View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8033_low_8 (Length: 245)

Name: NF8033_low_8
Description: NF8033
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8033_low_8
NF8033_low_8
[»] chr3 (4 HSPs)
chr3 (1-228)||(24638488-24638715)
chr3 (1-228)||(24647417-24647644)
chr3 (20-227)||(48099603-48099810)
chr3 (20-223)||(20620340-20620531)
[»] chr1 (7 HSPs)
chr1 (20-227)||(44387237-44387444)
chr1 (20-227)||(9932321-9932528)
chr1 (54-226)||(24209903-24210075)
chr1 (54-226)||(45029680-45029852)
chr1 (54-226)||(45034531-45034703)
chr1 (21-164)||(7324509-7324652)
chr1 (51-157)||(30332255-30332361)
[»] chr8 (3 HSPs)
chr8 (8-227)||(23583874-23584093)
chr8 (51-157)||(32307300-32307406)
chr8 (21-157)||(40270647-40270783)
[»] scaffold0134 (1 HSPs)
scaffold0134 (30-220)||(40683-40873)
[»] chr2 (1 HSPs)
chr2 (30-155)||(1586475-1586600)
[»] chr6 (2 HSPs)
chr6 (54-226)||(33165919-33166091)
chr6 (30-223)||(16594532-16594725)
[»] scaffold0655 (1 HSPs)
scaffold0655 (21-122)||(5960-6061)
[»] scaffold0009 (1 HSPs)
scaffold0009 (183-223)||(31918-31958)


Alignment Details
Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 24638715 - 24638488
Alignment:
Q  1 cctgtcattctacttccgtctattgtatgtttcttggtgacaaccttacatcatggtcttccaaacgacaacccacgctttctcactccagtgcagaagc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24638715 cctgtcattctacttccgtctattgtatgtttcttggtgacaaccttacatcatggtcttccaaacgacaacccacgctttctcactccagtgcagaagc 24638616  T
Q  101 cggatacagaggtgttgctaatatggtttttgaatcttgttggcttcgcaatcttctcttggagcttcgctacccactttcccaggctactttggtgtat 200  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24638615 cggatacagaggtgttgctaatatggtttctgaatcttgttggcttcgcaatcttctcttggagcttcgctacccactttcccaggctactttggtgtat 24638516  T
Q  201 tgtgataatgttaatgccatctaccttg 228  Q
    ||||||||||||||||||||||||||||    
T  24638515 tgtgataatgttaatgccatctaccttg 24638488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 24647644 - 24647417
Alignment:
Q  1 cctgtcattctacttccgtctattgtatgtttcttggtgacaaccttacatcatggtcttccaaacgacaacccacgctttctcactccagtgcagaagc 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  24647644 cctgtcattctacttccgtctattgtgtgtttcttggtgacaaccttacatcatggtcttccaaacgacaacccacactttctcaatccagtgcagaagc 24647545  T
Q  101 cggatacagaggtgttgctaatatggtttttgaatcttgttggcttcgcaatcttctcttggagcttcgctacccactttcccaggctactttggtgtat 200  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24647544 cggatacagaggtgttgctaatatggtttctgaatcttgttggcttcgcaatcttctcttggagcttcgctacccactttcccaggctactttggtgtat 24647445  T
Q  201 tgtgataatgttaatgccatctaccttg 228  Q
    ||||||||||||||||||||||||||||    
T  24647444 tgtgataatgttaatgccatctaccttg 24647417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 20 - 227
Target Start/End: Complemental strand, 48099810 - 48099603
Alignment:
Q  20 ctattgtatgtttcttggtgacaaccttacatcatggtcttccaaacgacaacccacgctttctcactccagtgcagaagccggatacagaggtgttgct 119  Q
    ||||||| ||||||||||||||||||| |  || ||||||||||| ||||||||||| ||||| | ||| ||||||||||| |  ||||| |||||||||    
T  48099810 ctattgtgtgtttcttggtgacaacctcatctcctggtcttccaagcgacaacccacactttcgcgctctagtgcagaagctgagtacaggggtgttgct 48099711  T
Q  120 aatatggtttttgaatcttgttggcttcgcaatcttctcttggagcttcgctacccactttcccaggctactttggtgtattgtgataatgttaatgcca 219  Q
    ||| |||| | |||||||||||||||||| || ||||||||||| ||||  | |||||| || || |||||||||||||||||||||||||||| |||||    
T  48099710 aatgtggtatctgaatcttgttggcttcgtaaccttctcttggaacttcatttcccactctctcaagctactttggtgtattgtgataatgttagtgcca 48099611  T
Q  220 tctacctt 227  Q
    | ||||||    
T  48099610 tttacctt 48099603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 223
Target Start/End: Original strand, 20620340 - 20620531
Alignment:
Q  20 ctattgtatgtttcttggtgacaaccttacatcatggtcttccaaacgacaacccacgctttctcactccagtgcagaagccggatacagaggtgttgct 119  Q
    ||||||| ||||||||||||||||||| |  ||||| |||| ||||||||||||||||||||||  ||||| |||||||||   |||||               
T  20620340 ctattgtgtgtttcttggtgacaacctcatttcatgatctttcaaacgacaacccacgctttcttgctccaatgcagaagctaaataca----------- 20620428  T
Q  120 aatatggtttttgaatcttgttggcttcgcaatcttctcttggagcttcgctacccactttcccaggctactttggtgtattgtgataatgttaatgcca 219  Q
     || |||||| ||| || ||||||||||||||||||||||| ||| ||| ||||||||||||||||||| |||||| ||| || |||||||||| | |||    
T  20620429 -atgtggtttctgagtcgtgttggcttcgcaatcttctcttagagtttcactacccactttcccaggctcctttggagtactgcgataatgttacttcca 20620527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 1e-56; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 20 - 227
Target Start/End: Original strand, 44387237 - 44387444
Alignment:
Q  20 ctattgtatgtttcttggtgacaaccttacatcatggtcttccaaacgacaacccacgctttctcactccagtgcagaagccggatacagaggtgttgct 119  Q
    ||||||| ||||||||||||||||||| |  || ||||||||||||||||||||||| ||||||  ||| |||||||||||    || |  |||||||||    
T  44387237 ctattgtgtgtttcttggtgacaacctcatttcttggtcttccaaacgacaacccacactttcttgctcaagtgcagaagctaagtatatgggtgttgct 44387336  T
Q  120 aatatggtttttgaatcttgttggcttcgcaatcttctcttggagcttcgctacccactttcccaggctactttggtgtattgtgataatgttaatgcca 219  Q
    ||| |||||| |||||| ||||||||||||||||||||||| ||||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||||    
T  44387337 aatgtggtttctgaatcatgttggcttcgcaatcttctcttagagcttcactacccactttcccagactagtttggtgtattgtgataatgttagtgcca 44387436  T
Q  220 tctacctt 227  Q
    ||||||||    
T  44387437 tctacctt 44387444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 20 - 227
Target Start/End: Complemental strand, 9932528 - 9932321
Alignment:
Q  20 ctattgtatgtttcttggtgacaaccttacatcatggtcttccaaacgacaacccacgctttctcactccagtgcagaagccggatacagaggtgttgct 119  Q
    ||||||| ||||||||||||||||||| |  || ||||||||||| ||||||||||| ||||| | ||| ||||||||||| |  ||||| |||||||||    
T  9932528 ctattgtgtgtttcttggtgacaacctcatctcctggtcttccaagcgacaacccacactttcgcgctctagtgcagaagctgagtacaggggtgttgct 9932429  T
Q  120 aatatggtttttgaatcttgttggcttcgcaatcttctcttggagcttcgctacccactttcccaggctactttggtgtattgtgataatgttaatgcca 219  Q
    ||| |||| | |||||||||||||||||| || ||||||||||| ||||  | |||||| || || |||||||||||||||||||||||||||| |||||    
T  9932428 aatgtggtatctgaatcttgttggcttcgtaaccttctcttggaacttcatttcccactctctcaagctactttggtgtattgtgataatgttagtgcca 9932329  T
Q  220 tctacctt 227  Q
    | ||||||    
T  9932328 tttacctt 9932321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 226
Target Start/End: Original strand, 24209903 - 24210075
Alignment:
Q  54 tggtcttccaaacgacaacccacgctttctcactccagtgcagaagccggatacagaggtgttgctaatatggtttttgaatcttgttggcttcgcaatc 153  Q
    ||||| |||||  |||||||||| || ||||  || ||||| ||||| | ||| ||||||||||||||| | || | ||| || ||||||||||| ||||    
T  24209903 tggtcctccaagagacaacccactctctctcggtctagtgctgaagcggaatatagaggtgttgctaatgttgtgtctgagtcatgttggcttcgtaatc 24210002  T
Q  154 ttctcttggagcttcgctacccactttcccaggctactttggtgtattgtgataatgttaatgccatctacct 226  Q
    |  |  ||||||| | ||  ||  || | ||||||||||||||||||||||| ||||||| ||||||||||||    
T  24210003 tcttactggagctccactttcctattcctcaggctactttggtgtattgtgacaatgttagtgccatctacct 24210075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 226
Target Start/End: Original strand, 45029680 - 45029852
Alignment:
Q  54 tggtcttccaaacgacaacccacgctttctcactccagtgcagaagccggatacagaggtgttgctaatatggtttttgaatcttgttggcttcgcaatc 153  Q
    ||||| |||||  |||||||||| || ||||  || ||||| ||||| | ||| ||||||||||||||| | || | ||| || ||||||||||| ||||    
T  45029680 tggtcctccaagagacaacccactctctctcggtctagtgctgaagcggaatatagaggtgttgctaatgttgtgtctgagtcatgttggcttcgtaatc 45029779  T
Q  154 ttctcttggagcttcgctacccactttcccaggctactttggtgtattgtgataatgttaatgccatctacct 226  Q
    |  |  ||||||| | ||  ||  || | ||||||||||||||||||||||| ||||||| ||||||||||||    
T  45029780 tcttactggagctccactttcctattcctcaggctactttggtgtattgtgacaatgttagtgccatctacct 45029852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 226
Target Start/End: Original strand, 45034531 - 45034703
Alignment:
Q  54 tggtcttccaaacgacaacccacgctttctcactccagtgcagaagccggatacagaggtgttgctaatatggtttttgaatcttgttggcttcgcaatc 153  Q
    ||||| |||||  |||||||||| || ||||  || ||||| ||||| | ||| ||||||||||||||| | || | ||| || ||||||||||| ||||    
T  45034531 tggtcctccaagagacaacccactctctctcggtctagtgctgaagcggaatatagaggtgttgctaatgttgtgtctgagtcatgttggcttcgtaatc 45034630  T
Q  154 ttctcttggagcttcgctacccactttcccaggctactttggtgtattgtgataatgttaatgccatctacct 226  Q
    |  |  ||||||| | ||  ||  || | ||||||||||||||||||||||| ||||||| ||||||||||||    
T  45034631 tcttactggagctccactttcctattcctcaggctactttggtgtattgtgacaatgttagtgccatctacct 45034703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 164
Target Start/End: Complemental strand, 7324652 - 7324509
Alignment:
Q  21 tattgtatgtttcttggtgacaaccttacatcatggtcttccaaacgacaacccacgctttctcactccagtgcagaagccggatacagaggtgttgcta 120  Q
    |||||| | |||||||||||||| ||    ||||||||||||||||| ||||||||  | |||| ||| ||||| ||||||| |||| |||||||||| |    
T  7324652 tattgtgtatttcttggtgacaatctactctcatggtcttccaaacgccaacccacattatctcgctctagtgctgaagccgaataccgaggtgttgcca 7324553  T
Q  121 atatggtttttgaatcttgttggcttcgcaatcttctcttggag 164  Q
    || | || | ||| ||||||||| | ||||| || || ||||||    
T  7324552 atgtcgtatctgagtcttgttggttacgcaacctacttttggag 7324509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 157
Target Start/End: Original strand, 30332255 - 30332361
Alignment:
Q  51 tcatggtcttccaaacgacaacccacgctttctcactccagtgcagaagccggatacagaggtgttgctaatatggtttttgaatcttgttggcttcgca 150  Q
    ||||||||| | ||||||||||| || |||||||  || ||||||||||| |  ||  | |||||||||||| | ||||  ||||||||||||||||| |    
T  30332255 tcatggtctgctaaacgacaaccaactctttctcgttctagtgcagaagcggagtatcgtggtgttgctaatgttgtttcagaatcttgttggcttcgaa 30332354  T
Q  151 atcttct 157  Q
    |||||||    
T  30332355 atcttct 30332361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 8e-45; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 8 - 227
Target Start/End: Original strand, 23583874 - 23584093
Alignment:
Q  8 ttctacttccgtctattgtatgtttcttggtgacaaccttacatcatggtcttccaaacgacaacccacgctttctcactccagtgcagaagccggatac 107  Q
    ||||||||| | ||||||| | ||||||||||| ||||| |  || |||||||||||  |||||||||| |||||||  || |||||| |||| |  |||    
T  23583874 ttctacttctggctattgtgtatttcttggtgataacctcatttcctggtcttccaagagacaacccacactttctcggtctagtgcaaaagctgagtac 23583973  T
Q  108 agaggtgttgctaatatggtttttgaatcttgttggcttcgcaatcttctcttggagcttcgctacccactttcccaggctactttggtgtattgtgata 207  Q
    || |||||||||||| |||| | ||||||||||||| ||||||| ||||||||||||||||  | |||||| || |||||||| ||||||||||||||||    
T  23583974 aggggtgttgctaatgtggtatctgaatcttgttggtttcgcaaccttctcttggagcttcatttcccactctctcaggctaccttggtgtattgtgata 23584073  T
Q  208 atgttaatgccatctacctt 227  Q
    |||||| |||||||||||||    
T  23584074 atgttagtgccatctacctt 23584093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 32307406 - 32307300
Alignment:
Q  51 tcatggtcttccaaacgacaacccacgctttctcactccagtgcagaagccggatacagaggtgttgctaatatggtttttgaatcttgttggcttcgca 150  Q
    ||||||||| ||||||||||||| || |||||||  || ||||||||||| |  ||  | |||||||||||| | |||| |||||||||||||||||| |    
T  32307406 tcatggtctgccaaacgacaaccaactctttctcgttctagtgcagaagcggagtatcgtggtgttgctaatgttgtttctgaatcttgttggcttcgaa 32307307  T
Q  151 atcttct 157  Q
    | |||||    
T  32307306 accttct 32307300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 157
Target Start/End: Complemental strand, 40270783 - 40270647
Alignment:
Q  21 tattgtatgtttcttggtgacaaccttacatcatggtcttccaaacgacaacccacgctttctcactccagtgcagaagccggatacagaggtgttgcta 120  Q
    |||||| | ||||| |||||||||||||  || |||||||||||||| || || || || || |  || ||||| ||||| | ||| ||||||||||| |    
T  40270783 tattgtgtttttctaggtgacaaccttatttcttggtcttccaaacggcagccaactctctcccgttctagtgctgaagctgaatatagaggtgttgcaa 40270684  T
Q  121 atatggtttttgaatcttgttggcttcgcaatcttct 157  Q
    || | || | |||||| |||||| |||||||||||||    
T  40270683 atgttgtctctgaatcgtgttggattcgcaatcttct 40270647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 30 - 220
Target Start/End: Original strand, 40683 - 40873
Alignment:
Q  30 tttcttggtgacaaccttacatcatggtcttccaaacgacaacccacgctttctcactccagtgcagaagccggatacagaggtgttgctaatatggttt 129  Q
    |||||||||||||||||||  || |||||||||||| | || ||||| || |||||||||||||| ||||||| ||| ||||||||||||||| | || |    
T  40683 tttcttggtgacaaccttatctcttggtcttccaaaaggcagcccactctctctcactccagtgctgaagccgaatatagaggtgttgctaatgttgtat 40782  T
Q  130 ttgaatcttgttggcttcgcaatcttctcttggagcttcgctacccactttcccaggctactttggtgtattgtgataatgttaatgccat 220  Q
     ||| || |||||| |||| || ||| | ||||||||||  |  ||  || | ||||| ||||||||||||||||| ||||||| ||||||    
T  40783 ctgagtcatgttggattcgtaaccttttattggagcttcattttcctattcctcaggccactttggtgtattgtgacaatgttagtgccat 40873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 155
Target Start/End: Complemental strand, 1586600 - 1586475
Alignment:
Q  30 tttcttggtgacaaccttacatcatggtcttccaaacgacaacccacgctttctcactccagtgcagaagccggatacagaggtgttgctaatatggttt 129  Q
    |||||||||||||||||||  || |||||||||||| | ||||| || || ||||| || ||||| ||||| | ||| ||||||||||||||| | || |    
T  1586600 tttcttggtgacaaccttatctcttggtcttccaaaaggcaacctactctctctcagtctagtgctgaagctgaatatagaggtgttgctaatgttgtat 1586501  T
Q  130 ttgaatcttgttggcttcgcaatctt 155  Q
     ||| ||||||||| |||| ||||||    
T  1586500 atgagtcttgttggattcgtaatctt 1586475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 226
Target Start/End: Original strand, 33165919 - 33166091
Alignment:
Q  54 tggtcttccaaacgacaacccacgctttctcactccagtgcagaagccggatacagaggtgttgctaatatggtttttgaatcttgttggcttcgcaatc 153  Q
    ||||| |||||  |||||||||| || ||||  || ||||| ||||| | ||| ||||||||||||||| | || | ||| || ||||||||||| ||||    
T  33165919 tggtcctccaagagacaacccactctctctcggtctagtgctgaagcggaatatagaggtgttgctaatgttgtgtctgagtcatgttggcttcgtaatc 33166018  T
Q  154 ttctcttggagcttcgctacccactttcccaggctactttggtgtattgtgataatgttaatgccatctacct 226  Q
    |  |   |||||| | ||  ||  || | ||||||||||||||||||||||| ||||||| ||||||||||||    
T  33166019 tcttacaggagctccactttcctattcctcaggctactttggtgtattgtgacaatgttagtgccatctacct 33166091  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 223
Target Start/End: Original strand, 16594532 - 16594725
Alignment:
Q  30 tttcttggtgacaaccttacatcatggtcttccaaacgacaacccacgctttctcactccagtgcagaagccggatacagaggtgttgctaatatggttt 129  Q
    ||||| |||||||||||||  || |||||||||||| | ||||| || || || |  || ||||| ||||||| ||| || || ||||| ||| | ||||    
T  16594532 tttctaggtgacaaccttatttcttggtcttccaaaaggcaacctactctctcccgttctagtgctgaagccgaatataggggagttgcaaatgttgttt 16594631  T
Q  130 ttgaatcttgttggcttcgcaatcttctcttggagcttcgctacccactttcccaggctactttggtgtattgtgataatgttaatgccatcta 223  Q
      ||||| |||||| |||||||||||||| | || || |  |  ||  || |  |||| ||||||||||||||||| ||||||| |||||||||    
T  16594632 ccgaatcgtgttggattcgcaatcttctcctagaactccattttcctattcctgaggccactttggtgtattgtgacaatgttagtgccatcta 16594725  T

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Target: scaffold0655 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 122
Target Start/End: Complemental strand, 6061 - 5960
Alignment:
Q  21 tattgtatgtttcttggtgacaaccttacatcatggtcttccaaacgacaacccacgctttctcactccagtgcagaagccggatacagaggtgttgcta 120  Q
    |||||| | |||||||||||||||||||  || |||||||||||| | || ||||| || ||||  || ||||  ||||||| ||| |||||||||||||    
T  6061 tattgtgtttttcttggtgacaaccttatctcttggtcttccaaaaggcagcccactctctctcggtctagtgttgaagccgaatatagaggtgttgcta 5962  T
Q  121 at 122  Q
    ||    
T  5961 at 5960  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 31918 - 31958
Alignment:
Q  183 caggctactttggtgtattgtgataatgttaatgccatcta 223  Q
    ||||| ||||||||||||||||| ||||||| |||||||||    
T  31918 caggcaactttggtgtattgtgacaatgttagtgccatcta 31958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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