View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8030_low_5 (Length: 444)

Name: NF8030_low_5
Description: NF8030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8030_low_5
NF8030_low_5
[»] scaffold1294 (2 HSPs)
scaffold1294 (1-128)||(1914-2042)
scaffold1294 (401-442)||(2039-2080)
[»] chr1 (26 HSPs)
chr1 (9-306)||(28453621-28453922)
chr1 (389-440)||(29215056-29215107)
chr1 (388-442)||(38281618-38281672)
chr1 (390-442)||(23037293-23037345)
chr1 (398-442)||(32786708-32786752)
chr1 (396-442)||(1577112-1577158)
chr1 (388-442)||(1899602-1899656)
chr1 (388-442)||(2266341-2266395)
chr1 (388-442)||(2833911-2833965)
chr1 (388-442)||(22428108-22428162)
chr1 (328-373)||(5973085-5973128)
chr1 (328-373)||(19171207-19171250)
chr1 (396-442)||(25449357-25449403)
chr1 (401-442)||(12625318-12625359)
chr1 (18-59)||(13013644-13013685)
chr1 (340-373)||(19037173-19037206)
chr1 (340-373)||(22018521-22018554)
chr1 (340-373)||(51657285-51657318)
chr1 (340-372)||(7308994-7309026)
chr1 (341-373)||(12740483-12740515)
chr1 (340-372)||(17025844-17025876)
chr1 (340-372)||(22153029-22153061)
chr1 (406-442)||(22153099-22153135)
chr1 (340-372)||(23975682-23975714)
chr1 (340-372)||(30892268-30892300)
chr1 (340-372)||(32786782-32786814)
[»] chr5 (26 HSPs)
chr5 (119-289)||(27984558-27984728)
chr5 (391-442)||(30742197-30742248)
chr5 (388-442)||(7746524-7746578)
chr5 (388-442)||(21100578-21100632)
chr5 (390-442)||(23880269-23880321)
chr5 (388-443)||(9399440-9399495)
chr5 (388-442)||(6498569-6498623)
chr5 (396-442)||(13736934-13736980)
chr5 (388-442)||(33021914-33021968)
chr5 (389-442)||(13546355-13546408)
chr5 (388-442)||(12353691-12353745)
chr5 (388-442)||(21076011-21076065)
chr5 (388-442)||(31117130-31117184)
chr5 (328-373)||(37395360-37395403)
chr5 (340-373)||(3246362-3246395)
chr5 (340-373)||(13533184-13533217)
chr5 (340-373)||(17456629-17456662)
chr5 (328-372)||(19642724-19642766)
chr5 (340-373)||(21702441-21702474)
chr5 (340-373)||(23477579-23477612)
chr5 (340-373)||(40033682-40033715)
chr5 (340-372)||(21199913-21199945)
chr5 (340-372)||(27276619-27276651)
chr5 (340-372)||(31487411-31487443)
chr5 (340-372)||(33021853-33021885)
chr5 (340-372)||(42242819-42242851)
[»] chr8 (30 HSPs)
chr8 (200-278)||(11096639-11096717)
chr8 (201-287)||(4111209-4111295)
chr8 (388-442)||(16206481-16206535)
chr8 (388-442)||(31445352-31445406)
chr8 (388-442)||(45539331-45539385)
chr8 (389-442)||(9319823-9319876)
chr8 (388-442)||(17796667-17796721)
chr8 (388-442)||(30422277-30422331)
chr8 (323-372)||(43773301-43773348)
chr8 (389-442)||(23185593-23185646)
chr8 (389-442)||(35028324-35028377)
chr8 (388-440)||(17007560-17007612)
chr8 (388-440)||(17541338-17541390)
chr8 (340-374)||(17007508-17007542)
chr8 (396-442)||(17442694-17442740)
chr8 (388-442)||(23264474-23264528)
chr8 (396-441)||(18121980-18122025)
chr8 (328-372)||(18565164-18565206)
chr8 (401-442)||(19706774-19706815)
chr8 (397-442)||(21932135-21932180)
chr8 (340-373)||(40213991-40214024)
chr8 (340-373)||(45539404-45539437)
chr8 (340-372)||(1210621-1210653)
chr8 (341-373)||(9340566-9340598)
chr8 (340-372)||(13431539-13431571)
chr8 (388-440)||(16682102-16682154)
chr8 (340-372)||(17287084-17287116)
chr8 (340-372)||(17541410-17541442)
chr8 (340-372)||(18676855-18676887)
chr8 (341-373)||(40002384-40002416)
[»] chr7 (50 HSPs)
chr7 (388-442)||(13473336-13473390)
chr7 (388-442)||(2499283-2499337)
chr7 (388-442)||(4493799-4493853)
chr7 (388-442)||(13034702-13034756)
chr7 (388-442)||(15467170-15467224)
chr7 (388-442)||(16546186-16546240)
chr7 (388-442)||(16619422-16619476)
chr7 (388-442)||(21691679-21691733)
chr7 (396-442)||(4820748-4820794)
chr7 (396-442)||(13879406-13879452)
chr7 (388-442)||(21284223-21284277)
chr7 (388-442)||(28623202-28623256)
chr7 (397-442)||(9710683-9710728)
chr7 (396-440)||(16155591-16155635)
chr7 (388-440)||(35954762-35954814)
chr7 (390-442)||(41843271-41843323)
chr7 (399-442)||(4832173-4832216)
chr7 (326-372)||(10884093-10884137)
chr7 (388-435)||(16557466-16557513)
chr7 (388-435)||(16608149-16608196)
chr7 (391-442)||(19328859-19328910)
chr7 (396-442)||(11792133-11792179)
chr7 (388-442)||(13027800-13027854)
chr7 (396-442)||(13138774-13138820)
chr7 (396-442)||(14186949-14186995)
chr7 (396-442)||(16310804-16310850)
chr7 (327-372)||(21382351-21382394)
chr7 (340-373)||(1559965-1559998)
chr7 (340-373)||(4433462-4433495)
chr7 (340-373)||(6045152-6045185)
chr7 (340-373)||(13259365-13259398)
chr7 (340-373)||(13261597-13261630)
chr7 (397-442)||(14424571-14424616)
chr7 (340-373)||(14746541-14746574)
chr7 (390-442)||(15087809-15087862)
chr7 (340-373)||(18440592-18440625)
chr7 (340-373)||(21284296-21284329)
chr7 (397-442)||(23280824-23280869)
chr7 (340-373)||(24883265-24883298)
chr7 (328-372)||(33604097-33604139)
chr7 (397-442)||(33692571-33692616)
chr7 (390-439)||(48237687-48237736)
chr7 (340-372)||(4493747-4493779)
chr7 (340-372)||(11792073-11792105)
chr7 (388-440)||(13302116-13302168)
chr7 (388-440)||(16315388-16315440)
chr7 (390-442)||(16317445-16317497)
chr7 (340-372)||(16557533-16557565)
chr7 (340-372)||(16608097-16608129)
chr7 (340-372)||(48806806-48806838)
[»] chr2 (32 HSPs)
chr2 (388-442)||(25188657-25188711)
chr2 (396-442)||(22188898-22188944)
chr2 (388-442)||(24851463-24851517)
chr2 (397-438)||(22316857-22316898)
chr2 (388-440)||(6574957-6575009)
chr2 (388-438)||(13964778-13964828)
chr2 (388-442)||(22455750-22455804)
chr2 (388-442)||(28702015-28702069)
chr2 (388-442)||(39038431-39038485)
chr2 (396-437)||(20152790-20152831)
chr2 (390-442)||(6391923-6391975)
chr2 (396-442)||(23234216-23234262)
chr2 (388-442)||(28712497-28712551)
chr2 (340-374)||(31328836-31328870)
chr2 (340-374)||(31335557-31335591)
chr2 (388-442)||(38780651-38780705)
chr2 (388-442)||(40780564-40780618)
chr2 (388-442)||(45087788-45087842)
chr2 (340-373)||(1041536-1041569)
chr2 (328-372)||(22797602-22797644)
chr2 (340-373)||(24450315-24450348)
chr2 (340-373)||(28702088-28702121)
chr2 (340-373)||(28732712-28732745)
chr2 (340-373)||(45087861-45087894)
chr2 (340-372)||(6391869-6391901)
chr2 (340-372)||(19539655-19539687)
chr2 (340-372)||(20569614-20569646)
chr2 (390-442)||(21537978-21538030)
chr2 (406-442)||(23185123-23185159)
chr2 (406-442)||(23596386-23596422)
chr2 (340-372)||(28551785-28551817)
chr2 (341-373)||(29243610-29243642)
[»] scaffold0315 (1 HSPs)
scaffold0315 (388-438)||(7926-7976)
[»] chr6 (33 HSPs)
chr6 (388-442)||(10631392-10631446)
chr6 (388-442)||(13435140-13435194)
chr6 (396-442)||(32543526-32543572)
chr6 (389-442)||(20731546-20731599)
chr6 (398-442)||(18434775-18434819)
chr6 (388-440)||(24717659-24717711)
chr6 (396-442)||(9717089-9717135)
chr6 (388-442)||(17380818-17380872)
chr6 (396-442)||(19687996-19688042)
chr6 (388-442)||(21234411-21234465)
chr6 (388-442)||(21624347-21624401)
chr6 (327-373)||(12352929-12352973)
chr6 (388-442)||(20113473-20113528)
chr6 (399-442)||(22801409-22801452)
chr6 (388-442)||(14101284-14101338)
chr6 (388-442)||(15532470-15532524)
chr6 (396-442)||(19833829-19833875)
chr6 (388-434)||(19952434-19952480)
chr6 (340-373)||(7752040-7752073)
chr6 (340-373)||(16124335-16124368)
chr6 (340-373)||(19453469-19453502)
chr6 (401-442)||(19469897-19469938)
chr6 (340-373)||(19833901-19833934)
chr6 (340-373)||(28252365-28252398)
chr6 (340-373)||(32756764-32756797)
chr6 (340-373)||(33866506-33866539)
chr6 (388-440)||(12716288-12716340)
chr6 (388-440)||(13601422-13601474)
chr6 (341-373)||(14757585-14757617)
chr6 (340-372)||(15301421-15301453)
chr6 (340-372)||(15551243-15551275)
chr6 (406-442)||(16333002-16333038)
chr6 (341-373)||(27167240-27167272)
[»] chr4 (36 HSPs)
chr4 (388-442)||(17246863-17246917)
chr4 (388-442)||(24628699-24628753)
chr4 (388-442)||(29120621-29120675)
chr4 (388-442)||(55379565-55379619)
chr4 (388-442)||(56033781-56033835)
chr4 (141-236)||(20843443-20843539)
chr4 (388-442)||(10071757-10071811)
chr4 (388-442)||(14905127-14905181)
chr4 (388-442)||(19883946-19884000)
chr4 (388-442)||(22676362-22676416)
chr4 (388-442)||(23749779-23749833)
chr4 (388-442)||(54679114-54679168)
chr4 (397-442)||(13576950-13576995)
chr4 (388-440)||(12600008-12600060)
chr4 (390-442)||(44397464-44397516)
chr4 (327-373)||(11514456-11514500)
chr4 (388-442)||(14605707-14605762)
chr4 (327-373)||(19570437-19570481)
chr4 (388-442)||(3792586-3792640)
chr4 (396-442)||(15134980-15135026)
chr4 (396-442)||(37436332-37436378)
chr4 (340-373)||(5872804-5872837)
chr4 (340-373)||(14836898-14836931)
chr4 (328-372)||(19611248-19611290)
chr4 (329-373)||(25656554-25656596)
chr4 (340-373)||(31267586-31267619)
chr4 (340-373)||(33377571-33377604)
chr4 (340-373)||(54679062-54679095)
chr4 (340-372)||(3500529-3500561)
chr4 (341-373)||(4947771-4947803)
chr4 (340-372)||(6640893-6640925)
chr4 (340-372)||(13026991-13027023)
chr4 (340-372)||(15134920-15134952)
chr4 (342-374)||(15560473-15560505)
chr4 (341-373)||(18078702-18078734)
chr4 (340-372)||(40859908-40859940)
[»] chr3 (41 HSPs)
chr3 (388-442)||(6089985-6090039)
chr3 (388-442)||(14968626-14968680)
chr3 (396-442)||(25399101-25399147)
chr3 (388-442)||(29952283-29952337)
chr3 (388-442)||(30001437-30001491)
chr3 (388-442)||(38178491-38178545)
chr3 (388-442)||(40799147-40799201)
chr3 (388-442)||(47206920-47206974)
chr3 (388-442)||(52283052-52283106)
chr3 (388-442)||(1241921-1241975)
chr3 (388-442)||(11222053-11222107)
chr3 (388-442)||(11222805-11222859)
chr3 (388-442)||(12727082-12727136)
chr3 (388-442)||(14954667-14954721)
chr3 (388-442)||(19885924-19885978)
chr3 (388-442)||(20628308-20628362)
chr3 (396-442)||(24776358-24776404)
chr3 (388-442)||(49554356-49554410)
chr3 (401-442)||(19250236-19250277)
chr3 (388-440)||(13823327-13823379)
chr3 (390-442)||(53057571-53057623)
chr3 (323-373)||(19888144-19888192)
chr3 (388-442)||(2560442-2560496)
chr3 (396-442)||(18122494-18122540)
chr3 (396-442)||(22804867-22804913)
chr3 (340-373)||(2025301-2025334)
chr3 (340-373)||(2560390-2560423)
chr3 (340-373)||(4433172-4433205)
chr3 (329-373)||(13601636-13601678)
chr3 (340-373)||(15663528-15663561)
chr3 (340-373)||(16076340-16076373)
chr3 (340-373)||(17910796-17910829)
chr3 (340-373)||(17960813-17960846)
chr3 (340-373)||(21735584-21735617)
chr3 (340-373)||(22150412-22150445)
chr3 (340-373)||(24707348-24707381)
chr3 (340-373)||(28165388-28165421)
chr3 (340-372)||(3237899-3237931)
chr3 (340-372)||(14954615-14954647)
chr3 (388-444)||(19889783-19889839)
chr3 (340-372)||(21639201-21639233)
[»] scaffold0859 (1 HSPs)
scaffold0859 (388-442)||(2226-2280)
[»] scaffold0479 (1 HSPs)
scaffold0479 (388-442)||(9223-9277)
[»] scaffold0439 (1 HSPs)
scaffold0439 (396-442)||(7509-7555)
[»] scaffold0359 (1 HSPs)
scaffold0359 (388-442)||(6524-6578)
[»] scaffold0290 (1 HSPs)
scaffold0290 (396-442)||(19454-19500)
[»] scaffold0251 (1 HSPs)
scaffold0251 (397-443)||(7096-7142)
[»] scaffold0210 (1 HSPs)
scaffold0210 (388-442)||(878-932)
[»] scaffold0163 (1 HSPs)
scaffold0163 (388-442)||(25685-25739)
[»] scaffold0036 (1 HSPs)
scaffold0036 (388-442)||(111400-111454)
[»] scaffold0028 (2 HSPs)
scaffold0028 (396-442)||(24576-24622)
scaffold0028 (341-373)||(13974-14006)
[»] scaffold0023 (1 HSPs)
scaffold0023 (388-442)||(102812-102866)
[»] scaffold0022 (3 HSPs)
scaffold0022 (388-442)||(158403-158457)
scaffold0022 (340-372)||(36634-36666)
scaffold0022 (340-372)||(134694-134726)
[»] scaffold0009 (1 HSPs)
scaffold0009 (397-442)||(83627-83672)
[»] scaffold0004 (2 HSPs)
scaffold0004 (388-440)||(219496-219547)
scaffold0004 (396-440)||(378353-378397)
[»] scaffold0005 (1 HSPs)
scaffold0005 (388-442)||(211616-211671)
[»] scaffold0205 (2 HSPs)
scaffold0205 (388-442)||(752-806)
scaffold0205 (340-372)||(826-858)
[»] scaffold0115 (1 HSPs)
scaffold0115 (388-442)||(17588-17642)
[»] scaffold0043 (1 HSPs)
scaffold0043 (396-442)||(79159-79205)
[»] scaffold0007 (2 HSPs)
scaffold0007 (396-442)||(59902-59948)
scaffold0007 (340-374)||(63540-63574)
[»] scaffold1359 (1 HSPs)
scaffold1359 (397-442)||(6-51)
[»] scaffold0752 (1 HSPs)
scaffold0752 (340-373)||(622-655)
[»] scaffold0391 (1 HSPs)
scaffold0391 (340-373)||(3050-3083)
[»] scaffold0267 (1 HSPs)
scaffold0267 (340-373)||(7187-7220)
[»] scaffold0217 (1 HSPs)
scaffold0217 (397-442)||(729-774)
[»] scaffold0116 (1 HSPs)
scaffold0116 (340-373)||(21808-21841)
[»] scaffold0113 (1 HSPs)
scaffold0113 (341-374)||(2403-2436)
[»] scaffold0081 (1 HSPs)
scaffold0081 (401-442)||(13262-13303)
[»] scaffold0068 (1 HSPs)
scaffold0068 (340-373)||(11436-11469)
[»] scaffold0047 (1 HSPs)
scaffold0047 (340-373)||(33732-33765)
[»] scaffold0038 (1 HSPs)
scaffold0038 (340-373)||(52565-52598)
[»] scaffold0002 (2 HSPs)
scaffold0002 (340-373)||(476164-476197)
scaffold0002 (340-373)||(482684-482717)
[»] scaffold0530 (1 HSPs)
scaffold0530 (388-440)||(2816-2868)
[»] scaffold0488 (1 HSPs)
scaffold0488 (340-372)||(11404-11436)
[»] scaffold0471 (1 HSPs)
scaffold0471 (340-372)||(2659-2691)
[»] scaffold0364 (1 HSPs)
scaffold0364 (340-372)||(5378-5410)
[»] scaffold0311 (1 HSPs)
scaffold0311 (340-372)||(19328-19360)
[»] scaffold0084 (1 HSPs)
scaffold0084 (340-372)||(31794-31826)
[»] scaffold0045 (1 HSPs)
scaffold0045 (340-372)||(88473-88505)


Alignment Details
Target: scaffold1294 (Bit Score: 105; Significance: 3e-52; HSPs: 2)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 1914 - 2042
Alignment:
Q  1 cagttttcgatttggtgtggcataagaatgttcctttgaaggtctcattgtttgtgtggcggttcttcaaaaaaggctgcctactaaagattatttt-gt 99  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  1914 cagtttccgatttggtgtagcataagaatgttcctttgaaggtctcattgtttgtgtggcggttcttcaaaaaaggctgcctactaaagattattttggt 2013  T
Q  100 caggcggggtaaatcggccgaagatcact 128  Q
    |||||||||||| |||||| |||||||||    
T  2014 caggcggggtaattcggccaaagatcact 2042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1294; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 401 - 442
Target Start/End: Original strand, 2039 - 2080
Alignment:
Q  401 cactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||| |||||||||||||| ||||||||||||||||||||||    
T  2039 cactgatcagaagcagatagagttccacttctgaagtgatgt 2080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 306
Target Start/End: Complemental strand, 28453922 - 28453621
Alignment:
Q  9 gatttggtgtggcataagaatgttcctttgaaggtctcattgtttgtgtggcggtt-cttcaaaaaaggctgcctactaaagattattttgtcag--gcg 105  Q
    ||||||||||||||||||   |||| | ||||||||||| |||||||||| ||||| |||||||| ||| ||||| |||||||| ||||  | ||  |||    
T  28453922 gatttggtgtggcataagggcgttcttatgaaggtctcagtgtttgtgtgacggttacttcaaaataggttgcctgctaaagataatttgcttagatgcg 28453823  T
Q  106 gggtaaatc-ggccgaagatcacttttgtgtagcaggttgtggtgggatgcaatcgaccaatcattttttccttcactccagtttatttggttctctttg 204  Q
    | || | |  ||| |||||||||||||| |||||| ||||| ||| |||| |||   | | |||| | ||| |||| |  ||||||||||| || |||||    
T  28453822 gtgttattttggctgaagatcacttttgcgtagcaagttgttgtgagatggaataatctactcatgtattctttcattgtagtttatttggctcgctttg 28453723  T
Q  205 gtatttggttcgtggtttgttggggttttcttcggtagatcctcactttatttcagaccatttcgatcattatgttatcttgacaggtggtttgaaagcg 304  Q
    ||||||||||| || || ||||||||| |||| |||| | |||| || ||||||  ||||||| |||||||||| |||||||||||| |||| |||||||    
T  28453722 gtatttggttcatgattggttggggttctctttggtaaaccctcgctctatttcgaaccattttgatcattatgctatcttgacagggggttcgaaagcg 28453623  T
Q  305 ag 306  Q
    ||    
T  28453622 ag 28453621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 389 - 440
Target Start/End: Original strand, 29215056 - 29215107
Alignment:
Q  389 ctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgat 440  Q
    |||||| ||||||||| |||||||||||||| ||||||||||||||||||||    
T  29215056 ctaagctgaaaacactgatcagaagcagatagagttccacttctgaagtgat 29215107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 38281618 - 38281672
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| ||||||| |||||||||||| ||||||||||||||||    
T  38281618 cctaagctgaaaacactgatcagaaacagatatagttctacttctgaagtgatgt 38281672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 442
Target Start/End: Complemental strand, 23037345 - 23037293
Alignment:
Q  390 taagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  23037345 taagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 23037293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 442
Target Start/End: Complemental strand, 32786752 - 32786708
Alignment:
Q  398 aaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||    
T  32786752 aaacactgatcagaagcagataaagttccacttctgaagtgatgt 32786708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 1577112 - 1577158
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  1577112 gaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 1577158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 1899602 - 1899656
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| |||||| |||||||||    
T  1899602 cctaagctgaaaacactgatcagaagcagatagagttctacttctaaagtgatgt 1899656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 2266341 - 2266395
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| ||||||| |||||| ||||| ||||||||||||||||    
T  2266341 cctaagctgaaaacactgatcagaatcagatagagttctacttctgaagtgatgt 2266395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 2833911 - 2833965
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| || || ||||||||||||||||    
T  2833911 cctaagctgaaaacactgatcagaagcagatagagctctacttctgaagtgatgt 2833965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 22428162 - 22428108
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||| ||||||    
T  22428162 cctaagctgaaaacactgatcagaagcagatagagttctacttctgaaatgatgt 22428108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 5973085 - 5973128
Alignment:
Q  328 tttgaaggtgtaagaaaaacacaagaaggggggatgaattgtgttt 373  Q
    |||||||||||  |||||||||||||||||||| ||||||||||||    
T  5973085 tttgaaggtgt--gaaaaacacaagaaggggggttgaattgtgttt 5973128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 19171250 - 19171207
Alignment:
Q  328 tttgaaggtgtaagaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||  ||||||||||||||||||||| ||||||||||||    
T  19171250 tttgaaggtg--agaaaaacacaagaaggggggttgaattgtgttt 19171207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 25449403 - 25449357
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||||| |||||||||||||| ||||  ||||||||||||||||    
T  25449403 gaaaacactgatcagaagcagatagagttatacttctgaagtgatgt 25449357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 442
Target Start/End: Complemental strand, 12625359 - 12625318
Alignment:
Q  401 cactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||| |||||||||||||| ||||| ||||||||||||||||    
T  12625359 cactcatcagaagcagatagagttcaacttctgaagtgatgt 12625318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 13013685 - 13013644
Alignment:
Q  18 tggcataagaatgttcctttgaaggtctcattgtttgtgtgg 59  Q
    |||| ||||||||||||||||||||||||| | |||||||||    
T  13013685 tggcttaagaatgttcctttgaaggtctcaatttttgtgtgg 13013644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 19037173 - 19037206
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  19037173 agaaaaacacaagaaggggggttgaattgtgttt 19037206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 22018521 - 22018554
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  22018521 agaaaaacacaagaagggggggtgaattgtgttt 22018554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 51657318 - 51657285
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  51657318 agaaaaacacaagaaggggggttgaattgtgttt 51657285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 7308994 - 7309026
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  7308994 agaaaaacacaagaaggggggttgaattgtgtt 7309026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Original strand, 12740483 - 12740515
Alignment:
Q  341 gaaaaacacaagaaggggggatgaattgtgttt 373  Q
    |||||||||||||||||||| ||||||||||||    
T  12740483 gaaaaacacaagaaggggggttgaattgtgttt 12740515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Complemental strand, 17025876 - 17025844
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  17025876 agaaaaacacaagaaggggggttgaattgtgtt 17025844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 22153029 - 22153061
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  22153029 agaaaaacacaagaaggggggttgaattgtgtt 22153061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 406 - 442
Target Start/End: Original strand, 22153099 - 22153135
Alignment:
Q  406 atcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  22153099 atcagaagcagatagagttctacttctgaagtgatgt 22153135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Complemental strand, 23975714 - 23975682
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  23975714 agaaaaacacaagaaggggggttgaattgtgtt 23975682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 30892268 - 30892300
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  30892268 agaaaaacacaagaaggggggttgaattgtgtt 30892300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Complemental strand, 32786814 - 32786782
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  32786814 agaaaaacacaagaaggggggttgaattgtgtt 32786782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 8e-25; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 119 - 289
Target Start/End: Complemental strand, 27984728 - 27984558
Alignment:
Q  119 gaagatcacttttgtgtagcaggttgtggtgggatgcaatcgaccaatcattttttccttcactccagtttatttggttctctttggtatttggttcgtg 218  Q
    |||||||| |||||||||||||||||| ||| |||| |||| | | | ||||| |||||||| |  ||| | |||||||||||||||||| |||||| ||    
T  27984728 gaagatcatttttgtgtagcaggttgtcgtgagatggaatcaatcgaccatttattccttcattgtagtctttttggttctctttggtatatggttcatg 27984629  T
Q  219 gtttgttggggttttcttcggtagatcctcactttatttcagaccatttcgatcattatgttatcttgaca 289  Q
    ||| ||||||||||||||||||| ||||||  ||||| || || || |||  ||| |||||||| ||||||    
T  27984628 gttggttggggttttcttcggtaaatcctcgttttatctcggatcacttcattcagtatgttattttgaca 27984558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 442
Target Start/End: Original strand, 30742197 - 30742248
Alignment:
Q  391 aagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||| ||||||||| |||||||||||||||||||| ||||||||||||||||    
T  30742197 aagctgaaaacactgatcagaagcagatatagttctacttctgaagtgatgt 30742248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 7746578 - 7746524
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  7746578 cctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 7746524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 21100632 - 21100578
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| |||||||||| |||||||||||    
T  21100632 cctaagctgaaaacactgatcagaagcagatagagttccacttttgaagtgatgt 21100578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 442
Target Start/End: Original strand, 23880269 - 23880321
Alignment:
Q  390 taagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  23880269 taagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 23880321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 388 - 443
Target Start/End: Complemental strand, 9399495 - 9399440
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgtc 443  Q
    ||||||| |||||||||||||||||||||||| | ||| | |||||||||||||||    
T  9399495 cctaagctgaaaacactaatcagaagcagatagaattctatttctgaagtgatgtc 9399440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 6498569 - 6498623
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| || ||||||||||| ||||| ||||||||||||||||    
T  6498569 cctaagctgaaaacactgattagaagcagatagagttctacttctgaagtgatgt 6498623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 13736980 - 13736934
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  13736980 gaaaacactgatcagaaacagatagagttccacttctgaagtgatgt 13736934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 33021914 - 33021968
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||| ||||||||||    
T  33021914 cctaagctgaaaacactgatcagaagcagatagagttctacttccgaagtgatgt 33021968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 13546408 - 13546355
Alignment:
Q  389 ctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||| ||||||| | |||||||||||||| ||||| ||||||||||||||||    
T  13546408 ctaagctgaaaacaatgatcagaagcagatagagttctacttctgaagtgatgt 13546355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 12353745 - 12353691
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| |||||| || |||||||||||||| ||||| |||| |||||||||||    
T  12353745 cctaagctgaaaactctgatcagaagcagataaagttctacttatgaagtgatgt 12353691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 21076065 - 21076011
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| || |||||| |||||||||||||  ||||| ||||||||||||||||    
T  21076065 cctaagctgataacactgatcagaagcagattgagttctacttctgaagtgatgt 21076011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 31117130 - 31117184
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||| || |||||| ||||| ||||||||||||||||    
T  31117130 cctaagctgaaaacactgatcaaaaccagatagagttctacttctgaagtgatgt 31117184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 37395360 - 37395403
Alignment:
Q  328 tttgaaggtgtaagaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||  ||||||||||||||||||||| ||||||||||||    
T  37395360 tttgaaggtg--agaaaaacacaagaaggggggttgaattgtgttt 37395403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 3246395 - 3246362
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  3246395 agaaaaacacaagaaggggggttgaattgtgttt 3246362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 13533184 - 13533217
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  13533184 agaaaaacacaagaaggggggttgaattgtgttt 13533217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 17456629 - 17456662
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  17456629 agaaaaacacaagaaggggggttgaattgtgttt 17456662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 372
Target Start/End: Complemental strand, 19642766 - 19642724
Alignment:
Q  328 tttgaaggtgtaagaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||  |||||||||||||||| ||||||||||||||||    
T  19642766 tttgaaggtg--agaaaaacacaagaagaggggatgaattgtgtt 19642724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 21702441 - 21702474
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  21702441 agaaaaacacaagaaggggggttgaattgtgttt 21702474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 23477579 - 23477612
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  23477579 agaaaaacacaagaaggggggttgaattgtgttt 23477612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 40033715 - 40033682
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  40033715 agaaaaacacaagaaggggggttgaattgtgttt 40033682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Complemental strand, 21199945 - 21199913
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  21199945 agaaaaacacaagaaggggggttgaattgtgtt 21199913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Complemental strand, 27276651 - 27276619
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  27276651 agaaaaacacaagaaggggggttgaattgtgtt 27276619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 31487411 - 31487443
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  31487411 agaaaaacacaagaaggggggttgaattgtgtt 31487443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 33021853 - 33021885
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  33021853 agaaaaacacaagaaggggggttgaattgtgtt 33021885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 42242819 - 42242851
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  42242819 agaaaaacacaagaaggggggttgaattgtgtt 42242851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 278
Target Start/End: Original strand, 11096639 - 11096717
Alignment:
Q  200 ctttggtatttggttcgtggtttgttggggttttcttcggtagatcctcactttatttcagaccatttcgatcattatg 278  Q
    |||| ||||||||||||||||| ||||||||| ||||||||||| ||||||  ||||||| || |||||||||||||||    
T  11096639 ctttagtatttggttcgtggttggttggggttctcttcggtagaccctcacaatatttcatacaatttcgatcattatg 11096717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 201 - 287
Target Start/End: Complemental strand, 4111295 - 4111209
Alignment:
Q  201 tttggtatttggttcgtggtttgttggggttttcttcggtagatcctcactttatttcagaccatttcgatcattatgttatcttga 287  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| | |  || |||||| |||||||| |||||||||| ||| ||||    
T  4111295 tttggtatttggttcgtggttggttggggttctcttcggtagaccattgctctatttcggaccattttgatcattatgctatattga 4111209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 16206481 - 16206535
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  16206481 cctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 16206535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 31445352 - 31445406
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  31445352 cctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 31445406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 45539385 - 45539331
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  45539385 cctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 45539331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 9319823 - 9319876
Alignment:
Q  389 ctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  9319823 ctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 9319876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 17796667 - 17796721
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||  ||||||||||||||||    
T  17796667 cctaagctgaaaacactgatcagaagcagatagagttatacttctgaagtgatgt 17796721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 30422331 - 30422277
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||| ||| ||||| ||||||||||||||||    
T  30422331 cctaagctgaaaacactgatcagaagcaaatagagttctacttctgaagtgatgt 30422277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 43773301 - 43773348
Alignment:
Q  323 ttgattttgaaggtgtaagaaaaacacaagaaggggggatgaattgtgtt 372  Q
    |||||||||||||||  ||||||||||||||||||||| |||||||||||    
T  43773301 ttgattttgaaggtg--agaaaaacacaagaaggggggttgaattgtgtt 43773348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 23185646 - 23185593
Alignment:
Q  389 ctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||| ||||||||| |||||||||||||| ||||| |||||||||| |||||    
T  23185646 ctaagctgaaaacactgatcagaagcagatagagttctacttctgaagcgatgt 23185593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 35028377 - 35028324
Alignment:
Q  389 ctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||| ||||||||| ||||||| |||||||||||| |||| |||||||||||    
T  35028377 ctaagctgaaaacactgatcagaaacagatatagttctacttatgaagtgatgt 35028324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 17007560 - 17007612
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgat 440  Q
    ||||||| ||||||||| |||||||||| |||||||||  |||||||||||||    
T  17007560 cctaagctgaaaacactgatcagaagcaaatatagttctgcttctgaagtgat 17007612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 17541390 - 17541338
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgat 440  Q
    ||||||| ||||||||| |||||||||| |||||||||  |||||||||||||    
T  17541390 cctaagctgaaaacactgatcagaagcaaatatagttctgcttctgaagtgat 17541338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 374
Target Start/End: Original strand, 17007508 - 17007542
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtttg 374  Q
    ||||||||||||||||||||| |||||||||||||    
T  17007508 agaaaaacacaagaaggggggttgaattgtgtttg 17007542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 17442740 - 17442694
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||||| |||||||||| ||| ||||| ||||||||||||||||    
T  17442740 gaaaacactgatcagaagcaaatagagttctacttctgaagtgatgt 17442694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 23264528 - 23264474
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||| ||||| | ||| ||||||||||||||||    
T  23264528 cctaagctgaaaacactgatcagaagtagatagaattctacttctgaagtgatgt 23264474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 441
Target Start/End: Complemental strand, 18122025 - 18121980
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatg 441  Q
    ||||||| | |||||||||||||| ||||| |||||||||||||||    
T  18122025 gaaaacattgatcagaagcagatagagttctacttctgaagtgatg 18121980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 18565164 - 18565206
Alignment:
Q  328 tttgaaggtgtaagaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||  ||||||||||||||||||||| |||||||||||    
T  18565164 tttgaaggtg--agaaaaacacaagaaggggggttgaattgtgtt 18565206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 442
Target Start/End: Original strand, 19706774 - 19706815
Alignment:
Q  401 cactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||| |||||||||||||| ||||| ||||||||||||||||    
T  19706774 cactgatcagaagcagatagagttcaacttctgaagtgatgt 19706815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Original strand, 21932135 - 21932180
Alignment:
Q  397 aaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||||| |||||||||||||| || |||||||||||||| ||||    
T  21932135 aaaacactgatcagaagcagatagagatccacttctgaagtaatgt 21932180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 40214024 - 40213991
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  40214024 agaaaaacacaagaaggggggttgaattgtgttt 40213991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 45539437 - 45539404
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  45539437 agaaaaacacaagaaggggggttgaattgtgttt 45539404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Complemental strand, 1210653 - 1210621
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  1210653 agaaaaacacaagaaggggggttgaattgtgtt 1210621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Original strand, 9340566 - 9340598
Alignment:
Q  341 gaaaaacacaagaaggggggatgaattgtgttt 373  Q
    |||||||||||||||||||| ||||||||||||    
T  9340566 gaaaaacacaagaaggggggttgaattgtgttt 9340598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Complemental strand, 13431571 - 13431539
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  13431571 agaaaaacacaagaaggggggttgaattgtgtt 13431539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 16682154 - 16682102
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgat 440  Q
    ||||||| ||||||| | |||||||||| |||||||||  |||||||||||||    
T  16682154 cctaagctgaaaacaatgatcagaagcaaatatagttcggcttctgaagtgat 16682102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Complemental strand, 17287116 - 17287084
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  17287116 agaaaaacacaagaaggggggttgaattgtgtt 17287084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Complemental strand, 17541442 - 17541410
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  17541442 agaaaaacacaagaaggggggttgaattgtgtt 17541410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 18676855 - 18676887
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  18676855 agaaaaacacaagaaggggggttgaattgtgtt 18676887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Original strand, 40002384 - 40002416
Alignment:
Q  341 gaaaaacacaagaaggggggatgaattgtgttt 373  Q
    |||||||||||||||||||| ||||||||||||    
T  40002384 gaaaaacacaagaaggggggttgaattgtgttt 40002416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 13473390 - 13473336
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||    
T  13473390 cctaagctgaaaacactgatcagaagcagatatagttctacttctgaagtgatgt 13473336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 2499283 - 2499337
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| |||||||||||||||||||||||| ||||| ||||||||| ||||||    
T  2499283 cctaagctgaaaacactaatcagaagcagatagagttctacttctgaaatgatgt 2499337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 4493799 - 4493853
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  4493799 cctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 4493853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 13034756 - 13034702
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  13034756 cctaagctgaaaacactgatcagaagcagatacagttctacttctgaagtgatgt 13034702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 15467170 - 15467224
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| |||||||||||| |||||||||    
T  15467170 cctaagctgaaaacactgatcagaagcagatagagttccacttcttaagtgatgt 15467224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 16546240 - 16546186
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  16546240 cctaagctgaaaacactgatcagaagcagataaagttctacttctgaagtgatgt 16546186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 16619422 - 16619476
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  16619422 cctaagctgaaaacactgatcagaagcagataaagttctacttctgaagtgatgt 16619476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 21691679 - 21691733
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  21691679 cctaagctgaaaacactgatcagaagcagataaagttctacttctgaagtgatgt 21691733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 4820748 - 4820794
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||||||||||||||||||||| ||||| |||| |||||||||||    
T  4820748 gaaaacactaatcagaagcagatagagttctacttttgaagtgatgt 4820794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 13879406 - 13879452
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  13879406 gaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 13879452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 21284277 - 21284223
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| | ||||||||||||||    
T  21284277 cctaagctgaaaacactgatcagaagcagatagagttctatttctgaagtgatgt 21284223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 28623256 - 28623202
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||| ||||| |||||||||||||| ||||| ||||||||||||||||    
T  28623256 cctaagctgaacacactgatcagaagcagatagagttctacttctgaagtgatgt 28623202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 397 - 442
Target Start/End: Complemental strand, 9710728 - 9710683
Alignment:
Q  397 aaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||||| |||||||||||||| ||||| ||||||||||||||||    
T  9710728 aaaacactgatcagaagcagatagagttctacttctgaagtgatgt 9710683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 16155635 - 16155591
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgat 440  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||    
T  16155635 gaaaacactaatcagaagcagatagaattctacttctgaagtgat 16155591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 35954814 - 35954762
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgat 440  Q
    ||||||| ||||||||| |||||||||||||| ||||  ||||||||||||||    
T  35954814 cctaagctgaaaacactgatcagaagcagatagagttttacttctgaagtgat 35954762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 442
Target Start/End: Complemental strand, 41843323 - 41843271
Alignment:
Q  390 taagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||| ||||||||| |||||||||||| | ||||| ||||||||||||||||    
T  41843323 taagctgaaaacactgatcagaagcagaaagagttctacttctgaagtgatgt 41843271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 442
Target Start/End: Complemental strand, 4832216 - 4832173
Alignment:
Q  399 aacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||| |||||||||||||| ||||| ||||||||||||||||    
T  4832216 aacactgatcagaagcagatagagttctacttctgaagtgatgt 4832173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 372
Target Start/End: Complemental strand, 10884137 - 10884093
Alignment:
Q  326 attttgaaggtgtaagaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||  ||||||||||||||||||||| |||||||||||    
T  10884137 attttgaaggtg--agaaaaacacaagaaggggggttgaattgtgtt 10884093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 435
Target Start/End: Complemental strand, 16557513 - 16557466
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaa 435  Q
    ||||||| ||||||||| |||||||||||||| ||||| |||||||||    
T  16557513 cctaagctgaaaacactgatcagaagcagatagagttctacttctgaa 16557466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 435
Target Start/End: Original strand, 16608149 - 16608196
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaa 435  Q
    ||||||| ||||||||| |||||||||||||| ||||| |||||||||    
T  16608149 cctaagctgaaaacactgatcagaagcagatagagttctacttctgaa 16608196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 442
Target Start/End: Complemental strand, 19328910 - 19328859
Alignment:
Q  391 aagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||| ||||||||| |||| ||||||||| ||||| ||||||||||||||||    
T  19328910 aagctgaaaacactgatcacaagcagatagagttctacttctgaagtgatgt 19328859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 11792133 - 11792179
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||||| ||||||||||||||  |||| ||||||||||||||||    
T  11792133 gaaaacactgatcagaagcagatagtgttctacttctgaagtgatgt 11792179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 13027854 - 13027800
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||| | |||||||||||||| ||||| |||||| |||||||||    
T  13027854 cctaagccgaaaacattgatcagaagcagatagagttctacttctaaagtgatgt 13027800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 13138820 - 13138774
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| | |||||||||||||| ||||| ||||||||||||||||    
T  13138820 gaaaacattgatcagaagcagatagagttctacttctgaagtgatgt 13138774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 14186949 - 14186995
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||||| |||||||||||||| | ||| ||||||||||||||||    
T  14186949 gaaaacactgatcagaagcagatagaattctacttctgaagtgatgt 14186995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 16310850 - 16310804
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||||||||||||||||| ||||| |||  |||||||||||||||    
T  16310850 gaaaacactaatcagaagcaaatataattctgcttctgaagtgatgt 16310804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 372
Target Start/End: Complemental strand, 21382394 - 21382351
Alignment:
Q  327 ttttgaaggtgtaagaaaaacacaagaaggggggatgaattgtgtt 372  Q
    |||||||||||  ||||||||||||||||||||| |||||||||||    
T  21382394 ttttgaaggtg--agaaaaacacaagaaggggggttgaattgtgtt 21382351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 1559998 - 1559965
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  1559998 agaaaaacacaagaaggggggttgaattgtgttt 1559965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 4433495 - 4433462
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  4433495 agaaaaacacaagaaggggggttgaattgtgttt 4433462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 6045185 - 6045152
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  6045185 agaaaaacacaagaaggggggttgaattgtgttt 6045152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 13259398 - 13259365
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  13259398 agaaaaacacaagaaggggggttgaattgtgttt 13259365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 13261630 - 13261597
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  13261630 agaaaaacacaagaaggggggttgaattgtgttt 13261597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Original strand, 14424571 - 14424616
Alignment:
Q  397 aaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||||| |||||||||||||  ||||| ||||||||||||||||    
T  14424571 aaaacactgatcagaagcagatcgagttctacttctgaagtgatgt 14424616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 14746574 - 14746541
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  14746574 agaaaaacacaagaaggggggttgaattgtgttt 14746541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 442
Target Start/End: Original strand, 15087809 - 15087862
Alignment:
Q  390 taagcagaaaacacta-atcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||| |||||||||  |||||||||||||| ||||| ||||||||||||||||    
T  15087809 taagctgaaaacacttgatcagaagcagatagagttctacttctgaagtgatgt 15087862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 18440592 - 18440625
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  18440592 agaaaaacacaagaaggggggttgaattgtgttt 18440625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 21284329 - 21284296
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  21284329 agaaaaacacaagaaggggggttgaattgtgttt 21284296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Complemental strand, 23280869 - 23280824
Alignment:
Q  397 aaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||||| ||||||||||||||  ||||||||||| |||||||||    
T  23280869 aaaacactgatcagaagcagatagtgttccacttctaaagtgatgt 23280824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 24883298 - 24883265
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  24883298 agaaaaacacaagaaggggggttgaattgtgttt 24883265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 33604097 - 33604139
Alignment:
Q  328 tttgaaggtgtaagaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||  ||||||||||||||||||||| |||||||||||    
T  33604097 tttgaaggtg--agaaaaacacaagaaggggggttgaattgtgtt 33604139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Complemental strand, 33692616 - 33692571
Alignment:
Q  397 aaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||| | |||||||| ||||| ||||||||||||||||||||||    
T  33692616 aaaacattgatcagaagtagatagagttccacttctgaagtgatgt 33692571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 439
Target Start/End: Complemental strand, 48237736 - 48237687
Alignment:
Q  390 taagcagaaaacactaatcagaagcagatatagttccacttctgaagtga 439  Q
    ||||| ||||||||| |||||||| ||||| ||||| |||||||||||||    
T  48237736 taagctgaaaacactgatcagaagtagatagagttctacttctgaagtga 48237687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 4493747 - 4493779
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  4493747 agaaaaacacaagaaggggggttgaattgtgtt 4493779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 11792073 - 11792105
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  11792073 agaaaaacacaagaaggggggttgaattgtgtt 11792105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 13302116 - 13302168
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgat 440  Q
    ||||||| ||||||||| |||||||||| ||| |||||  |||||||||||||    
T  13302116 cctaagctgaaaacacttatcagaagcaaatagagttctgcttctgaagtgat 13302168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 16315440 - 16315388
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgat 440  Q
    ||||||| ||||||||| |||||||||| ||| |||||  |||||||||||||    
T  16315440 cctaagctgaaaacactgatcagaagcaaatagagttctgcttctgaagtgat 16315388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 442
Target Start/End: Complemental strand, 16317497 - 16317445
Alignment:
Q  390 taagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||| ||||||||| |||||||||| ||| |||||  |||||||||||||||    
T  16317497 taagctgaaaacactgatcagaagcaaataaagttctgcttctgaagtgatgt 16317445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Complemental strand, 16557565 - 16557533
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  16557565 agaaaaacacaagaaggggggttgaattgtgtt 16557533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 16608097 - 16608129
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  16608097 agaaaaacacaagaaggggggttgaattgtgtt 16608129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Complemental strand, 48806838 - 48806806
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  48806838 agaaaaacacaagaaggggggttgaattgtgtt 48806806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 25188657 - 25188711
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  25188657 cctaagctgaaaacactgatcagaagcagatagagttccacttctgaagtgatgt 25188711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 22188944 - 22188898
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||    
T  22188944 gaaaacactgatcagaagcagatatagttctacttctgaagtgatgt 22188898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 24851517 - 24851463
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  24851517 cctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 24851463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 438
Target Start/End: Original strand, 22316857 - 22316898
Alignment:
Q  397 aaaacactaatcagaagcagatatagttccacttctgaagtg 438  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  22316857 aaaacactgatcagaagcagatatagttccacttctgaagtg 22316898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 6575009 - 6574957
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgat 440  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||    
T  6575009 cctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgat 6574957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 13964828 - 13964778
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtg 438  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||    
T  13964828 cctaagctgaaaacactgatcagaagcagataaagttctacttctgaagtg 13964778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 22455804 - 22455750
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||||  |||||||| |||||||||||||| ||||| ||||||||||||||||    
T  22455804 cctaagctcaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 22455750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 28702069 - 28702015
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||| ||| ||||| ||||||||||||||||    
T  28702069 cctaagctgaaaacactgatcagaagcaaatagagttctacttctgaagtgatgt 28702015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 39038485 - 39038431
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||  ||||||||||||||||    
T  39038485 cctaagctgaaaacactgatcagaagcagatagagttatacttctgaagtgatgt 39038431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 396 - 437
Target Start/End: Complemental strand, 20152831 - 20152790
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagt 437  Q
    |||||||||||||||||||||||| ||||| |||||||||||    
T  20152831 gaaaacactaatcagaagcagatagagttctacttctgaagt 20152790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 442
Target Start/End: Original strand, 6391923 - 6391975
Alignment:
Q  390 taagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||| ||||||||| |||||||||| ||| ||||| ||||||||||||||||    
T  6391923 taagctgaaaacactgatcagaagcatatagagttctacttctgaagtgatgt 6391975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 23234216 - 23234262
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||||| |||||||||||||| ||||  ||||||||||||||||    
T  23234216 gaaaacactgatcagaagcagatagagttttacttctgaagtgatgt 23234262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 28712551 - 28712497
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||| | |||||||||||||| ||||  ||||||||||||||||    
T  28712551 cctaagctgaaaacattgatcagaagcagatagagttatacttctgaagtgatgt 28712497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 374
Target Start/End: Complemental strand, 31328870 - 31328836
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtttg 374  Q
    ||||||||||||||||||||| |||||||||||||    
T  31328870 agaaaaacacaagaaggggggttgaattgtgtttg 31328836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 374
Target Start/End: Complemental strand, 31335591 - 31335557
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtttg 374  Q
    ||||||||||||||||||||| |||||||||||||    
T  31335591 agaaaaacacaagaaggggggttgaattgtgtttg 31335557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 38780651 - 38780705
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| |||||||||||||| ||||||||| | ||| || |||||||||||||    
T  38780651 cctaagccgaaaacactaatcataagcagatagaattctacatctgaagtgatgt 38780705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 40780564 - 40780618
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||| ||| |||||  |||||||||||||||    
T  40780564 cctaagctgaaaacactgatcagaagcaaatagagttctgcttctgaagtgatgt 40780618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 45087842 - 45087788
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| | ||  ||||||||||||||||    
T  45087842 cctaagctgaaaacactgatcagaagcagatagatttatacttctgaagtgatgt 45087788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 1041536 - 1041569
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  1041536 agaaaaacacaagaaggggggttgaattgtgttt 1041569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 22797602 - 22797644
Alignment:
Q  328 tttgaaggtgtaagaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||  ||||||||||||||||||||| |||||||||||    
T  22797602 tttgaaggtg--agaaaaacacaagaaggggggttgaattgtgtt 22797644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 24450348 - 24450315
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  24450348 agaaaaacacaagaaggggggttgaattgtgttt 24450315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 28702121 - 28702088
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  28702121 agaaaaacacaagaaggggggttgaattgtgttt 28702088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 28732745 - 28732712
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  28732745 agaaaaacacaagaaggggggttgaattgtgttt 28732712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 45087894 - 45087861
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  45087894 agaaaaacacaagaaggggggttgaattgtgttt 45087861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 6391869 - 6391901
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  6391869 agaaaaacacaagaaggggggttgaattgtgtt 6391901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 19539655 - 19539687
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  19539655 agaaaaacacaagaaggggggttgaattgtgtt 19539687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Complemental strand, 20569646 - 20569614
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  20569646 agaaaaacacaagaaggggggttgaattgtgtt 20569614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 442
Target Start/End: Complemental strand, 21538030 - 21537978
Alignment:
Q  390 taagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||| ||||||| | || ||||||||||| ||||| ||||||||||||||||    
T  21538030 taagctgaaaacattgattagaagcagatagagttctacttctgaagtgatgt 21537978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 406 - 442
Target Start/End: Complemental strand, 23185159 - 23185123
Alignment:
Q  406 atcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  23185159 atcagaagcagatagagttcaacttctgaagtgatgt 23185123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 406 - 442
Target Start/End: Complemental strand, 23596422 - 23596386
Alignment:
Q  406 atcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  23596422 atcagaagcagatagagttcaacttctgaagtgatgt 23596386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Complemental strand, 28551817 - 28551785
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  28551817 agaaaaacacaagaaggggggttgaattgtgtt 28551785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Original strand, 29243610 - 29243642
Alignment:
Q  341 gaaaaacacaagaaggggggatgaattgtgttt 373  Q
    |||||||||||||||||||| ||||||||||||    
T  29243610 gaaaaacacaagaaggggggttgaattgtgttt 29243642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 438
Target Start/End: Original strand, 7926 - 7976
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtg 438  Q
    ||||||| ||||||||| |||||||||||||| ||||||||||||||||||    
T  7926 cctaagctgaaaacactgatcagaagcagatagagttccacttctgaagtg 7976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 10631392 - 10631446
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  10631392 cctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 10631446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 13435140 - 13435194
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  13435140 cctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 13435194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 32543526 - 32543572
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  32543526 gaaaacactgatcagaagcagatagagttccacttctgaagtgatgt 32543572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 20731599 - 20731546
Alignment:
Q  389 ctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  20731599 ctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 20731546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 442
Target Start/End: Original strand, 18434775 - 18434819
Alignment:
Q  398 aaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||    
T  18434775 aaacactaatcagaagcagatagagttctacttctgaagtgatgt 18434819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 24717711 - 24717659
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgat 440  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||    
T  24717711 cctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgat 24717659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 9717089 - 9717135
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||||| |||| ||||||||| ||||||||||||||||||||||    
T  9717089 gaaaacactgatcaaaagcagatagagttccacttctgaagtgatgt 9717135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 17380818 - 17380872
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||| ||| ||||| ||||||||||||||||    
T  17380818 cctaagctgaaaacactgatcagaagcaaatagagttctacttctgaagtgatgt 17380872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 19687996 - 19688042
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  19687996 gaaaacactgatcagaagcagataaagttctacttctgaagtgatgt 19688042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 21234411 - 21234465
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| | ||| ||||||||||||||||    
T  21234411 cctaagctgaaaacactgatcagaagcagatagaattctacttctgaagtgatgt 21234465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 21624347 - 21624401
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||  ||||||||||||||||    
T  21624347 cctaagctgaaaacactgatcagaagcagatagagttttacttctgaagtgatgt 21624401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 373
Target Start/End: Original strand, 12352929 - 12352973
Alignment:
Q  327 ttttgaaggtgtaagaaaaacacaagaaggggggatgaattgtgttt 373  Q
    |||||||||||  ||||||||||||||||||||| ||||||||||||    
T  12352929 ttttgaaggtg--agaaaaacacaagaaggggggttgaattgtgttt 12352973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 20113528 - 20113473
Alignment:
Q  388 cctaagcagaaaacacta-atcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| |||||||||  |||||||||||||| ||||| ||||||||||||||||    
T  20113528 cctaagctgaaaacacttgatcagaagcagatagagttctacttctgaagtgatgt 20113473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 442
Target Start/End: Original strand, 22801409 - 22801452
Alignment:
Q  399 aacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||| |||||||||||||| ||||| ||||||||||||||||    
T  22801409 aacactgatcagaagcagatagagttctacttctgaagtgatgt 22801452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 14101338 - 14101284
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||| ||| |||||||||||||| ||||| |||| |||||||||||    
T  14101338 cctaagctgaaaatactgatcagaagcagatagagttctacttatgaagtgatgt 14101284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 15532524 - 15532470
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| ||||| |||| ||| ||||| ||||||||||||||||    
T  15532524 cctaagctgaaaacactgatcaggagcaaatagagttctacttctgaagtgatgt 15532470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 19833875 - 19833829
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||||| |||||||||||||| ||| |||| |||||||||||||    
T  19833875 gaaaacactgatcagaagcagatagagtaccacctctgaagtgatgt 19833829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 19952480 - 19952434
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctga 434  Q
    ||||||| ||||| |||||||||||||||||| ||||| ||||||||    
T  19952480 cctaagctgaaaatactaatcagaagcagatagagttctacttctga 19952434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 7752073 - 7752040
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  7752073 agaaaaacacaagaaggggggttgaattgtgttt 7752040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 16124368 - 16124335
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  16124368 agaaaaacacaagaaggggggttgaattgtgttt 16124335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 19453502 - 19453469
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  19453502 agaaaaacacaagaaggggggttgaattgtgttt 19453469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 442
Target Start/End: Original strand, 19469897 - 19469938
Alignment:
Q  401 cactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||| ||||||| |||||| ||||||||||||||||||||||    
T  19469897 cactgatcagaaacagatagagttccacttctgaagtgatgt 19469938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 19833934 - 19833901
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  19833934 agaaaaacacaagaaggggggttgaattgtgttt 19833901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 28252398 - 28252365
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  28252398 agaaaaacacaagaaggggggttgaattgtgttt 28252365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 32756764 - 32756797
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  32756764 agaaaaacacaagaaggggggttgaattgtgttt 32756797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 33866506 - 33866539
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  33866506 agaaaaacacaagaaggggggttgaattgtgttt 33866539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 12716340 - 12716288
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgat 440  Q
    ||||||| |||||||||||| |||| || |||||||||  |||||||||||||    
T  12716340 cctaagctgaaaacactaataagaaacaaatatagttctgcttctgaagtgat 12716288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 13601422 - 13601474
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgat 440  Q
    ||||||| ||||||||| |||||||||| ||| |||||  |||||||||||||    
T  13601422 cctaagctgaaaacactgatcagaagcaaatagagttctgcttctgaagtgat 13601474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Original strand, 14757585 - 14757617
Alignment:
Q  341 gaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||| |||||||||||||||||||||    
T  14757585 gaaaaacacaacaaggggggatgaattgtgttt 14757617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 15301421 - 15301453
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  15301421 agaaaaacacaagaaggggggttgaattgtgtt 15301453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 15551243 - 15551275
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  15551243 agaaaaacacaagaaggggggttgaattgtgtt 15551275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 406 - 442
Target Start/End: Original strand, 16333002 - 16333038
Alignment:
Q  406 atcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  16333002 atcagaagcagatagagttctacttctgaagtgatgt 16333038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Complemental strand, 27167272 - 27167240
Alignment:
Q  341 gaaaaacacaagaaggggggatgaattgtgttt 373  Q
    |||||||||||||||||||| ||||||||||||    
T  27167272 gaaaaacacaagaaggggggttgaattgtgttt 27167240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 17246863 - 17246917
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  17246863 cctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 17246917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 24628753 - 24628699
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  24628753 cctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 24628699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 29120621 - 29120675
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  29120621 cctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 29120675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 55379565 - 55379619
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  55379565 cctaagctgaaaacactgatcagaagcagataaagttctacttctgaagtgatgt 55379619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 56033781 - 56033835
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  56033781 cctaagctgaaaacacttatcagaagcagatagagttctacttctgaagtgatgt 56033835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 236
Target Start/End: Original strand, 20843443 - 20843539
Alignment:
Q  141 gttgtggtgggatgcaatcgaccaatcattttttccttcactccagtttatttg-gttctctttggtatttggttcgtggtttgttggggttttctt 236  Q
    ||||||||| |||| |||||| ||||||||| |||||||| | || ||| |||  |||||||||||||||||||| |||| | |||||| |||||||    
T  20843443 gttgtggtgagatggaatcgatcaatcatttgttccttcattgcattttttttttgttctctttggtatttggtttgtggctggttgggattttctt 20843539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 10071757 - 10071811
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| || ||||||| ||| ||||||||||||||||||||||    
T  10071757 cctaagctgaaaacactgataagaagcaaatagagttccacttctgaagtgatgt 10071811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 14905181 - 14905127
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||| | |||||||||||||| ||||| ||||||||||||||||    
T  14905181 cctaagctgaaaacattgatcagaagcagatagagttctacttctgaagtgatgt 14905127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 19883946 - 19884000
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||||  ||||||||||||||||||||||| | |||||||||| |||||||||    
T  19883946 cctaagctaaaaacactaatcagaagcagatagaattccacttcttaagtgatgt 19884000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 22676416 - 22676362
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| |||| |||||||||||    
T  22676416 cctaagctgaaaacactgatcagaagcagatagagttctacttttgaagtgatgt 22676362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 23749779 - 23749833
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||| ||||| ||||| ||||||||||||||||    
T  23749779 cctaagctgaaaacactgatcagaagtagatagagttctacttctgaagtgatgt 23749833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 54679114 - 54679168
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||| ||||||||| ||||| ||||||||||||||||    
T  54679114 cctaagctgaaaacactgatcaaaagcagatagagttctacttctgaagtgatgt 54679168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 397 - 442
Target Start/End: Complemental strand, 13576995 - 13576950
Alignment:
Q  397 aaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||||| |||||||||||||| ||||| ||||||||||||||||    
T  13576995 aaaacactgatcagaagcagatagagttctacttctgaagtgatgt 13576950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 12600008 - 12600060
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgat 440  Q
    ||||||| ||||||||| |||||||||| ||| ||||| ||||||||||||||    
T  12600008 cctaagctgaaaacactgatcagaagcaaataaagttctacttctgaagtgat 12600060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 442
Target Start/End: Original strand, 44397464 - 44397516
Alignment:
Q  390 taagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||| ||||||||| |||||||||||||| |||||  |||||||||||||||    
T  44397464 taagctgaaaacactgatcagaagcagatagagttctgcttctgaagtgatgt 44397516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 373
Target Start/End: Original strand, 11514456 - 11514500
Alignment:
Q  327 ttttgaaggtgtaagaaaaacacaagaaggggggatgaattgtgttt 373  Q
    |||||||||||  ||||||||||||||||||||| ||||||||||||    
T  11514456 ttttgaaggtg--agaaaaacacaagaaggggggttgaattgtgttt 11514500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 14605762 - 14605707
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccac-ttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||||| ||| || ||||||||||||||    
T  14605762 cctaagctgaaaacactgatcagaagcagatataattctactttctgaagtgatgt 14605707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 373
Target Start/End: Original strand, 19570437 - 19570481
Alignment:
Q  327 ttttgaaggtgtaagaaaaacacaagaaggggggatgaattgtgttt 373  Q
    |||||||||||  ||||||||||||||||||||| ||||||||||||    
T  19570437 ttttgaaggtg--agaaaaacacaagaaggggggttgaattgtgttt 19570481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 3792586 - 3792640
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| |||||||||  | ||||||||||| ||||| ||||||||||||||||    
T  3792586 cctaagctgaaaacactgcttagaagcagatagagttctacttctgaagtgatgt 3792640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 15134980 - 15135026
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||||| |||||||||| ||| |||||||||||| |||||||||    
T  15134980 gaaaacactgatcagaagcaaatagagttccacttctaaagtgatgt 15135026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 37436378 - 37436332
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||||| |||||||||||||| ||||| |||| |||||||||||    
T  37436378 gaaaacactgatcagaagcagatagagttctacttatgaagtgatgt 37436332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 5872804 - 5872837
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  5872804 agaaaaacacaagaaggggggttgaattgtgttt 5872837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 14836931 - 14836898
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  14836931 agaaaaacacaagaaggggggttgaattgtgttt 14836898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 372
Target Start/End: Complemental strand, 19611290 - 19611248
Alignment:
Q  328 tttgaaggtgtaagaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||  ||||||||||||||||||||| |||||||||||    
T  19611290 tttgaaggtg--agaaaaacacaagaaggggggttgaattgtgtt 19611248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 373
Target Start/End: Original strand, 25656554 - 25656596
Alignment:
Q  329 ttgaaggtgtaagaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||  |||||||||||||||||||| ||||||||||||    
T  25656554 ttgaaggtgt--gaaaaacacaagaaggggggttgaattgtgttt 25656596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 31267619 - 31267586
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  31267619 agaaaaacacaagaaggggggttgaattgtgttt 31267586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 33377571 - 33377604
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  33377571 agaaaaacacaagaaggggggttgaattgtgttt 33377604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 54679062 - 54679095
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  54679062 agaaaaacacaagaaggggggttgaattgtgttt 54679095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Complemental strand, 3500561 - 3500529
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  3500561 agaaaaacacaagaaggggggttgaattgtgtt 3500529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Original strand, 4947771 - 4947803
Alignment:
Q  341 gaaaaacacaagaaggggggatgaattgtgttt 373  Q
    |||||||||||||||||||| ||||||||||||    
T  4947771 gaaaaacacaagaaggggggttgaattgtgttt 4947803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 6640893 - 6640925
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  6640893 agaaaaacacaagaaggggggttgaattgtgtt 6640925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 13026991 - 13027023
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  13026991 agaaaaacacaagaaggggggttgaattgtgtt 13027023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 15134920 - 15134952
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  15134920 agaaaaacacaagaaggggggttgaattgtgtt 15134952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 374
Target Start/End: Original strand, 15560473 - 15560505
Alignment:
Q  342 aaaaacacaagaaggggggatgaattgtgtttg 374  Q
    ||||||||||||||||||| |||||||||||||    
T  15560473 aaaaacacaagaaggggggttgaattgtgtttg 15560505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Complemental strand, 18078734 - 18078702
Alignment:
Q  341 gaaaaacacaagaaggggggatgaattgtgttt 373  Q
    |||||||||||||||||||| ||||||||||||    
T  18078734 gaaaaacacaagaaggggggttgaattgtgttt 18078702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 40859908 - 40859940
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  40859908 agaaaaacacaagaaggggggttgaattgtgtt 40859940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 6089985 - 6090039
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  6089985 cctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 6090039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 14968626 - 14968680
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  14968626 cctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 14968680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 25399147 - 25399101
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  25399147 gaaaacactaatcagaagcagatagagttctacttctgaagtgatgt 25399101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 29952337 - 29952283
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  29952337 cctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 29952283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 30001491 - 30001437
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  30001491 cctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 30001437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 38178545 - 38178491
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| |||||||||||||||||||||||| |||||  |||||||||||||||    
T  38178545 cctaagctgaaaacactaatcagaagcagatagagttcttcttctgaagtgatgt 38178491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 40799147 - 40799201
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  40799147 cctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 40799201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 47206920 - 47206974
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  47206920 cctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 47206974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 52283052 - 52283106
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  52283052 cctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 52283106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 1241975 - 1241921
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| | ||| ||||||||||||||||    
T  1241975 cctaagctgaaaacactgatcagaagcagatagatttctacttctgaagtgatgt 1241921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 11222053 - 11222107
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| |||||| |||||||||    
T  11222053 cctaagctgaaaacactgatcagaagcagatagagttctacttctaaagtgatgt 11222107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 11222805 - 11222859
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| |||||| |||||||||    
T  11222805 cctaagctgaaaacactgatcagaagcagatagagttctacttctaaagtgatgt 11222859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 12727136 - 12727082
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| | ||| ||||||||||||||||    
T  12727136 cctaagctgaaaacactgatcagaagcagatagaattctacttctgaagtgatgt 12727082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 14954667 - 14954721
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||||| ||||    
T  14954667 cctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtaatgt 14954721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 19885978 - 19885924
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||| ||| ||||| ||||||||||||||||    
T  19885978 cctaagctgaaaacacttatcagaagcaaatagagttctacttctgaagtgatgt 19885924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 20628362 - 20628308
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||| | |||||||||||||| ||||| ||||||||||||||||    
T  20628362 cctaagctgaaaacagtgatcagaagcagatagagttctacttctgaagtgatgt 20628308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 24776404 - 24776358
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  24776404 gaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 24776358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 49554410 - 49554356
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||| | |||||||||||||| ||||| ||||||||||||||||    
T  49554410 cctaagctgaaaacattgatcagaagcagatagagttctacttctgaagtgatgt 49554356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 401 - 442
Target Start/End: Complemental strand, 19250277 - 19250236
Alignment:
Q  401 cactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  19250277 cactaatcaaaagcagatagagttccacttctgaagtgatgt 19250236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 13823327 - 13823379
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgat 440  Q
    ||||||| ||||||||| |||||||||||||| ||||| | ||||||||||||    
T  13823327 cctaagccgaaaacactgatcagaagcagataaagttctaattctgaagtgat 13823379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 442
Target Start/End: Complemental strand, 53057623 - 53057571
Alignment:
Q  390 taagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||| |||||| ||||||||||| ||||| ||||| ||||||||||||||||    
T  53057623 taagctgaaaactctaatcagaagtagatagagttctacttctgaagtgatgt 53057571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 373
Target Start/End: Complemental strand, 19888192 - 19888144
Alignment:
Q  323 ttgattttgaaggtgtaagaaaaacacaagaaggggggatgaattgtgttt 373  Q
    |||||| ||||||||  ||||||||||||||||||||| ||||||||||||    
T  19888192 ttgattctgaaggtg--agaaaaacacaagaaggggggttgaattgtgttt 19888144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 2560442 - 2560496
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| || ||||||||||| ||||| |||| |||||||||||    
T  2560442 cctaagccgaaaacactgataagaagcagatagagttctacttttgaagtgatgt 2560496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 18122540 - 18122494
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||||| ||||| |||||||| ||||| ||||||||||||||||    
T  18122540 gaaaacactgatcaggagcagatagagttctacttctgaagtgatgt 18122494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 22804913 - 22804867
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||||| |||||||||||||| ||||| |||| |||||||||||    
T  22804913 gaaaacactgatcagaagcagatagagttctacttttgaagtgatgt 22804867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 2025301 - 2025334
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  2025301 agaaaaacacaagaaggggggttgaattgtgttt 2025334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 2560390 - 2560423
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  2560390 agaaaaacacaagaaggggggttgaattgtgttt 2560423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 4433172 - 4433205
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  4433172 agaaaaacacaagaaggggggttgaattgtgttt 4433205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 373
Target Start/End: Original strand, 13601636 - 13601678
Alignment:
Q  329 ttgaaggtgtaagaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||  |||||||||||||||||||| ||||||||||||    
T  13601636 ttgaaggtgt--gaaaaacacaagaaggggggttgaattgtgttt 13601678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 15663561 - 15663528
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  15663561 agaaaaacacaagaaggggggttgaattgtgttt 15663528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 16076340 - 16076373
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  16076340 agaaaaacacaagaaggggggttgaattgtgttt 16076373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 17910829 - 17910796
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  17910829 agaaaaacacaagaaggggggttgaattgtgttt 17910796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 17960813 - 17960846
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  17960813 agaaaaacacaagaaggggggttgaattgtgttt 17960846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 21735584 - 21735617
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  21735584 agaaaaacacaagaaggggggttgaattgtgttt 21735617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 22150412 - 22150445
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  22150412 agaaaaacacaagaaggggggttgaattgtgttt 22150445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 24707381 - 24707348
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  24707381 agaaaaacacaagaaggggggttgaattgtgttt 24707348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 28165388 - 28165421
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  28165388 agaaaaacacaagaaggggggttgaattgtgttt 28165421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 3237899 - 3237931
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  3237899 agaaaaacacaagaaggggggttgaattgtgtt 3237931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 14954615 - 14954647
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  14954615 agaaaaacacaagaaggggggttgaattgtgtt 14954647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 444
Target Start/End: Complemental strand, 19889839 - 19889783
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgtcc 444  Q
    ||||||| ||||||||| || ||||||| ||| |||||  |||||||||||||||||    
T  19889839 cctaagctgaaaacactgattagaagcaaatagagttctgcttctgaagtgatgtcc 19889783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Complemental strand, 21639233 - 21639201
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  21639233 agaaaaacacaagaaggggggttgaattgtgtt 21639201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 2226 - 2280
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||| ||||| |||||||||||||| ||||| ||||||||||||||||    
T  2226 cctaagctgaatacactgatcagaagcagatagagttctacttctgaagtgatgt 2280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 9223 - 9277
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| | ||| ||||||||||||||||    
T  9223 cctaagctgaaaacactgatcagaagcagatagaattctacttctgaagtgatgt 9277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 7555 - 7509
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  7555 gaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 7509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 6578 - 6524
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||| ||||||||| ||||| ||||||||||||||||    
T  6578 cctaagccgaaaacacttatcaaaagcagatagagttctacttctgaagtgatgt 6524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 19500 - 19454
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||||||||||||||||||||| ||||| |||||||| |||||||    
T  19500 gaaaacactaatcagaagcagatagagttctacttctgacgtgatgt 19454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 443
Target Start/End: Original strand, 7096 - 7142
Alignment:
Q  397 aaaacactaatcagaagcagatatagttccacttctgaagtgatgtc 443  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||||    
T  7096 aaaacactgatcagaagcagatagtgttccacttctgaagtgatgtc 7142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 878 - 932
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| | ||| ||||||||||||||||    
T  878 cctaagctgaaaacactgatcagaagcagatagaattctacttctgaagtgatgt 932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 25685 - 25739
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||| ||| ||||| ||||||||||||||||    
T  25685 cctaagctgaaaacactgatcagaagcaaatagagttctacttctgaagtgatgt 25739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 111454 - 111400
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||| ||||| |||| |||||||||||    
T  111454 cctaagctgaaaacactgatcagaagcagatagagttctacttttgaagtgatgt 111400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 24622 - 24576
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||||||||||||||||||||| || || ||||||||||||||||    
T  24622 gaaaacactaatcagaagcagatagagctctacttctgaagtgatgt 24576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Original strand, 13974 - 14006
Alignment:
Q  341 gaaaaacacaagaaggggggatgaattgtgttt 373  Q
    |||||||||||||||||||| ||||||||||||    
T  13974 gaaaaacacaagaaggggggttgaattgtgttt 14006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 102812 - 102866
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||| ||||||||| ||||| ||||||||||||||||    
T  102812 cctaagctgaaaacactgatcataagcagatagagttctacttctgaagtgatgt 102866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 158403 - 158457
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| |||| |||| || ||||||||||| ||||||||||||||||||||||    
T  158403 cctaagctgaaatcacttattagaagcagatagagttccacttctgaagtgatgt 158457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 36634 - 36666
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  36634 agaaaaacacaagaaggggggttgaattgtgtt 36666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 134694 - 134726
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  134694 agaaaaacacaagaaggggggttgaattgtgtt 134726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 397 - 442
Target Start/End: Original strand, 83627 - 83672
Alignment:
Q  397 aaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||||    
T  83627 aaaacactgatcagaagcagatagagttccacttctgaagttatgt 83672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 219496 - 219547
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgat 440  Q
    ||||||| ||||||||| ||||||| |||||| ||||||||||||||||||||    
T  219496 cctaagctgaaaacactgatcagaa-cagatagagttccacttctgaagtgat 219547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 378397 - 378353
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgat 440  Q
    |||||||||||||||||||| ||| |||||  |||||||||||||    
T  378397 gaaaacactaatcagaagcaaatagagttctgcttctgaagtgat 378353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 211616 - 211671
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccac-ttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||||| ||| || ||||||||||||||    
T  211616 cctaagctgaaaacactgatcagaagcagatataattctactttctgaagtgatgt 211671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 806 - 752
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||||||  | ||| ||||||||||||||||    
T  806 cctaagctgaaaacactgatcagaagcagatggaattctacttctgaagtgatgt 752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Complemental strand, 858 - 826
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  858 agaaaaacacaagaaggggggttgaattgtgtt 826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 17588 - 17642
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||| ||||||||| |||||||||| ||| | ||| ||||||||||||||||    
T  17588 cctaagctgaaaacactgatcagaagcaaatagatttctacttctgaagtgatgt 17642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 79205 - 79159
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||||| || ||||||||||| ||||| ||||||||||||||||    
T  79205 gaaaacactgattagaagcagatagagttctacttctgaagtgatgt 79159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 59948 - 59902
Alignment:
Q  396 gaaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    ||||||||| |||||||| ||||| ||||| ||||||||||||||||    
T  59948 gaaaacactgatcagaagtagatagagttctacttctgaagtgatgt 59902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 374
Target Start/End: Original strand, 63540 - 63574
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtttg 374  Q
    ||||||||||||||||||||| |||||||||||||    
T  63540 agaaaaacacaagaaggggggttgaattgtgtttg 63574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Complemental strand, 51 - 6
Alignment:
Q  397 aaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||||| |||||||||||||  ||||| ||||||||||||||||    
T  51 aaaacactgatcagaagcagatcgagttctacttctgaagtgatgt 6  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0752 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0752
Description:

Target: scaffold0752; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 622 - 655
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  622 agaaaaacacaagaaggggggttgaattgtgttt 655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 3083 - 3050
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  3083 agaaaaacacaagaaggggggttgaattgtgttt 3050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 7220 - 7187
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  7220 agaaaaacacaagaaggggggttgaattgtgttt 7187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Complemental strand, 774 - 729
Alignment:
Q  397 aaaacactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||||||| ||||||||||||||  |||||||||||||| ||||||    
T  774 aaaacactgatcagaagcagataatgttccacttctgaactgatgt 729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 21841 - 21808
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  21841 agaaaaacacaagaaggggggttgaattgtgttt 21808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 374
Target Start/End: Original strand, 2403 - 2436
Alignment:
Q  341 gaaaaacacaagaaggggggatgaattgtgtttg 374  Q
    |||||||||||||||||||| |||||||||||||    
T  2403 gaaaaacacaagaaggggggttgaattgtgtttg 2436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 442
Target Start/End: Original strand, 13262 - 13303
Alignment:
Q  401 cactaatcagaagcagatatagttccacttctgaagtgatgt 442  Q
    |||| |||||||||||||| ||||| ||||||||||||||||    
T  13262 cactgatcagaagcagatagagttcaacttctgaagtgatgt 13303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 11469 - 11436
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  11469 agaaaaacacaagaaggggggttgaattgtgttt 11436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 33765 - 33732
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  33765 agaaaaacacaagaaggggggttgaattgtgttt 33732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 52598 - 52565
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  52598 agaaaaacacaagaaggggggttgaattgtgttt 52565  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 476197 - 476164
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  476197 agaaaaacacaagaaggggggttgaattgtgttt 476164  T

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Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 482717 - 482684
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgttt 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  482717 agaaaaacacaagaaggggggttgaattgtgttt 482684  T

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Target: scaffold0530 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 2868 - 2816
Alignment:
Q  388 cctaagcagaaaacactaatcagaagcagatatagttccacttctgaagtgat 440  Q
    ||||||| ||||||||| |||||||||| ||| |||||  |||||||||||||    
T  2868 cctaagctgaaaacacttatcagaagcaaatagagttctgcttctgaagtgat 2816  T

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Target: scaffold0488 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0488
Description:

Target: scaffold0488; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 11404 - 11436
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  11404 agaaaaacacaagaaggggggttgaattgtgtt 11436  T

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Target: scaffold0471 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 2659 - 2691
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  2659 agaaaaacacaagaaggggggttgaattgtgtt 2691  T

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Target: scaffold0364 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 5378 - 5410
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  5378 agaaaaacacaagaaggggggttgaattgtgtt 5410  T

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Target: scaffold0311 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 19328 - 19360
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  19328 agaaaaacacaagaaggggggttgaattgtgtt 19360  T

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Target: scaffold0084 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 31794 - 31826
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  31794 agaaaaacacaagaaggggggttgaattgtgtt 31826  T

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Target: scaffold0045 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Complemental strand, 88505 - 88473
Alignment:
Q  340 agaaaaacacaagaaggggggatgaattgtgtt 372  Q
    ||||||||||||||||||||| |||||||||||    
T  88505 agaaaaacacaagaaggggggttgaattgtgtt 88473  T

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