtccgtgtccgtatccatgcttcataggt 24334812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 404
Target Start/End: Original strand, 27471567 - 27471617
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||| |||| ||| |||||||||||||||||| |||| |||||||||||    
T  27471567 gacaccaacacatgtaattacactgaattatgtgcttttctcaaattatta 27471617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 404
Target Start/End: Complemental strand, 34298478 - 34298444
Alignment:
Q  370 attacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||||||||| |||||||||||    
T  34298478 attacactgaattatgtgattttctcaaattatta 34298444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 404
Target Start/End: Original strand, 42386394 - 42386447
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||| ||| |||||||||||| |||||||||  |||||||||||||||||    
T  42386394 acacgacactgacccttgtgattacattgaattatg-cattttttcaaattatta 42386447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 393
Target Start/End: Original strand, 15449231 - 15449272
Alignment:
Q  352 acgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    ||||||| ||||||||| |||||||| |||||||||||||||    
T  15449231 acgacacagacacttgtaattacactaaattatgtgattttt 15449272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 404
Target Start/End: Complemental strand, 17754352 - 17754319
Alignment:
Q  371 ttacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||| |||||||||||||||||    
T  17754352 ttacactgaattatgtaattttttcaaattatta 17754319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 404
Target Start/End: Original strand, 17831537 - 17831582
Alignment:
Q  359 cgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||| | |||||||||||||| |||||||||| |||||||||||    
T  17831537 cgacacatatgattacactgaataatgtgattttctcaaattatta 17831582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 394
Target Start/End: Complemental strand, 21621014 - 21620973
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    |||||||||| ||||| | |||||||||||||||||||||||    
T  21621014 cgacaccgacgcttgtaaatacactgaattatgtgatttttt 21620973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 404
Target Start/End: Complemental strand, 23653040 - 23653007
Alignment:
Q  371 ttacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||| |||||||||||||||||||||||    
T  23653040 ttacactgaagtatgtgattttttcaaattatta 23653007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 404
Target Start/End: Original strand, 30847722 - 30847771
Alignment:
Q  355 acaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||| ||||| | |||||||| |||||||||| |||||||||||||||||    
T  30847722 acactgacacatatgattacattgaattatgtcattttttcaaattatta 30847771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 372 - 404
Target Start/End: Original strand, 2896140 - 2896172
Alignment:
Q  372 tacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||||||| |||||||||||    
T  2896140 tacactgaattatgtgattttctcaaattatta 2896172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 8010282 - 8010338
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||| ||| |||||||| | |||| |||||||||| | |||||||||||||||||    
T  8010282 cgacacaacatcgacacttataattatactgaattatataattttttcaaattatta 8010338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 404
Target Start/End: Original strand, 13011223 - 13011267
Alignment:
Q  361 acacttgtgattacactgaattatgtga-ttttttcaaattatta 404  Q
    |||||||| |||||||| |||||||||| ||||||||||||||||    
T  13011223 acacttgtaattacacttaattatgtgatttttttcaaattatta 13011267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 14359529 - 14359572
Alignment:
Q  360 gacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||| |||||||| |||||||||| |||||||||||||||    
T  14359529 gacacttgtaattacactaaattatgtga-tttttcaaattatta 14359572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 404
Target Start/End: Complemental strand, 16812587 - 16812551
Alignment:
Q  368 tgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  16812587 tgattccactgaattatgtgattttgtcaaattatta 16812551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 402
Target Start/End: Complemental strand, 19324604 - 19324572
Alignment:
Q  370 attacactgaattatgtgattttttcaaattat 402  Q
    ||||||||||||||||||||||| |||||||||    
T  19324604 attacactgaattatgtgattttctcaaattat 19324572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 19562567 - 19562672
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacac-gacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    |||||||||||||||||| ||||| |  ||||||||| || |||| |||||    ||| |||||| |||| | | ||||||||||| |||| |||||| |    
T  19562567 gacactcctcggattaggtgtgtccctgtgtcggacacgtgttgtatccga----cactgacacctacacatataattacactgaactatgagattttct 19562662  T
Q  395 caaattatta 404  Q
    ||||||||||    
T  19562663 caaattatta 19562672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 404
Target Start/End: Complemental strand, 21038147 - 21038091
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||| ||| | | ||||||||||||||||||| ||||| | |||||||||    
T  21038147 cgacacgacactgacgcatatgattacactgaattatgtaattttcttaaattatta 21038091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 353 - 385
Target Start/End: Original strand, 24334705 - 24334737
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatg 385  Q
    |||||||||||||||| ||||||||||||||||    
T  24334705 cgacaccgacacttgtaattacactgaattatg 24334737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 402
Target Start/End: Original strand, 25098572 - 25098604
Alignment:
Q  370 attacactgaattatgtgattttttcaaattat 402  Q
    ||||||||||||||||||||||| |||||||||    
T  25098572 attacactgaattatgtgattttctcaaattat 25098604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 34712378 - 34712434
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||| ||||| | | |||||||| |||||||| ||||| |||||||||||    
T  34712378 cgacacgacactgacacatataattacactaaattatgttattttctcaaattatta 34712434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 44296490 - 44296545
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||| | |||||| ||| |||||||| ||||| |||||||||||    
T  44296490 cgacacgacaccgacacatatgatta-actaaattatgtcattttctcaaattatta 44296545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 353 - 405
Target Start/End: Complemental strand, 52903308 - 52903256
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    |||||||||||| | | ||||||||||||||| ||||||| | ||||||||||    
T  52903308 cgacaccgacacatataattacactgaattatatgattttattaaattattaa 52903256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 5e-29; HSPs: 85)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 299 - 409
Target Start/End: Original strand, 8365463 - 8365575
Alignment:
Q  299 actcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttttca 396  Q
    ||||||||||||||||||||| || ||||||||| || | |||||||||  ||||||||||||||||||||| ||||||| |||||||||||| ||||||    
T  8365463 actcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaattatgtgatattttca 8365562  T
Q  397 aattattaattgt 409  Q
    |||||||| ||||    
T  8365563 aattattagttgt 8365575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 16766807 - 16766705
Alignment:
Q  304 tcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaatta 401  Q
    |||||||||||||||| |  ||||||||| || ||||||||||   ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16766807 tcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaatta 16766708  T
Q  402 tta 404  Q
    |||    
T  16766707 tta 16766705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 405
Target Start/End: Original strand, 5970040 - 5970160
Alignment:
Q  287 tgaatcatagacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattat 384  Q
    |||| ||||| ||||||||||||| |||||||| | |||||||| |||| | ||||||||   |||||||||||| ||| |||| |||||||||||||||    
T  5970040 tgaagcatagtcactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattat 5970139  T
Q  385 gtgattttttcaaattattaa 405  Q
    |||||||||||||||||||||    
T  5970140 gtgattttttcaaattattaa 5970160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 405
Target Start/End: Complemental strand, 8714099 - 8713986
Alignment:
Q  295 agacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgatt-t 391  Q
    |||||||||||||||| |||||||| | |||||||| |||| | ||||||||   |||||||||||| ||| |||| ||||||||||||||||||||| |    
T  8714099 agacactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgatttt 8714000  T
Q  392 tttcaaattattaa 405  Q
    ||||||||||||||    
T  8713999 tttcaaattattaa 8713986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 296 - 413
Target Start/End: Complemental strand, 31385037 - 31384919
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat-cgacacgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    ||||||||| |||||||||||||| |  ||| ||||| || | |||||| |  | ||||||||| ||||||||| |||||||||||||||||||||||||    
T  31385037 gacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaacactacacgacactgacacttgtaattacactgaattatgtgatttttt 31384938  T
Q  395 caaattattaattgtatca 413  Q
    |||||||||| ||||||||    
T  31384937 caaattattagttgtatca 31384919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 298 - 404
Target Start/End: Original strand, 9107313 - 9107421
Alignment:
Q  298 cactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    |||||||||||||||| ||||| |  |||||||||    ||||||||||   ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  9107313 cactcctcggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattttgtgattttttc 9107412  T
Q  396 aaattatta 404  Q
    |||||||||    
T  9107413 aaattatta 9107421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 349 - 409
Target Start/End: Original strand, 10770670 - 10770730
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  10770670 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgt 10770730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 287 - 403
Target Start/End: Complemental strand, 9629510 - 9629392
Alignment:
Q  287 tgaatcatagacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccga-tcgaca-cgacaccgacacttgtgattacactgaattat 384  Q
    |||| ||| ||||||||||||||||| ||||||||| |||||||||  | ||||||||||  ||||| |||||||||||| | | |||||| ||||||||    
T  9629510 tgaagcatggacactcctcggattagacgtgtctcagtgtcggacacatgttgtgtccgacacgacaccgacaccgacacatataattacattgaattat 9629411  T
Q  385 gtgattttttcaaattatt 403  Q
    |||||||| ||||||||||    
T  9629410 gtgattttctcaaattatt 9629392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 353 - 409
Target Start/End: Complemental strand, 34595193 - 34595137
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  34595193 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgt 34595137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 306 - 404
Target Start/End: Complemental strand, 9522999 - 9522899
Alignment:
Q  306 ggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatt 403  Q
    ||||||||||||||||  ||||||||| || | |  |||||   |||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  9522999 ggattaggcgtgtctcggtgtcggacacgtgtcggatccgacaccgacacaacaccgacacttgtaattacactgaattatgtgatttttttaaattatt 9522900  T
Q  404 a 404  Q
    |    
T  9522899 a 9522899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 409
Target Start/End: Original strand, 7801156 - 7801212
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||    
T  7801156 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgt 7801212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 409
Target Start/End: Complemental strand, 7930368 - 7930308
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    |||||||||||||||||||  ||| |||| |||||||||||||||||||||||||||||||    
T  7930368 gacacgacaccgacacttgaaatttcactaaattatgtgattttttcaaattattaattgt 7930308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 409
Target Start/End: Original strand, 8776920 - 8777029
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    |||||||||||||||||| |||||||  ||||||||| || | |||||   ||    ||||||| |||||||| ||||||||||||| ||||||||||||    
T  8776920 gacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtcgtgtc----cgacaccaacacttgtaattacactgaattttgtgattttttc 8777015  T
Q  396 aaattattaattgt 409  Q
    ||||||||| ||||    
T  8777016 aaattattagttgt 8777029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 404
Target Start/End: Complemental strand, 12696388 - 12696332
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||    
T  12696388 cgacacgacactgacacttgtaattacactgaattatgtaattttttcaaattatta 12696332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 17841541 - 17841640
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    ||||||||||||||||||||||||||| |||||||||  | | ||||||||         ||||| ||||||| |||||||| |||||||||||||||||    
T  17841541 gacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccga---------caccgtcacttgtaattacactaaattatgtgattttttc 17841631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 421
Target Start/End: Complemental strand, 28715354 - 28715286
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgtccgt 421  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||   || |||||||||||    
T  28715354 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagccgtgtcagtgtccgt 28715286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 7977830 - 7977881
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  7977830 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattatta 7977881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 355 - 409
Target Start/End: Complemental strand, 16833365 - 16833311
Alignment:
Q  355 acaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||    
T  16833365 acaccgacacttgtaattacactgaagtatgtgattttttcaaattattagttgt 16833311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 401
Target Start/End: Original strand, 10339066 - 10339174
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccg--atcgacacgacaccgacacttgtgatt-acactgaattatgtgatttt 392  Q
    |||||||||| ||||||||||||| || |||||||||||| | |||||||  | ||||||| ||| ||||| | | ||| ||||||||||||||||||||    
T  10339066 gacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacacggcactgacacatataattaacactgaattatgtgatttt 10339165  T
Q  393 ttcaaatta 401  Q
     ||||||||    
T  10339166 ctcaaatta 10339174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 353 - 405
Target Start/End: Original strand, 426514 - 426566
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    |||||||||||||||| |||||| | |||||||||||||||||||||||||||    
T  426514 cgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaa 426566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 348 - 444
Target Start/End: Original strand, 785450 - 785541
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgtccgtgtccgtatccatgcttcataggt 444  Q
    |||||||||||||||||||||||||||| |||||||||| ||| |||  ||     |||| |||||||||||||||| || ||| ||||||||||||    
T  785450 cgacacgacaccgacacttgtgattacattgaattatgtcattattttgaa-----aattttatcagtgtccgtgtctgtgtccgtgcttcataggt 785541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 353 - 409
Target Start/End: Original strand, 853859 - 853915
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    |||||||||||||||| ||| |||| |||||||||||||||||||||||||| ||||    
T  853859 cgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgt 853915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 349 - 404
Target Start/End: Original strand, 9911524 - 9911580
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattt-tttcaaattatta 404  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||    
T  9911524 gacacgacaccgacacttgtaattacactgaattatgtgatttcttttaaattatta 9911580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 403864 - 403915
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  403864 cgacaccgacacttgtagttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 404
Target Start/End: Original strand, 9025490 - 9025545
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||| | | ||||||||||||||||||||||| |||||||||||    
T  9025490 gacacgacaccgacacatataattacactgaattatgtgattttctcaaattatta 9025545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 347 - 398
Target Start/End: Complemental strand, 19369882 - 19369831
Alignment:
Q  347 tcgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaa 398  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||| |||||    
T  19369882 tcgacacgacaccgacacttgtgattacattgaattatgtcattttctcaaa 19369831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 28152157 - 28152107
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  28152157 cgacaccgacacttgtaattacactgaattatgtgat-ttttcaaattatta 28152107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 359 - 409
Target Start/End: Complemental strand, 1681811 - 1681761
Alignment:
Q  359 cgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    |||||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  1681811 cgacacttgtaattacactgaattacgtgattttttcaaattattagttgt 1681761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 358 - 404
Target Start/End: Complemental strand, 31959213 - 31959167
Alignment:
Q  358 ccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||    
T  31959213 ccgacacttgtaattacactgcattatgtgattttttcaaattatta 31959167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 353 - 394
Target Start/End: Original strand, 26402680 - 26402721
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  26402680 cgacaccgacacttgtgattacactgaattatgtcatttttt 26402721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 34225826 - 34225875
Alignment:
Q  370 attacactgaattatgtgattttttcaaattattaattgtatcagtgtcc 419  Q
    |||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  34225826 attacactgaattatgcgattttttcaaattattagttgtgtcagtgtcc 34225875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 6898281 - 6898332
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||| |||||||| |||||||| |||| ||||||||||||    
T  6898281 cgacaccgacacttgtaattacacttaattatgtaatttgttcaaattatta 6898332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 7265593 - 7265644
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||| | | ||||||||||||||||||||||| |||||||||||    
T  7265593 cgacaccgacacatataattacactgaattatgtgattttctcaaattatta 7265644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 409
Target Start/End: Original strand, 15489733 - 15489788
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    ||||||||||||||| |||||| |||||| ||| ||||||||||||||||| ||||    
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgt 15489788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 404
Target Start/End: Original strand, 21395304 - 21395358
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||||||| |||||||| |||||||| ||||| |||||||||||    
T  21395304 gacacgacaccgacacttgtaattacactaaattatgt-attttctcaaattatta 21395358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 404
Target Start/End: Complemental strand, 7938174 - 7938124
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||| | |||||||| |||||| |||||||||||||||||||    
T  7938174 gacaccgacacttataattacactaaattatatgattttttcaaattatta 7938124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 17302620 - 17302554
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgatt-ttttcaaattattaattgtatcag 414  Q
    |||||||||  ||||||||| |||||| |||||||||||||| |||||||||||||| |||| ||||    
T  17302620 gacacgacaatgacacttgtaattacattgaattatgtgatttttttcaaattattagttgtgtcag 17302554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 359 - 404
Target Start/End: Original strand, 1191706 - 1191751
Alignment:
Q  359 cgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||| ||||||||||||| ||||| |||||||||||||||    
T  1191706 cgacacttgtaattacactgaattttgtgaatttttcaaattatta 1191751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 1700411 - 1700362
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattat 402  Q
    |||||||||||||| | ||||||||||| ||||||||||||| |||||||    
T  1700411 cgacaccgacacttataattacactgaaatatgtgatttttttaaattat 1700362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 4878049 - 4877950
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtga-tttttt 394  Q
    |||||||||||||||||||||||| |  |||||||||||| | ||||||||         ||||||||||||| |||| ||| |||||||||| ||||||    
T  4878049 gacactcctcggattaggcgtgtc-ctgtgtcggacatgtgtcgtgtccga---------caccgacacttgtaattatacttaattatgtgactttttt 4877960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 353 - 398
Target Start/End: Original strand, 6751882 - 6751927
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaa 398  Q
    ||||||||||||||||||||||| |||||||||| ||||| |||||    
T  6751882 cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 6751927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 351 - 404
Target Start/End: Complemental strand, 7151473 - 7151420
Alignment:
Q  351 cacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||| |||| | | |||||||| ||||||||||||||||||||||||||    
T  7151473 cacgacaccaacacatataattacacttaattatgtgattttttcaaattatta 7151420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 359 - 404
Target Start/End: Complemental strand, 10842585 - 10842540
Alignment:
Q  359 cgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||| | |||||||||| ||||||||||||||||||||||||||    
T  10842585 cgacacatatgattacactaaattatgtgattttttcaaattatta 10842540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 403
Target Start/End: Original strand, 16388250 - 16388283
Alignment:
Q  370 attacactgaattatgtgattttttcaaattatt 403  Q
    ||||||||||||||||||||||||||||||||||    
T  16388250 attacactgaattatgtgattttttcaaattatt 16388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 405
Target Start/End: Original strand, 17341671 - 17341716
Alignment:
Q  360 gacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    ||||||| | ||||||||||||||||||||||| ||||||||||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattattaa 17341716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 355 - 404
Target Start/End: Original strand, 26178683 - 26178732
Alignment:
Q  355 acaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||| | |||||||||| |||||||||||||| |||||||||||    
T  26178683 acaccgacacatatgattacactaaattatgtgattttatcaaattatta 26178732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 404
Target Start/End: Complemental strand, 2117139 - 2117084
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||| ||||||| | ||| || ||||||||||||||||||||||||||||    
T  2117139 cgacacgacac-gacacttataattgcattgaattatgtgattttttcaaattatta 2117084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 3209441 - 3209389
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgatt-ttttcaaattatta 404  Q
    |||||||||||||||| || ||||| |||||||||||| ||||||||||||||    
T  3209441 cgacaccgacacttgtaataacactaaattatgtgatttttttcaaattatta 3209389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 4118341 - 4118385
Alignment:
Q  361 acacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    |||||||| |||||| | |||||||||||||||||||||||||||    
T  4118341 acacttgtaattacatttaattatgtgattttttcaaattattaa 4118385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 405
Target Start/End: Original strand, 6327518 - 6327570
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    ||||| |||||||||| |||||||| |||||| | ||||||||||||||||||    
T  6327518 cgacatcgacacttgtaattacacttaattatataattttttcaaattattaa 6327570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 404
Target Start/End: Complemental strand, 9617494 - 9617442
Alignment:
Q  352 acgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||| | | |||||| |||||||||||||||| |||||||||||    
T  9617494 acgacaccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 404
Target Start/End: Complemental strand, 17435306 - 17435207
Alignment:
Q  307 gattaggcgtgtctcaatgtcggacatgttttgtgtccga--tcgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||| |||||| || ||||| ||| || | ||||||||  ||||||  ||||  |||||||| ||||||||||||||||| ||||||| |||||||||    
T  17435306 gattagacgtgtcccagtgtcgaacacgtgtcgtgtccgacatcgacaaaacactaacacttgtaattacactgaattatgtaattttttaaaattatta 17435207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 400
Target Start/End: Complemental strand, 26562753 - 26562701
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaatt 400  Q
    |||||||||| |||||| | | ||||||||||||||||||||||| |||||||    
T  26562753 cgacacgacatcgacacatataattacactgaattatgtgattttctcaaatt 26562701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 32978899 - 32978951
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtg-attttttcaaattatta 404  Q
    |||||||||||||||| |||||||| |||||||||  ||||||||||||||||    
T  32978899 cgacaccgacacttgtaattacacttaattatgtgttttttttcaaattatta 32978951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 34073342 - 34073398
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||| | | | |||||||||||||||| |||||| |||||||||||    
T  34073342 cgacacgacaccgacccatataattacactgaattatgagattttctcaaattatta 34073398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 404
Target Start/End: Complemental strand, 7086858 - 7086803
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||| |||||||||| | | |||||||| |||||||||||||| |||||||||||    
T  7086858 gacactacaccgacacatataattacactaaattatgtgattttctcaaattatta 7086803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 7973716 - 7973665
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgattttttcaaatta 401  Q
    ||||||||||||||||| | |||||||| |||||||| ||||||| ||||||    
T  7973716 acacgacaccgacacttataattacacttaattatgtaatttttttaaatta 7973665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 404
Target Start/End: Complemental strand, 9027241 - 9027186
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||| | | ||||||| ||||||||||||| | |||||||||||    
T  9027241 gacacgacaccgacacatataattacacggaattatgtgattatctcaaattatta 9027186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 12627577 - 12627628
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||| |||||| | | ||||||||||||||||||||||||||| |||||||    
T  12627577 cgacatcgacacatattattacactgaattatgtgattttttcacattatta 12627628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 402
Target Start/End: Original strand, 13364707 - 13364754
Alignment:
Q  355 acaccgacacttgtgattacactgaattatgtgattttttcaaattat 402  Q
    |||||||||| | ||||||||||||||||| ||||||| |||||||||    
T  13364707 acaccgacacatatgattacactgaattatatgattttctcaaattat 13364754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 19040411 - 19040360
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||| ||||| | | ||||||||||||||||||||||| |||||||||||    
T  19040411 cgacacagacacatataattacactgaattatgtgattttctcaaattatta 19040360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 404
Target Start/End: Complemental strand, 24645539 - 24645488
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgatt-ttttcaaattatta 404  Q
    ||||||||||||||| | || |||||||||||||||| ||||||||||||||    
T  24645539 gacaccgacacttgtaactatactgaattatgtgatttttttcaaattatta 24645488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 404
Target Start/End: Complemental strand, 28862184 - 28862129
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaatt-atgtgattttttcaaattatta 404  Q
    ||||||||||||||| | ||||||||||||||| |||| ||||| |||||||||||    
T  28862184 acacgacaccgacacatatgattacactgaattaatgtcattttatcaaattatta 28862129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 405
Target Start/End: Original strand, 31579242 - 31579277
Alignment:
Q  370 attacactgaattatgtgattttttcaaattattaa 405  Q
    ||||||||||||||||||||||| ||||||||||||    
T  31579242 attacactgaattatgtgattttctcaaattattaa 31579277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 32511666 - 32511717
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||| |||||| | ||||||||||||||||||||||| | |||||||||    
T  32511666 cgacaccaacacttataattacactgaattatgtgattttcttaaattatta 32511717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 33001289 - 33001340
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||| | | |||||| | ||||||||||||||||||||||||||    
T  33001289 cgacaccgacacatataattacatttaattatgtgattttttcaaattatta 33001340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 404
Target Start/End: Complemental strand, 3398729 - 3398627
Alignment:
Q  297 acactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttca 396  Q
    ||||||||| |||||| |||||  |  |||||||||||| | |||||    | |||||||||||| |||| | ||||||||||||||| ||| |||||||    
T  3398729 acactcctctgattagacgtgttccggtgtcggacatgtgtcgtgtc----caacacgacaccgatacttataattacactgaattatatga-tttttca 3398635  T
Q  397 aattatta 404  Q
    ||||||||    
T  3398634 aattatta 3398627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 407
Target Start/End: Original strand, 6349745 - 6349791
Alignment:
Q  361 acacttgtgattacactgaattatgtgattttttcaaattattaatt 407  Q
    |||| ||| |||||| |||||||||| ||||||||||||||||||||    
T  6349745 acacatgtaattacaatgaattatgtaattttttcaaattattaatt 6349791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 7027301 - 7027251
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgatt-ttttcaaattat 402  Q
    |||||||||||| | | ||||||||||||||||||||| ||||||||||||    
T  7027301 cgacaccgacacatataattacactgaattatgtgatttttttcaaattat 7027251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 402
Target Start/End: Original strand, 9024171 - 9024225
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattat 402  Q
    ||||||||||| ||||| | |||||||| |||||||||| ||||| |||||||||    
T  9024171 cgacacgacactgacacatatgattacattgaattatgtcattttctcaaattat 9024225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 404
Target Start/End: Original strand, 9195751 - 9195805
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||| | | |||||||| |||||||| ||||| |||||||||||    
T  9195751 acacgacaccgacacatataattacactaaattatgtcattttctcaaattatta 9195805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 404
Target Start/End: Original strand, 20576626 - 20576684
Alignment:
Q  346 atcgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||| |||||| | ||||||||||||||||  ||||| || ||||||||    
T  20576626 atcgacacgacaccaacacttataattacactgaattatgcaattttctcgaattatta 20576684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 398
Target Start/End: Complemental strand, 1334720 - 1334675
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaa 398  Q
    ||||||||||| ||||||||||| ||||||||||  ||||||||||    
T  1334720 cgacaccgacatttgtgattacattgaattatgtccttttttcaaa 1334675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 13360325 - 13360362
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacat 333  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  13360325 gacactcttcggattaggcgtgtctcagtgtcggacat 13360362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 398
Target Start/End: Original strand, 17327602 - 17327700
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    |||||||||||||||||||||||| |  |||| |||| || | |||||    ||||||||||| ||||| | |  ||||||| |||||||||||||| ||    
T  17327602 gacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtc----cgacacgacactgacacatatagttacactaaattatgtgattttctc 17327697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 404
Target Start/End: Original strand, 25010212 - 25010253
Alignment:
Q  363 acttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||| || || |||||||||||||||||||||||||||||    
T  25010212 acttgtaataacgctgaattatgtgattttttcaaattatta 25010253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 405
Target Start/End: Original strand, 32320664 - 32320721
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    |||||||||||||| || | | || ||| |||||||||||||||| ||||||||||||    
T  32320664 cgacacgacaccgatacatataatgacattgaattatgtgattttatcaaattattaa 32320721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 404
Target Start/End: Complemental strand, 34446618 - 34446573
Alignment:
Q  359 cgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||| | ||||||||||||||||||| ||||| |||||||||||    
T  34446618 cgacacctatgattacactgaattatgtcattttctcaaattatta 34446573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 404
Target Start/End: Complemental strand, 2224290 - 2224234
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||  ||| | |||| ||||||||||||||| ||||||||| |||||||||    
T  2224290 cgacacgacgtcgatatttgtaattacactgaattatatgatttttttaaattatta 2224234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 5462728 - 5462680
Alignment:
Q  370 attacactgaattatgtgattttttcaaattattaattgtatcagtgtc 418  Q
    |||||| |||||||||||||||| ||||||||||||  || ||||||||    
T  5462728 attacaatgaattatgtgattttctcaaattattaacggtgtcagtgtc 5462680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 353 - 405
Target Start/End: Original strand, 5732510 - 5732562
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    |||||||||||| | | |||||||| || ||||||||||| ||||||||||||    
T  5732510 cgacaccgacacatataattacactaaaatatgtgattttctcaaattattaa 5732562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 380
Target Start/End: Complemental strand, 22746021 - 22745989
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaa 380  Q
    |||||||||||||||||||||||||||| ||||    
T  22746021 cgacacgacaccgacacttgtgattacattgaa 22745989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 357 - 405
Target Start/End: Original strand, 25038075 - 25038123
Alignment:
Q  357 accgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    ||||||| |||| |||||||| |||||||| ||||| ||||||||||||    
T  25038075 accgacatttgtaattacactaaattatgtaattttctcaaattattaa 25038123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 354 - 394
Target Start/End: Original strand, 27904037 - 27904077
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    |||||||||| |||| |||||||||||||||||| ||||||    
T  27904037 gacaccgacatttgtaattacactgaattatgtgttttttt 27904077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 354 - 394
Target Start/End: Original strand, 31429004 - 31429044
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    |||||| ||| |||| |||||||||||||||||||||||||    
T  31429004 gacacctacatttgtaattacactgaattatgtgatttttt 31429044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 5e-26; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 296 - 409
Target Start/End: Original strand, 41961591 - 41961706
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    |||||| ||||||||||||||||| || ||||||||| || | |||||||||  ||||||||||||||||||||| ||||||| |||| ||||||| |||    
T  41961591 gacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaataatgtgatattt 41961690  T
Q  394 tcaaattattaattgt 409  Q
    ||||||||||| ||||    
T  41961691 tcaaattattagttgt 41961706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 353 - 431
Target Start/End: Original strand, 51206353 - 51206431
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgtccgtgtccgtatcc 431  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  51206353 cgacaccgacacttgtatttacactgaattatgtgattttttcaaattattagctgtgtcagtgtccgtgtccgtatcc 51206431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 49651728 - 49651837
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatc-gacacgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    |||||| ||||||||||| ||||| |  ||||||| |||| | ||||||| || |||||||||||||||||||| |||||| ||||||||||||||||||    
T  49651728 gacacttctcggattaggtgtgtcccggtgtcggatatgtgtcgtgtccggtccgacacgacaccgacacttgtaattacagtgaattatgtgatttttt 49651827  T
Q  395 caaattatta 404  Q
    ||||||||||    
T  49651828 caaattatta 49651837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 4987232 - 4987342
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    |||||||||||||||||||||||| |  ||||||||| || | |||||| |   ||||||| |||| |||||||| ||||||||||||||||||||||||    
T  4987232 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaattatgtgattttt 4987331  T
Q  394 tcaaattatta 404  Q
    |||||||||||    
T  4987332 tcaaattatta 4987342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 409
Target Start/End: Complemental strand, 10955056 - 10954955
Alignment:
Q  299 actcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaa 398  Q
    ||||||||||||||||||||| || ||||||||| || | ||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  10955056 actcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccga---------caccgacacttgtgattacactgaattatgtgattttttcaaa 10954966  T
Q  399 ttattaattgt 409  Q
    |||||| ||||    
T  10954965 ttattagttgt 10954955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 28918110 - 28918009
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    ||||||||| |||||||||||||| || ||||||||| || | ||||||       ||||||||||||||||| ||||||||||||||||||||||||||    
T  28918110 gacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtcc-------acgacaccgacacttgtaattacactgaattatgtgattttttc 28918018  T
Q  396 aaattatta 404  Q
    |||||||||    
T  28918017 aaattatta 28918009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 352 - 441
Target Start/End: Complemental strand, 1509599 - 1509511
Alignment:
Q  352 acgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgtccgtgtccgtatccatgcttcata 441  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||  ||| ||||||||| |||| |||||| |||||||||    
T  1509599 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcc-tgtctgtatccgtgcttcata 1509511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 409
Target Start/End: Complemental strand, 28812634 - 28812518
Alignment:
Q  295 agacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgatttt 392  Q
    |||||||||||||||||||||||||    |||||||||||| | ||||| ||   | ||||||||||||||||||| | ||||||||||||||||||||     
T  28812634 agacactcctcggattaggcgtgtcctgctgtcggacatgtatcgtgtctgacaccaacacgacaccgacacttgtaactacactgaattatgtgatttc 28812535  T
Q  393 ttcaaattattaattgt 409  Q
    |||||||||||| ||||    
T  28812534 ttcaaattattagttgt 28812518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 308 - 441
Target Start/End: Complemental strand, 14832205 - 14832074
Alignment:
Q  308 attaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    |||||||||||| |  ||||||||| || | |||||||||  ||||||||||| ||||||||| |||||| ||| ||||||||||||||||||||||||     
T  14832205 attaggcgtgtcccggtgtcggacacgtgtcgtgtccgataccgacacgacactgacacttgtaattacattgagttatgtgattttttcaaattattag 14832106  T
Q  406 ttgtatcagtgtccgtgtccgtatccatgcttcata 441  Q
     |||||| |    ||||||||||||| |||||||||    
T  14832105 ctgtatcgg----cgtgtccgtatccgtgcttcata 14832074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 296 - 445
Target Start/End: Complemental strand, 27505358 - 27505211
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    ||||||||||||||||||| |||| |  ||||||||| || | |||||     |||||||||||||||||||| |||||||| |||||||||||||||      
T  27505358 gacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtc----agacacgacaccgacacttgtaattacacttaattatgtgatttttaa 27505263  T
Q  396 aaattattaattgtatcag--tgtccgtgtccgtatccatgcttcataggtt 445  Q
    |||||||||  ||| || |  ||||||| ||||||||| |||||||||||||    
T  27505262 aaattattagctgtgtcggcttgtccgtatccgtatccgtgcttcataggtt 27505211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 34185064 - 34185174
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccga--tcgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    |||||||||||||||||||||||| |  |||||||||  | |  |||||||  | |||||||||||||||||||| ||||||||||||| ||||||||||    
T  34185064 gacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgacatggacacgacaccgacacttgtaattacactgaattgtgtgattttt 34185163  T
Q  394 tcaaattatta 404  Q
    | |||||||||    
T  34185164 tgaaattatta 34185174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 296 - 409
Target Start/End: Complemental strand, 55401182 - 55401078
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    ||||||||||||||||||||||||||  ||||||||| || | ||||||||         ||||||||||||| |||||||| |||||||||||||||||    
T  55401182 gacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccga---------caccgacacttgtaattacactaaattatgtgattttttc 55401092  T
Q  396 aaattattaattgt 409  Q
    ||||||||| ||||    
T  55401091 aaattattagttgt 55401078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 348 - 409
Target Start/End: Complemental strand, 14209177 - 14209116
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  14209177 cgacacgacactgacacttgtaattacactgaattatgtgattttttaaaattattagttgt 14209116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 34910377 - 34910320
Alignment:
Q  352 acgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||    
T  34910377 acgacaccgactcttgtaattacactgaattatgtgattttttcaaattattagttgt 34910320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 25948882 - 25948938
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||| |||||| | |||||||||||||||||||||||||||||||||||    
T  25948882 cgacacgacaccaacacttataattacactgaattatgtgattttttcaaattatta 25948938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 404
Target Start/End: Complemental strand, 26508166 - 26508118
Alignment:
Q  356 caccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttcaaattatta 26508118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 350 - 405
Target Start/End: Original strand, 15796291 - 15796346
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||    
T  15796291 acacgacaccgacaattgtaattacactgaattatatgattttttcaaattattaa 15796346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 351 - 404
Target Start/End: Original strand, 21256984 - 21257037
Alignment:
Q  351 cacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||| |||||||||||| |||| ||||||||||||||||||||||||||||||    
T  21256984 cacgataccgacacttgtaattatactgaattatgtgattttttcaaattatta 21257037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 353 - 405
Target Start/End: Complemental strand, 25775568 - 25775515
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgatt-ttttcaaattattaa 405  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  25775568 cgacaccgacacttgtaattacactgaattatgtgattattttcaaattattaa 25775515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 3164020 - 3164076
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||| | ||||||||  ||||||||||||||||||||||||||||||||||    
T  3164020 cgacacgacatcaacacttgttcttacactgaattatgtgattttttcaaattatta 3164076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 353 - 401
Target Start/End: Original strand, 8587021 - 8587069
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaatta 401  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||    
T  8587021 cgacaccgacacttgtaattacacttaattatgtgattttttcaaatta 8587069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 355 - 403
Target Start/End: Complemental strand, 20503522 - 20503474
Alignment:
Q  355 acaccgacacttgtgattacactgaattatgtgattttttcaaattatt 403  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  20503522 acaccgacacttgtaattacactgaattatgtcattttttcaaattatt 20503474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 7928509 - 7928458
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||| | | |||||||||||||||||||||||||||||||||||    
T  7928509 cgacaccgacacatataattacactgaattatgtgattttttcaaattatta 7928458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 405
Target Start/End: Original strand, 10268487 - 10268538
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||||||    
T  10268487 gacactgacacttgtaattacactaaattatgtgattttttcaaattattaa 10268538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 21479177 - 21479126
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||| || ||||||||||||| |||||||||||||||||||||    
T  21479177 cgacaccgacactagtaattacactgaattgtgtgattttttcaaattatta 21479126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 407
Target Start/End: Complemental strand, 39756299 - 39756241
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaatt 407  Q
    |||||||||||||||||||| |||| | | |||||||||||||||| ||||||||||||    
T  39756299 gacacgacaccgacacttgtaattatattaaattatgtgatttttttaaattattaatt 39756241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 306 - 405
Target Start/End: Complemental strand, 55213070 - 55212970
Alignment:
Q  306 ggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatt 403  Q
    |||||| |||||||||  ||||||||| || ||||| ||||   |||||| |||||||||||||| ||| |||| |||||||||||||||| ||||||||    
T  55213070 ggattatgcgtgtctcggtgtcggacacgtgttgtgcccgacaccgacac-acaccgacacttgtaattgcactaaattatgtgattttttaaaattatt 55212972  T
Q  404 aa 405  Q
    ||    
T  55212971 aa 55212970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 409
Target Start/End: Original strand, 750613 - 750674
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    ||||||||||||||||||||| ||| ||  |||||||||||| |||||||||||||| ||||    
T  750613 cgacacgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgt 750674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 415
Target Start/End: Original strand, 15314873 - 15314938
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagt 415  Q
    |||||||||| |||| | | |||||||| ||||||||||||||||||||||| ||||||| |||||    
T  15314873 acacgacaccaacacatataattacactaaattatgtgattttttcaaattaataattgtgtcagt 15314938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 353 - 442
Target Start/End: Complemental strand, 45451612 - 45451523
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgtccgtgtccgtatccatgcttcatag 442  Q
    |||||||||||| | | |||| |||||| ||||||||||| |||||||||||   || |  |||||||||||||||||| ||||||||||    
T  45451612 cgacaccgacacatattattatactgaagtatgtgattttctcaaattattagcagtgttcgtgtccgtgtccgtatccgtgcttcatag 45451523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 404
Target Start/End: Original strand, 8039779 - 8039886
Alignment:
Q  299 actcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttttca 396  Q
    |||| |||||||| ||||||| |  |||||||||||| |  |||||||   ||||||||||||||||| | | ||||||||||||||| | ||||| |||    
T  8039779 actcttcggattaagcgtgtcccggtgtcggacatgtctcatgtccgacaccgacacgacaccgacacatataattacactgaattatataattttctca 8039878  T
Q  397 aattatta 404  Q
    ||||||||    
T  8039879 aattatta 8039886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 409
Target Start/End: Complemental strand, 14217010 - 14216895
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcg--acacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    |||||| ||||||||||| ||||| || ||||| ||| || | ||||||||     ||||||||| ||||||||| ||||||||||||||| |||| |||    
T  14217010 gacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaattatatgatattt 14216911  T
Q  394 tcaaattattaattgt 409  Q
    | ||||||||| ||||    
T  14216910 taaaattattagttgt 14216895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 409
Target Start/End: Complemental strand, 14223139 - 14223024
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcg--acacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    |||||| ||||||||||| ||||| || ||||| ||| || | ||||||||     ||||||||| ||||||||| ||||||||||||||| |||| |||    
T  14223139 gacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaattatatgatattt 14223040  T
Q  394 tcaaattattaattgt 409  Q
    | ||||||||| ||||    
T  14223039 taaaattattagttgt 14223024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 404
Target Start/End: Complemental strand, 14829753 - 14829698
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||||||| |||||  ||||||||||||| ||||||||||||||    
T  14829753 cgacacgacaccgacacttgtaattaccatgaattatgtgat-ttttcaaattatta 14829698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 409
Target Start/End: Original strand, 16000016 - 16000072
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    ||||||||||||||||  |||||||||||||||| ||||||| ||||||||| ||||    
T  16000016 cgacaccgacacttgtagttacactgaattatgttatttttttaaattattagttgt 16000072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 405
Target Start/End: Complemental strand, 16789075 - 16789019
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    ||||||||||| |||||| | ||||||||||||||| ||||||||| ||||||||||    
T  16789075 gacacgacaccaacacttataattacactgaattatatgatttttttaaattattaa 16789019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 8383316 - 8383265
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||| | ||||||||||||||| ||||||| |||||||||||    
T  8383316 cgacaccgacacttataattacactgaattatatgattttctcaaattatta 8383265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 26492205 - 26492256
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||| |||||| ||||||||||||| | |||||||||||||||||||    
T  26492205 cgacaccgatacttgtaattacactgaattgtatgattttttcaaattatta 26492256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 40993278 - 40993376
Alignment:
Q  287 tgaatcatagacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgt 386  Q
    |||| ||| |||||||||||||||||||||||| |  |||||||||||| | |||||         |||||||||||| | | |||||||||||||||||    
T  40993278 tgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtc---------cgacaccgacacatataattacactgaattatgt 40993368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 404
Target Start/End: Original strand, 4990964 - 4991018
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||| ||||||||||| ||||||||||||||||| ||||| ||||| |||||    
T  4990964 acacgacgccgacacttgtaattacactgaattatgtaattttctcaaactatta 4991018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 395
Target Start/End: Complemental strand, 8593196 - 8593154
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    |||||||||||||||| |||| |||||||||||||||||||||    
T  8593196 cgacaccgacacttgtaattatactgaattatgtgattttttc 8593154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 404
Target Start/End: Complemental strand, 14979223 - 14979189
Alignment:
Q  370 attacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||||||||||||||||||||||    
T  14979223 attacactgaattatgtgattttttcaaattatta 14979189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 404
Target Start/End: Original strand, 17005616 - 17005670
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||| |||||||||||| | ||||||||||||||| ||||||| |||||||||||    
T  17005616 acacaacaccgacacttataattacactgaattatatgattttatcaaattatta 17005670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 404
Target Start/End: Complemental strand, 20691377 - 20691327
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||| | ||||||||||||||||||| ||||| |||||||||||    
T  20691377 gacaccgacacatatgattacactgaattatgtcattttctcaaattatta 20691327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 353 - 442
Target Start/End: Original strand, 13845525 - 13845614
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgtccgtgtccgtatccatgcttcatag 442  Q
    |||||||||||| | | ||||||||| ||| ||||||||| | |||   |||| ||| || |||||||||||||||||| ||||||||||    
T  13845525 cgacaccgacacatataattacactgcattttgtgattttctaaaaaatttaactgtgtcggtgtccgtgtccgtatccgtgcttcatag 13845614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 359 - 404
Target Start/End: Original strand, 35994744 - 35994788
Alignment:
Q  359 cgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||    
T  35994744 cgacacttgtaattacactgaattatgtga-tttttcaaattatta 35994788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 404
Target Start/End: Complemental strand, 9800104 - 9800048
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||||||   ||||||| ||||||||| ||||| |||||||||||    
T  9800104 cgacacgacaccgacacttacaattacacggaattatgtaattttctcaaattatta 9800048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 409
Target Start/End: Original strand, 10335286 - 10335342
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    ||||||||||||||||  ||||||| || ||||||| ||||||||||||||| ||||    
T  10335286 cgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgt 10335342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 11610573 - 11610529
Alignment:
Q  360 gacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||| | ||||||||||||||||||||||| |||||||||    
T  11610573 gacacttgtaactacactgaattatgtgatttttttaaattatta 11610529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 398
Target Start/End: Original strand, 14338484 - 14338528
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaa 398  Q
    |||||||||| ||||||||||| |||||||||| |||||||||||    
T  14338484 gacaccgacatttgtgattacattgaattatgtcattttttcaaa 14338528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 404
Target Start/End: Complemental strand, 14747625 - 14747569
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgatt-ttttcaaattatta 404  Q
    |||||||||| ||| ||||| |||||||| |||||||||||| ||||||||||||||    
T  14747625 gacacgacacggacccttgtaattacactaaattatgtgatttttttcaaattatta 14747569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 442
Target Start/End: Complemental strand, 18427008 - 18426917
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatc--agtgtccgtgtccgtatccatgcttcatag 442  Q
    |||||||||||  | | ||||||| ||||||||||||||||| ||||||||| | || ||   |||||||||||||||||  ||||||||||    
T  18427008 cgacaccgacatatataattacaccgaattatgtgattttttgaaattattagtggtgtcggcgtgtccgtgtccgtatctgtgcttcatag 18426917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 404
Target Start/End: Complemental strand, 1550203 - 1550148
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||| ||||| | | ||||||||||||  |||||||||||||||||||||    
T  1550203 gacacgacactgacacctataattacactgaatagtgtgattttttcaaattatta 1550148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 405
Target Start/End: Complemental strand, 4201438 - 4201403
Alignment:
Q  370 attacactgaattatgtgattttttcaaattattaa 405  Q
    |||||||| |||||||||||||||||||||||||||    
T  4201438 attacacttaattatgtgattttttcaaattattaa 4201403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 402
Target Start/End: Original strand, 8789500 - 8789599
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    ||||||||||||||||||||||||||  |||| |||||||   |||||   ||    |||||||||||| | | ||||||| ||||||||||||||| ||    
T  8789500 gacactcctcggattaggcgtgtctcggtgtccgacatgt---gtgtcgtgtc----cgacaccgacacatataattacacggaattatgtgattttctc 8789592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 404
Target Start/End: Complemental strand, 11093633 - 11093578
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||| |||| | |||||||  |||||||||| |||||||||||||||||    
T  11093633 gacacgacaccaacacatctgattactttgaattatgtcattttttcaaattatta 11093578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 424
Target Start/End: Complemental strand, 21861620 - 21861557
Alignment:
Q  361 acacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgtccgtgtc 424  Q
    |||||| ||||||||||||||||||| |||||| |||||| |||  ||| || |||||||||||    
T  21861620 acacttatgattacactgaattatgtcatttttccaaattgttatctgtgtcggtgtccgtgtc 21861557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 417
Target Start/End: Complemental strand, 29508486 - 29508439
Alignment:
Q  370 attacactgaattatgtgattttttcaaattattaattgtatcagtgt 417  Q
    ||||||||||||||| ||||||||||||||||||| | ||||| ||||    
T  29508486 attacactgaattatatgattttttcaaattattagtggtatcggtgt 29508439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 38731277 - 38731226
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||| | | | ||||||||||||||||||||||| |||||||||    
T  38731277 cgacaccgacacatataactacactgaattatgtgattttttaaaattatta 38731226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 396
Target Start/End: Complemental strand, 3865732 - 3865690
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttca 396  Q
    ||||||||||||||| |||| |||||||||||||| |||||||    
T  3865732 gacaccgacacttgtaattatactgaattatgtgagtttttca 3865690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 404
Target Start/End: Complemental strand, 11252020 - 11251986
Alignment:
Q  370 attacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||||||||| |||||||||||    
T  11252020 attacactgaattatgtgattttctcaaattatta 11251986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 404
Target Start/End: Complemental strand, 11666006 - 11665952
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||| | | |||||||| |||| ||||||||| |||||||||||    
T  11666006 acacgacaccgacacatataattacactaaattgtgtgattttatcaaattatta 11665952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 417
Target Start/End: Original strand, 8930829 - 8930894
Alignment:
Q  352 acgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgt 417  Q
    |||||| |||||| | | ||||||  ||||||||||||||||| |||||||| || ||||||||||    
T  8930829 acgacatcgacacatataattacatcgaattatgtgattttttaaaattatttatggtatcagtgt 8930894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 404
Target Start/End: Original strand, 12704663 - 12704708
Alignment:
Q  359 cgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||| | |||||||| |||||||||| |||||||||||||||||    
T  12704663 cgacacctatgattacattgaattatgtcattttttcaaattatta 12704708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 15505790 - 15505851
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtga-ttttttcaaattattaattgtatca 413  Q
    ||||||| |||||| | ||||||||||||||| | | |||||| ||||||||||||||||||    
T  15505790 cgacaccaacacttataattacactgaattatataattttttttaaattattaattgtatca 15505851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 405
Target Start/End: Original strand, 16192745 - 16192802
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    |||||||||| | |||| | | ||||||||||||||||| ||||| ||||||||||||    
T  16192745 cgacacgacatcaacacatataattacactgaattatgttattttctcaaattattaa 16192802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 443
Target Start/End: Complemental strand, 21479096 - 21479067
Alignment:
Q  414 gtgtccgtgtccgtatccatgcttcatagg 443  Q
    ||||||||||||||||||||||||||||||    
T  21479096 gtgtccgtgtccgtatccatgcttcatagg 21479067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 440
Target Start/End: Original strand, 29112297 - 29112369
Alignment:
Q  370 attacactgaattatgtgattttttcaaattattaattgtatca--gtgtccgtgtccgtatccatgcttcat 440  Q
    ||||||||||||||| ||||||| |||||| |||| | || |||  ||||| |||||||||||| ||||||||    
T  29112297 attacactgaattatatgattttctcaaataattagtggtgtcaacgtgtcagtgtccgtatccgtgcttcat 29112369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 404
Target Start/End: Original strand, 34307786 - 34307831
Alignment:
Q  359 cgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||| | ||||||||||| ||||||||||| |||||||||||    
T  34307786 cgacacttataattacactgaaatatgtgattttctcaaattatta 34307831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 398
Target Start/End: Complemental strand, 44427904 - 44427855
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaa 398  Q
    |||||||||||||||| |||||||||| || ||||||| ||||| |||||    
T  44427904 gacacgacaccgacacatgtgattacattggattatgtcattttctcaaa 44427855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 296 - 344
Target Start/End: Original strand, 6525635 - 6525683
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtcc 344  Q
    |||||||||||||||||| |||||||  | |||||||||| ||||||||    
T  6525635 gacactcctcggattaggtgtgtctcggtatcggacatgtgttgtgtcc 6525683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 296 - 324
Target Start/End: Complemental strand, 8842436 - 8842408
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaat 324  Q
    |||||||||||||||||||||||||||||    
T  8842436 gacactcctcggattaggcgtgtctcaat 8842408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 11313795 - 11313851
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||  |||| | | |||||||| |||||||||||||| |||||||||||    
T  11313795 cgacacgacactaacacatataattacactaaattatgtgattttctcaaattatta 11313851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 406
Target Start/End: Original strand, 14840308 - 14840344
Alignment:
Q  370 attacactgaattatgtgattttttcaaattattaat 406  Q
    ||||||||||||||||||||||| | |||||||||||    
T  14840308 attacactgaattatgtgattttctgaaattattaat 14840344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 404
Target Start/End: Complemental strand, 21149111 - 21149075
Alignment:
Q  368 tgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  21149111 tgattacactgaattatgtcattttctcaaattatta 21149075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 22774065 - 22774121
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||| ||||||||||||| | ||||||||||| ||||||| ||| || ||||||||    
T  22774065 cgacatgacaccgacacttataattacactgaaatatgtgactttgtctaattatta 22774121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 353 - 405
Target Start/End: Complemental strand, 25093561 - 25093509
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    |||||||||||| | | ||||||||||||| ||||||||| |||||| |||||    
T  25093561 cgacaccgacacatataattacactgaattgtgtgattttctcaaatcattaa 25093509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 442
Target Start/End: Original strand, 28964191 - 28964338
Alignment:
Q  287 tgaatcatagacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgt 386  Q
    |||| ||| |||||||||||||||||||||||| || ||||||| |||| | ||||||||         ||| ||||||||| |||||||||||||||||    
T  28964191 tgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccga---------cacagacacttgtaattacactgaattatgt 28964281  T
Q  387 gattttttcaaattattaattgtatcagtgtcc-gtgtccgtatccatgcttcatag 442  Q
    ||||||||||||||||||  | | ||| ||||| |||||||||||| ||||||||||    
T  28964282 gattttttcaaattattagctatgtcaatgtccagtgtccgtatccgtgcttcatag 28964338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 297 - 409
Target Start/End: Complemental strand, 19482785 - 19482671
Alignment:
Q  297 acactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    ||||||||||||||||| ||||| || ||||||||| || | |||||| ||  |||||||||||| |||||||| ||||||| |||||||||||| ||||    
T  19482785 acactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacacgacaccaacacttgtaattacaccgaattatgtgatatttt 19482686  T
Q  395 caaattattaattgt 409  Q
    |||||||||| ||||    
T  19482685 caaattattagttgt 19482671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 353 - 426
Target Start/End: Original strand, 54580023 - 54580096
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgtccgtgtccg 426  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||    
T  54580023 cgacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgtcagcgtccgtgtccg 54580096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 3947713 - 3947817
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    |||||||||||||||||| |||||    ||||||||| || | |||||    ||||||||||| ||||||||| |||||||||||||||| |||||||||    
T  3947713 gacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtc----cgacacgacactgacacttgtaattacactgaattatgcgattttttc 3947808  T
Q  396 aaattatta 404  Q
    |||||||||    
T  3947809 aaattatta 3947817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 348 - 440
Target Start/End: Complemental strand, 4383431 - 4383338
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatc--agtgtccgtgtccgtatccatgcttcat 440  Q
    ||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||| |||||||   ||||| |||||||||||| ||||||||    
T  4383431 cgacacgacactgacatttgtaattacactgaattatgtgat-ttttcaaattattagttgtatcgacgtgtcagtgtccgtatccgtgcttcat 4383338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 404
Target Start/End: Original strand, 11596348 - 11596403
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  11596348 gacacgacacctacacttgtaattacactgaattatgtgattttttcaaattatta 11596403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 409
Target Start/End: Complemental strand, 16073510 - 16073398
Alignment:
Q  287 tgaatcatagacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgt 386  Q
    |||| ||| ||||||||||||||||||||||||| | |||||||||||| | ||||||||         ||||||||||||| ||||||||||||||||     
T  16073510 tgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccga---------caccgacacttgtaattacactgaattatgc 16073420  T
Q  387 gattttttcaaattattaattgt 409  Q
    || ||||||||||||||| ||||    
T  16073419 ga-tttttcaaattattacttgt 16073398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 355 - 404
Target Start/End: Complemental strand, 29205501 - 29205452
Alignment:
Q  355 acaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29205501 acaccgacacttgtaattacactgaattatgtgattttttcaaattatta 29205452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 355 - 407
Target Start/End: Original strand, 6485613 - 6485665
Alignment:
Q  355 acaccgacacttgtgattacactgaattatgtgattttttcaaattattaatt 407  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttttcaaattattaatt 6485665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 12895111 - 12895167
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  12895111 cgacacgacaccgacacttgtaattactttgaattatgtgattttttcaaattatta 12895167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 404
Target Start/End: Complemental strand, 21945614 - 21945511
Alignment:
Q  292 catagacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattt 391  Q
    |||||||||||||||||||||||||||  |  |||||||||||| |  |||||||         ||||||||||||| ||||||||||||||||| ||||    
T  21945614 catagacactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccga---------caccgacacttgtaattacactgaattatgtcattt 21945524  T
Q  392 tttcaaattatta 404  Q
    |||||||||||||    
T  21945523 tttcaaattatta 21945511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 23292938 - 23293037
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    |||||||||||||||||||||||| |  ||||||||| || | ||||||||         ||||||||||||| |||| |||||||||||||||||||||    
T  23292938 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccga---------caccgacacttgtaattatactgaattatgtgattttttc 23293028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 296 - 394
Target Start/End: Original strand, 715557 - 715648
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    |||||||||||||||||||||||| |  |||||||||||| | ||||       ||| |||||| |||||||| |||||||||||||||||||||||||    
T  715557 gacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt-------acaagacaccaacacttgtaattacactgaattatgtgatttttt 715648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 296 - 394
Target Start/End: Original strand, 752883 - 752974
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    |||||||||||||||||||||||| |  |||||||||||| | ||||       ||| |||||| |||||||| |||||||||||||||||||||||||    
T  752883 gacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt-------acaagacaccaacacttgtaattacactgaattatgtgatttttt 752974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 424
Target Start/End: Complemental strand, 4157208 - 4157138
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgtccgtgtc 424  Q
    |||||||||||||||| ||| |||| ||||||||||| |||||||||||||| |||| |||||||| |||||    
T  4157208 cgacaccgacacttgtaattgcactaaattatgtgat-ttttcaaattattagttgtgtcagtgtctgtgtc 4157138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 12797338 - 12797388
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  12797338 cgacaccgacacttgtaattacactgaattatgtga-tttttcaaattatta 12797388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 409
Target Start/End: Original strand, 27706174 - 27706233
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    |||||||||  |||||||| |||||||| |||||||||||||||| ||||||||||||||    
T  27706174 acacgacactcacacttgtaattacactaaattatgtgatttttttaaattattaattgt 27706233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 394
Target Start/End: Complemental strand, 28084631 - 28084540
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    |||||||||||||||||||||||| || ||||||||| ||     |||  | ||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  28084631 gacactcctcggattaggcgtgtcccagtgtcggacacgt-----gtc--accgacacgacacagacacttgtaattacattgaattatgtgatttttt 28084540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 30982819 - 30982929
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    ||||||| | |||||||||||||| |  ||||||||| || | ||||| ||   ||||||||||||||||||| | ||||||||||| |||||||||||     
T  30982819 gacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaatatgtgattttc 30982918  T
Q  394 tcaaattatta 404  Q
    |||||| ||||    
T  30982919 tcaaatcatta 30982929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 404
Target Start/End: Complemental strand, 30299008 - 30298954
Alignment:
Q  351 cacgacaccgacacttgtgattacactgaattatgtga-ttttttcaaattatta 404  Q
    |||||||||||||||||| ||||||||||||||||| | ||||||||||||||||    
T  30299008 cacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattatta 30298954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 404
Target Start/End: Complemental strand, 30327876 - 30327822
Alignment:
Q  351 cacgacaccgacacttgtgattacactgaattatgtga-ttttttcaaattatta 404  Q
    |||||||||||||||||| ||||||||||||||||| | ||||||||||||||||    
T  30327876 cacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattatta 30327822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 22234885 - 22234993
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtga-ttttttcaaattattaattgtatc--agtgtccgtgtccgtatccatgcttcataggt 444  Q
    ||||||||||||||||| |   ||||||||||||||||||| |||||||||||| |||   || ||   |||||||||||||||||| ||||||||||||    
T  22234885 cgacacgacaccgacacatagaattacactgaattatgtgatttttttcaaatttttagcggtgtcggcgtgtccgtgtccgtatccgtgcttcataggt 22234984  T
Q  445 tttgactga 453  Q
     || |||||    
T  22234985 ctttactga 22234993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 409
Target Start/End: Original strand, 24613696 - 24613757
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    ||||| |||||||||||||||  ||||| |||||||||||||||| ||||||||||| ||||    
T  24613696 cgacatgacaccgacacttgtacttacattgaattatgtgattttctcaaattattagttgt 24613757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 353 - 394
Target Start/End: Complemental strand, 42640588 - 42640547
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  42640588 cgacaccgacacttgtaattacactgaattatgtgatttttt 42640547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 409
Target Start/End: Original strand, 12895274 - 12895330
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    |||||||||||||| | |||||||  |||||||||||||||||||||||||| ||||    
T  12895274 cgacaccgacacttataattacacaaaattatgtgattttttcaaattattatttgt 12895330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 49431085 - 49431033
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgatt-ttttcaaattatta 404  Q
    |||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  49431085 cgacaccgacacttttaattacactgaattatgtgatttttttcaaattatta 49431033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 404
Target Start/End: Complemental strand, 51701322 - 51701266
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||  |||||||| |||||||| |||||||| |||||||||||||||||    
T  51701322 cgacacgacactaacacttgtaattacactcaattatgtaattttttcaaattatta 51701266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 2361975 - 2362026
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||| | |||||||| |||||||| |||||||||||||||||    
T  2361975 cgacaccgacacttttaattacactaaattatgtaattttttcaaattatta 2362026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 8423718 - 8423769
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||| || | ||||||||||||||||||||||| |||||||||||    
T  8423718 cgacaccgacatttataattacactgaattatgtgattttctcaaattatta 8423769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 38847012 - 38847063
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||| ||||||||| |||||||||||| || |||||||||||||||||||    
T  38847012 cgacactgacacttgtaattacactgaataatatgattttttcaaattatta 38847063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 412
Target Start/End: Complemental strand, 40481687 - 40481637
Alignment:
Q  361 acacttgtgattacactgaattatgtgattttttcaaattattaattgtatc 412  Q
    |||||||| |||||||||||||||||||| |||||||||||||| |||||||    
T  40481687 acacttgtaattacactgaattatgtgat-ttttcaaattattagttgtatc 40481637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 4157552 - 4157455
Alignment:
Q  287 tgaatcatagacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgt 386  Q
    |||| ||||||||||||||| ||||||||| ||||  |||||||||||| | |||||         |||||||||||||||| ||| |||| ||||||||    
T  4157552 tgaagcatagacactcctcgaattaggcgtttctcggtgtcggacatgtgtcgtgtc---------cgacaccgacacttgtaattgcactaaattatgt 4157462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 406
Target Start/End: Original strand, 5775353 - 5775411
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaat 406  Q
    ||||| ||||||||||| | | |||||||| |||||||||||||| |||||||||||||    
T  5775353 cgacatgacaccgacacatataattacacttaattatgtgattttctcaaattattaat 5775411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 442
Target Start/End: Original strand, 15659755 - 15659849
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgtccgtgtccgtatccatgcttcatag 442  Q
    |||||||||||| |||| | | ||||||| |||||||| |||||| |||||||||||   || |  |||| |||||||||||| |||||||||||    
T  15659755 cgacacgacaccaacacatataattacaccgaattatgagattttctcaaattattagcagtgttggtgttcgtgtccgtatcaatgcttcatag 15659849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 404
Target Start/End: Original strand, 16303263 - 16303317
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||||| |||||||| |||||| | ||||||||||| |||||    
T  16303263 acacgacaccgacacttgtaattacactaaattatatcattttttcaaaatatta 16303317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 404
Target Start/End: Original strand, 35157986 - 35158036
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||| | |||||||| ||||||||||||||| ||||||||||    
T  35157986 gacaccgacacttataattacactaaattatgtgatttttccaaattatta 35158036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 398
Target Start/End: Complemental strand, 37496768 - 37496718
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaa 398  Q
    |||||| ||||||||||||||||||||| |||||||||| ||||| |||||    
T  37496768 cgacacaacaccgacacttgtgattacattgaattatgtcattttctcaaa 37496718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 353 - 398
Target Start/End: Original strand, 6879465 - 6879510
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaa 398  Q
    |||||||||||||||| |||||||| ||||||||||||||| ||||    
T  6879465 cgacaccgacacttgtaattacacttaattatgtgatttttccaaa 6879510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 296 - 394
Target Start/End: Complemental strand, 19312453 - 19312353
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    |||||| ||| |||||| ||||||||  ||||||||| || | || |||||   |||||||||||||| |||| | |||||||||||| |||||||||||    
T  19312453 gacacttctcagattagacgtgtctcggtgtcggacacgtgtcgtatccgacaacgacacgacaccgatacttataattacactgaatcatgtgattttt 19312354  T
Q  394 t 394  Q
    |    
T  19312353 t 19312353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 349 - 405
Target Start/End: Original strand, 28000738 - 28000795
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgatt-ttttcaaattattaa 405  Q
    |||| ||||||||||||||| ||||||||||||||| ||||| |||| ||||||||||    
T  28000738 gacatgacaccgacacttgtaattacactgaattatatgattattttaaaattattaa 28000795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 353 - 406
Target Start/End: Original strand, 40179636 - 40179689
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaat 406  Q
    |||||||||| | | | ||||||||||||||||||||||||||||| |||||||    
T  40179636 cgacaccgacgcatataattacactgaattatgtgattttttcaaactattaat 40179689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 427
Target Start/End: Original strand, 15724498 - 15724624
Alignment:
Q  299 actcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgatttt-ttc 395  Q
    |||||||||||||||||||| |   |||| |||| || ||||||||||   |||||||||||||||     | ||||  ||||||||| ||||||| |||    
T  15724498 actcctcggattaggcgtgttttggtgtctgacacgtgttgtgtccgacaccgacacgacaccgac-----taattatgctgaattatatgatttttttc 15724592  T
Q  396 aaattattaattgtatcagtgtccgtgtccgt 427  Q
    ||||||||| |||| ||||||||||| |||||    
T  15724593 aaattattagttgtgtcagtgtccgtatccgt 15724624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 848069 - 847959
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    ||||||||| |||||||| ||||| |  |||  |||| |||| ||||||||   | ||| ||||||||||||||| |||| | |||||||||| |||||     
T  848069 gacactccttggattaggtgtgtcccggtgttcgacacgtttcgtgtccgacaccaacaagacaccgacacttgtaattatagtgaattatgtaattttc 847970  T
Q  394 tcaaattatta 404  Q
    |||||||||||    
T  847969 tcaaattatta 847959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 405
Target Start/End: Complemental strand, 903964 - 903929
Alignment:
Q  370 attacactgaattatgtgattttttcaaattattaa 405  Q
    ||||||||||||||||||||||| ||||||||||||    
T  903964 attacactgaattatgtgattttctcaaattattaa 903929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 3064880 - 3064919
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgt 335  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  3064880 gacactcctcggattaggcgtgtctcagagtcggacatgt 3064919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 15029824 - 15029773
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||| |||| | | |||||||||||||||||||| ||||||||||||||    
T  15029824 cgacaccaacacatataattacactgaattatgtgatattttcaaattatta 15029773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 405
Target Start/End: Original strand, 22440617 - 22440652
Alignment:
Q  370 attacactgaattatgtgattttttcaaattattaa 405  Q
    ||||||||||||||||||||||| ||||||||||||    
T  22440617 attacactgaattatgtgattttctcaaattattaa 22440652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 344
Target Start/End: Complemental strand, 29205574 - 29205527
Alignment:
Q  297 acactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtcc 344  Q
    ||||||||||||||||||||||| || |||||||||||| | ||||||    
T  29205574 acactcctcggattaggcgtgtcccagtgtcggacatgtgtcgtgtcc 29205527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 404
Target Start/End: Complemental strand, 37203315 - 37203272
Alignment:
Q  361 acacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||| |||||||| |||||||| |||||||||||||||||    
T  37203315 acacttgtaattacactaaattatgtcattttttcaaattatta 37203272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 404
Target Start/End: Complemental strand, 50280947 - 50280889
Alignment:
Q  348 cgacacgacaccgacacttgtgattacac--tgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||| ||||||| |||||||  | |||||||||| |||||||||||||||    
T  50280947 cgacacgacaccggcacttgtaattacacacttaattatgtgaatttttcaaattatta 50280889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 394
Target Start/End: Original strand, 11797623 - 11797669
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    |||||| ||||||||||||||||||||| | |||||||| |||||||    
T  11797623 cgacacaacaccgacacttgtgattacattaaattatgtcatttttt 11797669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 404
Target Start/End: Original strand, 14465092 - 14465126
Alignment:
Q  370 attacactgaattatgtgattttttcaaattatta 404  Q
    |||||| ||||||||||||||||||||||||||||    
T  14465092 attacattgaattatgtgattttttcaaattatta 14465126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 404
Target Start/End: Complemental strand, 33950194 - 33950144
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||| | |||||||| | |||||||||||||| |||||||||||    
T  33950194 gacaccgacacatatgattacattaaattatgtgattttctcaaattatta 33950144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 404
Target Start/End: Complemental strand, 36635366 - 36635332
Alignment:
Q  370 attacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||||||||| |||||||||||    
T  36635366 attacactgaattatgtgattttctcaaattatta 36635332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 442
Target Start/End: Original strand, 46083987 - 46084081
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcag-tgtccgtgtccgtatccatgcttcatag 442  Q
    |||||||||||||||| | | ||||||||  ||||||||||||  | |||  ||||  ||| || | ||||||||||||||||||||||||||||    
T  46083987 gacacgacaccgacacatataattacactagattatgtgatttactaaaacaattagctgtgtccggtgtccgtgtccgtatccatgcttcatag 46084081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 404
Target Start/End: Complemental strand, 47264044 - 47263994
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||| ||||| |||| ||||||| |||||||||||||||| ||||||||||    
T  47264044 gacatcgacatttgtaattacacagaattatgtgatttttacaaattatta 47263994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 397
Target Start/End: Original strand, 10164861 - 10164898
Alignment:
Q  360 gacacttgtgattacactgaattatgtgattttttcaa 397  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  10164861 gacacttgtgattacattgaattatgtcattttttcaa 10164898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 394
Target Start/End: Complemental strand, 12708210 - 12708165
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    ||||||||| |||||||||| ||||||||||||||| | |||||||    
T  12708210 gacacgacatcgacacttgtaattacactgaattatttcatttttt 12708165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 398
Target Start/End: Complemental strand, 13307936 - 13307891
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaa 398  Q
    ||||||| ||||||||||||||| |||||||||| ||||| |||||    
T  13307936 cgacaccaacacttgtgattacattgaattatgtcattttctcaaa 13307891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 405
Target Start/End: Original strand, 14126118 - 14126163
Alignment:
Q  360 gacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    ||||||| | ||||||||||||||||||| ||| ||||||||||||    
T  14126118 gacacttataattacactgaattatgtgactttatcaaattattaa 14126163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 403
Target Start/End: Original strand, 30103358 - 30103406
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaattatt 403  Q
    ||||||||||| | |||||||||| |||||||||||||| ||||||||||    
T  30103358 gacaccgacacatatgattacact-aattatgtgattttctcaaattatt 30103406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 443
Target Start/End: Complemental strand, 46160881 - 46160852
Alignment:
Q  414 gtgtccgtgtccgtatccatgcttcatagg 443  Q
    ||||||||||||||||||||||||||||||    
T  46160881 gtgtccgtgtccgtatccatgcttcatagg 46160852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 404
Target Start/End: Complemental strand, 7012130 - 7012074
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||| ||||||| || | |||| |||||||||||||| ||||| |||||||||||    
T  7012130 cgacacaacaccgatacctatgatcacactgaattatgtcattttctcaaattatta 7012074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 18513236 - 18513292
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||| |||| ||||| | |||||||| |||||||||| ||||| |||||||||||    
T  18513236 cgacacaacactgacacatatgattacattgaattatgtcattttctcaaattatta 18513292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 404
Target Start/End: Original strand, 20743293 - 20743329
Alignment:
Q  368 tgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  20743293 tgattacactgaattatgtcattttctcaaattatta 20743329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 402
Target Start/End: Complemental strand, 24999086 - 24999054
Alignment:
Q  370 attacactgaattatgtgattttttcaaattat 402  Q
    ||||||||||||| |||||||||||||||||||    
T  24999086 attacactgaattgtgtgattttttcaaattat 24999054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 404
Target Start/End: Original strand, 31243563 - 31243599
Alignment:
Q  368 tgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  31243563 tgattacactgaattatgtcattttctcaaattatta 31243599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 353 - 409
Target Start/End: Original strand, 34306804 - 34306859
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    |||||||||||||||| ||||||||  ||||| ||| ||||||||||||||| ||||    
T  34306804 cgacaccgacacttgtaattacactacattatctga-tttttcaaattattagttgt 34306859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 5e-23; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 30717471 - 30717581
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    ||||||||| ||||||||||| || || ||||| ||| || | ||||||||   |||||||||| |||||||||| ||||||||||||||||||||||||    
T  30717471 gacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtgattttt 30717570  T
Q  394 tcaaattatta 404  Q
    |||||||||||    
T  30717571 tcaaattatta 30717581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 296 - 403
Target Start/End: Complemental strand, 37419861 - 37419752
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    |||||||||||||||||||||||| |  ||||||||| |  | ||||||||   ||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  37419861 gacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacacgacaccggcacttgtaattacactgaattttgtgattttt 37419762  T
Q  394 tcaaattatt 403  Q
    ||||||||||    
T  37419761 tcaaattatt 37419752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 296 - 409
Target Start/End: Complemental strand, 26769629 - 26769514
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    |||||||||||||||||||||||| || ||||||||| || | |||||||||  ||||| ||||||||||||||| |||||||   || ||||||| |||    
T  26769629 gacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacatgacaccgacacttgtaattacaccagataatgtgatattt 26769530  T
Q  394 tcaaattattaattgt 409  Q
    ||||||||||| ||||    
T  26769529 tcaaattattagttgt 26769514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 296 - 427
Target Start/End: Original strand, 2438671 - 2438793
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    |||||||||||||||||||||||| |  |||||||||||| | ||||||||         ||||||||||||| |||||||||||||||||||||||||     
T  2438671 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccga---------caccgacacttgtaattacactgaattatgtgattttttg 2438761  T
Q  396 aaattattaattgtatcagtgtccgtgtccgt 427  Q
    |||||||||  ||| |||| ||| ||||||||    
T  2438762 aaattattagctgtgtcagcgtcagtgtccgt 2438793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 15657991 - 15657872
Alignment:
Q  287 tgaatcatagacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccga--tcgacacgacaccgacacttgtgattacactgaattat 384  Q
    |||| ||| ||||||||||||| |||||||||| |   |||||||| || | | ||||||  || |||||||||||||| |||| |||||||||||||||    
T  15657991 tgaagcatggacactcctcggactaggcgtgtcccggcgtcggacacgtgtcgcgtccgacatcaacacgacaccgacatttgtaattacactgaattat 15657892  T
Q  385 gtgattttttcaaattatta 404  Q
    ||||||||| ||||||||||    
T  15657891 gtgatttttacaaattatta 15657872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 409
Target Start/End: Original strand, 23058437 - 23058499
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtga-ttttttcaaattattaattgt 409  Q
    ||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||    
T  23058437 cgacacgacaccgacacttgtaattacactggattatgtgatttttttcaaattattaattgt 23058499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 409
Target Start/End: Original strand, 36756284 - 36756400
Alignment:
Q  295 agacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcg--acacgacaccgacacttgtgattacactgaattatgtgatttt 392  Q
    |||||||||| |||||||||||||  |  |||||||||||| |||||| |||     ||||||||||||||||| | ||||||||||||||||| ||||     
T  36756284 agacactcctaggattaggcgtgttgcggtgtcggacatgtgttgtgttcgacactaacacgacaccgacacttataattacactgaattatgttatttc 36756383  T
Q  393 ttcaaattattaattgt 409  Q
    |||||||||||| ||||    
T  36756384 ttcaaattattagttgt 36756400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 12668418 - 12668474
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||    
T  12668418 cgacacgacaccgacacttataattacactgaattatgtcattttttcaaattatta 12668474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 409
Target Start/End: Complemental strand, 15972932 - 15972876
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    |||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||    
T  15972932 cgacaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgt 15972876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 409
Target Start/End: Complemental strand, 18422022 - 18421966
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||    
T  18422022 cgacaccgacacttgtaattacactgaattatgtgatatttttaaattattaattgt 18421966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 405
Target Start/End: Original strand, 30404850 - 30404902
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30404850 cgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaa 30404902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 350 - 409
Target Start/End: Complemental strand, 974809 - 974750
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    ||||||||||||||||||| |||||||||||| ||||||| |||||||||||||| ||||    
T  974809 acacgacaccgacacttgtaattacactgaataatgtgatcttttcaaattattagttgt 974750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 353 - 409
Target Start/End: Original strand, 19536397 - 19536454
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtga-ttttttcaaattattaattgt 409  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||    
T  19536397 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgt 19536454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 351 - 404
Target Start/End: Original strand, 20539672 - 20539725
Alignment:
Q  351 cacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||||| |||||||| |||||| |||||||||||||||||||    
T  20539672 cacgacaccgacacttgtaattacactaaattatatgattttttcaaattatta 20539725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 353 - 443
Target Start/End: Complemental strand, 37559036 - 37558938
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaatt--------gtatcagtgtccgtgtccgtatccatgcttcatagg 443  Q
    |||||||||||||||| |||||| ||||||||||||||||| ||||||||||  |        || ||||||||||||||||||||| |||||||||||    
T  37559036 cgacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatccgtgcttcatagg 37558938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 354 - 414
Target Start/End: Original strand, 18841014 - 18841074
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcag 414  Q
    ||||||||||||||| |||||||| |||||||| ||||||||||||||||| |||| ||||    
T  18841014 gacaccgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgtcag 18841074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 348 - 404
Target Start/End: Complemental strand, 33153488 - 33153432
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| |||| ||||    
T  33153488 cgacacgacacggacacttgtaattacactgaattatgtgatttttttaaatcatta 33153432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 11223805 - 11223914
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    |||||||||| ||||||||||||| |  |||| |||| || | ||||||||   | ||| ||||||||||||||| ||||||||||||||||| ||||||    
T  11223805 gacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacacctacatgacaccgacacttgtaattacactgaattatgttattttt 11223903  T
Q  394 tcaaattatta 404  Q
    ||||| |||||    
T  11223904 tcaaaatatta 11223914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 424
Target Start/End: Complemental strand, 44860438 - 44860308
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    ||||||||||| |||||| ||||| | ||||||||||  | | |||||| |   | ||||||||||||||| | | |||||||||||||||| ||||||     
T  44860438 gacactcctcgaattaggtgtgtcccgatgtcggacacatgtcgtgtccaacaccaacacgacaccgacacatataattacactgaattatgcgattttc 44860339  T
Q  394 tcaaattattaattgtatcagtgtccgtgtc 424  Q
    |||||||||||   || ||||||||||||||    
T  44860338 tcaaattattagcggtgtcagtgtccgtgtc 44860308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 4882691 - 4882747
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||| |||||||||| ||||||||||||||| | |||||||||||| ||||    
T  4882691 cgacacgacatcgacacttgtaattacactgaattatatcattttttcaaataatta 4882747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 18420374 - 18420485
Alignment:
Q  295 agacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccga--tcgacacgacaccgacacttgtgattacactgaattatgtgatttt 392  Q
    ||||||| |||||||||||||||||  ||||||| |||  | |  |||||||  | ||||| |||||||||||| | ||| || ||||||||||||||||    
T  18420374 agacacttctcggattaggcgtgtcataatgtcgaacacttgtcatgtccgacatggacacaacaccgacacttataattgcattgaattatgtgatttt 18420473  T
Q  393 ttcaaattatta 404  Q
     |||||||||||    
T  18420474 ctcaaattatta 18420485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 21374706 - 21374750
Alignment:
Q  360 gacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||    
T  21374706 gacacttgtaattacactgaattatgtaattttttcaaattatta 21374750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 409
Target Start/End: Complemental strand, 30335476 - 30335420
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    ||||||||||| |||| |||||||| |||||||| ||||||||||||||||| ||||    
T  30335476 cgacaccgacatttgtaattacactaaattatgtcattttttcaaattattagttgt 30335420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 392
Target Start/End: Original strand, 34784922 - 34785021
Alignment:
Q  295 agacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgatttt 392  Q
    |||||||||||| || ||||||||| |  |||| |||| || | |||||||||  ||||||||||||||||| | | |||||||| ||||||||||||||    
T  34784922 agacactcctcgaataaggcgtgtccccgtgtcagacaggtgtcgtgtccgataccgacacgacaccgacacatataattacactaaattatgtgatttt 34785021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 397
Target Start/End: Complemental strand, 35056986 - 35056883
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    |||||||||| |||||||||||| ||  ||||||||| || | ||||||||   ||||||||||||||||| | | ||||||||||||||| || ||||     
T  35056986 gacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatatggttttc 35056887  T
Q  394 tcaa 397  Q
    ||||    
T  35056886 tcaa 35056883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 38117111 - 38117210
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttc 395  Q
    ||||| |||||||||||||||||| |  ||||||||| || ||||||||||         |||| |||||||| ||||||| ||| ||||||||||||||    
T  38117111 gacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccga---------caccaacacttgtaattacaccgaagtatgtgattttttc 38117201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 359 - 427
Target Start/End: Original strand, 12940941 - 12941011
Alignment:
Q  359 cgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatca--gtgtccgtgtccgt 427  Q
    ||||| |||| ||||||||||||||| ||||||||||||||||||| |||| |||  ||||| ||||||||    
T  12940941 cgacatttgtaattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgt 12941011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 397
Target Start/End: Original strand, 32749818 - 32749869
Alignment:
Q  346 atcgacacgacaccgacacttgtgattacactgaattatgtgattttttcaa 397  Q
    ||||||||||||| ||||||| | ||||||||||||||||||||||| ||||    
T  32749818 atcgacacgacactgacacttattattacactgaattatgtgattttctcaa 32749869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 5040793 - 5040740
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgatt--ttttcaaattatta 404  Q
    |||||||||||||||| |||||| ||||||||||||||  ||||||||||||||    
T  5040793 cgacaccgacacttgtaattacattgaattatgtgattttttttcaaattatta 5040740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 404
Target Start/End: Original strand, 18889592 - 18889642
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||| | ||||||||||||||||||||||||| |||| ||||||    
T  18889592 gacaccgacacatatgattacactgaattatgtgattttctcaatttatta 18889642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 404
Target Start/End: Complemental strand, 28677951 - 28677917
Alignment:
Q  370 attacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||||||||||||||||||||||    
T  28677951 attacactgaattatgtgattttttcaaattatta 28677917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 359 - 404
Target Start/End: Original strand, 10535765 - 10535810
Alignment:
Q  359 cgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||| ||||||||||||||||||| ||||| |||||||||||    
T  10535765 cgacacttatgattacactgaattatgtcattttctcaaattatta 10535810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 14996218 - 14996275
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtga-ttttttcaaattatta 404  Q
    ||||| ||||||||||||||| |||||||| |||||| ||| ||||||||||||||||    
T  14996218 cgacaagacaccgacacttgtaattacactaaattatatgatttttttcaaattatta 14996275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 365 - 442
Target Start/End: Original strand, 29367381 - 29367461
Alignment:
Q  365 ttgtgattacactgaattatgtga-ttttttcaaattattaattgtatc--agtgtccgtgtccgtatccatgcttcatag 442  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||||  |   ||||||||||| |||||||| ||||||||    
T  29367381 ttgtaattacactgaattatgtgatttttttaaaattattaattgtgccggcgtgtccgtgtctgtatccatacttcatag 29367461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 353 - 398
Target Start/End: Original strand, 43586005 - 43586050
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaa 398  Q
    ||||||||||||||||||||||| |||||||||| ||||| |||||    
T  43586005 cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 43586050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 409
Target Start/End: Complemental strand, 5473387 - 5473331
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    |||||||||||| |   ||||||| ||||||||||||||||||||||||||| ||||    
T  5473387 cgacaccgacacataatattacaccgaattatgtgattttttcaaattattatttgt 5473331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 417
Target Start/End: Original strand, 18255980 - 18256044
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgt 417  Q
    |||||||||||||| | |||||| | |||||||||||||||| |||||||||  ||| |||||||    
T  18255980 cgacaccgacacttctaattacattaaattatgtgatttttttaaattattatctgtgtcagtgt 18256044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 409
Target Start/End: Complemental strand, 20473381 - 20473325
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    ||||| |||||||||| ||||||||||||||| ||| ||||| ||||||||| ||||    
T  20473381 cgacatcgacacttgtaattacactgaattatatgagttttttaaattattagttgt 20473325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 404
Target Start/End: Complemental strand, 24894453 - 24894397
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||| ||| |||||| | ||| ||||||||||||||||||||| |||||||||    
T  24894453 cgacacgaaaccaacacttttaattgcactgaattatgtgatttttttaaattatta 24894397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 39323316 - 39323272
Alignment:
Q  360 gacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||| ||||||||||||||||| ||||| |||||||||||    
T  39323316 gacacttgtaattacactgaattatgtaattttgtcaaattatta 39323272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 5367251 - 5367200
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||| | | ||||||||||||||||||||||  |||||||||||    
T  5367251 cgacaccgacacatataattacactgaattatgtgatttcctcaaattatta 5367200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 402
Target Start/End: Original strand, 11308010 - 11308053
Alignment:
Q  359 cgacacttgtgattacactgaattatgtgattttttcaaattat 402  Q
    |||||| | ||||||||||||||||||| |||||||||||||||    
T  11308010 cgacacctatgattacactgaattatgtcattttttcaaattat 11308053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 14450797 - 14450840
Alignment:
Q  355 acaccgacacttgtgattacactgaattatgtgattttttcaaa 398  Q
    |||| |||||||||||||||| |||||||||||||||| |||||    
T  14450797 acactgacacttgtgattacattgaattatgtgattttctcaaa 14450840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 404
Target Start/End: Complemental strand, 18622669 - 18622614
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||| |||| | | ||||||||||||||||||||||| | |||||||||    
T  18622669 gacacgacaccaacacgtataattacactgaattatgtgattttattaaattatta 18622614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 405
Target Start/End: Complemental strand, 28412392 - 28412357
Alignment:
Q  370 attacactgaattatgtgattttttcaaattattaa 405  Q
    ||||||||||||||||||||||| ||||||||||||    
T  28412392 attacactgaattatgtgattttatcaaattattaa 28412357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 404
Target Start/End: Original strand, 29970545 - 29970600
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||| |||||| | ||||||||||||| |||| |||||| |||||||||||    
T  29970545 gacacgacatcgacacatatgattacactgaactatgcgattttctcaaattatta 29970600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 34691805 - 34691856
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||| | | ||||||||||||||| ||||||| |||||||||||    
T  34691805 cgacaccgacacatataattacactgaattatatgattttatcaaattatta 34691856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 34714217 - 34714268
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||| | | ||||||||||||||| ||||||| |||||||||||    
T  34714217 cgacaccgacacatataattacactgaattatatgattttatcaaattatta 34714268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 406
Target Start/End: Complemental strand, 2331834 - 2331800
Alignment:
Q  372 tacactgaattatgtgattttttcaaattattaat 406  Q
    ||||||||||||||||||||| |||||||||||||    
T  2331834 tacactgaattatgtgattttctcaaattattaat 2331800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 404
Target Start/End: Complemental strand, 21616804 - 21616770
Alignment:
Q  370 attacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||||||||| |||||||||||    
T  21616804 attacactgaattatgtgattttctcaaattatta 21616770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 404
Target Start/End: Original strand, 21782835 - 21782869
Alignment:
Q  370 attacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||||||||| |||||||||||    
T  21782835 attacactgaattatgtgattttctcaaattatta 21782869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 405
Target Start/End: Original strand, 29176495 - 29176545
Alignment:
Q  355 acaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    ||||| |||||| | |||||||||||||||||||  |||||||||||||||    
T  29176495 acaccaacacttataattacactgaattatgtgaccttttcaaattattaa 29176545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 404
Target Start/End: Original strand, 42832277 - 42832327
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||| | ||||||||||| ||||| ||||| |||||||||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaattatta 42832327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 394
Target Start/End: Complemental strand, 21624326 - 21624285
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    |||||||||||||||| ||||||||||||||||  |||||||    
T  21624326 cgacaccgacacttgtaattacactgaattatgctatttttt 21624285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 405
Target Start/End: Original strand, 30527590 - 30527647
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    |||||||| |||||||| | | |||||||| |||||| ||||||| ||||||||||||    
T  30527590 cgacacgataccgacacatataattacactaaattatatgattttctcaaattattaa 30527647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 404
Target Start/End: Original strand, 34006993 - 34007042
Alignment:
Q  355 acaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||| | ||||||||||||||||||| | ||| |||||||||||    
T  34006993 acaccgacacctatgattacactgaattatgtcaatttctcaaattatta 34007042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 405
Target Start/End: Complemental strand, 36281729 - 36281692
Alignment:
Q  368 tgattacactgaattatgtgattttttcaaattattaa 405  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  36281729 tgattacactaaattatgtgattttctcaaattattaa 36281692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 404
Target Start/End: Original strand, 44605141 - 44605190
Alignment:
Q  355 acaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||| ||| |||||| |||||||||| ||||| |||||||||||    
T  44605141 acaccgacacatgtaattacattgaattatgttattttctcaaattatta 44605190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 390
Target Start/End: Complemental strand, 44635557 - 44635520
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgatt 390  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  44635557 cgacaccgacacttgtaattacactgaattacgtgatt 44635520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 404
Target Start/End: Complemental strand, 23718082 - 23718034
Alignment:
Q  356 caccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||| | | ||||||||||||||||||| ||| |||||||||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaattatta 23718034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 404
Target Start/End: Complemental strand, 24105754 - 24105706
Alignment:
Q  356 caccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||| | | ||||||||||||||||||| ||| |||||||||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaattatta 24105706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 402
Target Start/End: Original strand, 36409644 - 36409676
Alignment:
Q  370 attacactgaattatgtgattttttcaaattat 402  Q
    |||||||| ||||||||||||||||||||||||    
T  36409644 attacactaaattatgtgattttttcaaattat 36409676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 353 - 409
Target Start/End: Complemental strand, 38442366 - 38442310
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    |||||||||||||| | |||| | |||||||||||||||||| |||| |||| ||||    
T  38442366 cgacaccgacacttataattatattgaattatgtgatttttttaaatcattagttgt 38442310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 406
Target Start/End: Original strand, 40361771 - 40361807
Alignment:
Q  370 attacactgaattatgtgattttttcaaattattaat 406  Q
    |||||||| |||||||| |||||||||||||||||||    
T  40361771 attacactaaattatgtaattttttcaaattattaat 40361807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 350 - 424
Target Start/End: Complemental strand, 25566903 - 25566829
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgtccgtgtc 424  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||| |||||||| |||||    
T  25566903 acacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagtgtctgtgtc 25566829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 296 - 443
Target Start/End: Original strand, 15816070 - 15816221
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    |||||| ||||||||||||||||| |  |||||||   || | ||||||||   | ||||||||||||||||| | |||||||| |||||||||||||||    
T  15816070 gacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaattatgtgattttt 15816169  T
Q  394 tcaaattattaattgtatc--agtgtccgtgtccgtatccatgcttcatagg 443  Q
    ||||||||||| |||| ||   ||||| |||||||||||||||||| |||||    
T  15816170 tcaaattattagttgtgtcggcgtgtcagtgtccgtatccatgcttaatagg 15816221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 22652094 - 22651984
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    ||||||||||||||||| |||||| |  |||||||||  | | ||||||||   ||||||||||||||||||||| |||| | |||||||||||||||||    
T  22652094 gacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaattatgtgattttt 22651995  T
Q  394 tcaaattatta 404  Q
    |||||||||||    
T  22651994 tcaaattatta 22651984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 404
Target Start/End: Original strand, 2572052 - 2572107
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  2572052 gacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 2572107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 4948711 - 4948660
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4948711 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 4948660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 29510245 - 29510355
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    |||||||||||||||||| ||||| |  ||||||||| |  | ||||||||   |||||| |||||||||||||| |||| |||||||| ||||||||||    
T  29510245 gacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacactacaccgacacttgtaattatactgaattttgtgattttt 29510344  T
Q  394 tcaaattatta 404  Q
    |||||||||||    
T  29510345 tcaaattatta 29510355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 353 - 443
Target Start/End: Original strand, 36450754 - 36450852
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaatt--------gtatcagtgtccgtgtccgtatccatgcttcatagg 443  Q
    ||||||| |||||||| ||||||||||||| ||||||||||||||||||||| ||        || ||||||||||||||||||||| |||||||||||    
T  36450754 cgacacctacacttgtaattacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtccgtatccgtgcttcatagg 36450852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 404
Target Start/End: Complemental strand, 8343032 - 8342980
Alignment:
Q  352 acgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  8343032 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 8342980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 13436959 - 13437015
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  13436959 cgacacgacaccgacacttgttattaccatgaattatgtgattttttcaaattatta 13437015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 20873128 - 20873077
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  20873128 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 20873077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 352 - 404
Target Start/End: Complemental strand, 8343376 - 8343324
Alignment:
Q  352 acgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||| ||||||||| |||||||| ||||||||||||||||||||||||||    
T  8343376 acgacactgacacttgtaattacactaaattatgtgattttttcaaattatta 8343324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 296 - 405
Target Start/End: Original strand, 11927027 - 11927138
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcgga--catgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    ||||||| |||||||||||||||||| |||| |||  |||||  ||| |   | | ||||||||||||||| | | |||||||||||||||||||||||     
T  11927027 gacactcatcggattaggcgtgtctcgatgttggatacatgtcgtgtatgacaccaacacgacaccgacacatataattacactgaattatgtgatttta 11927126  T
Q  394 tcaaattattaa 405  Q
    ||||||||||||    
T  11927127 tcaaattattaa 11927138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 355 - 403
Target Start/End: Complemental strand, 40332248 - 40332200
Alignment:
Q  355 acaccgacacttgtgattacactgaattatgtgattttttcaaattatt 403  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  40332248 acaccgacacttgtaattacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 405
Target Start/End: Original strand, 4298887 - 4298938
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    ||||||||||||||| |||||| | |||||||||||||||||||||||||||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattattaa 4298938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 405
Target Start/End: Complemental strand, 11944782 - 11944672
Alignment:
Q  297 acactcctcggattaggcgtgtctcaatgtcgga--catgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    |||||| ||||||||||||||||||  |||||||  |||||  ||| |   ||| ||||||||||||||| | | |||||||||| |||||||||||| |    
T  11944782 acactcatcggattaggcgtgtctcggtgtcggatacatgtcgtgtatgacatcaacacgacaccgacacatataattacactgagttatgtgattttat 11944683  T
Q  395 caaattattaa 405  Q
    |||||||||||    
T  11944682 caaattattaa 11944672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 30077387 - 30077438
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||||    
T  30077387 cgacacggacacttgtaattacactgaattatgtgatgttttcaaattatta 30077438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 355 - 424
Target Start/End: Complemental strand, 31514930 - 31514860
Alignment:
Q  355 acaccgacacttgtgattacactgaattatgtgatttttt-caaattattaattgtatcagtgtccgtgtc 424  Q
    ||||| ||||||||  |||| ||||||||||||||||||| |||||||||| |||| ||||||||||||||    
T  31514930 acaccaacacttgtagttacgctgaattatgtgatttttttcaaattattagttgtgtcagtgtccgtgtc 31514860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 359 - 405
Target Start/End: Original strand, 41831946 - 41831992
Alignment:
Q  359 cgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||    
T  41831946 cgacacttgtagttacactgaattatgtgattttttcaaattattaa 41831992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 409
Target Start/End: Original strand, 29447105 - 29447166
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    ||||| |||||||||||||||  ||||| |||||||||||||||| ||||||||||| ||||    
T  29447105 cgacatgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagttgt 29447166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 4673365 - 4673476
Alignment:
Q  295 agacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccga--tcgacacgacaccgacacttgtgattacactgaattatgtgatttt 392  Q
    |||||||||| |||||||||||||  |  ||||||| |||  | ||||||||  || ||| ||||| || |||||| ||||||||||||| | |||||||    
T  4673365 agacactccttggattaggcgtgttccggtgtcggatatgcgtcgtgtccgacatcaacaagacactgatacttgtaattacactgaattttatgatttt 4673464  T
Q  393 ttcaaattatta 404  Q
    ||||||||||||    
T  4673465 ttcaaattatta 4673476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 409
Target Start/End: Original strand, 18170482 - 18170538
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    ||||||||||| |||| |||||| |||||||||| ||||||||||||| ||||||||    
T  18170482 cgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgt 18170538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 409
Target Start/End: Original strand, 18634050 - 18634106
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    ||||||||||| |||| |||||| |||||||||| ||||||||||||| ||||||||    
T  18634050 cgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgt 18634106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 405
Target Start/End: Complemental strand, 24669492 - 24669440
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||||||||||    
T  24669492 cgacaccgacacttgtaattacactgaattatgtaatttcctcaaattattaa 24669440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 403
Target Start/End: Original strand, 17468503 - 17468558
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatt 403  Q
    |||||||||||| |||||||| ||||||| | |||||||||||||| |||||||||    
T  17468503 cgacacgacaccaacacttgtaattacaccgcattatgtgatttttacaaattatt 17468558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 404
Target Start/End: Complemental strand, 21465475 - 21465420
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||| |||||||| ||||||  ||||||| |||||||||||||||||||    
T  21465475 gacacgacaccaacacttgtaattacatcgaattatatgattttttcaaattatta 21465420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 22596053 - 22596002
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||| |||||||| ||||||||||||||||| ||||||| |||||||||    
T  22596053 cgacaccaacacttgtaattacactgaattatgttatttttttaaattatta 22596002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 24613579 - 24613529
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  24613579 cgacaccgacacttgtaattacacttaattatgtgat-ttttcaaattatta 24613529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 404
Target Start/End: Original strand, 30271287 - 30271342
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||| | ||||||| ||||||||| |||||||||||||||||||| ||||    
T  30271287 gacacgacactggcacttgtaattacactgcattatgtgattttttcaaatgatta 30271342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 405
Target Start/End: Complemental strand, 31557054 - 31557004
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    |||||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  31557054 gacaccgaaacttgtaattacactgaattatgtgat-ttttcaaattattaa 31557004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 404
Target Start/End: Original strand, 20679396 - 20679446
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||| | ||||||||||| ||||||||||| |||||||||||    
T  20679396 gacaccgacacttataattacactgaactatgtgattttctcaaattatta 20679446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 404
Target Start/End: Original strand, 22197743 - 22197793
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||| ||||||||| |||||||| |||||||||| |||||||||||||||    
T  22197743 gacactgacacttgtaattacactaaattatgtgaatttttcaaattatta 22197793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 394
Target Start/End: Complemental strand, 24858075 - 24858030
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||    
T  24858075 cgacacgacaacgacacttgt-attacactgaattatgtgatttttt 24858030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 353 - 406
Target Start/End: Original strand, 4786338 - 4786391
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaat 406  Q
    |||||||||||| | | ||||||||||||||||||||||| | |||||||||||    
T  4786338 cgacaccgacacatataattacactgaattatgtgattttcttaaattattaat 4786391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 353 - 431
Target Start/End: Complemental strand, 5813651 - 5813571
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatc--agtgtccgtgtccgtatcc 431  Q
    ||||||||||||||||  ||||||| || ||||||| |||||||||||||||  ||| ||   ||||||||||||||||||    
T  5813651 cgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtccgtatcc 5813571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 359 - 404
Target Start/End: Complemental strand, 18407772 - 18407727
Alignment:
Q  359 cgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||| |||||||||||||||||||||||||  ||||||||    
T  18407772 cgacacttgtaattacactgaattatgtgatttttttgaattatta 18407727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 404
Target Start/End: Complemental strand, 28745562 - 28745506
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||| ||||| ||||  ||||| |||||||||||| |||||||||||||||    
T  28745562 cgacacgacatcgacatttgtagttacattgaattatgtgaatttttcaaattatta 28745506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 3025610 - 3025559
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||| ||||| | | ||||||||||||||||||||||| |||||||||||    
T  3025610 cgacactgacacctataattacactgaattatgtgattttctcaaattatta 3025559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 404
Target Start/End: Complemental strand, 5307123 - 5307069
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||||| ||||| || |||||||||| | |||||||||||||||    
T  5307123 gacacgacaccgacacttatgatttcattgaattatgtca-tttttcaaattatta 5307069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 12985451 - 12985400
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||  | |||||||| |||||||||||||||| |||||||||||    
T  12985451 cgacaccgacatatatgattacattgaattatgtgattttctcaaattatta 12985400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 13844596 - 13844647
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||| | | |||||||| |||||||||||||| |||||||||||    
T  13844596 cgacaccgacacatataattacactcaattatgtgattttctcaaattatta 13844647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 402
Target Start/End: Complemental strand, 22493551 - 22493504
Alignment:
Q  355 acaccgacacttgtgattacactgaattatgtgattttttcaaattat 402  Q
    |||||||||  | ||||||||||||||||||||||||||| |||||||    
T  22493551 acaccgacatatatgattacactgaattatgtgattttttaaaattat 22493504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 404
Target Start/End: Original strand, 31548289 - 31548344
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||| ||||||||||| |||||||||| |||||||||| ||||| |||||| ||||    
T  31548289 gacatgacaccgacacatgtgattacattgaattatgtcattttatcaaataatta 31548344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 34897144 - 34897093
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||| |||||| | | ||||||||||||||||||||||| |||||||||||    
T  34897144 cgacatcgacacatataattacactgaattatgtgattttctcaaattatta 34897093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 442
Target Start/End: Original strand, 2572141 - 2572171
Alignment:
Q  412 cagtgtccgtgtccgtatccatgcttcatag 442  Q
    |||||||||||||||||||||||||||||||    
T  2572141 cagtgtccgtgtccgtatccatgcttcatag 2572171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 404
Target Start/End: Complemental strand, 14134741 - 14134707
Alignment:
Q  370 attacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||||||||||| |||||||||||    
T  14134741 attacactgaattatgtgattttctcaaattatta 14134707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 440
Target Start/End: Original strand, 6065674 - 6065746
Alignment:
Q  370 attacactgaattatgtgattttttcaaattattaattgtatcagtgt--ccgtgtccgtatccatgcttcat 440  Q
    |||| |||| |||||||||||||||  ||||||||| |||||| ||||  | |||||||||||| ||||||||    
T  6065674 attatactgtattatgtgattttttagaattattaactgtatcggtgtgccagtgtccgtatccgtgcttcat 6065746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 404
Target Start/End: Complemental strand, 7442902 - 7442853
Alignment:
Q  355 acaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||| |||||||| ||||||||||||||||| ||||| | |||||||||    
T  7442902 acaccaacacttgtaattacactgaattatgtaattttatgaaattatta 7442853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 10002163 - 10002215
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtga-ttttttcaaattatta 404  Q
    |||||||||||| |||||||||| | |||||||| | ||||||||||||||||    
T  10002163 cgacaccgacacatgtgattacattaaattatgtcatttttttcaaattatta 10002215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 424
Target Start/End: Original strand, 16641969 - 16642045
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcagtgtccgtgtc 424  Q
    ||||||||||||||||| | | |  ||||| |||||||||  ||| ||||||||||| |||| |||||||| |||||    
T  16641969 cgacacgacaccgacacatataacgacactaaattatgtgtatttctcaaattattagttgtgtcagtgtctgtgtc 16642045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 405
Target Start/End: Original strand, 16867202 - 16867260
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatg---tgattttttcaaattattaa 405  Q
    ||||||||||||||||| | |||||||| |||||||   | ||||||||||||||||||    
T  16867202 acacgacaccgacacttataattacactaaattatgttattattttttcaaattattaa 16867260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 404
Target Start/End: Complemental strand, 18646216 - 18646180
Alignment:
Q  368 tgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||| |||| |||||||||||||||||    
T  18646216 tgattacactgaatcatgtcattttttcaaattatta 18646180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 24362197 - 24362253
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||  ||||| | | ||||||||||||||||||||| | |||||||||||    
T  24362197 cgacacgacattgacacatataattacactgaattatgtgattctctcaaattatta 24362253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 404
Target Start/End: Original strand, 25192350 - 25192398
Alignment:
Q  356 caccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||| | |||| |||||||||||| | |||||||||||||||    
T  25192350 caccgacacttataattatactgaattatgtcactttttcaaattatta 25192398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 26902174 - 26902214
Alignment:
Q  352 acgacaccgacacttgtgattacactgaattatgtgatttt 392  Q
    ||||||||||||| | | |||||||||||||||||||||||    
T  26902174 acgacaccgacacatataattacactgaattatgtgatttt 26902214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 405
Target Start/End: Original strand, 28384990 - 28385046
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    |||| ||||||||||| | | |||||||||||||||| ||||| |||| ||||||||    
T  28384990 gacatgacaccgacacatataattacactgaattatgagatttattcatattattaa 28385046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 404
Target Start/End: Original strand, 31236580 - 31236628
Alignment:
Q  356 caccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||| | | |||||| |||||||||||||||| |||||||||||    
T  31236580 caccgacacatataattacattgaattatgtgattttctcaaattatta 31236628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 353 - 405
Target Start/End: Original strand, 33405384 - 33405436
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    |||||||||||| | | |||||||| ||||||||| |||| ||||||||||||    
T  33405384 cgacaccgacacatataattacactaaattatgtgtttttctcaaattattaa 33405436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 40063995 - 40063939
Alignment:
Q  368 tgattacactgaattatgtgattttttcaaattattaattgtatcagtgtccgtgtc 424  Q
    |||||||| |||||||||| ||||| ||||||||||| | || || |||||||||||    
T  40063995 tgattacaatgaattatgtcattttctcaaattattattggtgtcggtgtccgtgtc 40063939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 296 - 409
Target Start/End: Original strand, 8576 - 8691
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    ||||||||||| |||||||||||  || ||||||||| || | |||||||||  |||||||||||||||| |||| |||| || |||||||||||| |||    
T  8576 gacactcctcgaattaggcgtgtaccagtgtcggacacgtatcgtgtccgataccgacacgacaccgacatttgtaattataccgaattatgtgatattt 8675  T
Q  394 tcaaattattaattgt 409  Q
    ||||||||||| ||||    
T  8676 tcaaattattagttgt 8691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 339 - 404
Target Start/End: Complemental strand, 20245 - 20180
Alignment:
Q  339 gtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||| | ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  20245 gtgtcccaccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattatta 20180  T

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Target: scaffold0019 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 71843 - 71731
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgatt--t 391  Q
    ||||||||||||||||| |||||| |  ||||||||| || ||||||||||   ||||||||||| |||||| || ||||||||||||| |||||||  |    
T  71843 gacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacactgacactagtaattacactgaattgtgtgattttt 71744  T
Q  392 tttcaaattatta 404  Q
    |||||||||||||    
T  71743 tttcaaattatta 71731  T

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Target: scaffold0361 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 362 - 447
Target Start/End: Complemental strand, 14580 - 14492
Alignment:
Q  362 cacttgtgattacactgaattatgtgattttttcaaattattaattgtatc--agtgtcc-gtgtccgtatccatgcttcataggtttt 447  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||| ||   |||||| |||||||||||| ||||||||| |||||    
T  14580 cacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtccggtgtccgtatccgtgcttcatatgtttt 14492  T

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Target: scaffold0027 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 405
Target Start/End: Complemental strand, 46741 - 46689
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  46741 cgacaccgacatttgtaattacactgaattatgtgattttttcaaattattaa 46689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 405
Target Start/End: Complemental strand, 23832 - 23776
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgatt-ttttcaaattattaa 405  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  23832 acacgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattaa 23776  T

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Target: scaffold0011 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 354 - 414
Target Start/End: Original strand, 17750 - 17810
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgtatcag 414  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||| |||| ||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcag 17810  T

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Target: scaffold0652 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 462 - 513
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  462 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattatta 513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 241712 - 241602
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    |||||| ||||||||||||||||| |  ||||||||| || | ||||||||   | ||||||||||||||||  | |||||||| |||||||||||||||    
T  241712 gacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaattatgtgattttt 241613  T
Q  394 tcaaattatta 404  Q
     ||||||||||    
T  241612 ccaaattatta 241602  T

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Target: scaffold0021 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 356 - 405
Target Start/End: Complemental strand, 130538 - 130489
Alignment:
Q  356 caccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  130538 caccgacacttgtaattacactgaattatgtgattttttcaaactattaa 130489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 442
Target Start/End: Complemental strand, 130454 - 130426
Alignment:
Q  414 gtgtccgtgtccgtatccatgcttcatag 442  Q
    |||||||||||||||||||||||||||||    
T  130454 gtgtccgtgtccgtatccatgcttcatag 130426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 296 - 394
Target Start/End: Original strand, 4833 - 4924
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    |||||||||||||||||||||||| |  |||||||||||| | ||||       ||| |||||| |||||||| |||||||||||||||||||||||||    
T  4833 gacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt-------acaagacaccaacacttgtaattacactgaattatgtgatttttt 4924  T

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Target: scaffold0050 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 353 - 405
Target Start/End: Complemental strand, 70337 - 70285
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    |||||||||||||| | ||||||||||||||||| ||||||||||||||||||    
T  70337 cgacaccgacacttataattacactgaattatgttattttttcaaattattaa 70285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 404
Target Start/End: Complemental strand, 51862 - 51819
Alignment:
Q  361 acacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  51862 acacttgtaattacactgaattatgtgattttttcaaattatta 51819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 403
Target Start/End: Complemental strand, 53244 - 53189
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatt 403  Q
    ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||||    
T  53244 cgacacggcaccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 263313 - 263423
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    |||||||||||||||||||||||||   | ||| ||| || | ||||| ||   ||||||||||| ||||||| | |||||||||||||||||| ||||     
T  263313 gacactcctcggattaggcgtgtcttggtatcgaacacgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaattatgtggttttc 263412  T
Q  394 tcaaattatta 404  Q
    |||||||||||    
T  263413 tcaaattatta 263423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 394
Target Start/End: Complemental strand, 23484 - 23438
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||    
T  23484 cgacacgacaccgacacttataattacactgaattatgtgatttttt 23438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 394
Target Start/End: Complemental strand, 23571 - 23529
Alignment:
Q  352 acgacaccgacacttgtgattacactgaattatgtgatttttt 394  Q
    ||||||| ||||||| | |||||||||||||||||||||||||    
T  23571 acgacactgacacttataattacactgaattatgtgatttttt 23529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 409
Target Start/End: Original strand, 178813 - 178875
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatg-tgattttttcaaattattaattgt 409  Q
    ||||| ||||| ||||||||| |||||||||||||||| ||||||||||||||||||| ||||    
T  178813 cgacatgacactgacacttgtaattacactgaattatgatgattttttcaaattattagttgt 178875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 405
Target Start/End: Original strand, 192256 - 192301
Alignment:
Q  360 gacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    ||||||||| ||||||| ||||||||| ||||| ||||||||||||    
T  192256 gacacttgtaattacaccgaattatgtaattttctcaaattattaa 192301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 296 - 394
Target Start/End: Complemental strand, 3046 - 2946
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    |||||||||||||||||||||||  |  ||||| ||| || | ||||| |||  ||||||||||| || |||||| |||||||| |||||||||||||||    
T  3046 gacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacacgacactgatacttgtaattacactaaattatgtgattttt 2947  T
Q  394 t 394  Q
    |    
T  2946 t 2946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 409
Target Start/End: Complemental strand, 13459 - 13403
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    |||||||||| ||||| ||| ||||||||||||||||||| ||||||||||| ||||    
T  13459 cgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgt 13403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 409
Target Start/End: Original strand, 21868 - 21924
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    |||||||||| ||||| ||| ||||||||||||||||||| ||||||||||| ||||    
T  21868 cgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgt 21924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 4987 - 5038
Alignment:
Q  295 agacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccga 346  Q
    |||||||||||||||||||| ||||||||||||||||| || | ||||||||    
T  4987 agacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccga 5038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 412
Target Start/End: Complemental strand, 19626 - 19576
Alignment:
Q  361 acacttgtgattacactgaattatgtgattttttcaaattattaattgtatc 412  Q
    |||||||| |||||||||||||||||||| |||||||||||||| |||||||    
T  19626 acacttgtaattacactgaattatgtgat-ttttcaaattattagttgtatc 19576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 405
Target Start/End: Original strand, 25765 - 25820
Alignment:
Q  350 acacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    ||||||||||||||||| | |||||||| |||||||||||||| || |||||||||    
T  25765 acacgacaccgacacttataattacactaaattatgtgattttctctaattattaa 25820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 8857 - 8806
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||| |||||||| ||| || |||||||||||||||||||    
T  8857 cgacaccgacacttgtaattacactaaataatatgattttttcaaattatta 8806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 8770 - 8739
Alignment:
Q  414 gtgtccgtgtccgtatccatgcttcataggtt 445  Q
    ||||||||||||||||||||||||||||||||    
T  8770 gtgtccgtgtccgtatccatgcttcataggtt 8739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 9688 - 9798
Alignment:
Q  296 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 393  Q
    ||||||||||||||||  |||||| | ||||| |||| || | ||||| ||   | ||||||||||||||| | | |||||||||||||| ||||||||     
T  9688 gacactcctcggattatacgtgtcccgatgtcagacaagtgtcgtgtctgacaccaacacgacaccgacacatataattacactgaattaagtgattttc 9787  T
Q  394 tcaaattatta 404  Q
    |||||||||||    
T  9788 tcaaattatta 9798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 404
Target Start/End: Original strand, 135308 - 135363
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||| | | ||||||| ||||||||||||||| |||||||||||    
T  135308 gacacgacaccgacacatataattacacagaattatgtgattttctcaaattatta 135363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 402
Target Start/End: Complemental strand, 56986 - 56932
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattat 402  Q
    ||||||||||| ||||||| ||||||||||||||||| | ||||| |||||||||    
T  56986 cgacacgacactgacacttatgattacactgaattatatcattttctcaaattat 56932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 404
Target Start/End: Complemental strand, 63831 - 63781
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||||||||||| ||| ||||||||||||| ||||| |||||||||||    
T  63831 gacaccgacacttgtaattgcactgaattatgtaattttctcaaattatta 63781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000007; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 442
Target Start/End: Complemental strand, 92859 - 92775
Alignment:
Q  360 gacacttgtgattacactgaattatgtgattttttcaaattattaattgtatc--agtgtccgtgtccgtatccatgcttcatag 442  Q
    ||||||||| ||||||||||||||||| ||||| |||||||||||   || ||   ||||| |||||||||||| ||||||||||    
T  92859 gacacttgtaattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtccgtatccgtgcttcatag 92775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 400
Target Start/End: Complemental strand, 83220 - 83172
Alignment:
Q  352 acgacaccgacacttgtgattacactgaattatgtgattttttcaaatt 400  Q
    |||||||||||| |||| ||||||||||||||||| ||||||| |||||    
T  83220 acgacaccgacatttgtaattacactgaattatgtcatttttttaaatt 83172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 390
Target Start/End: Complemental strand, 123686 - 123650
Alignment:
Q  354 gacaccgacacttgtgattacactgaattatgtgatt 390  Q
    ||||||||||||||| |||||||||||||||||||||    
T  123686 gacaccgacacttgtaattacactgaattatgtgatt 123650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 400
Target Start/End: Original strand, 44520 - 44572
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaatt 400  Q
    |||||||| |||||||| | | ||||||||||||||||||||||| |||||||    
T  44520 cgacacgataccgacacatataattacactgaattatgtgattttctcaaatt 44572  T

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Target: scaffold0122 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 409
Target Start/End: Complemental strand, 8068 - 8013
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaattgt 409  Q
    |||||||||||||| | ||||||||| ||||| ||||||||||||||||||| ||||    
T  8068 cgacaccgacactt-taattacactgtattatatgattttttcaaattattagttgt 8013  T

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Target: scaffold0722 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 7032 - 7083
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    ||||||| |||||||| |||| ||| |||||||| |||||||||||||||||    
T  7032 cgacacctacacttgtaattatactaaattatgtaattttttcaaattatta 7083  T

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Target: scaffold0066 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 404
Target Start/End: Original strand, 33375 - 33414
Alignment:
Q  365 ttgtgattacactgaattatgtgattttttcaaattatta 404  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  33375 ttgtaattacactgaattatgttattttttcaaattatta 33414  T

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Target: scaffold0314 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0314
Description:

Target: scaffold0314; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 398
Target Start/End: Complemental strand, 9012 - 8962
Alignment:
Q  348 cgacacgacaccgacacttgtgattacactgaattatgtgattttttcaaa 398  Q
    ||||| |||||||||||||||||||||  |||||||||| ||||| |||||    
T  9012 cgacatgacaccgacacttgtgattacgttgaattatgtcattttctcaaa 8962  T

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Target: scaffold1528 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 404
Target Start/End: Complemental strand, 1076 - 1043
Alignment:
Q  371 ttacactgaattatgtgattttttcaaattatta 404  Q
    |||||||||||||||| |||||||||||||||||    
T  1076 ttacactgaattatgtaattttttcaaattatta 1043  T

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Target: scaffold0227 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 442
Target Start/End: Original strand, 7319 - 7403
Alignment:
Q  361 acacttgtgattacactgaattatgtgattttttcaaattattaattgtatc--agtgtcc-gtgtccgtatccatgcttcatag 442  Q
    |||||| | |||||||| ||||||||||||||| |||||||||| |||| ||   |||||| ||||| |||||| ||||||||||    
T  7319 acacttataattacactaaattatgtgatttttccaaattattagttgtgtcggcgtgtccggtgtctgtatccgtgcttcatag 7403  T

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Target: scaffold0116 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 447
Target Start/End: Complemental strand, 9870 - 9837
Alignment:
Q  414 gtgtccgtgtccgtatccatgcttcataggtttt 447  Q
    |||||||||||||||||| |||||||||||||||    
T  9870 gtgtccgtgtccgtatccgtgcttcataggtttt 9837  T

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Target: scaffold0083 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 386
Target Start/End: Original strand, 45530 - 45563
Alignment:
Q  353 cgacaccgacacttgtgattacactgaattatgt 386  Q
    |||||||||||||||| |||||||||||||||||    
T  45530 cgacaccgacacttgtaattacactgaattatgt 45563  T

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Target: scaffold0126 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 405
Target Start/End: Complemental strand, 19207 - 19152
Alignment:
Q  349 gacacgacaccgacacttgtgattacactgaattatgtgattttttcaaattattaa 405  Q
    ||||||||||||||| || | || |||||||||||||| ||||||| ||||||||||    
T  19207 gacacgacaccgacatttttaatcacactgaattatgtcatttttt-aaattattaa 19152  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 406
Target Start/End: Complemental strand, 90885 - 90849
Alignment:
Q  370 attacactgaattatgtgattttttcaaattattaat 406  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  90885 attacactgaattatatgattttctcaaattattaat 90849  T

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