View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8034_low_7 (Length: 270)
Name: NF8034_low_7
Description: NF8034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8034_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 8 - 256
Target Start/End: Complemental strand, 43314103 - 43313855
Alignment:
| Q |
8 |
aagcagagacctgaactcaagaaaagggctcctcttgatgaaataatggccacaagaaatagcataagttgtgttagaatgcattggtaattcaatcaac |
107 |
Q |
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| T |
43314103 |
aagcaaagacctgacctcaagaaaagggctcctcttgatgaaataatggccacaagaaatagcataagttgtgttagaatgcattggtaattcaatcaac |
43314004 |
T |
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| Q |
108 |
attagttgtgttagaatgccttactttggaacttgtgtttcctcttgtgcttgcttacagcttatagccaatggaatatgatatccattttctatcttgt |
207 |
Q |
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| T |
43314003 |
attagttgtgttagaatgccttactttggaacttgtgtttcctcttgtgcttgcttacagcttatagccaatggaatatgatatccattttctatcttgt |
43313904 |
T |
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| Q |
208 |
gcnnnnnnnncattcaaatgatttacttctttcaaagaaattggttagt |
256 |
Q |
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| T |
43313903 |
gcttttttttcattcaaatgatttacttctttcaaagaaattggttagt |
43313855 |
T |
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