View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8036_low_2 (Length: 563)

Name: NF8036_low_2
Description: NF8036
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8036_low_2
NF8036_low_2
[»] chr8 (70 HSPs)
chr8 (7-562)||(10014539-10015094)
chr8 (288-562)||(30143003-30143288)
chr8 (289-562)||(43036085-43036369)
chr8 (246-490)||(4743498-4743743)
chr8 (290-562)||(15212448-15212732)
chr8 (289-425)||(42435579-42435715)
chr8 (285-562)||(4731317-4731604)
chr8 (300-415)||(1746598-1746714)
chr8 (300-562)||(12702860-12703134)
chr8 (300-415)||(34254708-34254824)
chr8 (300-415)||(34256884-34257000)
chr8 (290-424)||(11383451-11383585)
chr8 (489-562)||(6598845-6598918)
chr8 (489-562)||(6674298-6674371)
chr8 (294-419)||(22975983-22976108)
chr8 (340-447)||(3051502-3051609)
chr8 (300-415)||(42497887-42498003)
chr8 (497-562)||(3303892-3303957)
chr8 (207-268)||(10014242-10014303)
chr8 (489-562)||(10929674-10929746)
chr8 (300-424)||(19945710-19945835)
chr8 (299-424)||(27810970-27811095)
chr8 (113-205)||(34254900-34254993)
chr8 (111-424)||(4733309-4733622)
chr8 (498-562)||(4733691-4733755)
chr8 (300-415)||(31217929-31218045)
chr8 (498-562)||(33352032-33352096)
chr8 (498-562)||(42498076-42498140)
chr8 (334-416)||(4283035-4283117)
chr8 (489-562)||(1292685-1292758)
chr8 (144-229)||(40220186-40220271)
chr8 (489-562)||(41365069-41365142)
chr8 (498-562)||(17982535-17982599)
chr8 (498-562)||(31218139-31218203)
chr8 (498-562)||(34254550-34254614)
chr8 (314-389)||(10929492-10929567)
chr8 (311-424)||(40221230-40221343)
chr8 (502-562)||(27811164-27811224)
chr8 (498-562)||(34256726-34256790)
chr8 (498-561)||(19945583-19945646)
chr8 (500-558)||(1345597-1345655)
chr8 (334-415)||(17982359-17982441)
chr8 (498-562)||(1746440-1746504)
chr8 (498-558)||(5689153-5689213)
chr8 (498-558)||(40320949-40321009)
chr8 (498-562)||(44303736-44303800)
chr8 (292-419)||(1345745-1345873)
chr8 (362-424)||(4696259-4696321)
chr8 (334-411)||(44303560-44303638)
chr8 (497-562)||(4162381-4162446)
chr8 (313-425)||(19175314-19175427)
chr8 (121-226)||(19492236-19492340)
chr8 (498-554)||(19948551-19948607)
chr8 (498-558)||(30291474-30291534)
chr8 (164-226)||(26268766-26268827)
chr8 (498-562)||(2627624-2627689)
chr8 (372-425)||(5702121-5702174)
chr8 (115-205)||(41365408-41365500)
chr8 (498-562)||(18141702-18141766)
chr8 (376-456)||(23799221-23799301)
chr8 (498-562)||(29796545-29796609)
chr8 (499-562)||(18106300-18106363)
chr8 (161-231)||(17849500-17849569)
chr8 (334-415)||(19948701-19948783)
chr8 (298-344)||(33351842-33351888)
chr8 (372-418)||(33351895-33351941)
chr8 (519-557)||(41366841-41366879)
chr8 (505-562)||(8153650-8153707)
chr8 (314-350)||(2627428-2627464)
chr8 (164-228)||(15949132-15949195)
[»] chr7 (81 HSPs)
chr7 (244-560)||(6570210-6570538)
chr7 (290-562)||(47676358-47676642)
chr7 (290-562)||(14070055-14070339)
chr7 (290-562)||(14380083-14380367)
chr7 (290-562)||(4585824-4586107)
chr7 (290-562)||(47674165-47674449)
chr7 (334-562)||(1113363-1113603)
chr7 (298-562)||(18126316-18126590)
chr7 (311-559)||(26416997-26417259)
chr7 (300-415)||(4178447-4178563)
chr7 (285-562)||(48489089-48489377)
chr7 (489-562)||(38671444-38671517)
chr7 (251-439)||(6360486-6360673)
chr7 (300-415)||(23554712-23554828)
chr7 (297-419)||(27347594-27347715)
chr7 (313-491)||(33332032-33332210)
chr7 (111-205)||(48491083-48491177)
chr7 (334-562)||(2761524-2761763)
chr7 (314-491)||(4538855-4539032)
chr7 (300-415)||(19495642-19495759)
chr7 (290-439)||(32358410-32358559)
chr7 (314-425)||(2647280-2647391)
chr7 (290-424)||(2389737-2389871)
chr7 (311-424)||(43863945-43864058)
chr7 (498-562)||(30024954-30025018)
chr7 (498-562)||(43864126-43864190)
chr7 (497-559)||(496208-496270)
chr7 (489-562)||(25615736-25615809)
chr7 (334-491)||(46515911-46516067)
chr7 (498-562)||(19502060-19502124)
chr7 (498-562)||(24514982-24515046)
chr7 (498-562)||(48491461-48491525)
chr7 (489-560)||(31105617-31105688)
chr7 (144-230)||(4509388-4509474)
chr7 (144-230)||(4511230-4511316)
chr7 (144-230)||(6431362-6431448)
chr7 (497-558)||(12098098-12098159)
chr7 (485-562)||(29990924-29991001)
chr7 (498-562)||(4178657-4178721)
chr7 (498-562)||(4538762-4538826)
chr7 (498-558)||(23554922-23554982)
chr7 (498-562)||(31733191-31733255)
chr7 (498-558)||(41317673-41317733)
chr7 (111-211)||(47674529-47674628)
chr7 (334-415)||(24515140-24515222)
chr7 (313-402)||(30026393-30026481)
chr7 (498-562)||(4253752-4253816)
chr7 (365-425)||(21983645-21983705)
chr7 (341-415)||(35853626-35853701)
chr7 (334-425)||(48491285-48491376)
chr7 (497-547)||(36146659-36146709)
chr7 (367-425)||(44847762-44847820)
chr7 (290-426)||(49092092-49092230)
chr7 (343-424)||(496365-496446)
chr7 (367-412)||(2479751-2479796)
chr7 (501-562)||(23343859-23343920)
chr7 (497-562)||(24526119-24526184)
chr7 (489-562)||(31518668-31518741)
chr7 (498-562)||(39731258-39731323)
chr7 (497-562)||(41649232-41649296)
chr7 (164-229)||(44011265-44011330)
chr7 (335-415)||(3050523-3050603)
chr7 (498-562)||(35853797-35853861)
chr7 (506-562)||(36574738-36574794)
chr7 (313-424)||(4796251-4796362)
chr7 (365-418)||(21989317-21989370)
chr7 (498-559)||(23565287-23565346)
chr7 (498-562)||(48408684-48408749)
chr7 (498-558)||(8153211-8153271)
chr7 (153-211)||(6592917-6592976)
chr7 (153-211)||(18390558-18390617)
chr7 (153-231)||(4175357-4175435)
chr7 (367-425)||(47264045-47264103)
chr7 (372-425)||(79792-79845)
chr7 (498-543)||(5817048-5817093)
chr7 (314-351)||(25767399-25767436)
chr7 (164-205)||(26214631-26214672)
chr7 (285-330)||(48491258-48491302)
chr7 (246-351)||(48599940-48600044)
chr7 (246-330)||(2761746-2761829)
chr7 (151-211)||(9189443-9189503)
[»] chr5 (63 HSPs)
chr5 (291-562)||(13487869-13488149)
chr5 (290-557)||(42426462-42426741)
chr5 (300-562)||(13239425-13239698)
chr5 (290-415)||(37438808-37438934)
chr5 (489-562)||(31182846-31182919)
chr5 (290-561)||(32636486-32636769)
chr5 (291-425)||(5057495-5057629)
chr5 (489-562)||(5887638-5887711)
chr5 (489-562)||(16451954-16452027)
chr5 (498-562)||(28750877-28750941)
chr5 (111-205)||(13487702-13487796)
chr5 (374-549)||(16649857-16650044)
chr5 (290-391)||(42428822-42428924)
chr5 (296-449)||(16650968-16651121)
chr5 (498-562)||(39468771-39468835)
chr5 (207-370)||(3076045-3076210)
chr5 (498-559)||(537907-537968)
chr5 (497-562)||(3075880-3075945)
chr5 (334-419)||(19806113-19806198)
chr5 (502-562)||(533655-533715)
chr5 (340-424)||(535616-535700)
chr5 (365-425)||(12083812-12083872)
chr5 (498-562)||(30683142-30683206)
chr5 (498-562)||(36074266-36074330)
chr5 (334-418)||(39468909-39468993)
chr5 (498-562)||(42428652-42428716)
chr5 (489-562)||(8566168-8566242)
chr5 (334-415)||(25412468-25412550)
chr5 (113-211)||(29722055-29722156)
chr5 (496-562)||(33831560-33831626)
chr5 (334-454)||(11181433-11181553)
chr5 (498-562)||(13342943-13343007)
chr5 (365-425)||(14520632-14520692)
chr5 (498-562)||(25412644-25412708)
chr5 (498-562)||(30182471-30182535)
chr5 (290-402)||(40146712-40146824)
chr5 (111-207)||(42426825-42426921)
chr5 (334-425)||(27015021-27015112)
chr5 (300-391)||(30683312-30683403)
chr5 (367-426)||(36931986-36932045)
chr5 (334-415)||(13342767-13342849)
chr5 (342-415)||(30182302-30182376)
chr5 (497-559)||(42926774-42926836)
chr5 (498-562)||(42310157-42310221)
chr5 (375-425)||(38746535-38746585)
chr5 (113-211)||(16408981-16409081)
chr5 (367-426)||(11916608-11916667)
chr5 (164-218)||(535459-535513)
chr5 (367-425)||(9352971-9353029)
chr5 (290-351)||(213007-213068)
chr5 (498-562)||(9789438-9789503)
chr5 (498-562)||(16409364-16409429)
chr5 (498-562)||(18441862-18441927)
chr5 (521-562)||(19806289-19806330)
chr5 (498-562)||(26177772-26177837)
chr5 (373-425)||(31004796-31004848)
chr5 (372-412)||(36074427-36074467)
chr5 (153-211)||(16546161-16546220)
chr5 (153-211)||(40381834-40381893)
chr5 (292-330)||(11181412-11181450)
chr5 (313-391)||(38746456-38746534)
chr5 (334-391)||(533488-533545)
chr5 (498-562)||(26170663-26170728)
[»] chr2 (57 HSPs)
chr2 (246-562)||(36318231-36318559)
chr2 (298-425)||(20522625-20522752)
chr2 (300-562)||(36988297-36988571)
chr2 (300-425)||(34389253-34389379)
chr2 (489-562)||(11151813-11151886)
chr2 (489-562)||(14202629-14202702)
chr2 (489-562)||(42362225-42362298)
chr2 (314-420)||(40015314-40015420)
chr2 (489-562)||(11690374-11690447)
chr2 (298-418)||(2837221-2837341)
chr2 (498-562)||(39284767-39284831)
chr2 (300-415)||(45099427-45099543)
chr2 (496-562)||(723966-724032)
chr2 (498-562)||(2334639-2334703)
chr2 (313-425)||(21630348-21630460)
chr2 (489-562)||(14634048-14634121)
chr2 (489-562)||(34139993-34140066)
chr2 (334-425)||(2334787-2334879)
chr2 (498-562)||(36205885-36205949)
chr2 (502-562)||(38312126-38312186)
chr2 (498-562)||(45099637-45099701)
chr2 (290-456)||(33528182-33528349)
chr2 (298-456)||(39483248-39483407)
chr2 (334-415)||(5723634-5723716)
chr2 (498-560)||(6595230-6595292)
chr2 (498-562)||(4503354-4503418)
chr2 (498-562)||(5723476-5723540)
chr2 (498-558)||(33162676-33162736)
chr2 (498-558)||(36773431-36773491)
chr2 (334-411)||(4503516-4503594)
chr2 (367-425)||(28258814-28258872)
chr2 (298-456)||(33118507-33118665)
chr2 (505-562)||(17057591-17057648)
chr2 (505-562)||(17085574-17085631)
chr2 (300-391)||(6595398-6595490)
chr2 (365-416)||(17865589-17865640)
chr2 (28-79)||(34907585-34907635)
chr2 (304-391)||(39284574-39284661)
chr2 (498-562)||(4484552-4484617)
chr2 (290-351)||(45726469-45726530)
chr2 (498-558)||(11067174-11067234)
chr2 (322-402)||(14698600-14698680)
chr2 (290-389)||(17863855-17863955)
chr2 (365-425)||(23078106-23078166)
chr2 (300-391)||(29867552-29867644)
chr2 (498-562)||(29867751-29867815)
chr2 (498-562)||(32289454-32289519)
chr2 (290-419)||(35447477-35447606)
chr2 (335-411)||(36206049-36206126)
chr2 (496-548)||(7815523-7815574)
chr2 (498-554)||(11049419-11049474)
chr2 (498-562)||(12123807-12123871)
chr2 (148-224)||(31056675-31056751)
chr2 (372-418)||(8389790-8389836)
chr2 (373-415)||(10706895-10706937)
chr2 (372-425)||(13569733-13569785)
chr2 (498-562)||(30833227-30833292)
[»] chr6 (58 HSPs)
chr6 (305-491)||(21272563-21272749)
chr6 (300-424)||(9183381-9183505)
chr6 (290-401)||(21593111-21593222)
chr6 (343-424)||(26954674-26954755)
chr6 (300-415)||(5407288-5407404)
chr6 (300-415)||(5411613-5411729)
chr6 (297-425)||(22964101-22964229)
chr6 (297-425)||(23824164-23824292)
chr6 (14-76)||(3050865-3050927)
chr6 (314-492)||(24435555-24435733)
chr6 (113-205)||(5406750-5406843)
chr6 (113-205)||(5411075-5411168)
chr6 (489-562)||(16567079-16567152)
chr6 (489-562)||(28137630-28137703)
chr6 (498-562)||(9183253-9183317)
chr6 (498-562)||(33211407-33211471)
chr6 (290-456)||(31979889-31980056)
chr6 (334-415)||(5413828-5413910)
chr6 (496-562)||(33160575-33160641)
chr6 (113-205)||(5407518-5407611)
chr6 (113-205)||(5411843-5411936)
chr6 (489-562)||(16568916-16568989)
chr6 (489-562)||(26954507-26954580)
chr6 (372-456)||(5017137-5017221)
chr6 (297-425)||(10076757-10076885)
chr6 (365-456)||(18234455-18234546)
chr6 (313-419)||(603613-603719)
chr6 (334-415)||(5406578-5406660)
chr6 (334-415)||(5410903-5410985)
chr6 (334-415)||(16452820-16452902)
chr6 (334-415)||(30834917-30834999)
chr6 (334-423)||(33160726-33160816)
chr6 (312-402)||(3809320-3809407)
chr6 (498-562)||(5406420-5406484)
chr6 (498-562)||(5410745-5410809)
chr6 (498-562)||(5413614-5413678)
chr6 (113-211)||(16554358-16554458)
chr6 (113-211)||(16630914-16631014)
chr6 (113-211)||(16652620-16652720)
chr6 (313-424)||(5571846-5571957)
chr6 (372-425)||(31086114-31086167)
chr6 (498-562)||(31404895-31404960)
chr6 (498-562)||(16452551-16452615)
chr6 (498-562)||(30834758-30834822)
chr6 (367-425)||(5757115-5757173)
chr6 (497-558)||(3039142-3039202)
chr6 (317-402)||(26661421-26661506)
chr6 (317-402)||(26767392-26767477)
chr6 (372-412)||(16452712-16452752)
chr6 (372-415)||(31405054-31405097)
chr6 (246-384)||(17759357-17759494)
chr6 (498-562)||(2171752-2171817)
chr6 (367-424)||(23896736-23896793)
chr6 (122-211)||(34166584-34166670)
chr6 (186-226)||(24543165-24543205)
chr6 (498-562)||(411991-412056)
chr6 (498-562)||(3072974-3073039)
chr6 (340-448)||(24714752-24714860)
[»] chr1 (67 HSPs)
chr1 (246-559)||(49917969-49918292)
chr1 (297-562)||(31658908-31659184)
chr1 (314-562)||(3156554-3156812)
chr1 (246-491)||(4552952-4553197)
chr1 (285-446)||(37033636-37033797)
chr1 (313-445)||(16455332-16455464)
chr1 (297-562)||(10924893-10925169)
chr1 (297-562)||(28223643-28223920)
chr1 (297-562)||(28220448-28220725)
chr1 (340-560)||(46064631-46064862)
chr1 (111-226)||(776751-776866)
chr1 (246-424)||(11348121-11348298)
chr1 (489-562)||(197130-197203)
chr1 (489-562)||(3847343-3847416)
chr1 (300-415)||(20762344-20762460)
chr1 (492-562)||(834389-834459)
chr1 (311-559)||(1833205-1833465)
chr1 (489-563)||(8551008-8551082)
chr1 (365-491)||(13598737-13598863)
chr1 (311-562)||(44454843-44455106)
chr1 (111-226)||(50167718-50167839)
chr1 (498-562)||(3189213-3189277)
chr1 (498-562)||(3198030-3198094)
chr1 (498-562)||(3206869-3206933)
chr1 (300-425)||(3189023-3189150)
chr1 (300-425)||(3197840-3197967)
chr1 (300-425)||(3206658-3206785)
chr1 (497-560)||(13138198-13138261)
chr1 (497-562)||(928200-928265)
chr1 (489-562)||(13659558-13659631)
chr1 (497-558)||(15820188-15820249)
chr1 (498-562)||(20762554-20762618)
chr1 (498-562)||(37503776-37503840)
chr1 (498-562)||(37560091-37560155)
chr1 (335-415)||(13316698-13316779)
chr1 (144-228)||(13547837-13547922)
chr1 (497-562)||(23555487-23555552)
chr1 (498-562)||(13316540-13316604)
chr1 (340-424)||(29135763-29135847)
chr1 (498-558)||(50167414-50167474)
chr1 (290-417)||(193057-193184)
chr1 (497-559)||(40122423-40122485)
chr1 (313-425)||(37070170-37070283)
chr1 (497-562)||(45644577-45644642)
chr1 (498-558)||(777112-777172)
chr1 (498-558)||(28265793-28265852)
chr1 (340-439)||(22819819-22819918)
chr1 (372-491)||(29652150-29652269)
chr1 (367-425)||(13604259-13604317)
chr1 (111-169)||(28221484-28221542)
chr1 (121-226)||(41360441-41360545)
chr1 (498-562)||(51765277-51765342)
chr1 (335-562)||(30476670-30476908)
chr1 (111-202)||(31658721-31658812)
chr1 (498-562)||(50169432-50169496)
chr1 (499-562)||(4552859-4552922)
chr1 (144-211)||(19753902-19753969)
chr1 (313-426)||(3282108-3282222)
chr1 (335-425)||(13547677-13547766)
chr1 (335-425)||(13549588-13549677)
chr1 (365-415)||(21536205-21536255)
chr1 (373-410)||(15820053-15820090)
chr1 (313-402)||(13659696-13659782)
chr1 (153-224)||(47703333-47703404)
chr1 (144-210)||(31928443-31928509)
chr1 (365-398)||(16124294-16124327)
chr1 (314-350)||(9986895-9986931)
[»] chr3 (102 HSPs)
chr3 (290-562)||(29812725-29813009)
chr3 (111-402)||(44331052-44331344)
chr3 (289-424)||(49200040-49200175)
chr3 (372-562)||(40734243-40734444)
chr3 (294-419)||(4569400-4569525)
chr3 (290-419)||(46173179-46173307)
chr3 (300-415)||(7761937-7762052)
chr3 (298-562)||(29810539-29810814)
chr3 (290-424)||(31340631-31340766)
chr3 (311-562)||(5236678-5236941)
chr3 (489-562)||(39153583-39153656)
chr3 (300-415)||(7764124-7764240)
chr3 (300-415)||(9636508-9636624)
chr3 (290-446)||(55302532-55302687)
chr3 (246-425)||(54593106-54593284)
chr3 (246-424)||(34490634-34490811)
chr3 (497-562)||(32744648-32744713)
chr3 (498-562)||(7762148-7762212)
chr3 (313-425)||(43404321-43404433)
chr3 (300-415)||(45094836-45094952)
chr3 (311-408)||(5258531-5258629)
chr3 (489-562)||(760720-760793)
chr3 (489-562)||(9581156-9581229)
chr3 (489-562)||(19684111-19684184)
chr3 (489-558)||(22835228-22835297)
chr3 (489-562)||(26386703-26386776)
chr3 (498-563)||(40735265-40735330)
chr3 (313-438)||(43402365-43402490)
chr3 (289-402)||(44331840-44331953)
chr3 (111-211)||(29812547-29812645)
chr3 (486-562)||(51398684-51398760)
chr3 (313-456)||(40592353-40592496)
chr3 (291-425)||(6096188-6096322)
chr3 (311-415)||(3393290-3393394)
chr3 (498-563)||(7764350-7764415)
chr3 (489-562)||(16498903-16498976)
chr3 (498-562)||(5260545-5260609)
chr3 (113-211)||(7763935-7764034)
chr3 (372-456)||(47923534-47923618)
chr3 (491-562)||(29682234-29682305)
chr3 (313-491)||(8126967-8127145)
chr3 (113-205)||(9634892-9634985)
chr3 (343-456)||(24694767-24694880)
chr3 (497-558)||(29196627-29196688)
chr3 (290-425)||(8370037-8370173)
chr3 (290-425)||(21711604-21711740)
chr3 (115-211)||(37407941-37408040)
chr3 (498-562)||(37408341-37408405)
chr3 (498-562)||(45095047-45095111)
chr3 (486-562)||(53921725-53921801)
chr3 (111-205)||(2075572-2075667)
chr3 (489-560)||(32890976-32891047)
chr3 (111-205)||(40734911-40735005)
chr3 (313-391)||(36018330-36018408)
chr3 (365-419)||(36029502-36029556)
chr3 (113-205)||(5258717-5258810)
chr3 (498-562)||(9636348-9636413)
chr3 (300-456)||(1735863-1736018)
chr3 (498-562)||(5258366-5258430)
chr3 (113-211)||(6718192-6718292)
chr3 (290-425)||(16264751-16264887)
chr3 (313-456)||(39032126-39032269)
chr3 (151-226)||(4386445-4386520)
chr3 (372-491)||(25929026-25929145)
chr3 (285-487)||(23410639-23410840)
chr3 (367-421)||(27038448-27038502)
chr3 (367-425)||(37408199-37408257)
chr3 (504-557)||(9666695-9666748)
chr3 (498-554)||(2075300-2075355)
chr3 (314-425)||(33386247-33386359)
chr3 (372-416)||(40735174-40735218)
chr3 (373-425)||(40845056-40845108)
chr3 (313-425)||(40912805-40912917)
chr3 (498-558)||(44700718-44700778)
chr3 (365-425)||(48438618-48438678)
chr3 (335-424)||(53921855-53921946)
chr3 (372-415)||(27027118-27027161)
chr3 (334-411)||(5260707-5260785)
chr3 (367-425)||(37726077-37726135)
chr3 (498-562)||(800980-801045)
chr3 (122-211)||(10057945-10058031)
chr3 (122-211)||(10060167-10060253)
chr3 (122-211)||(10062389-10062475)
chr3 (122-211)||(10064611-10064697)
chr3 (122-211)||(10066833-10066919)
chr3 (498-562)||(23200358-23200423)
chr3 (367-424)||(27986102-27986159)
chr3 (372-425)||(30709427-30709480)
chr3 (113-211)||(23198526-23198626)
chr3 (153-211)||(4599103-4599162)
chr3 (153-211)||(10210923-10210982)
chr3 (313-402)||(16498752-16498838)
chr3 (367-425)||(27453359-27453417)
chr3 (144-218)||(43402588-43402661)
chr3 (290-391)||(51398488-51398590)
chr3 (498-562)||(23198159-23198224)
chr3 (285-330)||(24694730-24694775)
chr3 (498-562)||(5373105-5373169)
chr3 (500-562)||(6716391-6716455)
chr3 (500-562)||(6718575-6718639)
chr3 (375-415)||(27974586-27974626)
chr3 (498-534)||(44331437-44331473)
[»] scaffold0066 (1 HSPs)
scaffold0066 (251-562)||(20637-20959)
[»] chr4 (84 HSPs)
chr4 (245-424)||(3909715-3909893)
chr4 (315-562)||(34570636-34570894)
chr4 (300-415)||(52095740-52095856)
chr4 (289-425)||(6655400-6655536)
chr4 (300-491)||(25861601-25861793)
chr4 (318-562)||(24968801-24969057)
chr4 (312-562)||(37740311-37740572)
chr4 (300-425)||(26363720-26363845)
chr4 (313-456)||(36314812-36314955)
chr4 (313-456)||(36329021-36329164)
chr4 (109-200)||(54882320-54882411)
chr4 (290-424)||(54882485-54882619)
chr4 (290-425)||(9927831-9927966)
chr4 (304-424)||(12745787-12745908)
chr4 (111-228)||(29055866-29055983)
chr4 (498-562)||(5429561-5429625)
chr4 (313-425)||(27417539-27417651)
chr4 (498-562)||(48142924-48142988)
chr4 (498-562)||(52082879-52082943)
chr4 (498-562)||(52093886-52093950)
chr4 (311-425)||(40630450-40630564)
chr4 (334-562)||(54200128-54200367)
chr4 (246-419)||(5429299-5429472)
chr4 (489-562)||(5871693-5871766)
chr4 (489-562)||(13009653-13009726)
chr4 (251-424)||(46570115-46570287)
chr4 (489-562)||(47038631-47038704)
chr4 (296-391)||(5370479-5370575)
chr4 (498-562)||(9927679-9927743)
chr4 (498-562)||(12739772-12739836)
chr4 (498-562)||(12747978-12748042)
chr4 (313-425)||(41639033-41639145)
chr4 (498-562)||(52095584-52095648)
chr4 (498-562)||(56178858-56178922)
chr4 (111-205)||(34570996-34571091)
chr4 (311-425)||(50674434-50674548)
chr4 (298-425)||(5268766-5268894)
chr4 (297-425)||(6742981-6743109)
chr4 (314-425)||(8689079-8689191)
chr4 (293-369)||(18377798-18377874)
chr4 (313-456)||(54867551-54867694)
chr4 (246-391)||(2209122-2209266)
chr4 (497-558)||(46147581-46147642)
chr4 (365-425)||(5148080-5148140)
chr4 (498-562)||(26175858-26175922)
chr4 (498-562)||(29254376-29254440)
chr4 (498-562)||(30000027-30000091)
chr4 (285-425)||(36994219-36994358)
chr4 (498-558)||(36994407-36994466)
chr4 (498-558)||(45687422-45687482)
chr4 (334-425)||(52083027-52083119)
chr4 (334-425)||(52094034-52094126)
chr4 (300-391)||(56179028-56179120)
chr4 (498-559)||(12745661-12745722)
chr4 (372-425)||(16622935-16622988)
chr4 (246-391)||(26176028-26176172)
chr4 (311-391)||(35661905-35661985)
chr4 (498-562)||(52467577-52467641)
chr4 (111-205)||(12740129-12740222)
chr4 (111-205)||(12748335-12748428)
chr4 (375-425)||(16628517-16628567)
chr4 (374-424)||(39773981-39774031)
chr4 (497-562)||(3909988-3910053)
chr4 (498-562)||(13992507-13992572)
chr4 (374-455)||(38152081-38152162)
chr4 (292-415)||(3777961-3778085)
chr4 (498-558)||(37229962-37230022)
chr4 (297-391)||(12739942-12740037)
chr4 (297-391)||(12748148-12748243)
chr4 (498-560)||(5370310-5370372)
chr4 (497-547)||(36463639-36463689)
chr4 (367-424)||(5396327-5396384)
chr4 (164-229)||(36770966-36771031)
chr4 (152-211)||(5137819-5137879)
chr4 (365-425)||(5143663-5143723)
chr4 (153-211)||(7124434-7124493)
chr4 (153-211)||(8395136-8395195)
chr4 (501-543)||(6375960-6376002)
chr4 (285-351)||(13992732-13992797)
chr4 (334-395)||(30000873-30000935)
chr4 (512-558)||(48142605-48142651)
chr4 (314-391)||(55085955-55086032)
chr4 (498-562)||(31495531-31495596)
chr4 (498-562)||(21704050-21704114)
[»] scaffold0014 (1 HSPs)
scaffold0014 (290-425)||(80871-81006)
[»] scaffold0286 (2 HSPs)
scaffold0286 (289-425)||(11002-11138)
scaffold0286 (498-552)||(22226-22280)
[»] scaffold0176 (1 HSPs)
scaffold0176 (278-424)||(17635-17781)
[»] scaffold0006 (5 HSPs)
scaffold0006 (365-491)||(6022-6148)
scaffold0006 (489-562)||(149319-149392)
scaffold0006 (367-425)||(2896-2954)
scaffold0006 (367-425)||(132916-132974)
scaffold0006 (313-402)||(149457-149543)
[»] scaffold0002 (2 HSPs)
scaffold0002 (313-415)||(434217-434321)
scaffold0002 (498-562)||(434415-434479)
[»] scaffold1519 (1 HSPs)
scaffold1519 (498-562)||(799-863)
[»] scaffold0016 (2 HSPs)
scaffold0016 (498-558)||(114472-114532)
scaffold0016 (311-415)||(114270-114374)
[»] scaffold0087 (2 HSPs)
scaffold0087 (367-425)||(43598-43656)
scaffold0087 (285-425)||(36387-36527)
[»] scaffold0491 (3 HSPs)
scaffold0491 (113-211)||(9304-9404)
scaffold0491 (498-562)||(8957-9022)
scaffold0491 (498-562)||(11383-11448)
[»] scaffold0140 (1 HSPs)
scaffold0140 (367-426)||(8054-8113)
[»] scaffold0098 (1 HSPs)
scaffold0098 (270-425)||(45601-45756)
[»] scaffold0466 (2 HSPs)
scaffold0466 (334-425)||(6816-6907)
scaffold0466 (290-330)||(6793-6833)
[»] scaffold1908 (1 HSPs)
scaffold1908 (111-184)||(1041-1114)
[»] scaffold0510 (1 HSPs)
scaffold0510 (367-415)||(1247-1295)
[»] scaffold0084 (1 HSPs)
scaffold0084 (312-351)||(25531-25570)


Alignment Details
Target: chr8 (Bit Score: 528; Significance: 0; HSPs: 70)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 528; E-Value: 0
Query Start/End: Original strand, 7 - 562
Target Start/End: Original strand, 10014539 - 10015094
Alignment:
Q  7 agtgagatgaatatcttccgctcggtgtaacatcatcaagtgacaaaataaattatcccaacattttttaacatcaagtttgtaatatctcccgttcggt 106  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10014539 agtgacatgaatatcttccgctcggtgtaacatcatcaagtgacaaaataaattatcccaacattttttaacatcaagtttgtaatatctcccgttcggt 10014638  T
Q  107 gtaactacttggtgtagttagatgcaagggaaaagaaaaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaaa 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10014639 gtaactacttggtgtagttagatgcaagggaaaagaaaaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaaa 10014738  T
Q  207 tgttgcaaagtgactcaaaaatgatttgagcatgttacaaatcatgacacgatttgtggaccatgacacaattttcctatgtcgtgagcatgtttttcag 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10014739 tgttgcaaagtgactcaaaaatgatttgagcatgttacaaatcatgacacgatttgtggaccatgacacaattttcctatgtcgtgagcatgtttttcag 10014838  T
Q  307 ggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgca 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10014839 ggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgca 10014938  T
Q  407 tcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttgaagagatgaaaacttggg 506  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||   |||||| |||||||||||||||||||||||||||||||||||||    
T  10014939 tcaatcgtgtcacgatttgaccaattgtgacacatttttgacaactgaagactgatatgtaagtgtttctttgcagattttgaagagatgaaaacttggg 10015038  T
Q  507 aaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10015039 aaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 10015094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 288 - 562
Target Start/End: Original strand, 30143003 - 30143288
Alignment:
Q  288 tcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtc 387  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| ||   |||||||||||| ||| |||| | || ||||  |||||||||||||||    
T  30143003 tcgtgagcatgttttgcagggtgtccaatcgtgacacgattttgggaaaatgtgacacgattttcggcttgctggacaagttttaaggataaggttggtc 30143102  T
Q  388 gtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagatttt 487  Q
    |||| |||||||||| ||| ||| |||||||| ||||| | ||  |||||||  ||||||||||||||| ||   || ||| || ||||||| |||||||    
T  30143103 gtactttgggtcgtacgcaccaaccgtgtcacgatttggcaaaacgtgacacgattttgacaactgaagactgctatataagtg-ttctttgtagatttt 30143201  T
Q  488 gaa-gaga---tga--------aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||| ||||   |||        |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  30143202 gaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggtt 30143288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 289 - 562
Target Start/End: Original strand, 43036085 - 43036369
Alignment:
Q  289 cgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcg 388  Q
    |||||||||||||| |||||| ||||||||||||||||||||||  || | |||||||||||| | | || | |||| |||| ||||||||||||| |||    
T  43036085 cgtgagcatgttttgcagggtgtccaatcgtgacacgattttggaaaaacgtgacacgattttcgacttgttgggcaagttttcaggataaggttgatcg 43036184  T
Q  389 taccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttg 488  Q
    |||||||| ||||| ||| ||| |||||||| |||||   ||  |||||||  |||||||| |||||| || | || ||| || ||||||||||||||||    
T  43036185 taccttggatcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgacagctgaagactgttatataagtg-ttctttgcagattttg 43036283  T
Q  489 aa-gaga---tga--------aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    || ||||   |||        |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  43036284 aatgagaggttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggtt 43036369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 246 - 490
Target Start/End: Complemental strand, 4743743 - 4743498
Alignment:
Q  246 aatcatgacacgatttgtggaccatgacacaattttcctatgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacac 345  Q
    |||| |||||||||| ||| | |||| ||||||||  | ||| ||||||||||||||  ||||| ||||||||||||||||||||| | || | ||||||    
T  4743743 aatcgtgacacgattagtgaagcatgtcacaatttcgcaatgccgtgagcatgttttgaagggtgtccaatcgtgacacgattttgaggaaacgtgacac 4743644  T
Q  346 gatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttt 444  Q
    |||||| | | ||||||||||| ||| ||||||||||||||||||||| ||||||||| ||||||| |||||||||||||| | ||  || |||| | ||    
T  4743643 gattttcgacttgcttggcacgtttttcaggataaggttggtcgtaccgtgggtcgtacgcatcaaccgtgtcacaatttggcaaaacgtcacacgtatt 4743544  T
Q  445 tgacaactgaagtctttaatgtaaatgtttctttgcagattttgaa 490  Q
    |||||  ||||| ||   || ||| |||||||||||||||||||||    
T  4743543 tgacagatgaagactgctatataagtgtttctttgcagattttgaa 4743498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 290 - 562
Target Start/End: Original strand, 15212448 - 15212732
Alignment:
Q  290 gtgagcatgttttt-cagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcg 388  Q
    ||||||||| |||| |||||| ||||||||||||||||||||||| || | |||||||||||| ||| ||||  ||| |||| |||||||||||||||||    
T  15212448 gtgagcatggttttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcggcttgctgagcaagttttcaggataaggttggtcg 15212547  T
Q  389 taccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttg 488  Q
    |||||||||||||| ||| ||| |||||||| ||||    || ||||||||  || ||||| |||||| ||   || ||| || |||||| |||||||||    
T  15212548 taccttgggtcgtacgcaccaaacgtgtcacgatttaggaaaatgtgacacgattgtgacagctgaagactgctatataagtg-ttctttacagattttg 15212646  T
Q  489 aa-gaga---tga--------aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    || ||||   |||        ||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||    
T  15212647 aaggagagcttgaagagagagaaacttgggaaatcaaatgaggtaactttagggttgagggtctttgattagagttctcttgggtt 15212732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 289 - 425
Target Start/End: Complemental strand, 42435715 - 42435579
Alignment:
Q  289 cgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcg 388  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| || | |||||||||||| | | ||||||||| |||| |||||||||||||||||    
T  42435715 cgtgagcatgttttgcagggtgtccaatcgtgacacgattttggggaaacgtgacacgattttcgtcttgcttggcaagttttcaggataaggttggtcg 42435616  T
Q  389 taccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||||||||||||| ||| ||| |||||||| |||||    
T  42435615 taccttgggtcgtacgcaccaaacgtgtcacgatttg 42435579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 285 - 562
Target Start/End: Original strand, 4731317 - 4731604
Alignment:
Q  285 atgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttg 384  Q
    ||||||||||| |||||| |||||| ||||||||||||||||||||||| || ||||||| |||||| ||| |||| | ||||||| ||| ||||| |||    
T  4731317 atgtcgtgagc-tgttttacagggtgtccaatcgtgacacgattttgggaaaacatgacatgattttcggcttgctggacacgttttcagaataagattg 4731415  T
Q  385 gtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagat 484  Q
    ||||||||||||| |||| ||| |||  ||||||| ||||| | ||  |||||||  |||||| | |||||| ||   || ||| || ||||||| ||||    
T  4731416 gtcgtaccttgggccgtaggcaccaactgtgtcacgatttggcaaaacgtgacacgattttgatagctgaagactactatataagtg-ttctttgtagat 4731514  T
Q  485 t------------ttgaagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |            |||||||||   |||||||  ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  4731515 tttgaaggagcggttgaagagagagaaacttgaaaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggtt 4731604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 300 - 415
Target Start/End: Complemental strand, 1746714 - 1746598
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggt 398  Q
    |||||||||  ||||||||||||||||||||||| |||| |||||||||||||||| |||| |||| | ||| ||||||||||||||||||||||||| |    
T  1746714 ttttcagggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggat 1746615  T
Q  399 cgtatgcatcaatcgtg 415  Q
    |||| ||||||||||||    
T  1746614 cgtacgcatcaatcgtg 1746598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 300 - 562
Target Start/End: Complemental strand, 12703134 - 12702860
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtc 399  Q
    ||||||| || ||||||||||||||||||||||| || | ||||||||||||  || ||||  ||| | || |||||||||||||||||||| |||||||    
T  12703134 ttttcagagtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcagcttgctaagcaagctttcaggataaggttggtcgtacattgggtc 12703035  T
Q  400 gtatgcatcaatcgtgtcacaatttgaccaatt-gtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttgaag-aga--- 494  Q
    ||| ||| ||  |||||||| |||||   ||   |||||||  ||||||||  |||||  | | |||||| |||| ||||||| ||||||||| |||       
T  12703034 gtacgcaccatacgtgtcacgatttgggaaaaacgtgacacgattttgacagttgaagattgttatgtaagtgtt-ctttgcatattttgaaggagagct 12702936  T
Q  495 tgaa--------aacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||        ||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||    
T  12702935 tgaagagagagaaacttgggaaatcaaaggaggtaaatttagggttgagggtctttgattagagttctcttgggtt 12702860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 300 - 415
Target Start/End: Complemental strand, 34254824 - 34254708
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggt 398  Q
    |||||||||  || |||| ||||||||||||||| |||| |||||||||||||||  |||| |||| | ||| |||||||||||||||||||||||||||    
T  34254824 ttttcagggcgtctaatcatgacacgattttgggaaatcgtgacacgatttttggattgctgggcaagattttcaggataaggttggtcgtaccttgggt 34254725  T
Q  399 cgtatgcatcaatcgtg 415  Q
    |||| ||||||||||||    
T  34254724 cgtacgcatcaatcgtg 34254708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 300 - 415
Target Start/End: Complemental strand, 34257000 - 34256884
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggt 398  Q
    |||||||||  ||||||||||||||||||||||| |||| |||||||||||||||| ||||  ||| | ||| ||||||||| ||||| |||||||||||    
T  34257000 ttttcagggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctgagcaagattttcaggataagattggttgtaccttgggt 34256901  T
Q  399 cgtatgcatcaatcgtg 415  Q
    |||| ||||||||||||    
T  34256900 cgtacgcatcaatcgtg 34256884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 290 - 424
Target Start/End: Original strand, 11383451 - 11383585
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgt 389  Q
    ||||||||| |||| ||||| |||||| |||||||||||||||| || | ||||||||||||  || |||| ||||  ||| || |||||||||||||||    
T  11383451 gtgagcatggtttttagggtgtccaattgtgacacgattttgggaaaacgtgacacgattttcagcttgctgggcaaattttcaagataaggttggtcgt 11383550  T
Q  390 accttgggtcgtatgcatcaatcgtgtcacaattt 424  Q
    || |||||||||| ||||||| |||||||| ||||    
T  11383551 actttgggtcgtacgcatcaaccgtgtcacgattt 11383585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 489 - 562
Target Start/End: Original strand, 6598845 - 6598918
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| ||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||    
T  6598845 aagagaggaaaacttgggaaatcaaaggagataactttagggttgagggtctttgattagagttctcttgggtt 6598918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 489 - 562
Target Start/End: Original strand, 6674298 - 6674371
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| ||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||    
T  6674298 aagagaggaaaacttgggaaatcaaaggagataactttagggttgagggtctttgattagagttctcttgggtt 6674371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 294 - 419
Target Start/End: Original strand, 22975983 - 22976108
Alignment:
Q  294 gcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtacct 393  Q
    ||||| |||||||||| ||||||||||||||||||||||| || | ||||||||||||  || |||||| || |||| |||||||||||| ||||||| |    
T  22975983 gcatggttttcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcagcttgcttgacaagttttcaggataaggtttgtcgtacat 22976082  T
Q  394 tgggtcgtatgcatcaatcgtgtcac 419  Q
    ||||||| | ||| ||| ||||||||    
T  22976083 tgggtcgcacgcaccaaacgtgtcac 22976108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 340 - 447
Target Start/End: Complemental strand, 3051609 - 3051502
Alignment:
Q  340 tgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcac-aatttgaccaattgtgaca 438  Q
    ||||||||||||||||||| ||| ||||||| || ||||||||||||||||| ||||||||||||||||||||||| ||| ||||||  |||| ||||||    
T  3051609 tgacacgatttttggcatgtttgacacgttttcaagataaggttggtcgtacattgggtcgtatgcatcaatcgtgacacgaatttg-gcaatcgtgaca 3051511  T
Q  439 catttttga 447  Q
    || ||||||    
T  3051510 caattttga 3051502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 300 - 415
Target Start/End: Original strand, 42497887 - 42498003
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggt 398  Q
    |||||||||  ||||||||||||||||||||||| |||  |||||||||| ||||| |||| |||| | ||| |||||||||||| ||||||||||||||    
T  42497887 ttttcagggcgtccaatcgtgacacgattttgggaaattgtgacacgattattggcttgctgggcaagattttcaggataaggttagtcgtaccttgggt 42497986  T
Q  399 cgtatgcatcaatcgtg 415  Q
    | || ||||||||||||    
T  42497987 cctacgcatcaatcgtg 42498003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 497 - 562
Target Start/End: Complemental strand, 3303957 - 3303892
Alignment:
Q  497 aaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||    
T  3303957 aaaacttgggaaatcaaaggaggtaactttacggttgagggtctttgattagggttctcttgggtt 3303892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 207 - 268
Target Start/End: Original strand, 10014242 - 10014303
Alignment:
Q  207 tgttgcaaagtgactcaaaaatgatttgagcatgttacaaatcatgacacgatttgtggacc 268  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  10014242 tgttgcaaagtgactcaaaaatgatttgagcatgttgcaaatcgtgacacgatttgtggacc 10014303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 489 - 562
Target Start/End: Original strand, 10929674 - 10929746
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| |||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||    
T  10929674 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttg-gggtctttgattagagttctcttgggtt 10929746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 300 - 424
Target Start/End: Complemental strand, 19945835 - 19945710
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggt 398  Q
    |||||||||  |||||||||||||||||||| || |||| |||||||||||||||| || | || | | ||| ||||||||||||| ||||||||||| |    
T  19945835 ttttcagggcgtccaatcgtgacacgattttaggaaatcgtgacacgatttttggcttgttggggaagattttcaggataaggttgatcgtaccttggat 19945736  T
Q  399 cgtatgcatcaatcgtgtcacaattt 424  Q
    |||| |||||||||||| ||| ||||    
T  19945735 cgtacgcatcaatcgtggcacgattt 19945710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 299 - 424
Target Start/End: Original strand, 27810970 - 27811095
Alignment:
Q  299 tttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggt 398  Q
    |||| |||||| ||||||||||||||||||||| | ||   |||||||||||| ||| |||| |||| |||| ||||||||||||||||||| |||||||    
T  27810970 ttttgcagggtgtccaatcgtgacacgattttgagaaaatgtgacacgattttcggcttgctgggcaagttttcaggataaggttggtcgtatcttgggt 27811069  T
Q  399 cgtatgcatcaatcgtgtcacaattt 424  Q
     ||| ||| ||| |||||||| ||||    
T  27811070 tgtacgcaccaaacgtgtcacgattt 27811095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 113 - 205
Target Start/End: Complemental strand, 34254993 - 34254900
Alignment:
Q  113 acttggtgtagttagatgcaagggaaaagaaaagg-agaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaa 205  Q
    ||||||||||||| ||||||||||||||||||||| ||| |||||||| || ||||||||| ||||||||||| |||  |||||||||||||||    
T  34254993 acttggtgtagttggatgcaagggaaaagaaaagggagattggtggttgatggttaaagtgacatcatcatcaatttgaagtcaaggtggagaa 34254900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 111 - 424
Target Start/End: Original strand, 4733309 - 4733622
Alignment:
Q  111 ctacttggtgtagttagatgcaagggaaaagaaaaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaaatgtt 210  Q
    ||||||||||||||| ||||  |||||||||||||||  | |||||||| |  ||||| ||||||||||||||| |||  || |||||||||||| ||||    
T  4733309 ctacttggtgtagttggatgtcagggaaaagaaaagggaattggtggttgaaggttaatgtggcatcatcatcaatttgaagccaaggtggagaa-tgtt 4733407  T
Q  211 gcaaagtgact-caaaaatga-tttga-gcatgttacaaatcatgacacgatttgtggaccatgacacaattttcctatgtcgtgagcatgtttttcagg 307  Q
    |   | || || ||||| ||| ||||| | | || |  |||||||||||||||||   ||  || ||| ||||  | ||||||||||| |||||| ||||    
T  4733408 gtgta-tgccttcaaaattgagtttgaagaaagtgaagaatcatgacacgatttggcaactgtgtcacgatttcgcaatgtcgtgagc-tgttttccagg 4733505  T
Q  308 gtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcat 407  Q
    || | ||||||||||||||||||||| || | |||||||||||| ||| | ||   ||||||| |||||||  ||| |||||||||||||||||| |||     
T  4733506 gtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcggctttctaaacacgttttcaggatacagtttgtcgtaccttgggtcgtacgcac 4733605  T
Q  408 caatcgtgtcacaattt 424  Q
    ||| |||||||| ||||    
T  4733606 caaccgtgtcacgattt 4733622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 4733691 - 4733755
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||    
T  4733691 aaacttgggaaatcaaaagaggtaactttagggttgagggtctttgattagagttctcttgggtt 4733755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 300 - 415
Target Start/End: Original strand, 31217929 - 31218045
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggt 398  Q
    |||||||||  |||||| |||||||||||||||| |||| |||||||||||||||| || | |||| | |||  |||||||||||||||||||||||| |    
T  31217929 ttttcagggcgtccaattgtgacacgattttgggaaatcgtgacacgatttttggcttgttgggcaagatttttaggataaggttggtcgtaccttggat 31218028  T
Q  399 cgtatgcatcaatcgtg 415  Q
    | || ||||||||||||    
T  31218029 catacgcatcaatcgtg 31218045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 33352032 - 33352096
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||    
T  33352032 aaacttgggaaatcaaagaaggtaactttagggttgagggtctttgattagagttctcttgggtt 33352096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 42498076 - 42498140
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  42498076 aaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctcttgggtt 42498140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 334 - 416
Target Start/End: Original strand, 4283035 - 4283117
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgt 416  Q
    ||||| |||||||||||| ||| |||| |||| |||| ||||||||||||||||||||||||||||||||||| ||| |||||    
T  4283035 caatcgtgacacgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtatgcaccaaacgtgt 4283117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 489 - 562
Target Start/End: Complemental strand, 1292758 - 1292685
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| |||||||||| |||||||| || ||||||||| |||||||||||||||||||||||||| |||||||    
T  1292758 aagagaggaaaacttggaaaatcaaatgaggtaactttagggttgagggtctttgattagagttcttttgggtt 1292685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 40220271 - 40220186
Alignment:
Q  144 aaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaaatgttgcaaagtgactcaaaaatg 229  Q
    |||||||||||||||| || |||||| | ||||||||||||||||||||||||||||||||| |||||  |  |||||||||||||    
T  40220271 aaggagaatggtggttgatggttaaattagcatcatcatcattttagagtcaaggtggagaattgttgagatatgactcaaaaatg 40220186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 489 - 562
Target Start/End: Complemental strand, 41365142 - 41365069
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| ||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||    
T  41365142 aagagaggaaaacttgtgaaatcaaatgaggtaactttagggttgagggtctttgattagagttcttttgggtt 41365069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 17982535 - 17982599
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| | ||||||| |||| |||||||||||||||||||||||||||||    
T  17982535 aaacttgggaaatcaaaggaagcaactttagggtttagggtctttgattagagttctcttgggtt 17982599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 31218139 - 31218203
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| | ||||||| |||| |||||||||||||||||||||||||||||    
T  31218139 aaacttgggaaatcaaaggaagcaactttagggtttagggtctttgattagagttctcttgggtt 31218203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 34254614 - 34254550
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| | ||||||| |||| |||||||||||||||||||||||||||||    
T  34254614 aaacttgggaaatcaaaggaggcaactttagggtttagggtctttgattagagttctcttgggtt 34254550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 314 - 389
Target Start/End: Original strand, 10929492 - 10929567
Alignment:
Q  314 aatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgt 389  Q
    ||||||||||||||||||  ||||| ||| ||||||||||||||||||| |||||||  |||||||||||||||||    
T  10929492 aatcgtgacacgattttgatcaatcgtgatacgatttttggcatgcttgacacgttttgaggataaggttggtcgt 10929567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 311 - 424
Target Start/End: Original strand, 40221230 - 40221343
Alignment:
Q  311 tccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaa 410  Q
    |||||||||| |||||||||||| || | ||||||||||||  || || | | ||||||| |||||||||||| ||||| |||||||||||| ||| |||    
T  40221230 tccaatcgtgtcacgattttgggaaaacgtgacacgattttcagcttgttggacacgttttcaggataaggtttgtcgtgccttgggtcgtacgcaccaa 40221329  T
Q  411 tcgtgtcacaattt 424  Q
     |||||||| ||||    
T  40221330 acgtgtcacgattt 40221343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 502 - 562
Target Start/End: Original strand, 27811164 - 27811224
Alignment:
Q  502 ttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||| |||| |||| ||||||||||||||||||||||||||||| ||||    
T  27811164 ttgggaaatcaaaggaggtaaatttagggttgagggtctttgattagagttctcttaggtt 27811224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 34256790 - 34256726
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| | ||||||| |||| ||||||||||||||||||| |||||||||    
T  34256790 aaacttgggaaatcaaaggaggcaactttagggtttagggtctttgattagagttatcttgggtt 34256726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 498 - 561
Target Start/End: Complemental strand, 19945646 - 19945583
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggt 561  Q
    |||||||||||||||||||| | ||||||| |||| || |||||||||||||||||||||||||    
T  19945646 aaacttgggaaatcaaaggaagcaactttagggtttagagtctttgattagagttctcttgggt 19945583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 500 - 558
Target Start/End: Complemental strand, 1345655 - 1345597
Alignment:
Q  500 acttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttg 558  Q
    |||||| ||||||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  1345655 acttggaaaatcaaaggatgtaactttagggttgagggtttttgattagagttctcttg 1345597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 334 - 415
Target Start/End: Original strand, 17982359 - 17982441
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtg 415  Q
    ||||| |||||||||||||||| |||| |||| | |||  |||||||||||||||||||||||| ||||| ||||||||||||    
T  17982359 caatcgtgacacgatttttggcttgctgggcaagatttttaggataaggttggtcgtaccttggatcgtacgcatcaatcgtg 17982441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 1746504 - 1746440
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| | ||||||| |||| |||||| ||||||||||||||||| ||||    
T  1746504 aaacttgggaaatcaaaggaagcaactttagggtttagggtccttgattagagttctctttggtt 1746440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 498 - 558
Target Start/End: Original strand, 5689153 - 5689213
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttg 558  Q
    ||||| ||||||||||||||  |||||||| |||||||||||||||||||| |||||||||    
T  5689153 aaactagggaaatcaaaggagataactttagggttgagggtctttgattagggttctcttg 5689213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 498 - 558
Target Start/End: Original strand, 40320949 - 40321009
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttg 558  Q
    ||||| |||||||||||||| ||||||||  |||||||||||||||||||| |||||||||    
T  40320949 aaactagggaaatcaaaggaggtaactttcgggttgagggtctttgattagggttctcttg 40321009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 44303736 - 44303800
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||| ||||||||||||   ||||||| |||| |||||||||||||||||||||||||||||    
T  44303736 aaacttgagaaatcaaaggaaacaactttagggtttagggtctttgattagagttctcttgggtt 44303800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 292 - 419
Target Start/End: Complemental strand, 1345873 - 1345745
Alignment:
Q  292 gagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgt-- 389  Q
    ||||||||| | |||||| | |||||||||||||||||  |  |||  |||||| |||||  || |||||| ||||||| ||||||||||||||||||      
T  1345873 gagcatgttctgcagggtgttcaatcgtgacacgatttgagaaaatg-tgacacaattttcagcttgcttgacacgttttcaggataaggttggtcgtac 1345775  T
Q  390 accttgggtcgtatgcatcaatcgtgtcac 419  Q
    ||||||||||||| ||||||| | ||||||    
T  1345774 accttgggtcgtacgcatcaaccatgtcac 1345745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 362 - 424
Target Start/End: Original strand, 4696259 - 4696321
Alignment:
Q  362 ggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaattt 424  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||| ||| |||| ||| ||||    
T  4696259 ggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgacacgattt 4696321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 334 - 411
Target Start/End: Original strand, 44303560 - 44303638
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggtcgtatgcatcaat 411  Q
    ||||| |||||||||||||||| |||| |||| | ||| ||||||||||||||||||||||||| || || ||||||||    
T  44303560 caatcgtgacacgatttttggcttgctgggcaagatttccaggataaggttggtcgtaccttggatcatacgcatcaat 44303638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 497 - 562
Target Start/End: Original strand, 4162381 - 4162446
Alignment:
Q  497 aaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||  ||||| ||| || ||||||||| |||||||||||||||||||| |||||||||||||    
T  4162381 aaaacttaagaaattaaaagaggtaactttagggttgagggtctttgattagggttctcttgggtt 4162446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 425
Target Start/End: Original strand, 19175314 - 19175427
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacgatttttgg-catgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaat 411  Q
    |||||||| |||||||||||| || | ||||| ||||||    | |||| || |||||| |||||||||||||||  |||||||||||||||||| ||||    
T  19175314 caatcgtgtcacgattttgggaaaacgtgacatgattttcaaacttgctgggtacgttttcaggataaggttggttataccttgggtcgtatgcaccaat 19175413  T
Q  412 cgtgtcacaatttg 425  Q
    |||| ||| |||||    
T  19175414 cgtgccacgatttg 19175427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 19492340 - 19492236
Alignment:
Q  121 tagttagatgcaagggaaaagaaaaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaaatgttgcaaagtgac 220  Q
    ||||| ||||||||| | | ||| || |||||||||||| || |||||  || ||||| |||||  ||||||||||||||||||||||||| ||| ||||    
T  19492340 tagttggatgcaaggaatatgaagagaagaatggtggttgatggttaat-tgacatcaccatcaaattagagtcaaggtggagaaatgttgaaaattgac 19492242  T
Q  221 tcaaaa 226  Q
    ||||||    
T  19492241 tcaaaa 19492236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 498 - 554
Target Start/End: Complemental strand, 19948607 - 19948551
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttct 554  Q
    |||||||||||||||||||| | ||||||| |||| || ||||||||||||||||||    
T  19948607 aaacttgggaaatcaaaggaagcaactttagggtttagagtctttgattagagttct 19948551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 498 - 558
Target Start/End: Original strand, 30291474 - 30291534
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttg 558  Q
    ||||| || ||||||||||| ||||||||| |||||| ||||||||||||| |||||||||    
T  30291474 aaactaggaaaatcaaaggaggtaactttagggttgatggtctttgattagggttctcttg 30291534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 26268827 - 26268766
Alignment:
Q  164 gttaaagtggcatcatcatcattttagagtcaaggtggagaaatgttgcaaagtgactcaaaa 226  Q
    |||||| |||||||||||  | |||||||||||||||||||||||||| ||||| ||||||||    
T  26268827 gttaaattggcatcatcactaatttagagtcaaggtggagaaatgttg-aaagttactcaaaa 26268766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 2627624 - 2627689
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagag-ttctcttgggtt 562  Q
    |||||||||||||||||||  |||||| || |||| || |||||||||||||| ||||||||||||    
T  2627624 aaacttgggaaatcaaagggagtaactctagggtttagagtctttgattagagcttctcttgggtt 2627689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 372 - 425
Target Start/End: Original strand, 5702121 - 5702174
Alignment:
Q  372 caggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    ||||||||||||||||||||||||| | ||| ||| |||||||||||| |||||    
T  5702121 caggataaggttggtcgtaccttggattgtacgcaccaatcgtgtcacgatttg 5702174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 41365500 - 41365408
Alignment:
Q  115 ttggtgtagttagatgcaagg--gaaaagaaaaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaa 205  Q
    ||||||||||| |||||||||  ||||  |||||| || ||||| || || ||||||||||||||||||||| |||  || ||||||||||||    
T  41365500 ttggtgtagttggatgcaaggaagaaagaaaaaggggattggtgattgatggttaaagtggcatcatcatcaatttgaaggcaaggtggagaa 41365408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 18141702 - 18141766
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||| || ||||| ||||| |||| |||| |||||||||||||||||||| |||||||| ||||    
T  18141702 aaactaggaaaatcgaaggaggtaattttagggttgagggtctttgattagggttctcttaggtt 18141766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 456
Target Start/End: Original strand, 23799221 - 23799301
Alignment:
Q  376 ataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaag 456  Q
    |||||||||||||||| |||||||||| ||| |||| ||||||| |||||  |||  |||||||  |||||||| ||||||    
T  23799221 ataaggttggtcgtacgttgggtcgtacgcaccaattgtgtcacgatttggacaaacgtgacacgattttgacagctgaag 23799301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 29796609 - 29796545
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||| |||||||||||| ||||||||| |||||||| ||||||   || |||||||||||||    
T  29796609 aaacttgagaaatcaaaggaggtaactttagggttgaggatctttggcgagggttctcttgggtt 29796545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 562
Target Start/End: Complemental strand, 18106363 - 18106300
Alignment:
Q  499 aacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||   ||||||| | | |||||||||| |||||| ||||||||||||    
T  18106363 aacttgggaaatcaaaggagagaactttaggatagagggtctttaattagatttctcttgggtt 18106300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 17849500 - 17849569
Alignment:
Q  161 attgttaaagtggcatcatcatcattttagagtcaaggtggagaaatgttgcaaagtgactcaaaaatgat 231  Q
    ||||||||| || ||||||||  | ||||||||||||||||||||  |||| |||||||||||||| ||||    
T  17849500 attgttaaattgacatcatcactaatttagagtcaaggtggagaatagttg-aaagtgactcaaaattgat 17849569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 415
Target Start/End: Complemental strand, 19948783 - 19948701
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtg 415  Q
    ||||| |||||||||||||||| |||| | || | |||  | |||||| ||||||||||||||| ||||| ||||||||||||    
T  19948783 caatcgtgacacgatttttggcttgctggacaagatttttatgataagtttggtcgtaccttggatcgtacgcatcaatcgtg 19948701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 33351842 - 33351888
Alignment:
Q  298 gtttttcagggtttccaatcgtgacacgattttgggcaatcatgaca 344  Q
    ||||| |||||| ||||||||||||||||||||||| || |||||||    
T  33351842 gttttgcagggtgtccaatcgtgacacgattttgggaaaacatgaca 33351888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 372 - 418
Target Start/End: Original strand, 33351895 - 33351941
Alignment:
Q  372 caggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtca 418  Q
    |||||||||||||||||||||||||||| || ||| ||| |||||||    
T  33351895 caggataaggttggtcgtaccttgggtcatacgcaccaaacgtgtca 33351941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 557
Target Start/End: Complemental strand, 41366879 - 41366841
Alignment:
Q  519 gtaactttatggttgagggtctttgattagagttctctt 557  Q
    ||||||||| |||||||| ||||||||||||||||||||    
T  41366879 gtaactttagggttgaggatctttgattagagttctctt 41366841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 562
Target Start/End: Original strand, 8153650 - 8153707
Alignment:
Q  505 ggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||||||||| |||| |||| ||||||| |||||||||||  ||||| |||||||    
T  8153650 ggaaatcaaaggaggtaattttaaggttgagagtctttgattaatgttcttttgggtt 8153707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 350
Target Start/End: Original strand, 2627428 - 2627464
Alignment:
Q  314 aatcgtgacacgattttgggcaatcatgacacgattt 350  Q
    |||||||||||||||||||| |||| |||||||||||    
T  2627428 aatcgtgacacgattttgggaaatcgtgacacgattt 2627464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 15949132 - 15949195
Alignment:
Q  164 gttaaagtggcatcatcatcattttagagtcaaggtggagaaatgttgcaaagtgactcaaaaat 228  Q
    |||||| ||| ||||||  || |||||||||||||||||||||||||| |||| |||| ||||||    
T  15949132 gttaaattggtatcatcgccaatttagagtcaaggtggagaaatgttg-aaagcgactaaaaaat 15949195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 3e-49; HSPs: 81)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 244 - 560
Target Start/End: Original strand, 6570210 - 6570538
Alignment:
Q  244 caaatcatgacacgatttgtggaccatgacacaattttcctatgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgac 343  Q
    |||||| |||||||||||||||||| || ||| ||||| |   | |||||||||| ||||  | |  |||||| ||||||| ||||| ||||||| ||||    
T  6570210 caaatcgtgacacgatttgtggaccgtgtcacgattttgcagggccgtgagcatggttttttgagggtccaattgtgacacaattttaggcaatcgtgac 6570309  T
Q  344 acgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacattt 443  Q
    ||||||||||||||||||| |||||||  |||||||||||| |||||||||||||| || ||||||| |||||||| ||||| ||||| ||||||| |||    
T  6570310 acgatttttggcatgcttgacacgtttttaggataaggttgatcgtaccttgggtcatacgcatcaaccgtgtcacgatttggccaatcgtgacacgttt 6570409  T
Q  444 ttgacaactgaagtctttaatgtaaatgtttctttgcagattttg------------aagagatgaaaacttgggaaatcaaaggacgtaactttatggt 531  Q
    ||||||||||||  || |  | ||| |||||||||||| ||||||            |||||  ||||||||| |||||||||||| ||||||||| | |    
T  6570410 ttgacaactgaaaactattgtttaagtgtttctttgcatattttgaaggagagcttaaagaggggaaaacttgagaaatcaaaggaggtaactttaggat 6570509  T
Q  532 tgagggtctttgattagagttctcttggg 560  Q
    |||| |||||||| ||| |||||||||||    
T  6570510 tgagtgtctttgactagggttctcttggg 6570538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 290 - 562
Target Start/End: Complemental strand, 47676642 - 47676358
Alignment:
Q  290 gtgagcatgttttt-cagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcg 388  Q
    ||||||||| |||| |||||| ||||||||||||||||||||||| || | |||||||||||| ||| |||| |||| |||| |||||||||||||||||    
T  47676642 gtgagcatggttttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcggcttgctgggcaagttttcaggataaggttggtcg 47676543  T
Q  389 taccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttg 488  Q
    |||||||||||||| ||| ||| |||||||| ||||    ||  |||||||| ||||||||  ||||| ||   || ||| || ||||||||||||||||    
T  47676542 taccttgggtcgtacgcaccaaacgtgtcacgattttggaaaacgtgacacaattttgacagttgaagactgatatataagtg-ttctttgcagattttg 47676444  T
Q  489 aagag----atga--------aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||     |||        ||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||    
T  47676443 aagaggagcttgaagagagagaaacttgggaaatcaaaggagataactttagggttgagggtctttgattagagttctcttgggtt 47676358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 290 - 562
Target Start/End: Complemental strand, 14070339 - 14070055
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgttta-caggataaggttggtcg 388  Q
    ||||||||| |||||||||| | ||||||||||||||||||||| || | |||||||||||| | | |||| |||| ||||  || ||||||||||||||    
T  14070339 gtgagcatggttttcagggtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgctaggcaagtttttcaagataaggttggtcg 14070240  T
Q  389 taccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagatt--- 485  Q
    |||||||||||||||||| ||| |||||||| |||||   ||  |||||||  |||||||| |||||| || | || ||| || |||||||| ||||       
T  14070239 taccttgggtcgtatgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgacagctgaagactgttatataagtg-ttctttgccgatttta 14070141  T
Q  486 ---------ttgaagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
             |||||||||   |||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||    
T  14070140 aaggagggcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggctgagggtctttgattagagttctcttgggtt 14070055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 290 - 562
Target Start/End: Complemental strand, 14380367 - 14380083
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgttta-caggataaggttggtcg 388  Q
    ||||||||| |||||||||| | ||||||||||||||||||||| || | |||||||||||| | | |||| |||| ||||  || ||||||||||||||    
T  14380367 gtgagcatggttttcagggtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgctaggcaagtttttcaagataaggttggtcg 14380268  T
Q  389 taccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagatt--- 485  Q
    |||||||||||||||||| ||| |||||||| |||||   ||  |||||||  |||||||| |||||| || | || ||| || |||||||| ||||       
T  14380267 taccttgggtcgtatgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgacagctgaagactgttatataagtg-ttctttgccgatttta 14380169  T
Q  486 ---------ttgaagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
             |||||||||   |||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||    
T  14380168 aaggagggcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggctgagggtctttgattagagttctcttgggtt 14380083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 290 - 562
Target Start/End: Original strand, 4585824 - 4586107
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgt 389  Q
    ||||||||||||| |||||| |||||||||||||| |||||||| || | ||||| |||||||||| || | || | |||| ||  ||||||||||||||    
T  4585824 gtgagcatgttttgcagggtgtccaatcgtgacactattttgggaaaacgtgacaagatttttggcttgttgggtaagttttcaatataaggttggtcgt 4585923  T
Q  390 accttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagatttt-- 487  Q
    ||||||||||||| ||| ||| | |||||| |||||   || ||||||||  |||||||| || ||| || | || ||| || |||||||||||||||      
T  4585924 accttgggtcgtacgcaccaaacatgtcacgatttgggaaaatgtgacacgattttgacagctaaagactgttatataagtg-ttctttgcagattttga 4586022  T
Q  488 ----------gaagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
              |||||||  ||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||    
T  4586023 aggagagttagaagagagaaaaacttgggaaatcaaaggatgtaactttagggttgaggctctttgattagagttctcttgggtt 4586107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 290 - 562
Target Start/End: Complemental strand, 47674449 - 47674165
Alignment:
Q  290 gtgagcatgttttt-cagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcg 388  Q
    ||||||||| |||| |||||| ||||||||||||||||||||||| || | |||||||||||| ||| |||| |||| |||| |||||||||||||||||    
T  47674449 gtgagcatggttttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcggcttgctgggcaagttttcaggataaggttggtcg 47674350  T
Q  389 taccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttg 488  Q
    |||||||||| ||| ||| ||| |||||||| ||||    ||   |||||   |||||||| |||||| ||   || ||  || ||||||||||||||||    
T  47674349 taccttgggttgtacgcaccaaacgtgtcacgattttggaaaacatgacatgattttgacagctgaagactgctatataggtg-ttctttgcagattttg 47674251  T
Q  489 aagag----atga--------aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||     |||        |||||||||||||||||||| ||||||| | |||||| |||||||||||||||||||||||||||    
T  47674250 aagaggagcttgaagagagagaaacttgggaaatcaaaggaggtaacttcaaggttgaaggtctttgattagagttctcttgggtt 47674165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 334 - 562
Target Start/End: Original strand, 1113363 - 1113603
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattg 433  Q
    ||||| |||||||||||| ||| || | ||||  ||| ||||||||||||||||||||||||||||||| ||| ||| ||||||||   ||| | ||  |    
T  1113363 caatcgtgacacgattttcggcctgatgggcaaattttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgtattggcaaaacg 1113462  T
Q  434 tgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttgaaga-------gatga-----aaacttgggaaatcaaaggacgta 521  Q
    ||||||  |||||||| |||||  || | || ||| ||||||| |||||||||||||||       || ||     |||||||||||||||||||| |||    
T  1113463 tgacacgattttgacagctgaatactgttatataagtgtttctgtgcagattttgaagaagaggttgaagagagagaaacttgggaaatcaaaggaagta 1113562  T
Q  522 actttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  1113563 actttagggttgagggtctttgattagagttctcttgggtt 1113603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 298 - 562
Target Start/End: Original strand, 18126316 - 18126590
Alignment:
Q  298 gtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttggg 397  Q
    ||||| |||||| |||||||||| |||||||||||  || | ||| |||||||| ||| || | |||| |||| |||||||| |||||||||||||||||    
T  18126316 gttttgcagggtgtccaatcgtg-cacgattttggaaaaacgtgatacgattttcggcttgttgggcaagttttcaggataatgttggtcgtaccttggg 18126414  T
Q  398 tcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttgaaga-ga-- 494  Q
    ||||| ||| ||| |||||||| ||||||  ||  |||||||  |||||||| || ||| ||   || ||| |||| |||||||||||||||||| ||      
T  18126415 tcgtacgcaccaaacgtgtcacgatttgagaaaacgtgacacgattttgacagctaaagactgatatataagtgtt-ctttgcagattttgaagaagagc 18126513  T
Q  495 -tgaa--------aacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
     ||||        ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||    
T  18126514 ttgaatagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcatgggtt 18126590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 311 - 559
Target Start/End: Original strand, 26416997 - 26417259
Alignment:
Q  311 tccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaa 410  Q
    |||||| |||||||||||||||| ||   ||||||||||||| |  || | | || |||| |||| |||||||||||||||||||||||||| ||| |||    
T  26416997 tccaattgtgacacgattttggggaaatgtgacacgatttttagtttgttggacaagttttcagggtaaggttggtcgtaccttgggtcgtacgcaccaa 26417096  T
Q  411 tcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtt----tctttgcagattttgaaga-------gatga-- 497  Q
     |||||||| ||||| ||||| |||||||  |||||||   ||||| ||   || ||| ||||    |||||||||||||||||||       || ||      
T  26417097 ccgtgtcacgatttggccaatcgtgacacgattttgacggttgaagactgctatataagtgttaatttctttgcagattttgaagaagagcttgaagaga 26417196  T
Q  498 -aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgg 559  Q
     ||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  26417197 taaacttgagaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgg 26417259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 300 - 415
Target Start/End: Original strand, 4178447 - 4178563
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggt 398  Q
    |||||||||  ||||||||||||||||||||||| |||| |||||||||||||||| || | |||| | ||| ||||||||||||||||||||||||| |    
T  4178447 ttttcagggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgttaggcaagattttcaggataaggttggtcgtaccttggat 4178546  T
Q  399 cgtatgcatcaatcgtg 415  Q
    |||| ||||||||||||    
T  4178547 cgtacgcatcaatcgtg 4178563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 285 - 562
Target Start/End: Original strand, 48489089 - 48489377
Alignment:
Q  285 atgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttg 384  Q
    ||||||||||| |||||| |||||| | ||| ||||||||||||| ||| || | ||||||| |||||||| |||| |||| | || |||||||||||||    
T  48489089 atgtcgtgagc-tgttttgcagggtgttcaaccgtgacacgatttagggaaaacgtgacacggtttttggcttgctgggcatgcttccaggataaggttg 48489187  T
Q  385 gtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagat 484  Q
    ||| |||||||||| ||| ||| |||||||||||| ||||| | ||  ||||||   ||||||||  || ||  |   || ||| ||||  | |||||||    
T  48489188 gtcataccttgggttgtacgcaccaatcgtgtcacgatttggcaaaacgtgacatgattttgacagttgcagggtactatttaagtgttcttgtgcagat 48489287  T
Q  485 tttgaaga-------gatga-----aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||||       || ||     |||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||    
T  48489288 tttgaagaagagattgaagatagagaaacttgggaaatcaaaggaggtaactttagggttgatggtctttgattagagttctcttgggtt 48489377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 489 - 562
Target Start/End: Complemental strand, 38671517 - 38671444
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  38671517 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggtt 38671444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 251 - 439
Target Start/End: Complemental strand, 6360673 - 6360486
Alignment:
Q  251 tgacacgatttgtggaccatgacacaattttcctatgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgattt 350  Q
    |||||||||||||| | | || | ||||||| | |||||| |||| |||||| ||||||  ||||| |||||||||||||||| || | |||||||||||    
T  6360673 tgacacgatttgtgaagcgtgtcgcaattttgcaatgtcgagagc-tgttttgcagggtgcccaattgtgacacgattttggggaaacgtgacacgattt 6360575  T
Q  351 ttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacac 439  Q
    | ||| || | |||| |||| |||||||| |||||||||| ||||||||||| ||| ||| |||||||| |||||   |||||||||||    
T  6360574 tcggcttgttgggcaagttttcaggataatgttggtcgtatcttgggtcgtacgcaccaaacgtgtcacgatttgggaaattgtgacac 6360486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 300 - 415
Target Start/End: Original strand, 23554712 - 23554828
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggt 398  Q
    |||||||||| ||||||||||||||||||||||| || | |||||||||||| | | |||| |||| | ||| |||||||||||||||||||| ||||||    
T  23554712 ttttcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgctgggcaagtttttcaggataaggttggtcgtacattgggt 23554811  T
Q  399 cgtatgcatcaatcgtg 415  Q
    |||| ||||||||||||    
T  23554812 cgtacgcatcaatcgtg 23554828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 297 - 419
Target Start/End: Original strand, 27347594 - 27347715
Alignment:
Q  297 tgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgg 396  Q
    |||||| ||||||  |||||||||||||||||||||| || | ||||| |||||| ||| |||| |||| |||| |||||||||||||||||||||||||    
T  27347594 tgttttgcagggtgcccaatcgtgacacgattttgggaaaac-tgacatgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgg 27347692  T
Q  397 gtcgtatgcatcaatcgtgtcac 419  Q
    |||||| ||| ||| ||||||||    
T  27347693 gtcgtacgcaccaaacgtgtcac 27347715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 313 - 491
Target Start/End: Original strand, 33332032 - 33332210
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatc 412  Q
    |||| ||| |||||||||||  || | ||||||||||||   | |||| ||||| ||| || |||||||||||||||||||||||||||| ||| |||||    
T  33332032 caattgtgtcacgattttggaaaaacgtgacacgattttcaacttgctgggcacattttcaagataaggttggtcgtaccttgggtcgtacgcaccaatc 33332131  T
Q  413 gtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttgaag 491  Q
    ||||||| |||||  ||||||||||||  ||||||||  ||||| ||   || | | ||||||||||||||||||||||    
T  33332132 gtgtcacgatttggacaattgtgacacgattttgacagttgaagactgctatattagtgtttctttgcagattttgaag 33332210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 48491083 - 48491177
Alignment:
Q  111 ctacttggtgtagttagatgcaagggaaaagaaaaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaa 205  Q
    ||||||||||||||| |||||||||||||||||||||  | |||||||| || ||||||||||||||||||||| |||  |||||||||||||||    
T  48491083 ctacttggtgtagttggatgcaagggaaaagaaaagggaattggtggttgatggttaaagtggcatcatcatcaatttgaagtcaaggtggagaa 48491177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 334 - 562
Target Start/End: Complemental strand, 2761763 - 2761524
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattg 433  Q
    ||||| ||||||||||||  || |||| |||| |||| ||||||||| ||||||||||||||||||||| ||| ||| |||||||| |||||   ||  |    
T  2761763 caatcgtgacacgattttcagcttgctgggcaagttttcaggataagattggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacg 2761664  T
Q  434 tgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttgaa-gaga---tga--------aaacttgggaaatcaaaggacgta 521  Q
    ||||||  |||||||| |||||| ||   || ||| || |||||||||||||||||| ||||   |||        |||||||||||||||||||| |||    
T  2761663 tgacacgattttgacagctgaagactgctatataagtg-ttctttgcagattttgaaggagagcttgaagagagataaacttgggaaatcaaaggaggta 2761565  T
Q  522 actttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| |||||| | | |||||||||||||||||||||||    
T  2761564 actttagggttgatgatatttgattagagttctcttgggtt 2761524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 314 - 491
Target Start/End: Complemental strand, 4539032 - 4538855
Alignment:
Q  314 aatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcg 413  Q
    |||||||||||||||||||| || | |||||||||||| ||  ||||  ||| |||| ||||| ||||||||||||||||||| ||||| ||| ||| ||    
T  4539032 aatcgtgacacgattttgggaaaacgtgacacgattttcggtttgctaagcaagttttcaggacaaggttggtcgtaccttggatcgtacgcaccaaacg 4538933  T
Q  414 tgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttgaag 491  Q
    |||||| ||||| | || | ||||||  |||||||| || ||| ||   || ||| ||||||||||||||||||||||    
T  4538932 tgtcacgatttggcaaaatatgacacgattttgacagctaaagactgctatataagtgtttctttgcagattttgaag 4538855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 300 - 415
Target Start/End: Original strand, 19495642 - 19495759
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgattttt-ggcatgcttggcacg-tttacaggataaggttggtcgtaccttggg 397  Q
    |||||||||| |||||||||||||| |||||||| || | || |||||||||| ||| |||| |||| | ||| ||||||||||||||||||||||||||    
T  19495642 ttttcagggtgtccaatcgtgacacaattttgggaaaacgtgccacgattttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggg 19495741  T
Q  398 tcgtatgcatcaatcgtg 415  Q
    ||||| ||||||||||||    
T  19495742 tcgtacgcatcaatcgtg 19495759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 290 - 439
Target Start/End: Complemental strand, 32358559 - 32358410
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgt 389  Q
    ||||||||| |||||||||| ||||||||||| ||||||||||| || | |||||| |||||  || |||| ||||||||| |||||||| |||| ||||    
T  32358559 gtgagcatggttttcagggtatccaatcgtgatacgattttgggaaaacgtgacacaattttcagcttgctgggcacgttttcaggataaagttgatcgt 32358460  T
Q  390 accttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacac 439  Q
    ||||||| ||||| ||| ||| |||||||  |||||   |||||||||||    
T  32358459 accttggatcgtacgcaccaaacgtgtcatgatttggaaaattgtgacac 32358410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 314 - 425
Target Start/End: Original strand, 2647280 - 2647391
Alignment:
Q  314 aatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcg 413  Q
    ||||||| |||||||||||| || | ||||| ||||||   | |||| ||||||||| ||||||||||||||||||||||||||||||| ||| ||||||    
T  2647280 aatcgtgtcacgattttgggaaaacgtgacatgattttcaacttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcg 2647379  T
Q  414 tgtcacaatttg 425  Q
    |||||| |||||    
T  2647380 tgtcacgatttg 2647391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 424
Target Start/End: Original strand, 2389737 - 2389871
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgt 389  Q
    ||||||||| |||| ||||| ||||||||||||||||||||| | ||   ||||||||||||  || |||| || |||||| ||||||||||||||||||    
T  2389737 gtgagcatggtttttagggtgtccaatcgtgacacgattttgagaaaatgtgacacgattttcagcttgctgggaacgttttcaggataaggttggtcgt 2389836  T
Q  390 accttgggtcgtatgcatcaatcgtgtcacaattt 424  Q
    ||||||| |||||  || ||| |||||||| ||||    
T  2389837 accttggatcgtacacaccaaacgtgtcacgattt 2389871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 311 - 424
Target Start/End: Original strand, 43863945 - 43864058
Alignment:
Q  311 tccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaa 410  Q
    ||||||||||||||||||||||| || | |||||||||||| ||  || | || | |||| ||||||||||||||||||||||||||||||| ||| |||    
T  43863945 tccaatcgtgacacgattttgggaaaacgtgacacgattttcggtttgttaggaaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaa 43864044  T
Q  411 tcgtgtcacaattt 424  Q
     |||| ||||||||    
T  43864045 acgtgacacaattt 43864058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 30025018 - 30024954
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||    
T  30025018 aaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttaggtt 30024954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 43864126 - 43864190
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  43864126 aaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctcttgggtt 43864190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 497 - 559
Target Start/End: Complemental strand, 496270 - 496208
Alignment:
Q  497 aaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgg 559  Q
    |||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  496270 aaaacttgggaaatcaaatgaggtaactttaaggttgagggtctttgattagagttctcttgg 496208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 489 - 562
Target Start/End: Original strand, 25615736 - 25615809
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| |||||||| |||||||||||||  |||||||| |||| |||||||||||||||||||||||||||||    
T  25615736 aagagaggaaaacttaggaaatcaaaggagttaactttaaggttaagggtctttgattagagttctcttgggtt 25615809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 334 - 491
Target Start/End: Original strand, 46515911 - 46516067
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattg 433  Q
    ||||| || ||||||||||||| || | ||||||||| ||||||||||||||||  ||||||||||||||||| ||| | |||||| ||||| | ||  |    
T  46515911 caatcgtgtcacgatttttggcttgttgggcacgttttcaggataaggttggtcacaccttgggtcgtatgcaccaagcatgtcacgatttggcaaaacg 46516010  T
Q  434 tgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttgaag 491  Q
    ||||||  |||||||| |||||| ||   || ||| || |||||||||||||||||||    
T  46516011 tgacacgattttgacagctgaagactgctatataagtg-ttctttgcagattttgaag 46516067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 19502060 - 19502124
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||| ||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||    
T  19502060 aaacttgagaaatcaaatgaggtaactttagggttgagggtctttgattagagttctcttgggtt 19502124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 24515046 - 24514982
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| | ||||||| |||| |||||||||||||||||||||||||||||    
T  24515046 aaacttgggaaatcaaaggaagcaactttagggtttagggtctttgattagagttctcttgggtt 24514982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 48491461 - 48491525
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||  ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  48491461 aaacttgataaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggtt 48491525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 489 - 560
Target Start/End: Complemental strand, 31105688 - 31105617
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttggg 560  Q
    |||||| ||||||||| |||||||||||| ||||||||| ||||||||||||||||||| |||| |||||||    
T  31105688 aagagaggaaaacttgagaaatcaaaggaggtaactttagggttgagggtctttgattatagttatcttggg 31105617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 144 - 230
Target Start/End: Complemental strand, 4509474 - 4509388
Alignment:
Q  144 aaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaaatgttgcaaagtgactcaaaaatga 230  Q
    |||||||||||||||| || |||||| |  |||||||||||||||||||||||||||||||| |||||  | ||| |||||||||||    
T  4509474 aaggagaatggtggttgatggttaaattaacatcatcatcattttagagtcaaggtggagaattgttgagatgtggctcaaaaatga 4509388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 144 - 230
Target Start/End: Complemental strand, 4511316 - 4511230
Alignment:
Q  144 aaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaaatgttgcaaagtgactcaaaaatga 230  Q
    |||||||||||||||| || |||||| |  |||||||||||||||||||||||||||||||| |||||  | ||| |||||||||||    
T  4511316 aaggagaatggtggttgatggttaaattaacatcatcatcattttagagtcaaggtggagaattgttgagatgtggctcaaaaatga 4511230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 144 - 230
Target Start/End: Original strand, 6431362 - 6431448
Alignment:
Q  144 aaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaaatgttgcaaagtgactcaaaaatga 230  Q
    |||||||||||||||| || |||||| | | ||||||||||||||||||||||||||||||| |||||  | ||| |||||||||||    
T  6431362 aaggagaatggtggttgatggttaaattagtatcatcatcattttagagtcaaggtggagaattgttgagatgtggctcaaaaatga 6431448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 497 - 558
Target Start/End: Complemental strand, 12098159 - 12098098
Alignment:
Q  497 aaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttg 558  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||| |||||    
T  12098159 aaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagggttttcttg 12098098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 485 - 562
Target Start/End: Original strand, 29990924 - 29991001
Alignment:
Q  485 tttgaagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||||||   ||||||||||||||||||||   ||||||| |||| |||||||||||||||||||||||||||||    
T  29990924 tttgaagagagagaaacttgggaaatcaaaggagacaactttagggtttagggtctttgattagagttctcttgggtt 29991001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 4178657 - 4178721
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||| |||||||||||| | ||||||| |||| |||||||||||||||||||||||||||||    
T  4178657 aaacttgagaaatcaaaggaagcaactttagggtttagggtctttgattagagttctcttgggtt 4178721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 4538826 - 4538762
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| |||| |||| ||||||| ||||||||||||| ||||||||||||    
T  4538826 aaacttgggaaatcaaaggaggtaattttaaggttgagagtctttgattagaattctcttgggtt 4538762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 558
Target Start/End: Original strand, 23554922 - 23554982
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttg 558  Q
    |||||||||||||||||||| ||||||| | |||||| |||||||||||||||||||||||    
T  23554922 aaacttgggaaatcaaaggaggtaacttcagggttgaaggtctttgattagagttctcttg 23554982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 31733255 - 31733191
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||| ||||||||| || |||||||||  |||||||||||||||||||||||||||||||||    
T  31733255 aaacttgagaaatcaaaagaggtaactttagagttgagggtctttgattagagttctcttgggtt 31733191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 558
Target Start/End: Complemental strand, 41317733 - 41317673
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttg 558  Q
    ||||| |||||||||||||| ||||||||| |||||||||||||||||||| |||||||||    
T  41317733 aaactagggaaatcaaaggaggtaactttagggttgagggtctttgattagggttctcttg 41317673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 111 - 211
Target Start/End: Complemental strand, 47674628 - 47674529
Alignment:
Q  111 ctacttggtgtagttagatgcaagggaaaagaaaaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaaatgtt 210  Q
    ||||||||||||||| ||||||||| ||||||||||   | | ||||||  | ||||||||||||||||||||| |||  ||||||||||||||||||||    
T  47674628 ctacttggtgtagttggatgcaagg-aaaagaaaagataattagtggttggtggttaaagtggcatcatcatcaatttgaagtcaaggtggagaaatgtt 47674530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 334 - 415
Target Start/End: Complemental strand, 24515222 - 24515140
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtg 415  Q
    ||||| |||||| ||||||||| |||| |||| | ||| ||||||||||||||||||||||||| ||||| ||||||||||||    
T  24515222 caatcgtgacacaatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtg 24515140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 402
Target Start/End: Complemental strand, 30026481 - 30026393
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgta 402  Q
    ||||||||||| ||||||||| || | ||||||||||||  || |||  ||||||||| |||||||||||||||||||||||| ||||||    
T  30026481 caatcgtgacatgattttggggaaacgtgacacgattttcagcttgccgggcacgttt-caggataaggttggtcgtaccttgagtcgta 30026393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 4253816 - 4253752
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| ||||||||| |||||||||| |||| | || |||||||||||||    
T  4253816 aaacttgggaaatcaaaggaggtaactttagggttgagggtatttggtgagggttctcttgggtt 4253752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 365 - 425
Target Start/End: Complemental strand, 21983705 - 21983645
Alignment:
Q  365 acgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||||| ||||||||||||||||||||||||||||||| ||| |||| ||||||| |||||    
T  21983705 acgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaattgtgtcacgatttg 21983645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 415
Target Start/End: Original strand, 35853626 - 35853701
Alignment:
Q  341 gacacgatttttggcatgcttggcacgttta-caggataaggttggtcgtaccttgggtcgtatgcatcaatcgtg 415  Q
    ||||||||||||||| |||| |||| ||||  ||||||||||| ||||||||||||| ||||| ||||||||||||    
T  35853626 gacacgatttttggcttgctgggcaagtttttcaggataaggtcggtcgtaccttggatcgtacgcatcaatcgtg 35853701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 425
Target Start/End: Original strand, 48491285 - 48491376
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    ||||| |||||||||||| ||| || | |||||| || || ||| |||||||||||||||||||||||| ||| ||| |||||||| |||||    
T  48491285 caatcgtgacacgattttcggcttgttgggcacgctttcaagattaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacgatttg 48491376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 497 - 547
Target Start/End: Complemental strand, 36146709 - 36146659
Alignment:
Q  497 aaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgatta 547  Q
    ||||||||||||||||||||| |||||||||  ||||||||||||||||||    
T  36146709 aaaacttgggaaatcaaaggaggtaactttagtgttgagggtctttgatta 36146659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 367 - 425
Target Start/End: Original strand, 44847762 - 44847820
Alignment:
Q  367 gtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||| ||||||||||||||||||||||||||||||| | |||||||||| ||| |||||    
T  44847762 gttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtggcacgatttg 44847820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 290 - 426
Target Start/End: Complemental strand, 49092230 - 49092092
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttgg-catgcttggcacgttta-caggataaggttggtc 387  Q
    ||||||||| ||| ||||||   |||||||| |||||||||||| ||   |||||||||||| |  | |||| || ||||||  ||||||||||||||||    
T  49092230 gtgagcatggtttgcagggtgctcaatcgtgtcacgattttgggaaaatgtgacacgattttcgaacttgctgggtacgtttttcaggataaggttggtc 49092131  T
Q  388 gtaccttgggtcgtatgcatcaatcgtgtcacaatttga 426  Q
    ||||||||| ||||||||| |||| ||| ||| ||||||    
T  49092130 gtaccttggatcgtatgcaccaatagtgacacgatttga 49092092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 424
Target Start/End: Complemental strand, 496446 - 496365
Alignment:
Q  343 cacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaattt 424  Q
    |||| ||||||||||||||| ||| ||| ||||||||||||||   ||||||| |||||| ||||||| |||||||| ||||    
T  496446 cacggtttttggcatgcttgacacattttcaggataaggttggatttaccttgagtcgtacgcatcaaccgtgtcacgattt 496365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 2479796 - 2479751
Alignment:
Q  367 gtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatc 412  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||    
T  2479796 gttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatc 2479751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 501 - 562
Target Start/End: Original strand, 23343859 - 23343920
Alignment:
Q  501 cttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||||||||||||| ||||||||| ||| ||| |||||||||||| |||||||| ||||    
T  23343859 cttgggaaatcaaaggatgtaactttagggtcgagagtctttgattagggttctcttaggtt 23343920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 497 - 562
Target Start/End: Complemental strand, 24526184 - 24526119
Alignment:
Q  497 aaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| ||||||||||||||  |||||||| |||||||||||||||||||  |||||||| ||||    
T  24526184 aaaactagggaaatcaaaggagataactttagggttgagggtctttgattatggttctcttaggtt 24526119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 489 - 562
Target Start/End: Original strand, 31518668 - 31518741
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| |||||||| |||||||||||||  |||||||| |||| ||||||||||||||  ||||| |||||||    
T  31518668 aagagaggaaaactttggaaatcaaaggagataactttagggttaagggtctttgattatggttcttttgggtt 31518741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 39731258 - 39731323
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagag-ttctcttgggtt 562  Q
    |||||||||||||||||||  |||||| || |||| ||||||||||||||||| ||||||||||||    
T  39731258 aaacttgggaaatcaaagggagtaactctagggtttagggtctttgattagagcttctcttgggtt 39731323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 497 - 562
Target Start/End: Complemental strand, 41649296 - 41649232
Alignment:
Q  497 aaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||||  |||||||| |||| | ||||||| |||||||||||||||||||    
T  41649296 aaaacttgggaaatcaaaggagttaactttagggtt-aaggtcttttattagagttctcttgggtt 41649232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 164 - 229
Target Start/End: Complemental strand, 44011330 - 44011265
Alignment:
Q  164 gttaaagtggcatcatcatcattttagagtcaaggtggagaaatgttgcaaagtgactcaaaaatg 229  Q
    |||||| || ||||||||  |||||||||||||||||||||| | ||| |||||||||||||||||    
T  44011330 gttaaattgacatcatcactattttagagtcaaggtggagaattattgaaaagtgactcaaaaatg 44011265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 415
Target Start/End: Complemental strand, 3050603 - 3050523
Alignment:
Q  335 aatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtg 415  Q
    |||||||||||||||| ||||| || || |||  || | ||||||  ||||||||||||||||||||| ||||||||||||    
T  3050603 aatcatgacacgatttgtggcaggcatgacactatttctggataatattggtcgtaccttgggtcgtacgcatcaatcgtg 3050523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 35853797 - 35853861
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| ||||||||||||  | ||||||| |||| ||||||||||||| |||||||||||||||    
T  35853797 aaacttaggaaatcaaaggtagcaactttagggtttagggtctttgatttgagttctcttgggtt 35853861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 506 - 562
Target Start/End: Complemental strand, 36574794 - 36574738
Alignment:
Q  506 gaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||| ||||||||| |||||| |||||||||| || |||||||||||||    
T  36574794 gaaatcaaaggaggtaactttagggttgacggtctttgatgagggttctcttgggtt 36574738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 313 - 424
Target Start/End: Original strand, 4796251 - 4796362
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatc 412  Q
    ||||||||||||||||||||  || | ||||||||||||   | || | ||||||||| |||||||  |||||||||||||||| ||||| ||| |||      
T  4796251 caatcgtgacacgattttggaaaaacgtgacacgattttcaacttgatgggcacgttttcaggatagagttggtcgtaccttggatcgtacgcaccaaat 4796350  T
Q  413 gtgtcacaattt 424  Q
    || |||||||||    
T  4796351 gtatcacaattt 4796362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 21989370 - 21989317
Alignment:
Q  365 acgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtca 418  Q
    |||||| ||||||||||||| |||||||||||||| || ||| |||||||||||    
T  21989370 acgttttcaggataaggttgatcgtaccttgggtcatacgcagcaatcgtgtca 21989317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 498 - 559
Target Start/End: Complemental strand, 23565346 - 23565287
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgg 559  Q
    |||||||||| ||||||||| ||||||||| |||| ||||||||||||||| ||||||||||    
T  23565346 aaacttgggatatcaaaggaggtaacttta-ggttaagggtctttgattag-gttctcttgg 23565287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 48408684 - 48408749
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagag-ttctcttgggtt 562  Q
    |||||||||||||||||||  | |||| || |||| ||||||||||||||||| ||||||||||||    
T  48408684 aaacttgggaaatcaaagggagcaactctagggtttagggtctttgattagagtttctcttgggtt 48408749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 498 - 558
Target Start/End: Original strand, 8153211 - 8153271
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttg 558  Q
    ||||| || ||||||||||| ||||||||| ||||| |||||||||||||| || ||||||    
T  8153211 aaactaggaaaatcaaaggaggtaactttaaggttgggggtctttgattagggtcctcttg 8153271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 6592976 - 6592917
Alignment:
Q  153 ggtggttcattgttaaagtggcatcatcatcattttaga-gtcaaggtggagaaatgttg 211  Q
    ||||||| || |||||||||||||||||| ||  ||||| ||||||||||||||||||||    
T  6592976 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg 6592917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 18390617 - 18390558
Alignment:
Q  153 ggtggttcattgttaaagtggcatcatcatcattttaga-gtcaaggtggagaaatgttg 211  Q
    ||||||| || |||||||||||||||||| ||  ||||| ||||||||||||||||||||    
T  18390617 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg 18390558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 4175435 - 4175357
Alignment:
Q  153 ggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaaatgttgcaaagtgactcaaaaatgat 231  Q
    ||||||| || |||||| || ||||||||| |||||| |||||  ||||||||||||||  || |||||||||| ||||    
T  4175435 ggtggttaatggttaaattgacatcatcattattttaaagtcattgtggagaaatgttgataattgactcaaaattgat 4175357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 425
Target Start/End: Complemental strand, 47264103 - 47264045
Alignment:
Q  367 gtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||| ||||||||||||||||||| ||||||||||| | ||||||| || ||| |||||    
T  47264103 gttttcaggataaggttggtcgtatcttgggtcgtacgtatcaatcttgacacgatttg 47264045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 425
Target Start/End: Complemental strand, 79845 - 79792
Alignment:
Q  372 caggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||||||||||||||||||| ||||||| |||||| |||||  ||||| |||||    
T  79845 caggataaggttggtcgtacattgggtcatatgcaccaatcacgtcacgatttg 79792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 543
Target Start/End: Original strand, 5817048 - 5817093
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttg 543  Q
    |||||||||||  ||||||| ||||||||||||||||| |||||||    
T  5817048 aaacttgggaatacaaaggaggtaactttatggttgagtgtctttg 5817093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 351
Target Start/End: Complemental strand, 25767436 - 25767399
Alignment:
Q  314 aatcgtgacacgattttgggcaatcatgacacgatttt 351  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  25767436 aatcgtgacacgattttgggaaatcgtgacacgatttt 25767399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 26214631 - 26214672
Alignment:
Q  164 gttaaagtggcatcatcatcattttagagtcaaggtggagaa 205  Q
    |||||| ||||||||| |||| ||||||||||||||||||||    
T  26214631 gttaaattggcatcattatcaatttagagtcaaggtggagaa 26214672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 48491258 - 48491302
Alignment:
Q  285 atgtcgtgagcatgtttttcagggtttccaatcgtgacacgatttt 330  Q
    ||||||||||| |||||| |||||| ||||||||||||||||||||    
T  48491258 atgtcgtgagc-tgttttgcagggtgtccaatcgtgacacgatttt 48491302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 351
Target Start/End: Complemental strand, 48600044 - 48599940
Alignment:
Q  246 aatcatgacacgatttgtggaccatgacacaattttcctatgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacac 345  Q
    |||| |||||||||||||| | | || ||| ||||| | |||||| |||| |||||| ||||||   |||||||||||||||| |||| || | ||||||    
T  48600044 aatcgtgacacgatttgtgaagcgtgtcacgattttgcaatgtcgagagc-tgttttgcagggtgcacaatcgtgacacgattatggggaaacgtgacac 48599946  T
Q  346 gatttt 351  Q
    ||||||    
T  48599945 gatttt 48599940  T

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Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 246 - 330
Target Start/End: Complemental strand, 2761829 - 2761746
Alignment:
Q  246 aatcatgacacgatttgtggaccatgacacaattttcctatgtcgtgagcatgtttttcagggtttccaatcgtgacacgatttt 330  Q
    |||| |||| ||||||||| | |||| ||| ||||| | |||||| |||| |||||| ||||||  |||||||||||||||||||    
T  2761829 aatcgtgacccgatttgtgaagcatgtcacgattttgcaatgtcgagagc-tgttttgcagggtgcccaatcgtgacacgatttt 2761746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 9189443 - 9189503
Alignment:
Q  151 atggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaaatgttg 211  Q
    ||||||||| || |||||| || ||||||||||| ||   |||||||||||||||||||||    
T  9189443 atggtggttgatggttaaactgacatcatcatcaattagaagtcaaggtggagaaatgttg 9189503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 3e-46; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 291 - 562
Target Start/End: Original strand, 13487869 - 13488149
Alignment:
Q  291 tgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgta 390  Q
    ||||||| |||||||||||   ||||||||||||||||||||| || ||   ||||||||| ||| |||| |||| |||| |||||||||||||||||||    
T  13487869 tgagcatatttttcagggtgctcaatcgtgacacgattttgggaaaacag--cacgattttcggcttgctgggcaagttttcaggataaggttggtcgta 13487966  T
Q  391 ccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttgaa 490  Q
    |||||||||||| ||| ||| |||||||| |||||   ||  |||||||| |||||||| |||||| || | || ||| ||||| |||||||||||||||    
T  13487967 ccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacaattttgacagctgaagactgttatataagtgttt-tttgcagattttgaa 13488065  T
Q  491 g-------agatga-----aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |       ||| ||     |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  13488066 ggagagctagaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggtt 13488149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 290 - 557
Target Start/End: Complemental strand, 42426741 - 42426462
Alignment:
Q  290 gtgagcatgttttt-cagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcg 388  Q
    ||||||||| |||| |||||| ||||||||||||||||||||||| || | |||||| ||||| ||  |||| |||| |||| |||||||||||||||||    
T  42426741 gtgagcatggttttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacaattttcggtttgctgggcaagttttcaggataaggttggtcg 42426642  T
Q  389 taccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttg 488  Q
    |||||||||||||| ||| ||| | |||||| |||||   ||  |||||||| |||||||| |||||| ||   || ||| || ||||||||||||||||    
T  42426641 taccttgggtcgtacgcaccaaacatgtcacgatttgggaaaacgtgacacaattttgacagctgaagactgctatataagtg-ttctttgcagattttg 42426543  T
Q  489 aa-gaga---tga--------aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctctt 557  Q
    || ||||   |||        |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  42426542 aaggagagcttgaaaagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctctt 42426462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 300 - 562
Target Start/End: Original strand, 13239425 - 13239698
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtc 399  Q
    |||| ||||| | ||||||||||| ||||||||| || | ||||||||| |||| | |||| | || |||| ||||||||||||||||||||||||||||    
T  13239425 tttttagggtgttcaatcgtgacaagattttgggtaaacgtgacacgatctttgacttgctggacaagttttcaggataaggttggtcgtaccttgggtc 13239524  T
Q  400 gtatgcatcaatcgtgtcacaatt--tgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttgaag-aga-- 494  Q
    ||| |||||||||||| ||| |||  ||   ||  |||||||| |||||||  |||||| ||   || ||| || ||||||||||||||||||| |||      
T  13239525 gtacgcatcaatcgtgacacgattgatg-gaaaacgtgacacaattttgac-gctgaagactgctatataagtg-ttctttgcagattttgaagtagagt 13239621  T
Q  495 -tga--------aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
     |||        |||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13239622 ttgaagagagagaaacttagaaaatcaaaggaggtaactttatggttgagggtctttgattagagttctcttgggtt 13239698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 290 - 415
Target Start/End: Original strand, 37438808 - 37438934
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcg 388  Q
    ||||||||| ||||||| || ||||||||||||| ||||||||| || | |||||||||||||||| || | |||| | ||| |||||||||||| ||||    
T  37438808 gtgagcatggttttcagagtgtccaatcgtgacatgattttgggaaaacgtgacacgatttttggcttgttgggcaagattttcaggataaggtttgtcg 37438907  T
Q  389 taccttgggtcgtatgcatcaatcgtg 415  Q
    |||||||||||||| ||||||||||||    
T  37438908 taccttgggtcgtacgcatcaatcgtg 37438934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 489 - 562
Target Start/End: Original strand, 31182846 - 31182919
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  31182846 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggtt 31182919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 290 - 561
Target Start/End: Original strand, 32636486 - 32636769
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgttta-caggataaggttggtcg 388  Q
    |||| |||||||| || ||| ||||||||||||||||||||||| || | || ||||||||| | | |||| |||| ||||  |||||||||||||||||    
T  32636486 gtgaacatgttttgcaaggtgtccaatcgtgacacgattttgggaaaacgtggcacgattttcgacttgctgggcaagtttttcaggataaggttggtcg 32636585  T
Q  389 taccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttg 488  Q
    ||||||||||| || ||| ||| |||||||| |||||   ||  ||||||   |||||||| |||||  ||   || ||| || ||||||||||||||||    
T  32636586 taccttgggtcttacgcaccaaacgtgtcacgatttgggaaaacgtgacatgattttgacagctgaaaactgctatataagtg-ttctttgcagattttg 32636684  T
Q  489 a------------agagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggt 561  Q
    |            |||||   ||||||| |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||    
T  32636685 aaggagagcttggagagagagaaacttgagaaatcaaaggaggtaactttagggttaagggtctttgattagagttctcttgggt 32636769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 291 - 425
Target Start/End: Original strand, 5057495 - 5057629
Alignment:
Q  291 tgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgta 390  Q
    |||||||  |||||||||| ||||||||||||||||||||||  || | |||||| ||||| | | || |  ||| |||| |||||||||||||||||||    
T  5057495 tgagcatagttttcagggtgtccaatcgtgacacgattttggtaaaacgtgacacaattttcgacttgttgagcaagttttcaggataaggttggtcgta 5057594  T
Q  391 ccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||| ||||||| ||||||| ||||||||||||||    
T  5057595 cctttggtcgtacgcatcaaccgtgtcacaatttg 5057629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 489 - 562
Target Start/End: Complemental strand, 5887711 - 5887638
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| |||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  5887711 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtatttgattagagttctcttgggtt 5887638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 489 - 562
Target Start/End: Original strand, 16451954 - 16452027
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| |||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||    
T  16451954 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttgaggatctttgattagagttctcttgggtt 16452027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 28750941 - 28750877
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  28750941 aaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggtt 28750877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 13487702 - 13487796
Alignment:
Q  111 ctacttggtgtagttagatgcaagggaaaagaaaaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaa 205  Q
    |||||||||||| || ||||||| |||||||||||| ||| |||||||| || ||||||||||||||||||||| |||  |||||||||||||||    
T  13487702 ctacttggtgtacttggatgcaaaggaaaagaaaagaagattggtggttgatggttaaagtggcatcatcatcaatttgaagtcaaggtggagaa 13487796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 374 - 549
Target Start/End: Complemental strand, 16650044 - 16649857
Alignment:
Q  374 ggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtt 473  Q
    ||||||||||||||||||||||| ||||| ||| ||| |||||||| ||||| | || |||||||   |||||||| || ||| ||   || ||| ||||    
T  16650044 ggataaggttggtcgtaccttggatcgtacgcaccaaccgtgtcacgatttggcaaaatgtgacatgattttgacagctaaagactactatataagtgtt 16649945  T
Q  474 tctttgcagattttgaa------------gagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattaga 549  Q
    |||||||||||||||||            |||| |||||||||||||||||||||| ||||||||| |||||| ||||||||||||||    
T  16649944 tctttgcagattttgaatgataggttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggttgatggtctttgattaga 16649857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 391
Target Start/End: Complemental strand, 42428924 - 42428822
Alignment:
Q  290 gtgagcatgttttt-cagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcg 388  Q
    ||||||||| |||| |||||| ||||||||||||||||||||||| || | |||||||||||||||| |||| |||| ||||  ||||||||||||||||    
T  42428924 gtgagcatggttttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgatttttggcttgctgggcaagtttttaggataaggttggtcg 42428825  T
Q  389 tac 391  Q
    |||    
T  42428824 tac 42428822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 296 - 449
Target Start/End: Complemental strand, 16651121 - 16650968
Alignment:
Q  296 atgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttg 395  Q
    ||||||||||||||   ||||| ||||||||||||||| || | ||||||||||| |  | || | || |||||| ||||||||||||||||||||||||    
T  16651121 atgtttttcagggtactcaatcatgacacgattttgggaaaacgtgacacgatttataacttgttgggtacgttttcaggataaggttggtcgtaccttg 16651022  T
Q  396 ggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgaca 449  Q
    | ||||| ||| ||| |||||||| ||||| | || ||||||||  ||||||||    
T  16651021 gatcgtacgcaccaaccgtgtcacgatttggcaaaatgtgacacgattttgaca 16650968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 39468835 - 39468771
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||    
T  39468835 aaacttgggaaatcaaaggaggtaactttagggttgagggtctttcattagagttctcttgggtt 39468771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 207 - 370
Target Start/End: Complemental strand, 3076210 - 3076045
Alignment:
Q  207 tgttgcaaagtgactcaaaaatgattt--gagcatgttacaaatcatgacacgatttgtggaccatgacacaattttcctatgtcgtgagcatgtttttc 304  Q
    ||||| || ||||||||||||||||||  ||  | ||| |||||| |||||||||||||| | | ||  || |||||||||||| |||||||||||||      
T  3076210 tgttgtaatgtgactcaaaaatgattttggaaaaagttgcaaatcgtgacacgatttgtgaagcgtgttacgattttcctatgttgtgagcatgttttct 3076111  T
Q  305 agggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgttt 370  Q
     | || | |||  |||||| |||||||||||| | |||||||||||||||||||||||| ||||||    
T  3076110 tgtgtgtacaaatgtgacaagattttgggcaaccgtgacacgatttttggcatgcttggtacgttt 3076045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 498 - 559
Target Start/End: Original strand, 537907 - 537968
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgg 559  Q
    |||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  537907 aaacttggaaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgg 537968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 497 - 562
Target Start/End: Complemental strand, 3075945 - 3075880
Alignment:
Q  497 aaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||| ||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  3075945 aaaactttggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctcttgggtt 3075880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 334 - 419
Target Start/End: Original strand, 19806113 - 19806198
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcac 419  Q
    ||||| |||||||||||| ||| |||| |||||||||  |||||||||||||||||||||||||||||| ||| ||| ||||||||    
T  19806113 caatcgtgacacgattttcggcttgctaggcacgtttttaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcac 19806198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 502 - 562
Target Start/End: Original strand, 533655 - 533715
Alignment:
Q  502 ttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||    
T  533655 ttgggaaatcaaaggaggtaactttagggttgggggtctttgattagagttctcttgggtt 533715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 535616 - 535700
Alignment:
Q  340 tgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaattt 424  Q
    |||||||||||| ||| |||| | || |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  535616 tgacacgattttcggcttgctggacaagttttcaggataaggttggtcgtaccttgggtcgtatgcaccaaacgtgtcacgattt 535700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 365 - 425
Target Start/End: Original strand, 12083812 - 12083872
Alignment:
Q  365 acgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  12083812 acgttttcaggataaggttggtcgtaccttgggtcgtatgcaccaatcgtgtcacgatttg 12083872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 30683206 - 30683142
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||||||||||| |||| |||| |||| ||||||||||||||||||||||||||||||||||    
T  30683206 aaacttgggaaatcagaggaggtaattttagggttgagggtctttgattagagttctcttgggtt 30683142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 36074330 - 36074266
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| | ||||||| |||| |||||||||||||||||||||||||||||    
T  36074330 aaacttgggaaatcaaaggaagcaactttagggtttagggtctttgattagagttctcttgggtt 36074266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 334 - 418
Target Start/End: Complemental strand, 39468993 - 39468909
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtca 418  Q
    ||||| |||||||||||| ||| |||| | |||||||  |||||||||||||||||||||||||||||||||| ||| |||||||    
T  39468993 caatcgtgacacgattttcggcttgctggacacgtttttaggataaggttggtcgtaccttgggtcgtatgcaccaaacgtgtca 39468909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 42428716 - 42428652
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||||||||||||||||  |||||||| |||||| |||||||||||||||||||||||||||    
T  42428716 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttctcttgggtt 42428652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 489 - 562
Target Start/End: Complemental strand, 8566242 - 8566168
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggt-tgagggtctttgattagagttctcttgggtt 562  Q
    |||||| ||||||||||||||||||| || ||||||||| ||  |||||||||||||||||||||||||||||||    
T  8566242 aagagaggaaaacttgggaaatcaaatgaggtaactttagggcatgagggtctttgattagagttctcttgggtt 8566168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 334 - 415
Target Start/End: Original strand, 25412468 - 25412550
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtg 415  Q
    ||||| |||||||||||||||| |||| |||| | ||| ||||||||||||||||||||||||| ||||| ||||||||||||    
T  25412468 caatcgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtg 25412550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 29722055 - 29722156
Alignment:
Q  113 acttggtgtagttagatgcaagggaaaagaaaagg--agaatggtggttcattgttaaagtggcatcatcatcattttag-agtcaaggtggagaaatgt 209  Q
    ||||||| ||||| |||||||||||||| ||||||  ||| |||||||| || |||||||||||||||||| ||  |||| |||||||||||||||||||    
T  29722055 acttggtatagttggatgcaagggaaaacaaaaggggagattggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgt 29722154  T
Q  210 tg 211  Q
    ||    
T  29722155 tg 29722156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 496 - 562
Target Start/End: Original strand, 33831560 - 33831626
Alignment:
Q  496 gaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||||||||||||||||||  ||| |||| |||| |||||||||||||||||||||||||||||    
T  33831560 gaaaacttgggaaatcaaaggagttaattttagggttaagggtctttgattagagttctcttgggtt 33831626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 334 - 454
Target Start/End: Original strand, 11181433 - 11181553
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattg 433  Q
    ||||| |||||||||||| |   || ||||||||| |||| ||||||||||||| |||| ||||| ||| | ||||| ||||||||||||||  |||| |    
T  11181433 caatcgtgacacgattttcgatttgtttggcacgtatacaagataaggttggtcataccgtgggttgtacgtatcaaccgtgtcacaatttggtcaatcg 11181532  T
Q  434 tgacacatttttgacaactga 454  Q
    |||||||||||| ||| ||||    
T  11181533 tgacacattttttacagctga 11181553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 13342943 - 13343007
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| | ||||||| |||| ||||||| |||||||||||||||||||||    
T  13342943 aaacttgggaaatcaaaggaagcaactttagggtttagggtctctgattagagttctcttgggtt 13343007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 365 - 425
Target Start/End: Complemental strand, 14520692 - 14520632
Alignment:
Q  365 acgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||||| ||||||||||||||||||||||||||||||| |||| ||||||||||| |||||    
T  14520692 acgttttcaggataaggttggtcgtaccttgggtcgtacgcattaatcgtgtcacgatttg 14520632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 25412644 - 25412708
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| | ||| ||| |||| |||||||||||||||||||||||||||||    
T  25412644 aaacttgggaaatcaaaggaggcaacattagggtttagggtctttgattagagttctcttgggtt 25412708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 30182471 - 30182535
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| | ||||||| || | |||||||||||||||||||||||||||||    
T  30182471 aaacttgggaaatcaaaggaagcaactttagggattagggtctttgattagagttctcttgggtt 30182535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 40146712 - 40146824
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgt 389  Q
    |||| |||| |||||||||| ||||||||||||||||||||||| ||   |||| |||||||  || || | | ||||||| ||||| || |||||||||    
T  40146712 gtgaacatggttttcagggtgtccaatcgtgacacgattttgggaaaatgtgactcgattttcagcttgttggtcacgttttcaggaaaaagttggtcgt 40146811  T
Q  390 accttgggtcgta 402  Q
    |||||||||||||    
T  40146812 accttgggtcgta 40146824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 42426921 - 42426825
Alignment:
Q  111 ctacttggtgtagttagatgcaagggaaaagaaaaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaaat 207  Q
    ||||||||||||| | ||||||||||||||||||| |  | |||||||| ||  |||||||||||||||||||| |||  | |||||||||||||||    
T  42426921 ctacttggtgtagatggatgcaagggaaaagaaaaaggaattggtggttgatacttaaagtggcatcatcatcaatttgaattcaaggtggagaaat 42426825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 334 - 425
Target Start/End: Original strand, 27015021 - 27015112
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    ||||| ||||||||||||  || || | |||| |||| ||||||||||||||||||||||||||||||| ||| ||| |||||||| |||||    
T  27015021 caatcgtgacacgattttcagcttgttgggcatgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttg 27015112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 300 - 391
Target Start/End: Complemental strand, 30683403 - 30683312
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtac 391  Q
    ||||||| || |||||||||||||| |||||||| || | |||||||||||| | | |||| |||| |||| ||||||||||||||||||||    
T  30683403 ttttcagagtgtccaatcgtgacacaattttgggaaaacgtgacacgattttcgacttgctaggcaagttttcaggataaggttggtcgtac 30683312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 367 - 426
Target Start/End: Original strand, 36931986 - 36932045
Alignment:
Q  367 gtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttga 426  Q
    |||| ||||||||||||||||||||||||||||||| | |||||||||| ||||||||||    
T  36931986 gttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtgacacaatttga 36932045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 334 - 415
Target Start/End: Original strand, 13342767 - 13342849
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtg 415  Q
    ||||| |||||||||||||||| |||| |||| | ||| ||||||||||||||||||||||| | ||||| ||||||||||||    
T  13342767 caatcgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttagatcgtacgcatcaatcgtg 13342849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 415
Target Start/End: Original strand, 30182302 - 30182376
Alignment:
Q  342 acacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtg 415  Q
    |||||||||||||| |||| |||| | ||| ||||||||||||||||||||||||| ||||| ||||||||||||    
T  30182302 acacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtg 30182376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 497 - 559
Target Start/End: Original strand, 42926774 - 42926836
Alignment:
Q  497 aaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgg 559  Q
    |||||||||||||||||| || ||||||||| | |||| ||||||||||||||||||||||||    
T  42926774 aaaacttgggaaatcaaatgaggtaactttaggattgatggtctttgattagagttctcttgg 42926836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 42310221 - 42310157
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| ||||||||| |||| | ||||||||||||| |||||||| ||||    
T  42310221 aaacttgggaaatcaaaggaggtaactttagggtttatggtctttgattagggttctctttggtt 42310157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 375 - 425
Target Start/End: Original strand, 38746535 - 38746585
Alignment:
Q  375 gataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||||||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  38746535 gataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacaatttg 38746585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 16408981 - 16409081
Alignment:
Q  113 acttggtgtagttagatgcaagggaaaagaaaa-ggagaatggtggttcattgttaaagtggcatcatcatcattttag-agtcaaggtggagaaatgtt 210  Q
    ||||||| |||||  |||||||||||||||||| || || |||||||| || ||||||||| ||||| || ||  |||| ||||||||||||||||||||    
T  16408981 acttggtatagttgaatgcaagggaaaagaaaagggggattggtggttgatggttaaagtgacatcaccaccaaattagaagtcaaggtggagaaatgtt 16409080  T
Q  211 g 211  Q
    |    
T  16409081 g 16409081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 367 - 426
Target Start/End: Original strand, 11916608 - 11916667
Alignment:
Q  367 gtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttga 426  Q
    |||| |||||| |||||||||||||||||||||||| ||| ||||||| |||| ||||||    
T  11916608 gttttcaggatcaggttggtcgtaccttgggtcgtacgcaccaatcgtatcacgatttga 11916667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 535459 - 535513
Alignment:
Q  164 gttaaagtggcatcatcatcattttagagtcaaggtggagaaatgttgcaaagtg 218  Q
    ||||||||||||||||||||| |||  || |||||||||||||||||| ||||||    
T  535459 gttaaagtggcatcatcatcaatttgaaggcaaggtggagaaatgttgtaaagtg 535513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 425
Target Start/End: Original strand, 9352971 - 9353029
Alignment:
Q  367 gtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||| |||||||||||||||||||||||||||||||   |||||||||| ||| |||||    
T  9352971 gttttcaggataaggttggtcgtaccttgggtcgtacatatcaatcgtggcacgatttg 9353029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 290 - 351
Target Start/End: Original strand, 213007 - 213068
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttt 351  Q
    ||||||||| ||| |||||  ||||||||||||||||||||||| || | ||||||||||||    
T  213007 gtgagcatggtttgcagggcgtccaatcgtgacacgattttgggaaaacgtgacacgatttt 213068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 9789503 - 9789438
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagag-ttctcttgggtt 562  Q
    |||||||||||||||||||  |||||| || |||| || |||||||||||||| ||||||||||||    
T  9789503 aaacttgggaaatcaaagggagtaactctagggtttagagtctttgattagagcttctcttgggtt 9789438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 16409364 - 16409429
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagag-ttctcttgggtt 562  Q
    |||||||||||||||||||  |||||| || |||| || |||||||||||||| ||||||||||||    
T  16409364 aaacttgggaaatcaaagggagtaactctagggtttagagtctttgattagagcttctcttgggtt 16409429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 18441927 - 18441862
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagag-ttctcttgggtt 562  Q
    |||||||||||||||||||  |||||| || |||| || |||||||||||||| ||||||||||||    
T  18441927 aaacttgggaaatcaaagggagtaactctagggtttagagtctttgattagagcttctcttgggtt 18441862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 521 - 562
Target Start/End: Original strand, 19806289 - 19806330
Alignment:
Q  521 aactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||| | ||||||||||||||||||||||||||||||||||    
T  19806289 aacttgagggttgagggtctttgattagagttctcttgggtt 19806330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 26177772 - 26177837
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagag-ttctcttgggtt 562  Q
    |||||||||||||||||||  |||||| || |||| || |||||||||||||| ||||||||||||    
T  26177772 aaacttgggaaatcaaagggagtaactctagggtttagagtctttgattagagcttctcttgggtt 26177837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 425
Target Start/End: Original strand, 31004796 - 31004848
Alignment:
Q  373 aggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||||||||||||| |||| |||||||||| ||| |||||||||||| |||||    
T  31004796 aggataaggttggttgtactttgggtcgtacgcaccaatcgtgtcacgatttg 31004848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 412
Target Start/End: Complemental strand, 36074467 - 36074427
Alignment:
Q  372 caggataaggttggtcgtaccttgggtcgtatgcatcaatc 412  Q
    ||||||||||||||||||||||||| ||||| |||||||||    
T  36074467 caggataaggttggtcgtaccttggatcgtacgcatcaatc 36074427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 16546161 - 16546220
Alignment:
Q  153 ggtggttcattgttaaagtggcatcatcatcattttag-agtcaaggtggagaaatgttg 211  Q
    ||||||| || |||||||||||||||||| ||  |||| |||||||||||||||||||||    
T  16546161 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg 16546220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 40381834 - 40381893
Alignment:
Q  153 ggtggttcattgttaaagtggcatcatcatcattttag-agtcaaggtggagaaatgttg 211  Q
    ||||||| || |||||||||||||||||| ||  |||| |||||||||||||||||||||    
T  40381834 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg 40381893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 292 - 330
Target Start/End: Original strand, 11181412 - 11181450
Alignment:
Q  292 gagcatgtttttcagggtttccaatcgtgacacgatttt 330  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  11181412 gagcatgttttgcagggtgtccaatcgtgacacgatttt 11181450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 391
Target Start/End: Original strand, 38746456 - 38746534
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtac 391  Q
    ||||||||||||  ||||||  || | |||||||||||| ||| |||| | || |||| ||||||||||||||||||||    
T  38746456 caatcgtgacacatttttggaaaaacgtgacacgattttcggcttgctggacaagttttcaggataaggttggtcgtac 38746534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 391
Target Start/End: Original strand, 533488 - 533545
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtac 391  Q
    ||||| ||||||| |||| ||| |||| |||| |||| ||||||||||||||||||||    
T  533488 caatcgtgacacggttttcggcttgctgggcaagttttcaggataaggttggtcgtac 533545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 26170663 - 26170728
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagag-ttctcttgggtt 562  Q
    |||||||||||||||||||  |||||| || |||| || ||||||||||| || ||||||||||||    
T  26170663 aaacttgggaaatcaaagggagtaactctagggtttagagtctttgattacagcttctcttgggtt 26170728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 5e-45; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 246 - 562
Target Start/End: Complemental strand, 36318559 - 36318231
Alignment:
Q  246 aatcatgacacgatttgtggaccatgacacaattttcctatgtcgtgagcatgtttttcagggtttccaatcgtgacacgatttt-gggcaatcatgaca 344  Q
    |||| |||||||||||||| | | || ||| ||||  | |||||| ||||||||||| |||||| |||||||||||||||||||| ||| || | |||||    
T  36318559 aatcgtgacacgatttgtgaaacgtgtcacgatttcgcaatgtcgagagcatgttttgcagggtgtccaatcgtgacacgatttttggggaaacgtgaca 36318460  T
Q  345 cgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttt 444  Q
    ||||||| ||| |||| | ||||||| ||||||||||||||||||||||||  ||||| ||| ||| |||||||||||||||| ||  |||||||  |||    
T  36318459 cgattttcggcttgctggccacgttttcaggataaggttggtcgtaccttgaatcgtacgcaccaaccgtgtcacaatttgacaaaacgtgacacgattt 36318360  T
Q  445 tgacaactgaagtctttaatgtaaatgtttctttgcagattttg------------aagagatgaaaacttgggaaatcaaaggacgtaactttatggtt 532  Q
    ||||| |||||| ||   || ||| || ||||||||||||||||            ||||||   |||||||||||||||||||| ||||||||| ||||    
T  36318359 tgacagctgaagactgctatataagtg-ttctttgcagattttgaaggagaggtaaaagagagagaaacttgggaaatcaaaggaggtaactttagggtt 36318261  T
Q  533 gagggtctttgattagagttctcttgggtt 562  Q
    ||  |||||||||||||||| |||||||||    
T  36318260 gaatgtctttgattagagttatcttgggtt 36318231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 298 - 425
Target Start/End: Complemental strand, 20522752 - 20522625
Alignment:
Q  298 gtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttggg 397  Q
    ||||||||||||   |||||||| |||||||||| | || | ||||||||||||   | |||| ||||||||| ||||||||||||||||||||||||||    
T  20522752 gtttttcagggtgctcaatcgtgtcacgattttgagaaaacgtgacacgattttcaacttgctgggcacgttttcaggataaggttggtcgtaccttggg 20522653  T
Q  398 tcgtatgcatcaatcgtgtcacaatttg 425  Q
    ||||| ||| ||||||||||||||||||    
T  20522652 tcgtacgcaccaatcgtgtcacaatttg 20522625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 300 - 562
Target Start/End: Complemental strand, 36988571 - 36988297
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgttta-caggataaggttggtcgtaccttgggt 398  Q
    |||||||||| ||||||||||||| ||||||||| || | |||||||||||| | | |||| |||| ||||  |||||||||||||||||||||||||||    
T  36988571 ttttcagggtgtccaatcgtgacatgattttgggaaaacgtgacacgattttcgacttgctgggcaagtttttcaggataaggttggtcgtaccttgggt 36988472  T
Q  399 cgtatgcatcaatcgtgtcacaatttgacc--aattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttgaag-aga- 494  Q
    |||| |||||||| ||| ||| ||| ||    || ||||||||  |||||||  |||||| ||   || ||| |||| ||||||| ||||||||| |||     
T  36988471 cgtacgcatcaattgtgacacgatt-gatggaaaatgtgacacgattttgacg-ctgaagactgctatataagtgtt-ctttgcatattttgaaggagag 36988375  T
Q  495 --tgaa--------aacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
      ||||        ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  36988374 cttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggtt 36988297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 300 - 425
Target Start/End: Complemental strand, 34389379 - 34389253
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttgg-catgcttggcacgtttacaggataaggttggtcgtaccttgggt 398  Q
    |||||||||| ||||||||||||||||||||||| || | ||||||||||||    | |||| || |||||| |||||||||||||||||||||||||||    
T  34389379 ttttcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggt 34389280  T
Q  399 cgtatgcatcaatcgtgtcacaatttg 425  Q
    |||| ||| |||||||||||| |||||    
T  34389279 cgtacgcaccaatcgtgtcacgatttg 34389253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 489 - 562
Target Start/End: Complemental strand, 11151886 - 11151813
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  11151886 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggtt 11151813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 489 - 562
Target Start/End: Complemental strand, 14202702 - 14202629
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  14202702 aagagaggaaaacttgggaaatcaaatgaggtaactttatggttgagggtctttgattagagttctcttgggtt 14202629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 489 - 562
Target Start/End: Original strand, 42362225 - 42362298
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  42362225 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggtt 42362298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 314 - 420
Target Start/End: Complemental strand, 40015420 - 40015314
Alignment:
Q  314 aatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcg 413  Q
    ||||||||||  |||||| |||||| ||||||||||||||||||| ||| ||||||| || ||||| |||||||||||||||| ||||| ||||||||||    
T  40015420 aatcgtgacataattttgagcaatcgtgacacgatttttggcatgattgacacgttttcatgataatgttggtcgtaccttggatcgtaagcatcaatcg 40015321  T
Q  414 tgtcaca 420  Q
    || ||||    
T  40015320 tgacaca 40015314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 489 - 562
Target Start/End: Original strand, 11690374 - 11690447
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  11690374 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattatagttctcttgggtt 11690447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 298 - 418
Target Start/End: Complemental strand, 2837341 - 2837221
Alignment:
Q  298 gtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttggg 397  Q
    ||||| |||||| ||||||||||||||||||||||| || | ||||||||||||   | |||| || | |||| ||||||||||||||||||||||||||    
T  2837341 gttttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcaccttgctgggtaagttttcaggataaggttggtcgtaccttggg 2837242  T
Q  398 tcgtatgcatcaatcgtgtca 418  Q
    ||||| ||| ||| |||||||    
T  2837241 tcgtacgcaccaaacgtgtca 2837221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 39284767 - 39284831
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  39284767 aaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggtt 39284831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 300 - 415
Target Start/End: Original strand, 45099427 - 45099543
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggt 398  Q
    |||| ||||| |||||||||||||| |||||||| |||  |||||||||||||||| |||| |||| | ||| ||||||||||||||||||||||||  |    
T  45099427 tttttagggtgtccaatcgtgacacaattttgggaaattgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgaat 45099526  T
Q  399 cgtatgcatcaatcgtg 415  Q
    |||| ||||||||||||    
T  45099527 cgtacgcatcaatcgtg 45099543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 496 - 562
Target Start/End: Complemental strand, 724032 - 723966
Alignment:
Q  496 gaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||    
T  724032 gaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttcttttgggtt 723966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 2334703 - 2334639
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  2334703 aaacttgggaaatcaaaggaggtaactttagggttgagggtatttgattagagttctcttgggtt 2334639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 313 - 425
Target Start/End: Complemental strand, 21630460 - 21630348
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatc 412  Q
    |||||||| ||| |||||||| || ||||||||||||||   | |||| ||||||||| |||||||||||||||||||| ||||||||||  || |||||    
T  21630460 caatcgtgtcacaattttgggaaaacatgacacgattttcaacttgctgggcacgttttcaggataaggttggtcgtactttgggtcgtacacaccaatc 21630361  T
Q  413 gtgtcacaatttg 425  Q
    ||||||| |||||    
T  21630360 gtgtcacgatttg 21630348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 489 - 562
Target Start/End: Complemental strand, 14634121 - 14634048
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| |||||||||||||||||||||| |||||||||  ||||||||| ||||||||||||||| |||||||    
T  14634121 aagagaagaaaacttgggaaatcaaaggaggtaactttagagttgagggtttttgattagagttcttttgggtt 14634048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 489 - 562
Target Start/End: Complemental strand, 34140066 - 34139993
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| |||||||||| ||||||||||| ||||||||| ||||||  ||||||||||||||||||||||||||    
T  34140066 aagagaggaaaacttggaaaatcaaaggaggtaactttagggttgaaagtctttgattagagttctcttgggtt 34139993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 334 - 425
Target Start/End: Complemental strand, 2334879 - 2334787
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    ||||| |||||||||||||||| |||| |||| | ||| |||||||||||||||||||||||||||||||  ||||||||||| ||| |||||    
T  2334879 caatcgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtacacatcaatcgtgacacgatttg 2334787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 36205949 - 36205885
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| | ||||||| |||| |||||||||||||||||||||||||||||    
T  36205949 aaacttgggaaatcaaaggaagcaactttagggtttagggtctttgattagagttctcttgggtt 36205885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 502 - 562
Target Start/End: Original strand, 38312126 - 38312186
Alignment:
Q  502 ttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||    
T  38312126 ttgggaaatcaaaggaggtaactttagggttgaggttctttgattagagttctcttgggtt 38312186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 45099637 - 45099701
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| | ||||||| |||| |||||||||||||||||||||||||||||    
T  45099637 aaacttgggaaatcaaaggaagcaactttagggtttagggtctttgattagagttctcttgggtt 45099701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 290 - 456
Target Start/End: Original strand, 33528182 - 33528349
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttgg-catgcttggcacgtttacaggataaggttggtcg 388  Q
    ||||||||| ||| ||||||   |||||||| |||||||||||| || | ||||||||||||    | |||| || |||||| ||| ||||||||| |||    
T  33528182 gtgagcatggtttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgctgggtacgttttcagaataaggttgatcg 33528281  T
Q  389 taccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaag 456  Q
    |||||||||||||| ||| |||||||||||| |||||  |||  |||||||  |||| ||||||||||    
T  33528282 taccttgggtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttaacaactgaag 33528349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 298 - 456
Target Start/End: Complemental strand, 39483407 - 39483248
Alignment:
Q  298 gtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttgg-catgcttggcacgtttacaggataaggttggtcgtaccttgg 396  Q
    ||||||||||||   |||||||| |||||||||||| || | ||||||||||||    | || | || |||||| |||||||||||||||||||||||||    
T  39483407 gtttttcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgg 39483308  T
Q  397 gtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaag 456  Q
    ||| || ||| |||||||||||| |||||  |||  ||| |||| |||||||| ||||||    
T  39483307 gtcttacgcaccaatcgtgtcacgatttggacaaacgtggcacaattttgacagctgaag 39483248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 334 - 415
Target Start/End: Complemental strand, 5723716 - 5723634
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtg 415  Q
    ||||| |||||||||||||||| |||| | || | ||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  5723716 caatcgtgacacgatttttggcttgctggacaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtg 5723634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 498 - 560
Target Start/End: Complemental strand, 6595292 - 6595230
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttggg 560  Q
    |||||| |||||||||| || ||||||||| ||||||||||||||||||||||||||||||||    
T  6595292 aaacttaggaaatcaaatgaggtaactttagggttgagggtctttgattagagttctcttggg 6595230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 4503418 - 4503354
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| | ||||||| |||| ||| |||||||||||||||||||||||||    
T  4503418 aaacttgggaaatcaaaggaagcaactttagggtttaggttctttgattagagttctcttgggtt 4503354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 5723540 - 5723476
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| | ||||||| ||||  ||||||||||||||||||||||||||||    
T  5723540 aaacttgggaaatcaaaggaggcaactttagggtttggggtctttgattagagttctcttgggtt 5723476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 558
Target Start/End: Complemental strand, 33162736 - 33162676
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttg 558  Q
    |||||||||||||||||||| |||| |||| |||||||||||||||||||| |||||||||    
T  33162736 aaacttgggaaatcaaaggaggtaattttagggttgagggtctttgattagggttctcttg 33162676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 558
Target Start/End: Original strand, 36773431 - 36773491
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttg 558  Q
    ||||| |||||||||||||| ||||||||| |||||||||||||||||||| |||||||||    
T  36773431 aaactagggaaatcaaaggaggtaactttagggttgagggtctttgattagggttctcttg 36773491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 334 - 411
Target Start/End: Complemental strand, 4503594 - 4503516
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggtcgtatgcatcaat 411  Q
    ||||| |||||||||||||||| |||| |||| | ||| ||||||||||||||||||||||||| ||||| ||||||||    
T  4503594 caatcgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaat 4503516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 425
Target Start/End: Original strand, 28258814 - 28258872
Alignment:
Q  367 gtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  28258814 gttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgatttg 28258872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 456
Target Start/End: Complemental strand, 33118665 - 33118507
Alignment:
Q  298 gtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttggg 397  Q
    ||||||||||||   |||||||| |||| |||| || || | |||||| |||||   | |||| ||||| ||| || ||||||||||| |||||||||||    
T  33118665 gtttttcagggtgctcaatcgtgtcacgtttttaggaaaacgtgacacaattttcaacttgctgggcacattttcaagataaggttggccgtaccttggg 33118566  T
Q  398 tcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaag 456  Q
    ||||| ||| |||||||||||| |||||  |||   ||||||  |||||||||||||||    
T  33118565 tcgtacgcaccaatcgtgtcacgatttggacaaacatgacacgattttgacaactgaag 33118507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 505 - 562
Target Start/End: Complemental strand, 17057648 - 17057591
Alignment:
Q  505 ggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||||| ||| ||||||||| |||||| |||||||||||||||||||||||||||    
T  17057648 ggaaatcaacggaggtaactttagggttgaaggtctttgattagagttctcttgggtt 17057591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 505 - 562
Target Start/End: Complemental strand, 17085631 - 17085574
Alignment:
Q  505 ggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||||| ||| ||||||||| |||||| |||||||||||||||||||||||||||    
T  17085631 ggaaatcaacggaggtaactttagggttgaaggtctttgattagagttctcttgggtt 17085574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 300 - 391
Target Start/End: Complemental strand, 6595490 - 6595398
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggc-acgtttacaggataaggttggtcgtac 391  Q
    |||||||||| |||||||||||||| |||||||| || | |||||||||||||||| |||| ||| |  ||| |||||||||||| |||||||    
T  6595490 ttttcagggtgtccaatcgtgacacaattttgggaaaacgtgacacgatttttggcttgctgggctagattttcaggataaggttagtcgtac 6595398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 17865640 - 17865589
Alignment:
Q  365 acgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgt 416  Q
    |||||| ||||||||||||||||||||||||||||||| ||| |||||||||    
T  17865640 acgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgt 17865589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 34907635 - 34907585
Alignment:
Q  28 tcggtgtaacatcatcaagtgacaaaataaattatcccaacattttttaaca 79  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  34907635 tcggtgtaacatcatcaagtgactaa-taaattatcccaacattttttaaca 34907585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 391
Target Start/End: Original strand, 39284574 - 39284661
Alignment:
Q  304 cagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtac 391  Q
    |||||| ||| ||||||||||||||||||| || | |||||| ||||| ||| |||| || | |||| ||||||||||||||||||||    
T  39284574 cagggtgtcctatcgtgacacgattttgggaaaacgtgacacaattttcggcttgctgggaaagttttcaggataaggttggtcgtac 39284661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 4484617 - 4484552
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagag-ttctcttgggtt 562  Q
    |||||||||||||||||||  |||||| || |||| ||||||||||||||||| ||||||||||||    
T  4484617 aaacttgggaaatcaaagggagtaactctagggtttagggtctttgattagagcttctcttgggtt 4484552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 290 - 351
Target Start/End: Original strand, 45726469 - 45726530
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttt 351  Q
    ||||||||| |||||||||| |||||| |||||||||||||||||||   ||||||||||||    
T  45726469 gtgagcatgattttcagggtgtccaattgtgacacgattttgggcaaatgtgacacgatttt 45726530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 498 - 558
Target Start/End: Original strand, 11067174 - 11067234
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttg 558  Q
    ||||| |||||||||||||| ||||||||||||||||  |||||||||||  |||||||||    
T  11067174 aaactagggaaatcaaaggaggtaactttatggttgattgtctttgattaaggttctcttg 11067234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 402
Target Start/End: Original strand, 14698600 - 14698680
Alignment:
Q  322 cacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgta 402  Q
    |||||||||||| || | ||||||||||||   | || | ||||| ||| |||||||||||||||||||||||||||||||    
T  14698600 cacgattttgggaaaacgtgacacgattttcaacttgttgggcacattttcaggataaggttggtcgtaccttgggtcgta 14698680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 17863855 - 17863955
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcg 388  Q
    ||||||||| |||||||||| |||||||||||||  |||||||| || | |||||||||||||  | |||| |||| | |||  ||||||||||||||||    
T  17863855 gtgagcatggttttcagggtgtccaatcgtgacataattttgggaaaacgtgacacgattttttacttgctgggcaagtttttgaggataaggttggtcg 17863954  T
Q  389 t 389  Q
    |    
T  17863955 t 17863955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 425
Target Start/End: Original strand, 23078106 - 23078166
Alignment:
Q  365 acgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||||| ||||||||||||||||||| ||||||||||| ||| |||||||| ||| |||||    
T  23078106 acgttttcaggataaggttggtcgtatcttgggtcgtacgcaccaatcgtgccacgatttg 23078166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 391
Target Start/End: Original strand, 29867552 - 29867644
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtac 391  Q
    |||||||||| ||||||||||||||||||||||| || | |||||||||||| | | |||| |||| | ||| || |||||||||||| ||||    
T  29867552 ttttcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgctgggcaagtttttcaagataaggttggttgtac 29867644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 29867751 - 29867815
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| || |||||||| | |||||| |  ||||||||||||||||||||||||||||||||||    
T  29867751 aaactttgggaatcaaagaaggtaactattgggttgagggtctttgattagagttctcttgggtt 29867815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 32289454 - 32289519
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagag-ttctcttgggtt 562  Q
    |||||||||||||||||||  |||||| || |||| || |||||||||||||| ||||||||||||    
T  32289454 aaacttgggaaatcaaagggagtaactctagggtttagagtctttgattagagcttctcttgggtt 32289519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 290 - 419
Target Start/End: Complemental strand, 35447606 - 35447477
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgt 389  Q
    ||||||||  |||||||||| | |||| || ||||||||||||| ||   |||||||||| | ||  ||   |||| |||| || |||||||||| ||||    
T  35447606 gtgagcattgttttcagggtgttcaattgtaacacgattttgggaaaatgtgacacgattatcggtttgtcgggcaagttttcaagataaggttgctcgt 35447507  T
Q  390 accttgggtcgtatgcatcaatcgtgtcac 419  Q
    ||||||||||||| ||| ||| ||||||||    
T  35447506 accttgggtcgtacgcaccaaacgtgtcac 35447477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 335 - 411
Target Start/End: Complemental strand, 36206126 - 36206049
Alignment:
Q  335 aatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggtcgtatgcatcaat 411  Q
    |||| |||||||||||||||| |||| || | | ||| ||||||||||||||||||||||||| | ||| ||||||||    
T  36206126 aatcgtgacacgatttttggcttgctgggaaagattttcaggataaggttggtcgtaccttggattgtacgcatcaat 36206049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 496 - 548
Target Start/End: Complemental strand, 7815574 - 7815523
Alignment:
Q  496 gaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattag 548  Q
    ||||||||| |||||||| ||| ||||||||| ||||||||||||||||||||    
T  7815574 gaaaacttgagaaatcaa-ggaggtaactttagggttgagggtctttgattag 7815523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 498 - 554
Target Start/End: Original strand, 11049419 - 11049474
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttct 554  Q
    |||||||||||||||||||| |||| |||| |||||| ||||||||||||| |||||    
T  11049419 aaacttgggaaatcaaaggaggtaa-tttagggttgatggtctttgattagggttct 11049474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 12123871 - 12123807
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||  ||||||||| | ||||||||| |||||| |||||||| ||||||||||||| ||||    
T  12123871 aaacttgaaaaatcaaagtaggtaactttaaggttgatggtctttggttagagttctcttaggtt 12123807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 31056751 - 31056675
Alignment:
Q  148 agaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaaatgttgcaaagtgactcaa 224  Q
    |||| ||||||| ||  ||||| || ||||| || || |||||||||||||||||||||||||| ||| ||||||||    
T  31056751 agaaaggtggttgatgattaaattgacatcaccaccaatttagagtcaaggtggagaaatgttgaaaattgactcaa 31056675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 372 - 418
Target Start/End: Original strand, 8389790 - 8389836
Alignment:
Q  372 caggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtca 418  Q
    |||||||||||||| |||||||||||||||| ||| ||||| |||||    
T  8389790 caggataaggttggacgtaccttgggtcgtacgcaccaatcatgtca 8389836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 373 - 415
Target Start/End: Original strand, 10706895 - 10706937
Alignment:
Q  373 aggataaggttggtcgtaccttgggtcgtatgcatcaatcgtg 415  Q
    ||||||||||||||||||||||||||||||  || ||||||||    
T  10706895 aggataaggttggtcgtaccttgggtcgtacacaccaatcgtg 10706937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 425
Target Start/End: Complemental strand, 13569785 - 13569733
Alignment:
Q  372 caggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    ||||||||||||| ||||||||||| ||||| ||| |||||||||||| |||||    
T  13569785 caggataaggttg-tcgtaccttggatcgtaagcaccaatcgtgtcacgatttg 13569733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 30833227 - 30833292
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagag-ttctcttgggtt 562  Q
    |||||||||||||||||||  |||||| || |||| ||||| ||||||||||| || |||||||||    
T  30833227 aaacttgggaaatcaaagggagtaactctagggtttagggtttttgattagagcttatcttgggtt 30833292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 8e-44; HSPs: 58)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 305 - 491
Target Start/End: Original strand, 21272563 - 21272749
Alignment:
Q  305 agggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatg 404  Q
    ||||| ||||||||||||||||||||||| |||| || ||||||||||| |||| ||||||||||| |||||||||||||||| |||||||| ||||| |    
T  21272563 agggtgtccaatcgtgacacgattttgggtaatcgtgtcacgatttttgacatgtttggcacgttttcaggataaggttggtcataccttggatcgtacg 21272662  T
Q  405 catcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttgaag 491  Q
    || ||| |||||||  ||||| ||||| |||||||| ||||||||||||||| ||   || ||| ||||||||||||| ||||||||    
T  21272663 caccaaccgtgtcaagatttggccaatcgtgacacaattttgacaactgaagactgctatataagtgtttctttgcagtttttgaag 21272749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 300 - 424
Target Start/End: Complemental strand, 9183505 - 9183381
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtc 399  Q
    |||| ||||| ||||||||||||||||||||||| || | |||||||||||||| | |||| |||| |||| ||||||||||||||||||||||||||||    
T  9183505 tttttagggtgtccaatcgtgacacgattttgggaaaacgtgacacgatttttgacttgctgggcaagttttcaggataaggttggtcgtaccttgggtc 9183406  T
Q  400 gtatgcatcaatcgtgtcacaattt 424  Q
    ||| |||||||||||| ||| ||||    
T  9183405 gtacgcatcaatcgtgacacgattt 9183381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 290 - 401
Target Start/End: Original strand, 21593111 - 21593222
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgt 389  Q
    ||||||||| |||||||||| |||||||||||||| |||||||| || | |||||||||||| ||| |||| |||| ||||  |||||||||||||||||    
T  21593111 gtgagcatggttttcagggtgtccaatcgtgacacaattttgggaaaacgtgacacgattttcggcttgctgggcatgtttttaggataaggttggtcgt 21593210  T
Q  390 accttgggtcgt 401  Q
    ||||||||||||    
T  21593211 accttgggtcgt 21593222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 343 - 424
Target Start/End: Complemental strand, 26954755 - 26954674
Alignment:
Q  343 cacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaattt 424  Q
    |||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  26954755 cacgatttttggcatgcttgacacattttcaggataaggttggtcgtaccttgggtcgtacgcatcaaccgtgtcacgattt 26954674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 300 - 415
Target Start/End: Complemental strand, 5407404 - 5407288
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggt 398  Q
    ||||||| || ||||||||||||||||||||||  |||| ||||||  |||||||| |||| |||| | ||| || ||||||||||||||||||||||||    
T  5407404 ttttcagagtgtccaatcgtgacacgattttggaaaatcgtgacacattttttggcttgctgggcaagattttcaagataaggttggtcgtaccttgggt 5407305  T
Q  399 cgtatgcatcaatcgtg 415  Q
    |||| ||||||||||||    
T  5407304 cgtacgcatcaatcgtg 5407288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 300 - 415
Target Start/End: Complemental strand, 5411729 - 5411613
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggt 398  Q
    ||||||| || ||||||||||||||||||||||  |||| ||||||  |||||||| |||| |||| | ||| || ||||||||||||||||||||||||    
T  5411729 ttttcagagtgtccaatcgtgacacgattttggaaaatcgtgacacattttttggcttgctgggcaagattttcaagataaggttggtcgtaccttgggt 5411630  T
Q  399 cgtatgcatcaatcgtg 415  Q
    |||| ||||||||||||    
T  5411629 cgtacgcatcaatcgtg 5411613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 297 - 425
Target Start/End: Complemental strand, 22964229 - 22964101
Alignment:
Q  297 tgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgg 396  Q
    |||||| |||||| | ||||||||| ||||||||||| || | |||||||||||||||| |||| | || |||| ||||||||||||||||||||||||     
T  22964229 tgttttgcagggtgttcaatcgtgatacgattttgggaaaacgtgacacgatttttggcttgctggacaagttttcaggataaggttggtcgtaccttgt 22964130  T
Q  397 gtcgtatgcatcaatcgtgtcacaatttg 425  Q
     ||||| ||  ||| ||||||||||||||    
T  22964129 atcgtacgcgccaaacgtgtcacaatttg 22964101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 297 - 425
Target Start/End: Original strand, 23824164 - 23824292
Alignment:
Q  297 tgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgg 396  Q
    |||||| |||||| | ||||||||| ||||||||||| || | |||||||||||||||| |||| | || |||| ||||||||||||||||||||||||     
T  23824164 tgttttgcagggtgttcaatcgtgatacgattttgggaaaacgtgacacgatttttggcttgctggacaagttttcaggataaggttggtcgtaccttgt 23824263  T
Q  397 gtcgtatgcatcaatcgtgtcacaatttg 425  Q
     ||||| ||  ||| ||||||||||||||    
T  23824264 atcgtacgcgccaaacgtgtcacaatttg 23824292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 3050927 - 3050865
Alignment:
Q  14 tgaatatcttccgctcggtgtaacatcatcaagtgacaaaataaattatcccaacatttttta 76  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3050927 tgaatatctcccgctcggtgtaacatcatcaagtgactaaataaattatcccaacatttttta 3050865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 314 - 492
Target Start/End: Original strand, 24435555 - 24435733
Alignment:
Q  314 aatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcg 413  Q
    ||||||| || ||||||||| || | ||||||||||||   | || ||||||||||| ||||||||||||||||||||||||||| ||| ||| ||| ||    
T  24435555 aatcgtgtcatgattttgggaaaacgtgacacgattttcaacttgtttggcacgttttcaggataaggttggtcgtaccttgggttgtacgcaccaaccg 24435654  T
Q  414 tgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttgaaga 492  Q
    |||||| ||||| ||||| |||||||   |||||||  ||||| ||   || ||| ||||| |||||| ||||||||||    
T  24435655 tgtcacgatttggccaatcgtgacacgaatttgacagttgaagactgctatataagtgtttgtttgcaaattttgaaga 24435733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 113 - 205
Target Start/End: Complemental strand, 5406843 - 5406750
Alignment:
Q  113 acttggtgtagttagatgcaagggaaaagaaaagg-agaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaa 205  Q
    ||||||||||||| |||||||| |||||||||||| ||| |||||||| || ||||||||||||||||||||| |||  |||||||||||||||    
T  5406843 acttggtgtagttggatgcaagcgaaaagaaaagggagattggtggttgatggttaaagtggcatcatcatcaatttcaagtcaaggtggagaa 5406750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 113 - 205
Target Start/End: Complemental strand, 5411168 - 5411075
Alignment:
Q  113 acttggtgtagttagatgcaagggaaaagaaaagg-agaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaa 205  Q
    ||||||||||||| |||||||| |||||||||||| ||| |||||||| || ||||||||||||||||||||| |||  |||||||||||||||    
T  5411168 acttggtgtagttggatgcaagcgaaaagaaaagggagattggtggttgatggttaaagtggcatcatcatcaatttcaagtcaaggtggagaa 5411075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 489 - 562
Target Start/End: Original strand, 16567079 - 16567152
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| ||||||||||||||||||||||  |||||||| |||| |||||||||||||||||||||||||||||    
T  16567079 aagagaggaaaacttgggaaatcaaaggagttaactttagggttaagggtctttgattagagttctcttgggtt 16567152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 489 - 562
Target Start/End: Complemental strand, 28137703 - 28137630
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| |||||||||| |||||||||||  |||||||| ||||||||||||||||||||||||||||||||||    
T  28137703 aagagaggaaaacttggaaaatcaaaggagttaactttagggttgagggtctttgattagagttctcttgggtt 28137630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 9183317 - 9183253
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||    
T  9183317 aaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcctgggtt 9183253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 33211471 - 33211407
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||    
T  33211471 aaacttgggaaatcaaaggaggtaactttacagttgagggtctttgattagagttctcttgggtt 33211407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 456
Target Start/End: Complemental strand, 31980056 - 31979889
Alignment:
Q  290 gtgagcatg-tttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcg 388  Q
    ||||||||| |||||||||||   |||||||| |||||||||||  || | |||||| |||||   | |||| ||||||||| |||||||||||||||||    
T  31980056 gtgagcatggtttttcagggtgatcaatcgtgtcacgattttggaaaaacgtgacacaattttcaacttgctgggcacgttttcaggataaggttggtcg 31979957  T
Q  389 taccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaag 456  Q
    ||| ||| |||||| ||| |||||||||||| |||||  |||  |||||||  ||||||||| |||||    
T  31979956 tactttgagtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttgacaattgaag 31979889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 334 - 415
Target Start/End: Complemental strand, 5413910 - 5413828
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtg 415  Q
    ||||| |||||||||||||||| |||| |||| | ||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  5413910 caatcgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtg 5413828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 496 - 562
Target Start/End: Complemental strand, 33160641 - 33160575
Alignment:
Q  496 gaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||||||| |||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||    
T  33160641 gaaaacttggggaatcaaaggaggtaactttagggttgagagtctttgattagagttctcttgggtt 33160575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 113 - 205
Target Start/End: Complemental strand, 5407611 - 5407518
Alignment:
Q  113 acttggtgtagttagatgcaagggaaaagaaaa-ggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaa 205  Q
    ||||||||||||| ||||||||||||||||||| ||| | |||||| | || ||||||||||||||||||||| |||  |||||||||||||||    
T  5407611 acttggtgtagttggatgcaagggaaaagaaaagggatattggtggatgatggttaaagtggcatcatcatcaatttgaagtcaaggtggagaa 5407518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 113 - 205
Target Start/End: Complemental strand, 5411936 - 5411843
Alignment:
Q  113 acttggtgtagttagatgcaagggaaaagaaaa-ggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaa 205  Q
    ||||||||||||| ||||||||||||||||||| ||| | |||||| | || ||||||||||||||||||||| |||  |||||||||||||||    
T  5411936 acttggtgtagttggatgcaagggaaaagaaaagggatattggtggatgatggttaaagtggcatcatcatcaatttgaagtcaaggtggagaa 5411843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 489 - 562
Target Start/End: Original strand, 16568916 - 16568989
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| ||||||||||||||||||||||  ||| |||| |||| |||||||||||||||||||||||||||||    
T  16568916 aagagaggaaaacttgggaaatcaaaggaattaaatttagggttaagggtctttgattagagttctcttgggtt 16568989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 489 - 562
Target Start/End: Complemental strand, 26954580 - 26954507
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| |||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||| |||| ||||    
T  26954580 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagagtctttgattagagttatcttaggtt 26954507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 372 - 456
Target Start/End: Original strand, 5017137 - 5017221
Alignment:
Q  372 caggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaag 456  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||  || ||||||||  |||||||| ||||||    
T  5017137 caggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttgaaaaaatgtgacacgattttgacagctgaag 5017221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 297 - 425
Target Start/End: Original strand, 10076757 - 10076885
Alignment:
Q  297 tgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgg 396  Q
    |||||| ||||||  |||||| ||| ||||||||||| || | ||| |||||||||  | ||||    |||||| |||||||||||||||||||||||||    
T  10076757 tgttttgcagggtgcccaatcatgatacgattttgggaaaacgtgatacgatttttaacttgctgattacgttttcaggataaggttggtcgtaccttgg 10076856  T
Q  397 gtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||||| ||| |||||||||||| |||||    
T  10076857 gtcgtacgcaccaatcgtgtcacgatttg 10076885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 365 - 456
Target Start/End: Complemental strand, 18234546 - 18234455
Alignment:
Q  365 acgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaag 456  Q
    |||||| ||||||||||||||||||||||||||||||| ||| |||||||||||| |||||  |||  |||||||  |||||||| ||||||    
T  18234546 acgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttgacagctgaag 18234455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 419
Target Start/End: Complemental strand, 603719 - 603613
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatc 412  Q
    ||||||||||||||||||||| || | ||||| |||||| ||| |||| |||| |||| ||||||||||||| ||||| ||||| ||||| ||| ||| |    
T  603719 caatcgtgacacgattttgggaaaacgtgacatgattttcggcttgctgggcaagttttcaggataaggttgatcgtatcttggatcgtacgcaccaaac 603620  T
Q  413 gtgtcac 419  Q
    |||||||    
T  603619 gtgtcac 603613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 334 - 415
Target Start/End: Complemental strand, 5406660 - 5406578
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtg 415  Q
    ||||| |||||||||||||||| |||| |||| | |||  |||||||||||||||||||||||||||||| ||||||||||||    
T  5406660 caatcgtgacacgatttttggcttgctgggcaagatttttaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtg 5406578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 334 - 415
Target Start/End: Complemental strand, 5410985 - 5410903
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtg 415  Q
    ||||| |||||||||||||||| |||| |||| | |||  |||||||||||||||||||||||||||||| ||||||||||||    
T  5410985 caatcgtgacacgatttttggcttgctgggcaagatttttaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtg 5410903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 334 - 415
Target Start/End: Complemental strand, 16452902 - 16452820
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtg 415  Q
    ||||| |||||||||||||||| |||| || | | ||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  16452902 caatcgtgacacgatttttggcttgctgggaaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtg 16452820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 334 - 415
Target Start/End: Complemental strand, 30834999 - 30834917
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtg 415  Q
    ||||| |||||||||||||||| |||| |||| | ||| ||||||||||||||||||||||||| ||||| ||||||||||||    
T  30834999 caatcgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtg 30834917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 334 - 423
Target Start/End: Complemental strand, 33160816 - 33160726
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatt 423  Q
    ||||| |||||||||||||||| |||| |||| | ||| |||||||||||||||||||| |||||||||| |||||||||||| ||| |||    
T  33160816 caatcgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtacattgggtcgtacgcatcaatcgtgacacgatt 33160726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 312 - 402
Target Start/End: Complemental strand, 3809407 - 3809320
Alignment:
Q  312 ccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgta 402  Q
    |||||||||||||||||||||| || | |||||||||||| ||| ||   || | |||| |||||||||||||||||||||||||||||||    
T  3809407 ccaatcgtgacacgattttggggaaacgtgacacgattttcggcttg---ggaaagttttcaggataaggttggtcgtaccttgggtcgta 3809320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 5406484 - 5406420
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| | ||||||| |||| ||||||||||||||||||||||| |||||    
T  5406484 aaacttgggaaatcaaaggaggcaactttagggtttagggtctttgattagagttctctcgggtt 5406420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 5410809 - 5410745
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| | ||||||| |||| ||||||||||||||||||||||| |||||    
T  5410809 aaacttgggaaatcaaaggaggcaactttagggtttagggtctttgattagagttctctcgggtt 5410745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 5413678 - 5413614
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| | ||||||| |||| ||||||||||||||||||||||| |||||    
T  5413678 aaacttgggaaatcaaaggaggcaactttagggtttagggtctttgattagagttctctcgggtt 5413614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 16554358 - 16554458
Alignment:
Q  113 acttggtgtagttagatgcaagggaaaagaaaa-ggagaatggtggttcattgttaaagtggcatcatcatcattttag-agtcaaggtggagaaatgtt 210  Q
    |||||||  |||| ||||||||||||||||||| ||||| |||||||| || |||||||||||||||||  ||  |||| ||||||||||||||||||||    
T  16554358 acttggtagagttggatgcaagggaaaagaaaagggagattggtggttgatggttaaagtggcatcatcgccaaattagaagtcaaggtggagaaatgtt 16554457  T
Q  211 g 211  Q
    |    
T  16554458 g 16554458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 16630914 - 16631014
Alignment:
Q  113 acttggtgtagttagatgcaagggaaaagaaaa-ggagaatggtggttcattgttaaagtggcatcatcatcattttag-agtcaaggtggagaaatgtt 210  Q
    |||||||  |||| ||||||||||||||||||| ||||| |||||||| || |||||||||||||||||  ||  |||| ||||||||||||||||||||    
T  16630914 acttggtagagttggatgcaagggaaaagaaaagggagattggtggttgatggttaaagtggcatcatcgccaaattagaagtcaaggtggagaaatgtt 16631013  T
Q  211 g 211  Q
    |    
T  16631014 g 16631014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 16652620 - 16652720
Alignment:
Q  113 acttggtgtagttagatgcaagggaaaagaaaagg-agaatggtggttcattgttaaagtggcatcatcatc-attttagagtcaaggtggagaaatgtt 210  Q
    |||||||  |||| ||||||||||||||||||||| ||| |||||||| || |||||||||||||||||| | | |||  ||||||||||||||||||||    
T  16652620 acttggtagagttggatgcaagggaaaagaaaagggagattggtggttgatggttaaagtggcatcatcaccaaatttgaagtcaaggtggagaaatgtt 16652719  T
Q  211 g 211  Q
    |    
T  16652720 g 16652720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 313 - 424
Target Start/End: Original strand, 5571846 - 5571957
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatc 412  Q
    |||||||| |||||||||| | || | ||||||||||||   | |||| |||||||||  ||| |||||||||||||||||||||||||| ||| |||||    
T  5571846 caatcgtgtcacgattttgagaaaacgtgacacgattttcaacttgctgggcacgtttttaggttaaggttggtcgtaccttgggtcgtacgcaccaatc 5571945  T
Q  413 gtgtcacaattt 424  Q
    ||| ||| ||||    
T  5571946 gtgacacgattt 5571957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 372 - 425
Target Start/End: Original strand, 31086114 - 31086167
Alignment:
Q  372 caggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||| |||||    
T  31086114 caggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttg 31086167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 31404960 - 31404895
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtc-tttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| | ||||||| |||| |||||| |||||||||||||||||||||||    
T  31404960 aaacttgggaaatcaaaggaggcaactttagggtttagggtcttttgattagagttctcttgggtt 31404895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 16452615 - 16452551
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||| | | |||||||  ||| |||||||||||||||||||||||||||||    
T  16452615 aaacttgggaaatcaaagtaagcaactttagagtttagggtctttgattagagttctcttgggtt 16452551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 30834822 - 30834758
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||| |||||||||||| | ||||||| |||| | |||||||||||||||||||||||||||    
T  30834822 aaacttgagaaatcaaaggaagcaactttagggtttatggtctttgattagagttctcttgggtt 30834758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 367 - 425
Target Start/End: Original strand, 5757115 - 5757173
Alignment:
Q  367 gtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||| ||||||||||||||||||||||| ||||||||| |||||||||| ||| |||||    
T  5757115 gttttcaggataaggttggtcgtacctttggtcgtatgtatcaatcgtggcacgatttg 5757173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 497 - 558
Target Start/End: Complemental strand, 3039202 - 3039142
Alignment:
Q  497 aaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttg 558  Q
    |||||||||||| |||||||| ||||||||| |||||||||||||||||||| ||| |||||    
T  3039202 aaaacttgggaa-tcaaaggaggtaactttagggttgagggtctttgattagggttttcttg 3039142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 317 - 402
Target Start/End: Original strand, 26661421 - 26661506
Alignment:
Q  317 cgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgta 402  Q
    ||||||||||||||||| ||   ||||| |||||| | | |||| | | ||||| |||||||||||||||||||||||||||||||    
T  26661421 cgtgacacgattttgggaaaatgtgacaagattttcgacttgctggactcgttttcaggataaggttggtcgtaccttgggtcgta 26661506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 317 - 402
Target Start/End: Original strand, 26767392 - 26767477
Alignment:
Q  317 cgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgta 402  Q
    ||||||||||||||||| ||   ||||| |||||| | | |||| | | ||||| |||||||||||||||||||||||||||||||    
T  26767392 cgtgacacgattttgggaaaatgtgacaagattttcgacttgctggactcgttttcaggataaggttggtcgtaccttgggtcgta 26767477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 412
Target Start/End: Complemental strand, 16452752 - 16452712
Alignment:
Q  372 caggataaggttggtcgtaccttgggtcgtatgcatcaatc 412  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  16452752 caggataaggttggtcgtaccttgggtcgtacgcatcaatc 16452712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 372 - 415
Target Start/End: Complemental strand, 31405097 - 31405054
Alignment:
Q  372 caggataaggttggtcgtaccttgggtcgtatgcatcaatcgtg 415  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||    
T  31405097 caggataaggttggtcgtaccttaggtcgtacgcatcaatcgtg 31405054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 384
Target Start/End: Original strand, 17759357 - 17759494
Alignment:
Q  246 aatcatgacacgatttgtggaccatgacacaattttcctatgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacac 345  Q
    |||| |||||||||||||| | | || ||||||||| | |||||| |||  ||| ||| |||||  |||| ||||||||||||||||| || | ||||||    
T  17759357 aatcgtgacacgatttgtgaagcgtgtcacaattttgcaatgtcgagagt-tgtattttagggtgcccaaccgtgacacgattttggggaaacgtgacac 17759455  T
Q  346 gatttttggcatgcttggcacgtttacaggataaggttg 384  Q
     ||||| ||| |||| | || |||| |||||||||||||    
T  17759456 aattttcggcttgctggacaagttttcaggataaggttg 17759494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 2171817 - 2171752
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagag-ttctcttgggtt 562  Q
    |||||||||||||||||||  | |||| || |||| ||||||||||||||||| ||||||||||||    
T  2171817 aaacttgggaaatcaaagggagcaactctagggtttagggtctttgattagagtttctcttgggtt 2171752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 367 - 424
Target Start/End: Complemental strand, 23896793 - 23896736
Alignment:
Q  367 gtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaattt 424  Q
    |||| ||||||||||||||||||||||| ||||||| | |||||||||| ||| ||||    
T  23896793 gttttcaggataaggttggtcgtaccttcggtcgtacgtatcaatcgtggcacgattt 23896736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 34166584 - 34166670
Alignment:
Q  122 agttagatgcaagggaaaagaaaaggagaatggtggttcattgttaaagtggcatcatcatcattttag-agtcaaggtggagaaatgttg 211  Q
    |||| ||||||||||||||| ||    || |||||||| || |||||||||||||||||| ||  |||| |||||||||||||||||||||    
T  34166584 agttggatgcaagggaaaaggaa----gattggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg 34166670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 24543205 - 24543165
Alignment:
Q  186 tttagagtcaaggtggagaaatgttgcaaagtgactcaaaa 226  Q
    |||||||||||||||||||||||||  ||||||||||||||    
T  24543205 tttagagtcaaggtggagaaatgttagaaagtgactcaaaa 24543165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 411991 - 412056
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagag-ttctcttgggtt 562  Q
    ||||||| |||||||||||  |||||| || |||| || |||||||||||||| ||||||||||||    
T  411991 aaacttgagaaatcaaagggagtaactctagggtttagagtctttgattagagcttctcttgggtt 412056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 3073039 - 3072974
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagag-ttctcttgggtt 562  Q
    |||||||||||||||||||  | |||| || |||| || |||||||||||||| ||||||||||||    
T  3073039 aaacttgggaaatcaaagggagaaactctagggtttagagtctttgattagagcttctcttgggtt 3072974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 340 - 448
Target Start/End: Complemental strand, 24714860 - 24714752
Alignment:
Q  340 tgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacac 439  Q
    ||||||||||||   | |||| ||||||||| ||||||||| ||||||||||  |||||| || |   ||| |||||||| || || ||||| |||||||    
T  24714860 tgacacgattttcaacttgctgggcacgttttcaggataagattggtcgtactgtgggtcatacgatccaaccgtgtcacgatatggccaatcgtgacac 24714761  T
Q  440 atttttgac 448  Q
    | |||||||    
T  24714760 aattttgac 24714752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 8e-44; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 246 - 559
Target Start/End: Original strand, 49917969 - 49918292
Alignment:
Q  246 aatcatgacacgatttgtggaccatgacacaattttcctatgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacac 345  Q
    |||| |||||||||||||| | | || ||||||||| | |||||| |||| |||||| ||||||  ||||||||||||||||||| |  || | ||||||    
T  49917969 aatcgtgacacgatttgtgaagcgtgtcacaattttgcaatgtcgagagc-tgttttgcagggtgcccaatcgtgacacgattttcgaaaaacgtgacac 49918067  T
Q  346 gatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacattttt 445  Q
    |||||||  | |||| ||||||||| |||||||||||||||| ||||||||||||||  || |||||||||||| |||||   || ||||||||  ||||    
T  49918068 gatttttaacttgctgggcacgttttcaggataaggttggtcataccttgggtcgtacacaccaatcgtgtcacgatttgggaaaatgtgacacgatttt 49918167  T
Q  446 gacaactgaagtctttaatgtaaatgtttctttgcagattttgaag-aga---tga--------aaacttgggaaatcaaaggacgtaactttatggttg 533  Q
    |||| |||||| ||   || ||| || ||||||||||||||||||| |||   |||        |||||||||||||||||||| ||||||||| |||||    
T  49918168 gacagctgaagactgctatataagtg-ttctttgcagattttgaagtagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttg 49918266  T
Q  534 agggtctttgattagagttctcttgg 559  Q
    | ||||||||||||||||||||||||    
T  49918267 aaggtctttgattagagttctcttgg 49918292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 297 - 562
Target Start/End: Original strand, 31658908 - 31659184
Alignment:
Q  297 tgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgg 396  Q
    |||||| ||||||  |||||||||||||||||||||| || | |||||| |||||| || |||| || | |||| ||||||||||||||| |||||||||    
T  31658908 tgttttgcagggtgcccaatcgtgacacgattttgggaaaacgtgacacaattttttgcttgctgggaaagttttcaggataaggttggttgtaccttgg 31659007  T
Q  397 gtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttga-agaga- 494  Q
    |||||| ||| ||| |||||||| |||||   || ||||||||  ||||||||  ||||| ||   || ||| || ||||||||||||||||| |||||     
T  31659008 gtcgtacgcaccaaacgtgtcacgatttggtaaaatgtgacacgattttgacagttgaagactgctatataagtg-ttctttgcagattttgagagagag 31659106  T
Q  495 --tga--------aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
      |||        |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  31659107 cttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggtt 31659184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 314 - 562
Target Start/End: Original strand, 3156554 - 3156812
Alignment:
Q  314 aatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcg 413  Q
    |||||||||||||||||||| || ||| |||||||||||||  |||| | ||||||| ||||||||||||||||||||||||| || ||  || ||| ||    
T  3156554 aatcgtgacacgattttgggaaaacataacacgatttttggtttgctggacacgttttcaggataaggttggtcgtaccttgg-tcatacacaccaaacg 3156652  T
Q  414 tgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttgaag------------agatgaaaac 501  Q
    ||||||  |||| | ||  || ||||| |||||||| |||||| || | || ||| |||| |||||||||||||||||            |||   ||||    
T  3156653 tgtcaccgtttggcaaaacgtaacacaattttgacagctgaagactgttatataagtgtt-ctttgcagattttgaaggagagctggaagagagagaaac 3156751  T
Q  502 ttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  3156752 ttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggtt 3156812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 246 - 491
Target Start/End: Complemental strand, 4553197 - 4552952
Alignment:
Q  246 aatcatgacacgatttgtggaccatgacacaattttcctatgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacac 345  Q
    |||| |||||||||||||| | | || ||| ||||  | ||| ||||| |||||||| |||||| ||||||||||||||||||||| | || | ||| |     
T  4553197 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgaacatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgatat 4553098  T
Q  346 gatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacattttt 445  Q
    |||||| | | || ||| ||||||| |||||||||||| |||||| | || |||||| ||||||| |||||||| ||||| | ||  ||||||| |||||    
T  4553097 gattttcgacttgtttgacacgttttcaggataaggttagtcgtatcgtgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgttttt 4552998  T
Q  446 gacaactgaagtctttaatgtaaatgtttctttgcagattttgaag 491  Q
    |||| |||||| || | || ||| ||||||||||||||||||||||    
T  4552997 gacagctgaagactgttatataagtgtttctttgcagattttgaag 4552952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 285 - 446
Target Start/End: Complemental strand, 37033797 - 37033636
Alignment:
Q  285 atgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttg 384  Q
    |||||||||||||||||| |||||| |||||||||||||||||||| || || |||||||||||||| | | |||  |||| |||| |||||||||||||    
T  37033797 atgtcgtgagcatgttttgcagggtgtccaatcgtgacacgattttcgggaaacatgacacgattttcgccttgcagggcaagttttcaggataaggttg 37033698  T
Q  385 gtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttg 446  Q
    || ||||||||||||||| ||| ||| |||||||| |||||   ||| |||||||| |||||    
T  37033697 gttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacacaattttg 37033636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 313 - 445
Target Start/End: Original strand, 16455332 - 16455464
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatc 412  Q
    ||||||||| ||||||||| |||||| ||||| ||||||||| ||| ||||||||||| ||||||||| ||| ||||||||||||||||| ||||||| |    
T  16455332 caatcgtgatacgattttgagcaatcgtgacatgatttttggtatgtttggcacgttttcaggataagtttgctcgtaccttgggtcgtacgcatcaacc 16455431  T
Q  413 gtgtcacaatttgaccaattgtgacacattttt 445  Q
    ||| ||| ||||| ||||| ||||||| |||||    
T  16455432 gtgacacgatttggccaatcgtgacacgttttt 16455464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 297 - 562
Target Start/End: Original strand, 10924893 - 10925169
Alignment:
Q  297 tgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgg 396  Q
    |||||| ||||||  |||||||||||||||||||||  ||   |||||||||||| ||| || | |||| |||| ||  |||| ||||||| ||||||||    
T  10924893 tgttttgcagggtacccaatcgtgacacgattttggaaaaatgtgacacgattttcggcttggtaggcaagttttcaaaataaagttggtcataccttgg 10924992  T
Q  397 gtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttgaa-gaga- 494  Q
    ||| || ||||||| |||||||| ||||| | ||  |||||||  |||||||| |||||| || | || ||| || |||||||||||||||||| ||||     
T  10924993 gtcatacgcatcaaccgtgtcacgatttggcaaaacgtgacacgattttgacagctgaagactgttatataagtg-ttctttgcagattttgaaggagag 10925091  T
Q  495 --tga--------aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
      |||        |||||||| ||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  10925092 cttgaagagagagaaacttggaaaatcaaaggaggtaactttagggttgagggtctttgattatagttctcttgggtt 10925169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 297 - 562
Target Start/End: Complemental strand, 28223920 - 28223643
Alignment:
Q  297 tgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcat-gcttggcacgtttacaggataaggttggtcgtaccttg 395  Q
    |||||| ||||||  |||||||||||||||||||||| || | |||||||||||| ||| | ||  | || || |  | |||||||||||||||||||||    
T  28223920 tgttttgcagggtgcccaatcgtgacacgattttgggaaaacgtgacacgattttcggctttgcacgacaagtatttaagataaggttggtcgtaccttg 28223821  T
Q  396 ggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttgaag---- 491  Q
    ||||||| |||  || ||||||||||||||   ||  |||||||  |||||||| |||||| ||   || ||| |||| |||||||||||||||||        
T  28223820 ggtcgtacgcacaaaacgtgtcacaatttgggaaaacgtgacacgattttgacagctgaagactgctatataagtgtt-ctttgcagattttgaaggtga 28223722  T
Q  492 --------agatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
            |||   |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  28223721 gcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggtt 28223643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 297 - 562
Target Start/End: Complemental strand, 28220725 - 28220448
Alignment:
Q  297 tgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcat-gcttggcacgtttacaggataaggttggtcgtaccttg 395  Q
    |||||| ||||||  |||||||||||||||||||||| || | |||||||||||| ||| | ||  | || || |  | |||||||||||||||||||||    
T  28220725 tgttttgcagggtgcccaatcgtgacacgattttgggaaaacgtgacacgattttcggctttgcacgacaagtatttaagataaggttggtcgtaccttg 28220626  T
Q  396 ggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttgaag---- 491  Q
    ||||||| |||  || |||||||| |||||   ||  |||||||  |||||||| |||||| ||   || ||| |||| |||||||||||||||||        
T  28220625 ggtcgtacgcacaaaacgtgtcacgatttgggaaaacgtgacacgattttgacagctgaagactgctatataagtgtt-ctttgcagattttgaaggtga 28220527  T
Q  492 --------agatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
            |||   |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  28220526 gcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggtt 28220448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 340 - 560
Target Start/End: Original strand, 46064631 - 46064862
Alignment:
Q  340 tgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacac 439  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||| | ||||| |||| ||| ||||| |||||  || |||    
T  46064631 tgacacgatttttggcatgcttggcacattttcaggataaagttggtcgtaccttgggtcgtacgtatcaaccgtgacacgatttggccaatcatgtcac 46064730  T
Q  440 atttttgacaactgaagtctttaatgtaaatgtttc-------ttt----gcagattttgaagagatgaaaacttgggaaatcaaaggacgtaactttat 528  Q
      |||||||| |||||| || | || ||| |||| |       |||    | |||  || ||||||  ||||||||||||||||||| | ||||||||||    
T  46064731 gattttgacagctgaagactgttatttaagtgttccaattcaatttttaaggagagcttcaagagagaaaaacttgggaaatcaaagaaggtaactttat 46064830  T
Q  529 ggttgagggtctttgattagagttctcttggg 560  Q
     ||||||||||||||||||  |||||||||||    
T  46064831 tgttgagggtctttgattatggttctcttggg 46064862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 111 - 226
Target Start/End: Original strand, 776751 - 776866
Alignment:
Q  111 ctacttggtgtagttagatgcaagggaaaagaaaaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaaatgtt 210  Q
    ||||||||||||||| ||||||||| ||   |||||||||||||||||| || ||||||||  ||||| ||||| |||||||||||||||||||||||||    
T  776751 ctacttggtgtagttggatgcaaggaaatgcaaaaggagaatggtggttgatggttaaagttccatcaccatcaatttagagtcaaggtggagaaatgtt 776850  T
Q  211 gcaaagtgactcaaaa 226  Q
    | || ||| |||||||    
T  776851 gaaatgtgtctcaaaa 776866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 246 - 424
Target Start/End: Original strand, 11348121 - 11348298
Alignment:
Q  246 aatcatgacacgatttgtggaccatgacacaattttcctatgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacac 345  Q
    |||| |||||||||||||| | | || ||| ||||| | |||||| |||| |||||| |||||| || |||||||||||||||||||  || | ||||||    
T  11348121 aatcgtgacacgatttgtgaagcgtgtcacgattttgcaatgtcgagagc-tgttttgcagggtgtctaatcgtgacacgattttggagaaacgtgacac 11348219  T
Q  346 gatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaattt 424  Q
    |||||| ||| || | |||| |||| |||||||||||||||||||| |||| ||||| ||| ||| |||||||| ||||    
T  11348220 gattttcggcttgttgggcaagttttcaggataaggttggtcgtacattggatcgtacgcaccaaacgtgtcacgattt 11348298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 489 - 562
Target Start/End: Complemental strand, 197203 - 197130
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  197203 aagagaggaaaacttggaaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggtt 197130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 489 - 562
Target Start/End: Complemental strand, 3847416 - 3847343
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| |||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||    
T  3847416 aagagaggaaaacttgggaaatcaaaggaggtaactttagggtcgagggtctttgattagagttctcttgggtt 3847343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 300 - 415
Target Start/End: Original strand, 20762344 - 20762460
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggt 398  Q
    |||||||||  ||||||||||||||||||||||| |||| |||||||||||||||| || | |||| | ||| ||||||||||||||||||||||| | |    
T  20762344 ttttcagggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgttgggcaagattttcaggataaggttggtcgtacctttgat 20762443  T
Q  399 cgtatgcatcaatcgtg 415  Q
    || | ||||||||||||    
T  20762444 cgaacgcatcaatcgtg 20762460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 492 - 562
Target Start/End: Complemental strand, 834459 - 834389
Alignment:
Q  492 agatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  834459 agataaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctcttgggtt 834389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 559
Target Start/End: Original strand, 1833205 - 1833465
Alignment:
Q  311 tccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgttta-caggataaggttggtcgtaccttgggtcgtatgcatca 409  Q
    |||||| |||||||||||||||| || ||| |||||||||||||| ||||  | || |||  || ||||||||||||| |||||||||| ||| ||| ||    
T  1833205 tccaatggtgacacgattttgggaaaacataacacgatttttggcttgctgagtacatttttcaagataaggttggtcataccttgggttgtacgcacca 1833304  T
Q  410 atcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttgaa---gagat--------ga- 497  Q
    | |||||||| |||||   ||  |||||||  |||||||| |||||| ||   || ||| | || ||||||||||||||||   |||||        ||     
T  1833305 aacgtgtcacgatttgcgaaaacgtgacacgattttgacagctgaagactcctatataagtatt-ctttgcagattttgaatgagagattgaagagagag 1833403  T
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgg 559  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||    
T  1833404 aaacttgggaaatcaaaggagataactttaaggttgagggtctttgattagagttctcttgg 1833465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 489 - 563
Target Start/End: Complemental strand, 8551082 - 8551008
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtta 563  Q
    |||||| ||||||||||||||||||||||  |||||||| |||| ||||||||||||||||||||||||||||||    
T  8551082 aagagaggaaaacttgggaaatcaaaggagttaactttagggttaagggtctttgattagagttctcttgggtta 8551008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 365 - 491
Target Start/End: Complemental strand, 13598863 - 13598737
Alignment:
Q  365 acgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaat 464  Q
    |||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||  |||  |||||||  |||||||| |||||| ||   ||    
T  13598863 acgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacaatttggacaaacgtgacacgattttgacagctgaagactgctat 13598764  T
Q  465 gtaaatgtttctttgcagattttgaag 491  Q
     ||||||||  | ||||||||||||||    
T  13598763 ataaatgttcttgtgcagattttgaag 13598737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 562
Target Start/End: Original strand, 44454843 - 44455106
Alignment:
Q  311 tccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaa 410  Q
    ||||||||||||||||||||||| || | |||||||||||| ||| |||| |||| |||| || |||||||||||| ||||||||||||||| |||  ||    
T  44454843 tccaatcgtgacacgattttggggaaacgtgacacgattttcggcttgctgggcaagttttcaagataaggttggttgtaccttgggtcgtacgcactaa 44454942  T
Q  411 tcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttgaag------------agatgaa 498  Q
     |||||||| ||||| | ||  ||| |||  ||||||||  || ||  |   || ||| ||||  | ||||||||||||||            |||   |    
T  44454943 acgtgtcacgatttggcaaaacgtggcacgattttgacagttgcagggtactatttaagtgttcttgtgcagattttgaaggagaggttgtagagagaga 44455042  T
Q  499 aacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||| ||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||    
T  44455043 aacttggtaaatcaaaggaggtaactttagggttgagggtctttgattagagttttcttgggtt 44455106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 111 - 226
Target Start/End: Complemental strand, 50167839 - 50167718
Alignment:
Q  111 ctacttggtgtagttagatgcaagg-----gaaaag-aaaaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggaga 204  Q
    ||||||||||||||| |||||||||     |||||| |||||||||||||||||| || ||||||||  ||||| ||||| |||||||||||||||||||    
T  50167839 ctacttggtgtagttggatgcaaggaaaaggaaaaggaaaaggagaatggtggttgatggttaaagtttcatcaccatcaatttagagtcaaggtggaga 50167740  T
Q  205 aatgttgcaaagtgactcaaaa 226  Q
    ||||||| || ||| |||||||    
T  50167739 aatgttgaaatgtgtctcaaaa 50167718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 3189213 - 3189277
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  3189213 aaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctcttgggtt 3189277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 3198030 - 3198094
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  3198030 aaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctcttgggtt 3198094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 3206869 - 3206933
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  3206869 aaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctcttgggtt 3206933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 300 - 425
Target Start/End: Original strand, 3189023 - 3189150
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttac-aggataaggttggtcgt-accttggg 397  Q
    |||||||||  |||||||||||||| |||||||| || | |||||||||||| | | |||| |||| ||||   ||||||||||||||||| ||||||||    
T  3189023 ttttcagggcgtccaatcgtgacacaattttgggaaaacgtgacacgattttcgacttgctgggcaagttttttaggataaggttggtcgttaccttggg 3189122  T
Q  398 tcgtatgcatcaatcgtgtcacaatttg 425  Q
    ||||| |||||||||||| |||||||||    
T  3189123 tcgtacgcatcaatcgtgacacaatttg 3189150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 300 - 425
Target Start/End: Original strand, 3197840 - 3197967
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttac-aggataaggttggtcgt-accttggg 397  Q
    |||||||||  |||||||||||||| |||||||| || | |||||||||||| | | |||| |||| ||||   ||||||||||||||||| ||||||||    
T  3197840 ttttcagggcgtccaatcgtgacacaattttgggaaaacgtgacacgattttcgacttgctgggcaagttttttaggataaggttggtcgttaccttggg 3197939  T
Q  398 tcgtatgcatcaatcgtgtcacaatttg 425  Q
    ||||| |||||||||||| |||||||||    
T  3197940 tcgtacgcatcaatcgtgacacaatttg 3197967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 300 - 425
Target Start/End: Original strand, 3206658 - 3206785
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttac-aggataaggttggtcgt-accttggg 397  Q
    |||||||||  |||||||||||||| |||||||| || | |||||||||||| | | |||| |||| ||||   ||||||||||||||||| ||||||||    
T  3206658 ttttcagggcgtccaatcgtgacacaattttgggaaaacgtgacacgattttcgacttgctgggcaagttttttaggataaggttggtcgttaccttggg 3206757  T
Q  398 tcgtatgcatcaatcgtgtcacaatttg 425  Q
    ||||| |||||||||||| |||||||||    
T  3206758 tcgtacgcatcaatcgtgacacaatttg 3206785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 497 - 560
Target Start/End: Complemental strand, 13138261 - 13138198
Alignment:
Q  497 aaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttggg 560  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||    
T  13138261 aaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagggttctcttggg 13138198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 497 - 562
Target Start/End: Complemental strand, 928265 - 928200
Alignment:
Q  497 aaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||  ||||||||||||    
T  928265 aaaacttgggaaatcaaaggaggtaactttatggttgaaggtctttgattaggattctcttgggtt 928200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 489 - 562
Target Start/End: Complemental strand, 13659631 - 13659558
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||||| ||||||||||||||||||| |||||||   ||||||||||||||||||||||||||||| ||||    
T  13659631 aagagatgacaacttgggaaatcaaaggaggtaacttgtgggttgagggtctttgattagagttctcttaggtt 13659558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 497 - 558
Target Start/End: Original strand, 15820188 - 15820249
Alignment:
Q  497 aaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttg 558  Q
    |||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||    
T  15820188 aaaacttgggaaatcaaaagaggtaactttagggttgagggtctttgattagagttctcttg 15820249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 20762554 - 20762618
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| | ||||||| |||| |||||||||||||||||||||||||||||    
T  20762554 aaacttgggaaatcaaaggaagcaactttagggtttagggtctttgattagagttctcttgggtt 20762618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 37503840 - 37503776
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| || |||||| |||||||||||||||||||||||||| |||||||    
T  37503840 aaacttgggaaatcaaaggaggtgactttagggttgagggtctttgattagagttctattgggtt 37503776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 37560155 - 37560091
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||| ||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||    
T  37560155 aaacttgagaaatcaaatgaggtaactttaaggttgagggtctttgattagagttctcttgggtt 37560091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 335 - 415
Target Start/End: Complemental strand, 13316779 - 13316698
Alignment:
Q  335 aatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtg 415  Q
    |||| |||||||||||||||| |||| |||| | ||| ||||||||||||||||||||||||| ||||| ||||||||||||    
T  13316779 aatcgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtg 13316698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 13547922 - 13547837
Alignment:
Q  144 aaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaaatgttg-caaagtgactcaaaaat 228  Q
    |||||||||||||||| || |||||| | |||||||||||||||||||||||| |||||||| |||||  || |||||||||||||    
T  13547922 aaggagaatggtggttgatggttaaattagcatcatcatcattttagagtcaatgtggagaattgttgagaatgtgactcaaaaat 13547837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 497 - 562
Target Start/End: Complemental strand, 23555552 - 23555487
Alignment:
Q  497 aaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||||||||||||||||| ||||||| | |||||||| |||||||||| ||||||||||||||    
T  23555552 aaaacttgggaaatcaaaggaggtaacttcagggttgaggatctttgattaaagttctcttgggtt 23555487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 13316604 - 13316540
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||  | ||||||| |||| |||||||||||||||||||||||||||||    
T  13316604 aaacttgggaaatcaaaggtagcaactttagggtttagggtctttgattagagttctcttgggtt 13316540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 29135763 - 29135847
Alignment:
Q  340 tgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaattt 424  Q
    ||||| ||||||  || |||| ||||||||| ||||||||||||||||||||||||||||||| ||| ||| |||||||| ||||    
T  29135763 tgacatgattttcagcttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgattt 29135847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 558
Target Start/End: Complemental strand, 50167474 - 50167414
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttg 558  Q
    ||||| |||||||||||||| ||||||||| |||||||||||||||||||| |||||||||    
T  50167474 aaactagggaaatcaaaggaggtaactttagggttgagggtctttgattagggttctcttg 50167414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 290 - 417
Target Start/End: Original strand, 193057 - 193184
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgt 389  Q
    ||||||||| ||| |||||| ||||||| |||||| |||||||  || | ||| || ||||| ||| |||| |||| ||||  |||||||| ||||||||    
T  193057 gtgagcatggtttgcagggtgtccaatcatgacacaattttggaaaaacgtgataccattttcggcttgctgggcaagtttttaggataagattggtcgt 193156  T
Q  390 accttgggtcgtatgcatcaatcgtgtc 417  Q
    ||||||||||||| ||| ||| ||||||    
T  193157 accttgggtcgtacgcaccaaacgtgtc 193184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 497 - 559
Target Start/End: Complemental strand, 40122485 - 40122423
Alignment:
Q  497 aaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgg 559  Q
    ||||||||||||||||||||| |||||||||||||||||| || || ||||||||| ||||||    
T  40122485 aaaacttgggaaatcaaaggaggtaactttatggttgaggatcattaattagagttatcttgg 40122423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 425
Target Start/End: Complemental strand, 37070283 - 37070170
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacgatttttgg-catgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaat 411  Q
    |||||||| |||||||||||| || | ||||||||||||    | || | || |||||| ||||||||||||||||||||||||||||||| ||| ||||    
T  37070283 caatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaat 37070184  T
Q  412 cgtgtcacaatttg 425  Q
    |||| ||| |||||    
T  37070183 cgtgccacgatttg 37070170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 497 - 562
Target Start/End: Complemental strand, 45644642 - 45644577
Alignment:
Q  497 aaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| ||||||||||||||  |||||||| |||||||||||||||||||| |||||||| ||||    
T  45644642 aaaactagggaaatcaaaggagataactttagggttgagggtctttgattagggttctcttaggtt 45644577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 498 - 558
Target Start/End: Original strand, 777112 - 777172
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttg 558  Q
    ||||| |||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||    
T  777112 aaactagggaaatcaaaggaggtaactttagggttgatggtctttgattagggttctcttg 777172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 498 - 558
Target Start/End: Complemental strand, 28265852 - 28265793
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttg 558  Q
    ||||| |||||||||||||| ||||||||| |||||||||||||||||||| |||||||||    
T  28265852 aaactagggaaatcaaaggaggtaactttagggttgagggtctttgattag-gttctcttg 28265793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 439
Target Start/End: Complemental strand, 22819918 - 22819819
Alignment:
Q  340 tgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacac 439  Q
    ||||| ||||||| ||||| ||| ||||||| ||| ||||| ||||||||||||||||||||| ||||| | |||  ||||||||  ||||| |||||||    
T  22819918 tgacatgatttttcgcatgtttgacacgttttcagaataagtttggtcgtaccttgggtcgtacgcatcgaccgtaacacaattttgccaatcgtgacac 22819819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 491
Target Start/End: Complemental strand, 29652269 - 29652150
Alignment:
Q  372 caggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatg 471  Q
    |||||||||||||||||||||||||||||||  || |||||||||||| |||||  |||  ||||||   |||||||| |||||| ||   || ||| ||    
T  29652269 caggataaggttggtcgtaccttgggtcgtacacaccaatcgtgtcacgatttggacaaacgtgacatgattttgacagctgaagactgctatataagtg 29652170  T
Q  472 tttctttgcagattttgaag 491  Q
    ||| | ||||||||||||||    
T  29652169 tttttgtgcagattttgaag 29652150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 367 - 425
Target Start/End: Original strand, 13604259 - 13604317
Alignment:
Q  367 gtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||| ||||||||||||||||||||||||||||||| | |||||||||| ||| |||||    
T  13604259 gttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtgacacgatttg 13604317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 28221542 - 28221484
Alignment:
Q  111 ctacttggtgtagttagatgcaagggaaaagaaaaggagaatggtggttcattgttaaa 169  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||||| || ||||||    
T  28221542 ctacttggtgtagttggatgcaagggaaaagaaaaggatcatggtggttgatggttaaa 28221484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 41360441 - 41360545
Alignment:
Q  121 tagttagatgcaagggaaaagaaaaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaaatgttgcaaagtgac 220  Q
    ||||| ||||||||| | | ||| || |||||||||||| || |||||  || ||||| |||||  ||||||||||||||||||||||||| ||| ||||    
T  41360441 tagttggatgcaaggaatatgaagagaagaatggtggttgatggttaat-tgacatcaccatcaaattagagtcaaggtggagaaatgttgaaaattgac 41360539  T
Q  221 tcaaaa 226  Q
    ||||||    
T  41360540 tcaaaa 41360545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 51765277 - 51765342
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagag-ttctcttgggtt 562  Q
    |||||||||||||||||||  |||||| || |||| ||||||||||||||||| ||||||||||||    
T  51765277 aaacttgggaaatcaaagggagtaactctagggtttagggtctttgattagagcttctcttgggtt 51765342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 562
Target Start/End: Complemental strand, 30476908 - 30476670
Alignment:
Q  335 aatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgt 434  Q
    |||| |||||||||||| ||  |||| |||| |||| || |||||||||||| | |||||||||||||  || ||| |||||||| |||||   ||  ||    
T  30476908 aatcgtgacacgattttcggtttgctgggcaagttttcaagataaggttggttgaaccttgggtcgtacacaccaaacgtgtcacgatttgggaaaacgt 30476809  T
Q  435 gacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttgaa-gaga---tga--------aaacttgggaaatcaaaggacgtaa 522  Q
    |||||  |||||||| |||||| ||   || ||| || |||||||||||||||||| ||||   |||        ||||||||||||||||| || ||||    
T  30476808 gacacgattttgacagctgaagactgctatataagtg-ttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaatgatgtaa 30476710  T
Q  523 ctttatggttgagggtctttgattagagttctcttgggtt 562  Q
      ||| || ||||||| |||||||||||||||||||||||    
T  30476709 tgttagggctgagggtatttgattagagttctcttgggtt 30476670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 31658721 - 31658812
Alignment:
Q  111 ctacttggtgtagttagatgcaagggaaaagaaaa-ggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtgga 202  Q
    ||||||||||||||| ||||||| ||||||||||| || || |||||||| || ||||||||| ||||||||||| |||  || |||||||||    
T  31658721 ctacttggtgtagttggatgcaa-ggaaaagaaaagggggattggtggttgatggttaaagtgacatcatcatcaatttgaaggcaaggtgga 31658812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 50169496 - 50169432
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||| |||||||||||||| ||||||||| |||||||||| ||| ||||| ||| |||||||||    
T  50169496 aaactagggaaatcaaaggaggtaactttagggttgagggttttttattagggttatcttgggtt 50169432  T

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Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 499 - 562
Target Start/End: Complemental strand, 4552922 - 4552859
Alignment:
Q  499 aacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||| |||||| ||||||||| |||||||||||||| |||   |||||||||||||    
T  4552922 aacttgggaaattaaaggaggtaactttagggttgagggtctttaattgaggttctcttgggtt 4552859  T

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Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 19753902 - 19753969
Alignment:
Q  144 aaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaaatgttg 211  Q
    |||||||||||||||| || |||||| | | ||||||||||||||| |||||||||| |||| |||||    
T  19753902 aaggagaatggtggttgatggttaaattaggatcatcatcattttatagtcaaggtgaagaattgttg 19753969  T

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Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 426
Target Start/End: Complemental strand, 3282222 - 3282108
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacgatttttgg-catgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaat 411  Q
    |||||||| |||||||||| | || | ||||||||||||    | |||| || |||||| || ||||||||||||| |||||||||||||| ||| ||||    
T  3282222 caatcgtgtcacgattttgagaaaacgtgacacgattttcaaacttgctgggtacgttttcaagataaggttggtcataccttgggtcgtacgcaccaat 3282123  T
Q  412 cgtgtcacaatttga 426  Q
    |||| ||| ||||||    
T  3282122 cgtgccacgatttga 3282108  T

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Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 425
Target Start/End: Complemental strand, 13547766 - 13547677
Alignment:
Q  335 aatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||| |||||| |||||  || |||| ||||||||| ||  ||||||||||||||||||||||||||| ||| ||| |||||||| |||||    
T  13547766 aatcgtgacacaattttcagcttgctgggcacgttttcaa-ataaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacgatttg 13547677  T

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Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 425
Target Start/End: Complemental strand, 13549677 - 13549588
Alignment:
Q  335 aatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||| |||||| |||||  || |||| ||||||||| ||  ||||||||||||||||||||||||||| ||| ||| |||||||| |||||    
T  13549677 aatcgtgacacaattttcagcttgctgggcacgttttcaa-ataaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacgatttg 13549588  T

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Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 415
Target Start/End: Original strand, 21536205 - 21536255
Alignment:
Q  365 acgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtg 415  Q
    |||||| |||||| |||||||||||||||||||||||| ||| ||||||||    
T  21536205 acgttttcaggatgaggttggtcgtaccttgggtcgtacgcaccaatcgtg 21536255  T

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Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 373 - 410
Target Start/End: Original strand, 15820053 - 15820090
Alignment:
Q  373 aggataaggttggtcgtaccttgggtcgtatgcatcaa 410  Q
    |||||||||||||||||||||||||||||| |||||||    
T  15820053 aggataaggttggtcgtaccttgggtcgtacgcatcaa 15820090  T

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Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 402
Target Start/End: Complemental strand, 13659782 - 13659696
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgta 402  Q
    ||||||||| ||||||||||| ||   || ||||||||| ||| |||||| |||||| |||   |||||||||||||||| |||||||||    
T  13659782 caatcgtgatacgattttgggaaaatgtgtcacgattttcggcttgcttgacacgttgaca---taaggttggtcgtaccgtgggtcgta 13659696  T

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Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 47703333 - 47703404
Alignment:
Q  153 ggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaaatgttgcaaagtgactcaa 224  Q
    ||||||| || |||||| || ||||| || || ||||||||||||||||| |||||||| ||| ||||||||    
T  47703333 ggtggttgatggttaaattgacatcaccaccaatttagagtcaaggtggataaatgttgtaaattgactcaa 47703404  T

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Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 31928509 - 31928443
Alignment:
Q  144 aaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaaatgtt 210  Q
    |||||| | ||||||| || |||||| |||||||| ||| | |||||||||||||||||||| ||||    
T  31928509 aaggagcaaggtggttgatggttaaattggcatcaccataaatttagagtcaaggtggagaattgtt 31928443  T

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Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 398
Target Start/End: Original strand, 16124294 - 16124327
Alignment:
Q  365 acgtttacaggataaggttggtcgtaccttgggt 398  Q
    |||||| |||||||||||||||||||||||||||    
T  16124294 acgttttcaggataaggttggtcgtaccttgggt 16124327  T

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Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 350
Target Start/End: Original strand, 9986895 - 9986931
Alignment:
Q  314 aatcgtgacacgattttgggcaatcatgacacgattt 350  Q
    |||||||||||||||||||| |||| |||||||||||    
T  9986895 aatcgtgacacgattttgggaaatcgtgacacgattt 9986931  T

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Target: chr3 (Bit Score: 88; Significance: 5e-42; HSPs: 102)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 290 - 562
Target Start/End: Original strand, 29812725 - 29813009
Alignment:
Q  290 gtgagcatgttttt-cagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcg 388  Q
    ||||||||| |||| |||||| ||||||||||||||||||||||| || | |||||||||||||| | |||| |||| |||| |||||||||||||||||    
T  29812725 gtgagcatggttttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgatttttgtcttgctgggcaagttttcaggataaggttggtcg 29812824  T
Q  389 taccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttg 488  Q
    |||||||||||||| ||| ||| |||||||| |||||   ||  |||||||  |||||||  |||||| ||   || ||| || ||||||| ||||||||    
T  29812825 taccttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacgattttgaccgctgaagactgctatataagtg-ttctttgtagattttg 29812923  T
Q  489 aaga----gatga--------aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||    | |||        |||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  29812924 aagaagaggttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctcttgggtt 29813009  T

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Target: chr3; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 111 - 402
Target Start/End: Original strand, 44331052 - 44331344
Alignment:
Q  111 ctacttggtgtagttagatgcaagggaaaagaaaaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaaatgtt 210  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||||||| || ||||||||| ||||||||||| |||  ||||||||||||||| || |    
T  44331052 ctacttggtgtagttggatacaagggaaaagaaaaggagattggtggttgatggttaaagtgacatcatcatcaatttgaagtcaaggtggagaa-tgct 44331150  T
Q  211 gcaaagtgact-caaaaatgattt--gagcatgttacaaatcatgacacgatttgtggaccatgacacaattttcctatgtcgtgagcatgtttttcagg 307  Q
    |   | || || | ||| ||| ||  ||| | || |  |||| ||||||| ||||   ||| || ||| ||||  | |||| ||||| ||||||| | ||    
T  44331151 gttta-tgccttctaaattgagtttggagaaagtgaagaatcgtgacacgctttggcaaccgtgtcacgatttcgcaatgttgtgagtatgttttgctgg 44331249  T
Q  308 gtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgta 402  Q
    || | ||||||||||||||||||||| ||   |||||||||||||||| |||| || |||||| |||||||||||||||||||||||||||||||    
T  44331250 gtgttcaatcgtgacacgattttgggaaaaagtgacacgatttttggcttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgta 44331344  T

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Target: chr3; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 289 - 424
Target Start/End: Complemental strand, 49200175 - 49200040
Alignment:
Q  289 cgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcg 388  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||| || | |||||||||||| ||| |||| |||| |||| |||||||||||||||||    
T  49200175 cgtgagcatgttttgcagggtgtccaatcgtgacacgatgttggggaaacgtgacacgattttcggcttgctgggcatgttttcaggataaggttggtcg 49200076  T
Q  389 taccttgggtcgtatgcatcaatcgtgtcacaattt 424  Q
    |||||||||||||| ||| |||  ||||||| ||||    
T  49200075 taccttgggtcgtacgcaccaaatgtgtcacgattt 49200040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 372 - 562
Target Start/End: Original strand, 40734243 - 40734444
Alignment:
Q  372 caggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatg 471  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||| |||||  |||  |||||||| |||||||| |||||| ||   || ||| ||    
T  40734243 caggataaggttggtcgtaccttggatcgtacgcatcaatcgtgtcacgatttggacaaacgtgacacaattttgacagctgaagactgctatataagtg 40734342  T
Q  472 tttctttgcagattttgaa-gaga---tga--------aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgg 559  Q
     |||||||||||||||||| ||||   |||        |||||||| |||||||||||  |||||||| |||||||||||||||||||||||||||||||    
T  40734343 -ttctttgcagattttgaaggagagcttgaagagacagaaacttggaaaatcaaaggagataactttagggttgagggtctttgattagagttctcttgg 40734441  T
Q  560 gtt 562  Q
    |||    
T  40734442 gtt 40734444  T

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Target: chr3; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 294 - 419
Target Start/End: Original strand, 4569400 - 4569525
Alignment:
Q  294 gcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtacct 393  Q
    ||||| |||| ||||| ||||||||||||| ||||||||| || | |||||||||||| ||| |||| |||| |||| ||||||||||||||||||||||    
T  4569400 gcatggtttttagggtgtccaatcgtgacatgattttgggaaaacgtgacacgattttcggcttgctgggcaagttttcaggataaggttggtcgtacct 4569499  T
Q  394 tgggtcgtatgcatcaatcgtgtcac 419  Q
    ||||||||| ||| ||| ||||||||    
T  4569500 tgggtcgtacgcaccaaccgtgtcac 4569525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 290 - 419
Target Start/End: Original strand, 46173179 - 46173307
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgt 389  Q
    ||||||||| ||| |||||| ||||||||||||||||||||||| || ||||||||||||   ||| || | ||||||||| ||||||||||||||||||    
T  46173179 gtgagcatggtttgcagggtgtccaatcgtgacacgattttgggaaaacatgacacgattcc-ggcttgttgggcacgttttcaggataaggttggtcgt 46173277  T
Q  390 accttgggtcgtatgcatcaatcgtgtcac 419  Q
    ||||||||||||| ||| ||| ||||||||    
T  46173278 accttgggtcgtacgcaccaaccgtgtcac 46173307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 300 - 415
Target Start/End: Original strand, 7761937 - 7762052
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggt 398  Q
    |||||||||  ||||||||||||||||||||||| || | |||||||||||||||| |||| |||| | ||| |||||||||||||||||||||||||||    
T  7761937 ttttcagggcgtccaatcgtgacacgattttgggaaa-cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgggt 7762035  T
Q  399 cgtatgcatcaatcgtg 415  Q
    |||| ||||||||||||    
T  7762036 cgtacgcatcaatcgtg 7762052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 298 - 562
Target Start/End: Original strand, 29810539 - 29810814
Alignment:
Q  298 gtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttggg 397  Q
    ||||| |||||| |||||||||||||||||||| |  || | |  ||| ||||||||| |||| | ||  ||| ||||||||||||||||||||||||||    
T  29810539 gttttgcagggtgtccaatcgtgacacgattttagaaaaacgtagcacaatttttggcttgctggacaaattttcaggataaggttggtcgtaccttggg 29810638  T
Q  398 tcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttgaagagatg- 496  Q
    ||||| ||| ||| |||||||| |||||   ||  |||||||  |||||||| |||||| ||   || ||| |||| ||||||| |||||||||| | |     
T  29810639 tcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgacagctgaagactgctatataagtgtt-ctttgcatattttgaagaaaagg 29810737  T
Q  497 -----------aaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
               ||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||| |||||||    
T  29810738 ttgaagaaagaaaaacttgggaaatcaaaggaggtaattttagggttgagggtctttgattagagttcttttgggtt 29810814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 290 - 424
Target Start/End: Complemental strand, 31340766 - 31340631
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaat-catgacacgatttttggcatgcttggcacgtttacaggataaggttggtcg 388  Q
    ||||||||| |||||||||| ||||||||||||| ||||||||| ||  |||||||||||||| ||| || | |||| |||| |||||||||||||||||    
T  31340766 gtgagcatggttttcagggtgtccaatcgtgacatgattttgggaaaaacatgacacgattttcggcttgttgggcaagttttcaggataaggttggtcg 31340667  T
Q  389 taccttgggtcgtatgcatcaatcgtgtcacaattt 424  Q
    |||||||||||||| ||| ||| |||| ||| ||||    
T  31340666 taccttgggtcgtacgcaccaaacgtgacacgattt 31340631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 311 - 562
Target Start/End: Complemental strand, 5236941 - 5236678
Alignment:
Q  311 tccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaa 410  Q
    |||||||||||||| |||||||| || | |||||||||||| ||| |||| || | |||| ||||||||| ||||||||||||||||||||| ||| |||    
T  5236941 tccaatcgtgacacaattttgggaaaacgtgacacgattttcggcttgctgggaaagttttcaggataagtttggtcgtaccttgggtcgtacgcaccaa 5236842  T
Q  411 tcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagatt------------ttgaagagatgaa 498  Q
     |||||||| ||||| | ||  |||||||  ||||||||  || ||  |   || ||| ||||  | ||||||||            |||||||||   |    
T  5236841 acgtgtcacgatttggcaaaacgtgacacgattttgacacttgcagggtactatttaagtgttcttgtgcagattttgaagtggggcttgaagagagaga 5236742  T
Q  499 aacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  5236741 aacttgggaaatcgaaggaggtaactttagggttgagggtctttgattagagttctcttgggtt 5236678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 489 - 562
Target Start/End: Complemental strand, 39153656 - 39153583
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  39153656 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggtt 39153583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 300 - 415
Target Start/End: Original strand, 7764124 - 7764240
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggt 398  Q
    |||||||||  ||||||||||||||||||||||| || | |||||||||||||||| || | |||| | |||  ||||||||||||||||||||||||||    
T  7764124 ttttcagggcgtccaatcgtgacacgattttgggaaaacgtgacacgatttttggcttgttgggcaagatttttaggataaggttggtcgtaccttgggt 7764223  T
Q  399 cgtatgcatcaatcgtg 415  Q
    |||| ||||||||||||    
T  7764224 cgtacgcatcaatcgtg 7764240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 300 - 415
Target Start/End: Complemental strand, 9636624 - 9636508
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggt 398  Q
    |||||||||  ||||||||||||| ||||||||| ||||||||||||||||||||| || | | || | ||| ||||||||||||||||||||||||| |    
T  9636624 ttttcagggcgtccaatcgtgacatgattttgggaaatcatgacacgatttttggcttgatggacaagattttcaggataaggttggtcgtaccttggat 9636525  T
Q  399 cgtatgcatcaatcgtg 415  Q
    |||| ||||||||||||    
T  9636524 cgtacgcatcaatcgtg 9636508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 290 - 446
Target Start/End: Complemental strand, 55302687 - 55302532
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgt 389  Q
    ||||||||  |||||||||| | ||||||||||||||||| ||| || | ||| |||||||| ||| |||| |||| |||| ||||||||||||||||||    
T  55302687 gtgagcattgttttcagggtgttcaatcgtgacacgattt-gggaaaacgtgatacgattttcggcttgctgggcaagttttcaggataaggttggtcgt 55302589  T
Q  390 accttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttg 446  Q
    ||||||||||||| ||| ||| |||||||| |||||   ||| |||||||| |||||    
T  55302588 accttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacacaattttg 55302532  T

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Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 246 - 425
Target Start/End: Original strand, 54593106 - 54593284
Alignment:
Q  246 aatcatgacacgatttgtggaccatgacacaattttcctatgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacac 345  Q
    |||||||| ||||||| || |||||| ||| |||||| || |  ||||||||| |||||| ||| | |||||||||| | |||||||| || | ||||||    
T  54593106 aatcatgatacgatttatgaaccatggcacgattttc-taggcagtgagcatggttttcatggtattcaatcgtgactcaattttgggaaaacgtgacac 54593204  T
Q  346 gatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    ||||||   | |||| ||||||||| |||||||||||||||||||| |||||||||| ||| ||| |||||||| |||||    
T  54593205 gattttcaacttgctgggcacgttttcaggataaggttggtcgtacattgggtcgtacgcaccaaacgtgtcacgatttg 54593284  T

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Target: chr3; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 246 - 424
Target Start/End: Original strand, 34490634 - 34490811
Alignment:
Q  246 aatcatgacacgatttgtggaccatgacacaattttcctatgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacac 345  Q
    |||||||||||||||||   ||| || ||| ||||  | |||||| ||| ||||||| |||||| ||||||||||||||||||||||  || | ||||||    
T  34490634 aatcatgacacgatttggcaaccgtgtcacgatttcgcaatgtcgagag-atgttttgcagggtatccaatcgtgacacgattttggaaaaacgtgacac 34490732  T
Q  346 gatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaattt 424  Q
    |||||| ||| |  | |||| |||| ||||||||||||||| ||||||||||||||| ||| ||| |||||||| ||||    
T  34490733 gattttcggcttattgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgattt 34490811  T

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Target: chr3; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 497 - 562
Target Start/End: Complemental strand, 32744713 - 32744648
Alignment:
Q  497 aaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  32744713 aaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggtt 32744648  T

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Target: chr3; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 7762148 - 7762212
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  7762148 aaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggtt 7762212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 313 - 425
Target Start/End: Complemental strand, 43404433 - 43404321
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatc 412  Q
    ||||||||||||||||||||| || | |||||||||||| ||| ||||  ||| |||| ||||||||||| ||||||||||||||||||| ||| ||| |    
T  43404433 caatcgtgacacgattttggggaaacgtgacacgattttcggcttgctgagcaagttttcaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 43404334  T
Q  413 gtgtcacaatttg 425  Q
    ||||||| |||||    
T  43404333 gtgtcacgatttg 43404321  T

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Target: chr3; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 300 - 415
Target Start/End: Original strand, 45094836 - 45094952
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggt 398  Q
    |||||||||  |||||||||||||| |||||||| |||| |||||||||||||||| || | |||| | ||| |||||||||||||||||||||||||      
T  45094836 ttttcagggcgtccaatcgtgacacaattttgggaaatcgtgacacgatttttggcttgttgggcaagattttcaggataaggttggtcgtaccttggaa 45094935  T
Q  399 cgtatgcatcaatcgtg 415  Q
    |||| ||||||||||||    
T  45094936 cgtacgcatcaatcgtg 45094952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 5258629 - 5258531
Alignment:
Q  311 tccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggtcgtatgcatc 408  Q
    ||||||||||||||||||||||| |||| |||||||||||||||| |||| |||| | ||| ||||||||||||||||||||||||  ||||| |||||    
T  5258629 tccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgaatcgtacgcatc 5258531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 489 - 562
Target Start/End: Original strand, 760720 - 760793
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| ||||||||||||||||||||||  |||||||| |||| |||||||||||||||||||||||||||||    
T  760720 aagagaggaaaacttgggaaatcaaaggagttaactttagggttaagggtctttgattagagttctcttgggtt 760793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 489 - 562
Target Start/End: Original strand, 9581156 - 9581229
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| ||||||||||||||||||||||  |||||||| |||| |||||||||||||||||||||||||||||    
T  9581156 aagagaggaaaacttgggaaatcaaaggagttaactttagggttaagggtctttgattagagttctcttgggtt 9581229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 489 - 562
Target Start/End: Complemental strand, 19684184 - 19684111
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| ||||||||||||||||||||||  |||||||| |||| |||||||||||||||||||||||||||||    
T  19684184 aagagaggaaaacttgggaaatcaaaggagttaactttagggttaagggtctttgattagagttctcttgggtt 19684111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 489 - 558
Target Start/End: Complemental strand, 22835297 - 22835228
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttg 558  Q
    |||||| |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  22835297 aagagaggaaaacttggaaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttg 22835228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 489 - 562
Target Start/End: Complemental strand, 26386776 - 26386703
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| |||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||| ||||    
T  26386776 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagagtctttgattagagttctcttaggtt 26386703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 498 - 563
Target Start/End: Original strand, 40735265 - 40735330
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtta 563  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||    
T  40735265 aaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctcttgggtta 40735330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 313 - 438
Target Start/End: Complemental strand, 43402490 - 43402365
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatc 412  Q
    ||||||||||||||||||||  || | |||||||||||| ||| |||| |||| |||| ||||||||||||||| ||| ||||||||||| ||| ||| |    
T  43402490 caatcgtgacacgattttggagaaacgtgacacgattttcggcttgctgggcaagttttcaggataaggttggttgtatcttgggtcgtacgcaccaaac 43402391  T
Q  413 gtgtcacaatttgaccaattgtgaca 438  Q
    ||||||| |||||   ||||||||||    
T  43402390 gtgtcacgatttgggaaattgtgaca 43402365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 289 - 402
Target Start/End: Complemental strand, 44331953 - 44331840
Alignment:
Q  289 cgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcg 388  Q
    |||||| ||||||| |||||| ||||||||||||||||||||||  || | |||||||||||||||| | || || |||||| || ||||| ||| ||||    
T  44331953 cgtgagtatgttttgcagggtgtccaatcgtgacacgattttggaaaaacgtgacacgatttttggcttcctgggtacgttttcaagataaagttagtcg 44331854  T
Q  389 taccttgggtcgta 402  Q
    ||||||||||||||    
T  44331853 taccttgggtcgta 44331840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 111 - 211
Target Start/End: Original strand, 29812547 - 29812645
Alignment:
Q  111 ctacttggtgtagttagatgcaagggaaaagaaaaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaaatgtt 210  Q
    ||||||||||||||| ||||||||| ||||||||||| || |||||||| || ||||||||| ||||||||||| |||  ||||||||||||||||||||    
T  29812547 ctacttggtgtagttggatgcaagg-aaaagaaaagg-gattggtggttgatggttaaagtgacatcatcatcaatttgaagtcaaggtggagaaatgtt 29812644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 486 - 562
Target Start/End: Original strand, 51398684 - 51398760
Alignment:
Q  486 ttgaagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||||||  |||||||||||||||||||| ||||||||| ||||||| |||||||||||||||| |||||||||    
T  51398684 ttgaagagatagaaacttgggaaatcaaaggaggtaactttagggttgagagtctttgattagagttttcttgggtt 51398760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 313 - 456
Target Start/End: Original strand, 40592353 - 40592496
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatc 412  Q
    |||||||| |||||||||||| || | ||||||||||||   | |||| | ||||||| ||||||||||||||||||||||||| |||||  || |||||    
T  40592353 caatcgtgtcacgattttgggaaaacgtgacacgattttcaacttgctggacacgttttcaggataaggttggtcgtaccttggatcgtacacaccaatc 40592452  T
Q  413 gtgtcacaatttgaccaattgtgacacatttttgacaactgaag 456  Q
    ||||||| |||||  |||  |||||||  |||||||| ||||||    
T  40592453 gtgtcacgatttggacaaacgtgacacgattttgacagctgaag 40592496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 291 - 425
Target Start/End: Complemental strand, 6096322 - 6096188
Alignment:
Q  291 tgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgta 390  Q
    |||||||| ||| |||||| |||||| |||||||||||||||| || | |||||||||||| ||| |  | | ||  ||| |||||||||||||||||||    
T  6096322 tgagcatggtttgcagggtgtccaattgtgacacgattttgggaaaacgtgacacgattttcggcttattggacaaattttcaggataaggttggtcgta 6096223  T
Q  391 ccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||||||||||| ||| |||  ||||||| |||||    
T  6096222 ccttgggtcgtacgcaccaaatgtgtcacgatttg 6096188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 311 - 415
Target Start/End: Original strand, 3393290 - 3393394
Alignment:
Q  311 tccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggtcgtatgcatca 409  Q
    ||||||||||||||||||||||| |||| |||||||||||||||| |||| |||| | ||| |||||||| ||||||||||||| || |||||  |||||    
T  3393290 tccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctgggcaagattttcaggataa-gttggtcgtacctaggatcgtacacatca 3393388  T
Q  410 atcgtg 415  Q
    ||||||    
T  3393389 atcgtg 3393394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 498 - 563
Target Start/End: Original strand, 7764350 - 7764415
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtta 563  Q
    |||||||||||||||||||| |||||||||  |||||||||||||||||||| |||||||||||||    
T  7764350 aaacttgggaaatcaaaggaggtaactttagagttgagggtctttgattagatttctcttgggtta 7764415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 489 - 562
Target Start/End: Original strand, 16498903 - 16498976
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||||| ||||||||||||||||||| |||||||   ||||||||||||||||||||||||||||| ||||    
T  16498903 aagagatgacaacttgggaaatcaaaggaggtaacttgtgggttgagggtctttgattagagttctcttaggtt 16498976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 5260609 - 5260545
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| | ||||||| |||| |||||||||||||||||||||||||||||    
T  5260609 aaacttgggaaatcaaaggaggcaactttagggtttagggtctttgattagagttctcttgggtt 5260545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 7763935 - 7764034
Alignment:
Q  113 acttggtgtagttagatgcaagggaaaa-gaaaagg-agaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaaatgtt 210  Q
    ||||||||||||| |||||||||||||| ||||||| ||| |||||||| || ||||||||||||||||||||| |||  |||||||||||| |||||||    
T  7763935 acttggtgtagttggatgcaagggaaaaagaaaagggagattggtggttgatggttaaagtggcatcatcatcaatttgaagtcaaggtgga-aaatgtt 7764033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 372 - 456
Target Start/End: Original strand, 47923534 - 47923618
Alignment:
Q  372 caggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaag 456  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||| |||||  |||  |||||||  |||||||||||||||    
T  47923534 caggataaggttggtcgtaccttgggttgtacgcatcaatcgtgtcacgatttggacaaacgtgacacgattttgacaactgaag 47923618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 491 - 562
Target Start/End: Original strand, 29682234 - 29682305
Alignment:
Q  491 gagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||| ||||||||||||||||||||||  ||| |||| |||| |||||||||||||||||||||||||||||    
T  29682234 gagaggaaaacttgggaaatcaaaggagttaaatttagggttaagggtctttgattagagttctcttgggtt 29682305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 491
Target Start/End: Complemental strand, 8127145 - 8126967
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatc 412  Q
    |||||||| |||||||||||| ||   ||||||||||||   | |||| || |||||| ||||||||||||||||||| |||||||||||  || ||| |    
T  8127145 caatcgtgtcacgattttgggaaagtgtgacacgattttcaacttgctaggtacgttttcaggataaggttggtcgtatcttgggtcgtacacaccaacc 8127046  T
Q  413 gtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttgaag 491  Q
    ||||||| |||||  |||  |||||||  ||||||||  ||||| ||   || ||| ||||| ||||||||||||||||    
T  8127045 gtgtcacgatttggacaaacgtgacacgattttgacagttgaagactgctatataagtgtttatttgcagattttgaag 8126967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 113 - 205
Target Start/End: Complemental strand, 9634985 - 9634892
Alignment:
Q  113 acttggtgtagttagatgcaagggaaaagaaaagg-agaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaa 205  Q
    ||||||||||||| | |||||| |||||||||||| ||| |||||||| || ||||||||| ||||||||||| |||  |||||||||||||||    
T  9634985 acttggtgtagttgggtgcaagtgaaaagaaaagggagattggtggttgatggttaaagtgacatcatcatcagtttgaagtcaaggtggagaa 9634892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 343 - 456
Target Start/End: Original strand, 24694767 - 24694880
Alignment:
Q  343 cacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatt 442  Q
    ||||||||||  | |||| | ||||||| ||||||||||||||||||||||||||| ||| ||| |||||||||||| |||||  |||  || ||||  |    
T  24694767 cacgatttttaacttgctggacacgttttcaggataaggttggtcgtaccttgggttgtacgcaccaatcgtgtcacgatttggacaaacgtaacacgat 24694866  T
Q  443 tttgacaactgaag 456  Q
    ||||||||||||||    
T  24694867 tttgacaactgaag 24694880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 497 - 558
Target Start/End: Complemental strand, 29196688 - 29196627
Alignment:
Q  497 aaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttg 558  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||| |||||    
T  29196688 aaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagggttttcttg 29196627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 290 - 425
Target Start/End: Original strand, 8370037 - 8370173
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcat-gcttggcacgtttacaggataaggttggtcg 388  Q
    ||||||||| ||| ||||||   |||||||| |||||||||||| || | ||||||||||||    || ||| || ||||||  ||||||||||||||||    
T  8370037 gtgagcatggtttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaaattgctgggaacgtttttaggataaggttggtcg 8370136  T
Q  389 taccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||||||||| ||| ||| |||||||||||| |||||    
T  8370137 taccttgggttgtacgcaccaatcgtgtcacgatttg 8370173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 290 - 425
Target Start/End: Complemental strand, 21711740 - 21711604
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttgg-catgcttggcacgtttacaggataaggttggtcg 388  Q
    ||||||||| ||||||||||   |||||||| |||||||||||| || | |||||| |||||    | ||||  | |||||| | |||||||||||||||    
T  21711740 gtgagcatggttttcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacaattttcaaacttgctgagtacgttttccggataaggttggtcg 21711641  T
Q  389 taccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||||||||||||| ||| |||||||||||| |||||    
T  21711640 taccttgggtcgtacgcaccaatcgtgtcacgatttg 21711604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 211
Target Start/End: Original strand, 37407941 - 37408040
Alignment:
Q  115 ttggtgtagttagatgcaagggaaaa-gaaaag--gagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaaatgttg 211  Q
    ||||||||||| |||||||||||||| ||||||  |||| || ||| | || ||||||||||||||||||||| |||  |||||||||||||||||||||    
T  37407941 ttggtgtagttggatgcaagggaaaaagaaaagaggagattgatggctgatggttaaagtggcatcatcatcaatttgaagtcaaggtggagaaatgttg 37408040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 37408341 - 37408405
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| | ||||||| |||| | |||||||||||||||||||||||||||    
T  37408341 aaacttgggaaatcaaaggaggcaactttagggtttatggtctttgattagagttctcttgggtt 37408405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 45095047 - 45095111
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||||||||||||| || | ||||||| |||| |||||||||||||||||||||||||||||    
T  45095047 aaacttgggaaatcaaaagaggcaactttagggtttagggtctttgattagagttctcttgggtt 45095111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 486 - 562
Target Start/End: Complemental strand, 53921801 - 53921725
Alignment:
Q  486 ttgaagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||  |||||||||||||||||| || ||||||||| ||||||| |||||||||||| ||| |||||||||    
T  53921801 ttgaagagagaaaaacttgggaaatcaaatgaggtaactttagggttgagagtctttgattagggttttcttgggtt 53921725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 2075667 - 2075572
Alignment:
Q  111 ctacttggtgtagttagatgcaagggaaaa-gaaaaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaa 205  Q
    |||||||||||||||||| ||||||||||| ||||||| |||||||| || ||   |||||| |||||| ||||| |||||||||||| |||||||    
T  2075667 ctacttggtgtagttagaagcaagggaaaatgaaaaggggaatggtgattgatgcctaaagtagcatcaccatcaatttagagtcaagatggagaa 2075572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 489 - 560
Target Start/End: Original strand, 32890976 - 32891047
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttggg 560  Q
    |||||| ||||| |||| || |||||||| ||||||||| |||||||||||||||||||| |||||||||||    
T  32890976 aagagaggaaaatttggaaagtcaaaggaggtaactttagggttgagggtctttgattagggttctcttggg 32891047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 40734911 - 40735005
Alignment:
Q  111 ctacttggtgtagttagatgcaagggaaaagaaaagga-gaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaa 205  Q
    ||||||||||||||| ||||||| ||||||||||| || || ||||| || || ||||||||||||||||||||| |||  |||||||||||||||    
T  40734911 ctacttggtgtagttggatgcaa-ggaaaagaaaaagaggattggtgattgatggttaaagtggcatcatcatcaatttgaagtcaaggtggagaa 40735005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 391
Target Start/End: Original strand, 36018330 - 36018408
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtac 391  Q
    ||||||||||||||||||||| || | |||||| ||||| ||| |||| |||||||||  |||||||||||||||||||    
T  36018330 caatcgtgacacgattttgggaaaacgtgacacaattttcggcttgctgggcacgtttttaggataaggttggtcgtac 36018408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 365 - 419
Target Start/End: Complemental strand, 36029556 - 36029502
Alignment:
Q  365 acgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcac 419  Q
    |||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  36029556 acgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcac 36029502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 205
Target Start/End: Complemental strand, 5258810 - 5258717
Alignment:
Q  113 acttggtgtagttagatgcaagggaaaagaaaagg-agaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaa 205  Q
    ||||||| |||||  || ||||||||||||||||| ||| |||||||| || ||||||||| ||||||||||| |||  |||||||||||||||    
T  5258810 acttggtatagttgaattcaagggaaaagaaaagggagattggtggttgatggttaaagtgacatcatcatcaatttgaagtcaaggtggagaa 5258717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 9636413 - 9636348
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagt-tctcttgggtt 562  Q
    |||||||||||||||||||| | ||||||| |||| |||||||||||||||||| |||||||||||    
T  9636413 aaacttgggaaatcaaaggaagaaactttagggtttagggtctttgattagagtctctcttgggtt 9636348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 300 - 456
Target Start/End: Original strand, 1735863 - 1736018
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtc 399  Q
    ||||||||||   |||||||| |||||||||||| || | ||||||||||||   | ||  || ||| |||  ||||||||||||||||||||||||||     
T  1735863 ttttcagggtgctcaatcgtg-cacgattttgggaaaacgtgacacgattttcaacttgaatgacacatttttaggataaggttggtcgtaccttgggtt 1735961  T
Q  400 gtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaag 456  Q
    ||| ||| |||||||||||| |||||  |||  |||||||  |||||||| ||||||    
T  1735962 gtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttgacagctgaag 1736018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 5258430 - 5258366
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||| |||||||||||  | ||||||| |||| |||||||||||||||||||||||||||||    
T  5258430 aaacttgagaaatcaaagggagaaactttagggtttagggtctttgattagagttctcttgggtt 5258366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 6718192 - 6718292
Alignment:
Q  113 acttggtgtagttagatgcaagggaaaagaaaag-gagaatggtggttcattgttaaagtggcatcatcatcattttag-agtcaaggtggagaaatgtt 210  Q
    |||||||  |||| |||||||||||||||||  | |||| |||||||| || |||||||||||||||||| ||  |||| ||||||||||||||||||||    
T  6718192 acttggtagagttggatgcaagggaaaagaatggtgagattggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgtt 6718291  T
Q  211 g 211  Q
    |    
T  6718292 g 6718292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 290 - 425
Target Start/End: Complemental strand, 16264887 - 16264751
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcat-gcttggcacgtttacaggataaggttggtcg 388  Q
    ||||||||| ||| ||||||   |||||||| |||||||||||| || | ||||||||||||     | ||| || |||||| |||||||||||||||||    
T  16264887 gtgagcatggtttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaactagctgggtacgttttcaggataaggttggtcg 16264788  T
Q  389 taccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||||||||| ||| ||| |||||||| ||| |||||    
T  16264787 taccttgggtggtacgcaccaatcgtgccacgatttg 16264751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 313 - 456
Target Start/End: Original strand, 39032126 - 39032269
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacgatttttgg-catgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaat 411  Q
    |||||||| |||||||||||| ||   ||||||||||||    | |||| || |||||| |||||||| |||||||||||||||||||||| ||| ||||    
T  39032126 caatcgtgtcacgattttgggaaaatgtgacacgattttcaaacttgctgggtacgttttcaggataaagttggtcgtaccttgggtcgtacgcaccaat 39032225  T
Q  412 cgtgtcacaatttgaccaattgtgacacatttttgacaactgaag 456  Q
    |||| ||| ||||||  ||| |||||||  |||||||| ||||||    
T  39032226 cgtgccacgatttga-aaatcgtgacacgattttgacagctgaag 39032269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 4386445 - 4386520
Alignment:
Q  151 atggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaaatgttgcaaagtgactcaaaa 226  Q
    ||||||||| || |||||| || |||||||| || |||||||||||||||||||||||||| | | ||||||||||    
T  4386445 atggtggttgatggttaaattgacatcatcaccaatttagagtcaaggtggagaaatgttgtatactgactcaaaa 4386520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 491
Target Start/End: Original strand, 25929026 - 25929145
Alignment:
Q  372 caggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatg 471  Q
    |||||||||||||||||||| |||| ||||| | | ||| ||||| || ||||| ||||| |||||||  |||||||| ||||||  ||  || ||| ||    
T  25929026 caggataaggttggtcgtacattggatcgtacgtaccaaccgtgttacgatttggccaatcgtgacacgattttgacagctgaagatttctatataagtg 25929125  T
Q  472 tttctttgcagattttgaag 491  Q
    |||||||| |||||||||||    
T  25929126 tttctttgtagattttgaag 25929145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 285 - 487
Target Start/End: Complemental strand, 23410840 - 23410639
Alignment:
Q  285 atgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttg 384  Q
    |||||| ||||||||||| |||||| |||||||||||||| |||||||  || | || ||| ||||||    ||||||  |||||| || |||||| |||    
T  23410840 atgtcgagagcatgttttgcagggtgtccaatcgtgacacaattttggaaaaacgtgtcacaatttttatgttgcttgatacgttttcaagataagtttg 23410741  T
Q  385 gtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagat 484  Q
    |||||||||||||| ||   || ||| |||||||| ||||| | ||  ||||||||  ||||||| |||||| ||   || ||| ||||||||||||| |    
T  23410740 gtcgtaccttgggttgttcacaccaaccgtgtcacgatttggcaaaacgtgacaca-atttgacagctgaagactgctatataagtgtttctttgcagtt 23410642  T
Q  485 ttt 487  Q
    |||    
T  23410641 ttt 23410639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 367 - 421
Target Start/End: Complemental strand, 27038502 - 27038448
Alignment:
Q  367 gtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaa 421  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||| |||||    
T  27038502 gttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgccacaa 27038448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 367 - 425
Target Start/End: Original strand, 37408199 - 37408257
Alignment:
Q  367 gtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||| ||||||||||||||||||||||||||||||| | |||||||||| ||| |||||    
T  37408199 gttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtggcacgatttg 37408257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 504 - 557
Target Start/End: Complemental strand, 9666748 - 9666695
Alignment:
Q  504 gggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctctt 557  Q
    ||||||||||| || ||||||||| |||||||||||||||||||| ||||||||    
T  9666748 gggaaatcaaatgaggtaactttagggttgagggtctttgattagggttctctt 9666695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 498 - 554
Target Start/End: Complemental strand, 2075355 - 2075300
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttct 554  Q
    ||||||||||||||||| || ||||||||| ||||||| ||||||||||||||||||    
T  2075355 aaacttgggaaatcaaatga-gtaactttagggttgagagtctttgattagagttct 2075300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 314 - 425
Target Start/End: Original strand, 33386247 - 33386359
Alignment:
Q  314 aatcgtgacacgattttgggcaatcatgacacgatttttgg-catgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatc 412  Q
    |||||||||||||||||| | |||| ||||||||||||    | |||| |  | |||| ||||||||||||||||||| ||||||||||| | |||||||    
T  33386247 aatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggtcgtatcttgggtcgtacgtatcaatc 33386346  T
Q  413 gtgtcacaatttg 425  Q
    ||| ||| |||||    
T  33386347 gtgacacgatttg 33386359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 416
Target Start/End: Original strand, 40735174 - 40735218
Alignment:
Q  372 caggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgt 416  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||    
T  40735174 caggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgt 40735218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 425
Target Start/End: Complemental strand, 40845108 - 40845056
Alignment:
Q  373 aggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||||||||||||||||||||||||| ||| ||| |||||||||||| |||||    
T  40845108 aggataaggttggtcgtaccttgggttgtacgcaccaatcgtgtcacgatttg 40845056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 425
Target Start/End: Original strand, 40912805 - 40912917
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatc 412  Q
    ||||||||| || |||||||| || | |||||||||||| ||| || | |||| |||| | |||||||| |||||||| ||||| ||||| ||| ||| |    
T  40912805 caatcgtgatacaattttgggaaaacgtgacacgattttcggcttgttgggcaagttttctggataaggctggtcgtatcttggatcgtacgcaccaaac 40912904  T
Q  413 gtgtcacaatttg 425  Q
    ||||||| |||||    
T  40912905 gtgtcacgatttg 40912917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 498 - 558
Target Start/End: Complemental strand, 44700778 - 44700718
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttg 558  Q
    ||||| |||||||||||||| ||||||||| |||||| ||||||||||||| ||| |||||    
T  44700778 aaactagggaaatcaaaggaggtaactttagggttgatggtctttgattagggttatcttg 44700718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 425
Target Start/End: Complemental strand, 48438678 - 48438618
Alignment:
Q  365 acgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||||| ||||||||||||||| ||||||||| ||||| ||| |||||||||||| |||||    
T  48438678 acgttttcaggataaggttggttgtaccttggatcgtacgcaccaatcgtgtcacgatttg 48438618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 424
Target Start/End: Complemental strand, 53921946 - 53921855
Alignment:
Q  335 aatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtat--gcatcaatcgtgtcacaattt 424  Q
    |||| |||||||||||||   ||| ||| || |||| |||||||||||||||||||||||| |||||||  |||||||||||| ||| ||||    
T  53921946 aatcgtgacacgatttttaatatgtttgacaagttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcgtgacacgattt 53921855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 372 - 415
Target Start/End: Complemental strand, 27027161 - 27027118
Alignment:
Q  372 caggataaggttggtcgtaccttgggtcgtatgcatcaatcgtg 415  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||    
T  27027161 caggataaggttggtcgtaccttgggtcgtacgcaccaatcgtg 27027118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 411
Target Start/End: Complemental strand, 5260785 - 5260707
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggtcgtatgcatcaat 411  Q
    ||||| |||||||||||||||| || | |||| | ||| |||||||||||||||||||| |||| ||||| ||||||||    
T  5260785 caatcgtgacacgatttttggcttgttgggcaagattttcaggataaggttggtcgtactttggatcgtacgcatcaat 5260707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 425
Target Start/End: Complemental strand, 37726135 - 37726077
Alignment:
Q  367 gtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||| |||||||||||||||||||| |||||||||| | |||||||||| ||| |||||    
T  37726135 gttttcaggataaggttggtcgtacattgggtcgtacgtatcaatcgtgacacgatttg 37726077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 800980 - 801045
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagag-ttctcttgggtt 562  Q
    |||||||||||||||||||| | |||| || |||| || |||||||||||||| ||||||||||||    
T  800980 aaacttgggaaatcaaaggaagaaactctagggtttagagtctttgattagagcttctcttgggtt 801045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 10057945 - 10058031
Alignment:
Q  122 agttagatgcaagggaaaagaaaaggagaatggtggttcattgttaaagtggcatcatcatcattttag-agtcaaggtggagaaatgttg 211  Q
    |||| ||||||||||||||| ||    || |||||||| || |||||||||||||||||| ||  |||| |||||||||||||||||||||    
T  10057945 agttggatgcaagggaaaaggaa----gattggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg 10058031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 10060167 - 10060253
Alignment:
Q  122 agttagatgcaagggaaaagaaaaggagaatggtggttcattgttaaagtggcatcatcatcattttag-agtcaaggtggagaaatgttg 211  Q
    |||| ||||||||||||||| ||    || |||||||| || |||||||||||||||||| ||  |||| |||||||||||||||||||||    
T  10060167 agttggatgcaagggaaaaggaa----gattggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg 10060253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 10062389 - 10062475
Alignment:
Q  122 agttagatgcaagggaaaagaaaaggagaatggtggttcattgttaaagtggcatcatcatcattttag-agtcaaggtggagaaatgttg 211  Q
    |||| ||||||||||||||| ||    || |||||||| || |||||||||||||||||| ||  |||| |||||||||||||||||||||    
T  10062389 agttggatgcaagggaaaaggaa----gattggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg 10062475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 10064611 - 10064697
Alignment:
Q  122 agttagatgcaagggaaaagaaaaggagaatggtggttcattgttaaagtggcatcatcatcattttag-agtcaaggtggagaaatgttg 211  Q
    |||| ||||||||||||||| ||    || |||||||| || |||||||||||||||||| ||  |||| |||||||||||||||||||||    
T  10064611 agttggatgcaagggaaaaggaa----gattggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg 10064697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 10066833 - 10066919
Alignment:
Q  122 agttagatgcaagggaaaagaaaaggagaatggtggttcattgttaaagtggcatcatcatcattttag-agtcaaggtggagaaatgttg 211  Q
    |||| ||||||||||||||| ||    || |||||||| || |||||||||||||||||| ||  |||| |||||||||||||||||||||    
T  10066833 agttggatgcaagggaaaaggaa----gattggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg 10066919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 23200423 - 23200358
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagag-ttctcttgggtt 562  Q
    |||||||||||||||||||  | |||| || |||| ||||||||||||||||| ||||||||||||    
T  23200423 aaacttgggaaatcaaagggagcaactctagggtttagggtctttgattagagtttctcttgggtt 23200358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 367 - 424
Target Start/End: Original strand, 27986102 - 27986159
Alignment:
Q  367 gtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaattt 424  Q
    |||| ||||||||||||||||||| ||||||||||| | |||||||||| ||| ||||    
T  27986102 gttttcaggataaggttggtcgtatcttgggtcgtacgtatcaatcgtgacacgattt 27986159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 372 - 425
Target Start/End: Original strand, 30709427 - 30709480
Alignment:
Q  372 caggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    ||||||||| |||||| |||||||||||||| ||| |||||||||||| |||||    
T  30709427 caggataagattggtcttaccttgggtcgtacgcaccaatcgtgtcacgatttg 30709480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 23198626 - 23198526
Alignment:
Q  113 acttggtgtagttagatgcaagggaaaagaaaagg-agaatggtggttcattgttaaagtggcatcatcatcattttaga-gtcaaggtggagaaatgtt 210  Q
    ||||||| |||||  |||||||||||||| ||||| ||| |||||||| || |||||| || ||||| || ||  ||||| |||||||||||||||||||    
T  23198626 acttggtatagttgaatgcaagggaaaagcaaagggagattggtggttgatggttaaattgacatcaccaacaaattagaagtcaaggtggagaaatgtt 23198527  T
Q  211 g 211  Q
    |    
T  23198526 g 23198526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 4599162 - 4599103
Alignment:
Q  153 ggtggttcattgttaaagtggcatcatcatcattttaga-gtcaaggtggagaaatgttg 211  Q
    ||||||| || |||||||||||||||||| ||  ||||| ||||||||||||||||||||    
T  4599162 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg 4599103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 10210923 - 10210982
Alignment:
Q  153 ggtggttcattgttaaagtggcatcatcatcattttag-agtcaaggtggagaaatgttg 211  Q
    ||||||| || |||||||||||||||||| ||  |||| |||||||||||||||||||||    
T  10210923 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg 10210982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 402
Target Start/End: Original strand, 16498752 - 16498838
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgta 402  Q
    ||||||||| ||||||||||| ||   || ||||||||| ||| |||||| |||||| |||   |||||||||||||||| |||||||||    
T  16498752 caatcgtgatacgattttgggaaaatgtgtcacgattttcggcttgcttgacacgttgaca---taaggttggtcgtaccgtgggtcgta 16498838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 425
Target Start/End: Complemental strand, 27453417 - 27453359
Alignment:
Q  367 gtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||| |||||||||||||||||||||||| | |||| | |||||||||| ||| |||||    
T  27453417 gttttcaggataaggttggtcgtaccttgtgacgtacgtatcaatcgtgacacgatttg 27453359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 43402661 - 43402588
Alignment:
Q  144 aaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaaatgttgcaaagtg 218  Q
    ||||||| |||||||| || ||||||||||||||||| ||| |||  || |||||||||| ||||||| ||||||    
T  43402661 aaggagattggtggttgatggttaaagtggcatcatcttcaatttgaaggcaaggtggag-aatgttgtaaagtg 43402588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 290 - 391
Target Start/End: Original strand, 51398488 - 51398590
Alignment:
Q  290 gtgagcatgttttt-cagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcg 388  Q
    ||||||||| |||| |||||| |||||| |||||||||||||||| || | |||||| ||||| ||  || | |||| ||||  |||||| |||||||||    
T  51398488 gtgagcatggttttgcagggtgtccaattgtgacacgattttgggaaaacgtgacacaattttcggtttgttgggcaagtttttaggatatggttggtcg 51398587  T
Q  389 tac 391  Q
    |||    
T  51398588 tac 51398590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 23198224 - 23198159
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagag-ttctcttgggtt 562  Q
    |||||||| ||||||||||  | |||| || |||| ||||||||||||||||| ||||||||||||    
T  23198224 aaacttggaaaatcaaagggagcaactctagggtttagggtctttgattagagtttctcttgggtt 23198159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 24694730 - 24694775
Alignment:
Q  285 atgtcgtgagcatgtttttcagggtttccaatcgtgacacgatttt 330  Q
    |||||||||||||||||| |||||| |||||||||  |||||||||    
T  24694730 atgtcgtgagcatgttttgcagggtgtccaatcgtatcacgatttt 24694775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 5373105 - 5373169
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||  ||||||||||| ||||||||| ||||||| ||||||| | |  |||||||||||||    
T  5373105 aaacttgaaaaatcaaaggaggtaactttaaggttgagagtctttggtgaaggttctcttgggtt 5373169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 500 - 562
Target Start/End: Original strand, 6716391 - 6716455
Alignment:
Q  500 acttgggaaatcaaaggacgtaactttatggttgaggg-tctttgattagagt-tctcttgggtt 562  Q
    |||||||||||||||||  |||||| || |||| |||| |||||||||||||| |||||||||||    
T  6716391 acttgggaaatcaaagggagtaactctagggtttagggttctttgattagagtatctcttgggtt 6716455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 500 - 562
Target Start/End: Original strand, 6718575 - 6718639
Alignment:
Q  500 acttgggaaatcaaaggacgtaactttatggttgaggg-tctttgattagagt-tctcttgggtt 562  Q
    |||||||||||||||||  |||||| || |||| |||| |||||||||||||| |||||||||||    
T  6718575 acttgggaaatcaaagggagtaactctagggtttagggttctttgattagagtatctcttgggtt 6718639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 375 - 415
Target Start/End: Original strand, 27974586 - 27974626
Alignment:
Q  375 gataaggttggtcgtaccttgggtcgtatgcatcaatcgtg 415  Q
    |||||||||||| ||||||||||||||| | ||||||||||    
T  27974586 gataaggttggttgtaccttgggtcgtacgtatcaatcgtg 27974626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 498 - 534
Target Start/End: Original strand, 44331437 - 44331473
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttga 534  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  44331437 aaacttgggaaatcaaaggaggtaactttagggttga 44331473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 251 - 562
Target Start/End: Complemental strand, 20959 - 20637
Alignment:
Q  251 tgacacgatttgtggaccatgacacaattttcctatgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgattt 350  Q
    |||||||||||||| | | || ||| ||||| | |||||||||||||||||| |||||| ||||||| ||||||||||||||| || | |||||||||||    
T  20959 tgacacgatttgtgaagcgtgtcacgattttgcaatgtcgtgagcatgttttgcagggtgtccaatcatgacacgattttgggaaaacgtgacacgattt 20860  T
Q  351 ttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaa 450  Q
    | ||| || | || | ||||  || ||||||||||||||||||||||||||| |||  || |||||||| ||||| | ||  || ||||  |||||| |     
T  20859 tcggcttgttgggaaagtttttagaataaggttggtcgtaccttgggtcgtacgcactaaacgtgtcacgatttggcaaaacgtaacacgattttgatag 20760  T
Q  451 ctgaagtctttaatgtaaatgtttctttgcagattttgaag-------agatga-----aaacttgggaaatcaaaggacgtaactttatggttgagggt 538  Q
    |||||  || | || ||| || |||||||||||||||||||       ||| ||     |||||| ||||||||||||| ||||||||| ||||||||||    
T  20759 ctgaaaactgttatataagtg-ttctttgcagattttgaaggagagctagaagagagagaaactttggaaatcaaaggaggtaactttagggttgagggt 20661  T
Q  539 ctttgattagagttctcttgggtt 562  Q
    |||||||||||||| |||||||||    
T  20660 ctttgattagagttatcttgggtt 20637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 3e-37; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 245 - 424
Target Start/End: Original strand, 3909715 - 3909893
Alignment:
Q  245 aaatcatgacacgatttgtggaccatgacacaattttcctatgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgaca 344  Q
    ||||| ||||||||||| || | |||| ||| ||||| | |||||||||||||||||| || ||| || ||||||||||||||||| || || |||||||    
T  3909715 aaatcgtgacacgatttttgaagcatgtcacgattttgcaatgtcgtgagcatgttttgcacggtgtcaaatcgtgacacgatttttggaaaacatgaca 3909814  T
Q  345 cgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaattt 424  Q
    | |||||||||||| |||||||||||  | ||||||||||||||||||||| |||||| ||||||| |||||||| ||||    
T  3909815 ctatttttggcatgtttggcacgttt-taagataaggttggtcgtaccttgagtcgtacgcatcaaccgtgtcacgattt 3909893  T

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Target: chr4; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 315 - 562
Target Start/End: Complemental strand, 34570894 - 34570636
Alignment:
Q  315 atcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgt 414  Q
    ||||||||||||||||||| || | |||||||||||| ||| |||| | || |||| ||||||||||||||| ||||||||||||||| ||| ||| |||    
T  34570894 atcgtgacacgattttgggaaaacgtgacacgattttcggcttgctggacaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgt 34570795  T
Q  415 gtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgt-ttctttgcagattttgaag------------agatgaaaac 501  Q
    ||||| |||||   ||  |||||||  |||||||| |||||| |  || | || |||| |||||||||||||||||||            |||   ||||    
T  34570794 gtcacgatttgggaaaacgtgacacgattttgacagctgaagac--tactatatatgtgttctttgcagattttgaaggagagctggaacagagagaaac 34570697  T
Q  502 ttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||    
T  34570696 ttgggaaatcaaaggaggtagctttagggttgagggtctttgattagagttctcttgggtt 34570636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 300 - 415
Target Start/End: Complemental strand, 52095856 - 52095740
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggt 398  Q
    |||||||||| ||||||||||||||||||||||| || | |||||||||||||||| |||| |||| | ||| |||||||||||||||||||||||||||    
T  52095856 ttttcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgggt 52095757  T
Q  399 cgtatgcatcaatcgtg 415  Q
    |||| ||||||||||||    
T  52095756 cgtaagcatcaatcgtg 52095740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 289 - 425
Target Start/End: Original strand, 6655400 - 6655536
Alignment:
Q  289 cgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcg 388  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||   |||||||||||| ||  |||| |||| |||| |||||||||||||||||    
T  6655400 cgtgagcatgttttgcagggtgtccaatcgtgacacgattttggggaaatgtgacacgattttcggtttgctgggcaagttttcaggataaggttggtcg 6655499  T
Q  389 taccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    ||| |||||||||| ||| ||| |||||||| |||||    
T  6655500 tacattgggtcgtacgcaccaaacgtgtcacgatttg 6655536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 300 - 491
Target Start/End: Original strand, 25861601 - 25861793
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaat-catgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggt 398  Q
    ||||||||||   |||||||| |||||||||||| ||  | ||||||||||||   | |||| |||| |||| |||||||||||||||||||||||||||    
T  25861601 ttttcagggtgctcaatcgtgtcacgattttgggaaaaacgtgacacgattttcaacttgctgggcatgttttcaggataaggttggtcgtaccttgggt 25861700  T
Q  399 cgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttgaag 491  Q
    |||| |||||||||||||||| |||||  |||  |||||||  ||||||||  ||||| |||  || ||| ||||||||||||||||||||||    
T  25861701 cgtacgcatcaatcgtgtcacgatttggacaaacgtgacacgattttgacagttgaagacttctatataagtgtttctttgcagattttgaag 25861793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 318 - 562
Target Start/End: Original strand, 24968801 - 24969057
Alignment:
Q  318 gtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtc 417  Q
    |||||||||||||| |||||| ||||||||| ||| ||||||||| ||||||| |||||||||||||||||||| |||||||||| || ||||||||| |    
T  24968801 gtgacacgattttgtgcaatcgtgacacgatatttagcatgcttgacacgttttcaggataaggttggtcgtacattgggtcgtacgcttcaatcgtgac 24968900  T
Q  418 acaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagatt------------ttgaagagatgaaaacttgg 505  Q
    |  ||||  ||||| |||||||  | ||||||  ||  |  |   || ||| ||||||| | ||||||            || ||||||  |||||||||    
T  24968901 atgattttgccaatcgtgacacgatattgacagttgttgggtactatttaagtgtttctgttcagattttttatgagaacttcaagagagaaaaacttgg 24969000  T
Q  506 gaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||    
T  24969001 gaaatcaaaggaggtaactttaaggttgacggtctttgattagagttctcttgggtt 24969057  T

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Target: chr4; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 312 - 562
Target Start/End: Original strand, 37740311 - 37740572
Alignment:
Q  312 ccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaat 411  Q
    |||||||| ||||||||||||| || | ||||| |||||| ||| |||  |||| |||| |||||||||||||||||||||||||||||||  || |||     
T  37740311 ccaatcgtaacacgattttgggaaaacgtgacatgattttcggcttgcagggcaagttttcaggataaggttggtcgtaccttgggtcgtacacaccaaa 37740410  T
Q  412 cgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttgaag---ag-atgaa--------a 499  Q
     ||||||| |||||   ||  |||||||  |||||||| |||||| ||   || ||| |||| |||||||||||||||||   || |||||        |    
T  37740411 tgtgtcacgatttgggaaaacgtgacacgattttgacagctgaagactgctatataagtgtt-ctttgcagattttgaaggagagcatgaagagagagaa 37740509  T
Q  500 acttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||    
T  37740510 acttgggaaatcaaaggaggtaagtttagggttgagggtctttgattagagttctcttgggtt 37740572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 300 - 425
Target Start/End: Original strand, 26363720 - 26363845
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtc 399  Q
    |||| ||||| ||||||||||||||||||||||| || | |||||||||||| ||| ||||  ||| |||| |||||||||||||||| |||||||||||    
T  26363720 tttttagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcggcttgctgagcaagttttcaggataaggttggtcataccttgggtc 26363819  T
Q  400 gtatgcatcaatcgtgtcacaatttg 425  Q
    ||| ||| ||| ||||||||||||||    
T  26363820 gtacgcaccaaacgtgtcacaatttg 26363845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 313 - 456
Target Start/End: Original strand, 36314812 - 36314955
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatc 412  Q
    |||||||| |||||||||||| || | ||||||||||||   | |||| ||||||||| ||||||||||||||||||||||||||||||| ||| |||||    
T  36314812 caatcgtgtcacgattttgggaaaacgtgacacgattttcaacttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatc 36314911  T
Q  413 gtgtcacaatttgaccaattgtgacacatttttgacaactgaag 456  Q
    ||||||| |||||  |||  |||||||  |||||||| ||||||    
T  36314912 gtgtcacgatttggacaaacgtgacacgattttgacagctgaag 36314955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 313 - 456
Target Start/End: Original strand, 36329021 - 36329164
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatc 412  Q
    |||||||| |||||||||||| || | ||||||||||||   | |||| ||||||||| ||||||||||||||||||||||||||||||| ||| |||||    
T  36329021 caatcgtgtcacgattttgggaaaacgtgacacgattttcaacttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatc 36329120  T
Q  413 gtgtcacaatttgaccaattgtgacacatttttgacaactgaag 456  Q
    ||||||| |||||  |||  |||||||  |||||||| ||||||    
T  36329121 gtgtcacgatttggacaaacgtgacacgattttgacagctgaag 36329164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 109 - 200
Target Start/End: Original strand, 54882320 - 54882411
Alignment:
Q  109 aactacttggtgtagttagatgcaagggaaaagaaaaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtg 200  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  54882320 aactacttggtgtagttggatgcaagggaaaggtaaaggagaatggtggttgatggttaaattagcatcatcatcattttagagtcaaggtg 54882411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 290 - 424
Target Start/End: Original strand, 54882485 - 54882619
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgt 389  Q
    ||||||||| ||| |||||| ||||||||||||||||||||||| || | |||||||||||| ||| || | | ||||||| ||||||||||||| ||||    
T  54882485 gtgagcatggtttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcggcttgttggacacgttttcaggataaggttgatcgt 54882584  T
Q  390 accttgggtcgtatgcatcaatcgtgtcacaattt 424  Q
    ||||||||||||| ||| |||  ||| ||||||||    
T  54882585 accttgggtcgtacgcaccaactgtgacacaattt 54882619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 290 - 425
Target Start/End: Complemental strand, 9927966 - 9927831
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgt 389  Q
    |||| |||||||| |||||| | ||||||||||||||||||||| ||   |||||||||||| ||| |||| | || |||| ||||||||||||||||||    
T  9927966 gtgaacatgttttgcagggtgttcaatcgtgacacgattttgggaaaatgtgacacgattttcggcttgctggacaagttttcaggataaggttggtcgt 9927867  T
Q  390 accttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
     |||||||||||| ||| ||| |||||||| |||||    
T  9927866 tccttgggtcgtacgcaccaaacgtgtcacgatttg 9927831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 304 - 424
Target Start/End: Complemental strand, 12745908 - 12745787
Alignment:
Q  304 cagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttac-aggataaggttggtcgtaccttgggtcgta 402  Q
    |||||| ||||||||||||| ||||||||| || | |||||||||||| ||| |||| |||| |||| | ||||||||||||||||||||||||||||||    
T  12745908 cagggtgtccaatcgtgacatgattttgggaaaacgtgacacgattttcggcttgctgggcaagttttccaggataaggttggtcgtaccttgggtcgta 12745809  T
Q  403 tgcatcaatcgtgtcacaattt 424  Q
     ||  |||||||||||| ||||    
T  12745808 cgcgccaatcgtgtcacgattt 12745787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 111 - 228
Target Start/End: Original strand, 29055866 - 29055983
Alignment:
Q  111 ctacttggtgtagttagatgcaagggaaaagaaaaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaaatgtt 210  Q
    |||| |||||||||| |||| |||| ||| ||||| | | | ||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  29055866 ctacatggtgtagttggatggaaggaaaatgaaaaagggtaaggtggttaattgttaaattggcatcaccatcattttagagtcaaggtggagaaatgtt 29055965  T
Q  211 gcaaagtgactcaaaaat 228  Q
    | ||  ||||||||||||    
T  29055966 gtaatttgactcaaaaat 29055983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 5429561 - 5429625
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  5429561 aaacttgggaaatcaaaggaagtaactttagggttgagggtctttgattagagttctcttgggtt 5429625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 313 - 425
Target Start/End: Complemental strand, 27417651 - 27417539
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatc 412  Q
    ||||||||||||||||||||| || | ||||||||||||   | || | |||||| || ||||||||||||||||||||||||||||||| ||||||| |    
T  27417651 caatcgtgacacgattttgggaaaacgtgacacgattttcaacttgttcggcacggtttcaggataaggttggtcgtaccttgggtcgtacgcatcaacc 27417552  T
Q  413 gtgtcacaatttg 425  Q
    ||||||| |||||    
T  27417551 gtgtcacgatttg 27417539  T

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Target: chr4; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 48142924 - 48142988
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  48142924 aaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggtt 48142988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 52082943 - 52082879
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  52082943 aaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggtt 52082879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 52093950 - 52093886
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  52093950 aaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggtt 52093886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 425
Target Start/End: Original strand, 40630450 - 40630564
Alignment:
Q  311 tccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaa 410  Q
    |||||||||| |||||||||||| || | ||||||||||||  || |||| ||||| ||| ||| |||||||||||||||||||||||| |||||| |||    
T  40630450 tccaatcgtgtcacgattttgggaaaacgtgacacgattttcagcttgctaggcacattttcagaataaggttggtcgtaccttgggtcatatgcaccaa 40630549  T
Q  411 tcgtgtcacaatttg 425  Q
     |||||||| |||||    
T  40630550 acgtgtcacgatttg 40630564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 334 - 562
Target Start/End: Complemental strand, 54200367 - 54200128
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattg 433  Q
    ||||| |||||||||||| ||| |||| |||| |||| || |||||||||||||||||||||||||||| ||| ||| |  ||||| |||||   || ||    
T  54200367 caatcgtgacacgattttcggcttgctgggcaagttttcaagataaggttggtcgtaccttgggtcgtacgcaccaaactagtcacgatttgggaaaatg 54200268  T
Q  434 tgacacatttttgacaactgaagtctttaatgtaaatgtttctttgcagattttgaaga---gatgaaa---------acttgggaaatcaaaggacgta 521  Q
    ||||||  |||||| | |||||| ||   || ||| |||| ||||| || |||||||||   | |||||         |||| ||||||||||||| |||    
T  54200267 tgacacgattttgatagctgaagactgctatataagtgtt-ctttgtagtttttgaagaagagctgaaagagagagaaacttaggaaatcaaaggaggta 54200169  T
Q  522 actttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  54200168 actttagggttgagggtctttgattagagttctcttgggtt 54200128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 246 - 419
Target Start/End: Original strand, 5429299 - 5429472
Alignment:
Q  246 aatcatgacacgatttgtggaccatgacacaattttcctatgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacac 345  Q
    |||||||||||||||||   | | || ||| ||||| | |||| | ||||||||||| |||||| || |||||||||||||||||||| || | ||| ||    
T  5429299 aatcatgacacgatttggtaagcgtgtcacgattttgcaatgttgagagcatgttttgcagggtgtctaatcgtgacacgattttgggaaaacgtgatac 5429398  T
Q  346 gatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcac 419  Q
    ||||||  || || | | || |||| |||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  5429399 gattttcagcttgttggacaagttttcaggttaagattggtcgtaccttgggtcgtacgcaccaatcgtgtcac 5429472  T

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Target: chr4; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 489 - 562
Target Start/End: Original strand, 5871693 - 5871766
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| |||||||||||||||||||||| ||||||||| ||||  ||||||||||||||||||||||||||||    
T  5871693 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttatgggtctttgattagagttctcttgggtt 5871766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 489 - 562
Target Start/End: Complemental strand, 13009726 - 13009653
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| ||||||||||||||||||| || ||||||||| |||| |||||||||||||||||||||||||||||    
T  13009726 aagagaggaaaacttgggaaatcaaatgaggtaactttagggttaagggtctttgattagagttctcttgggtt 13009653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 251 - 424
Target Start/End: Complemental strand, 46570287 - 46570115
Alignment:
Q  251 tgacacgatttgtggaccatgacacaattttcctatgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgattt 350  Q
    |||||||||||||| | | || ||| |||||   |||||| |||| |||| | ||||||  |||||||||||| ||||||||| || | |||||| ||||    
T  46570287 tgacacgatttgtgaagcgtgtcacgattttgaaatgtcgagagc-tgttctgcagggtgcccaatcgtgacaagattttgggaaaacgtgacacaattt 46570189  T
Q  351 ttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaattt 424  Q
    | ||| |||| ||||  ||| |||||||||||||||||||| |||||||||| ||||||| |||||||| ||||    
T  46570188 tcggcttgctgggcaaattttcaggataaggttggtcgtactttgggtcgtacgcatcaaacgtgtcacgattt 46570115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 489 - 562
Target Start/End: Complemental strand, 47038704 - 47038631
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| ||||||| ||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||    
T  47038704 aagagaagaaaactggggaaatcaaaggagttaactttagggttgagggtctttgattagagttctcttgggtt 47038631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 296 - 391
Target Start/End: Complemental strand, 5370575 - 5370479
Alignment:
Q  296 atgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtac 391  Q
    |||||||||||||  ||||||||||||||||||||||| |||| |||||||||||||||| |||| |||| |  || ||||||||||||||||||||    
T  5370575 atgtttttcagggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctgggcaagactttcaggataaggttggtcgtac 5370479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 9927743 - 9927679
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  9927743 aaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctcttgggtt 9927679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 12739836 - 12739772
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  12739836 aaacttgagaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggtt 12739772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 12748042 - 12747978
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  12748042 aaacttgagaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggtt 12747978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 313 - 425
Target Start/End: Original strand, 41639033 - 41639145
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatc 412  Q
    ||||||||||||||||||||  || | ||||||||||||   | || | ||||||||| ||||||||||||||||||||||||||||||| |||||||      
T  41639033 caatcgtgacacgattttggaaaaacgtgacacgattttcaacttgttgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcatcaact 41639132  T
Q  413 gtgtcacaatttg 425  Q
    ||||||| |||||    
T  41639133 gtgtcacgatttg 41639145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 52095648 - 52095584
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||    
T  52095648 aaacttgggaaatcaaaggaggtaactttagggttgagggactttgattagagttctcttgggtt 52095584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 56178922 - 56178858
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||    
T  56178922 aaacttgggaaatcaaaggaggtaactttagggttgaaggtctttgattagagttctcttgggtt 56178858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 34571091 - 34570996
Alignment:
Q  111 ctacttggtgtagttagatgcaagggaaaagaaaa-ggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaa 205  Q
    ||||||||||||||| ||||||||||||||||||| ||| | |||||||| || ||||||||||||||||||||| |||  ||| |||||||||||    
T  34571091 ctacttggtgtagttggatgcaagggaaaagaaaaaggaaattggtggttgatggttaaagtggcatcatcatcaatttgaagttaaggtggagaa 34570996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 311 - 425
Target Start/End: Complemental strand, 50674548 - 50674434
Alignment:
Q  311 tccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaa 410  Q
    ||||||||||  ||||||||||| || | ||||| ||||||  || |||| ||||||||| ||||||||||||||| ||||||||||||||| ||| |||    
T  50674548 tccaatcgtgttacgattttgggaaaacgtgacatgattttcagcttgctgggcacgttttcaggataaggttggttgtaccttgggtcgtacgcaccaa 50674449  T
Q  411 tcgtgtcacaatttg 425  Q
     |||||||| |||||    
T  50674448 acgtgtcacgatttg 50674434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 298 - 425
Target Start/End: Original strand, 5268766 - 5268894
Alignment:
Q  298 gtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttgg-catgcttggcacgtttacaggataaggttggtcgtaccttgg 396  Q
    ||||||||||||   |||||||| |||||||||||| || | ||||||||||||    | || | || |||||| |||||||||||||||||||||||||    
T  5268766 gtttttcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgg 5268865  T
Q  397 gtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||||| ||| |||||||||||| |||||    
T  5268866 gtcgtacgcaccaatcgtgtcacgatttg 5268894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 297 - 425
Target Start/End: Original strand, 6742981 - 6743109
Alignment:
Q  297 tgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgg 396  Q
    |||||||||||||  | ||||||| |||| ||||||| || | ||||||||||||   | || | ||||||||| |||||||||||||||||||||||||    
T  6742981 tgtttttcagggtgcctaatcgtggcacgtttttgggaaaacgtgacacgattttaaacttgttgggcacgttttcaggataaggttggtcgtaccttgg 6743080  T
Q  397 gtcgtatgcatcaatcgtgtcacaatttg 425  Q
    | |||| |||  ||||||||||| |||||    
T  6743081 gacgtacgcactaatcgtgtcacgatttg 6743109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 314 - 425
Target Start/End: Original strand, 8689079 - 8689191
Alignment:
Q  314 aatcgtgacacgattttgggcaatcatgacacgatttttgg-catgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatc 412  Q
    |||||||||||||||||||| || | ||||||||||||    | |||| || |||||| ||||||||||||||||||||||||||||||| ||| |||||    
T  8689079 aatcgtgacacgattttgggaaaacgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatc 8689178  T
Q  413 gtgtcacaatttg 425  Q
    ||| ||| |||||    
T  8689179 gtgccacgatttg 8689191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 293 - 369
Target Start/End: Complemental strand, 18377874 - 18377798
Alignment:
Q  293 agcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtt 369  Q
    |||||||||||| |||| | |||| |||||||||||| | |||||||||||||||||||||||||||||| ||||||    
T  18377874 agcatgtttttctgggtgttcaattgtgacacgatttcgagcaatcatgacacgatttttggcatgcttgacacgtt 18377798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 313 - 456
Target Start/End: Complemental strand, 54867694 - 54867551
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatc 412  Q
    |||||||| ||| |||||||| || | ||||||||||||   | |||| |||||||||   ||||||||||||||||||||||| ||||| ||| |||||    
T  54867694 caatcgtgtcacaattttgggaaaacgtgacacgattttcaacttgctgggcacgtttttcggataaggttggtcgtaccttggatcgtacgcaccaatc 54867595  T
Q  413 gtgtcacaatttgaccaattgtgacacatttttgacaactgaag 456  Q
    ||||||| |||||  |||  |||||||  |||||||| ||||||    
T  54867594 gtgtcacgatttggacaaacgtgacacgattttgacagctgaag 54867551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 246 - 391
Target Start/End: Original strand, 2209122 - 2209266
Alignment:
Q  246 aatcatgacacgatttgtggaccatgacacaattttcctatgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacac 345  Q
    |||| ||||||||||| || | | || ||| ||||| | |||||| |||| |||||| ||| ||  |||||||||||||||||||||| || | ||||||    
T  2209122 aatcgtgacacgatttttgaagcgtgtcacgattttgcaatgtcgagagc-tgttttgcagagtgcccaatcgtgacacgattttggggaaacgtgacac 2209220  T
Q  346 gatttttggcatgcttggcacgtttacaggataaggttggtcgtac 391  Q
    |||||| ||  |||| |||| |||| ||||||||||||||||||||    
T  2209221 gattttcggtttgctaggcaagttttcaggataaggttggtcgtac 2209266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 497 - 558
Target Start/End: Complemental strand, 46147642 - 46147581
Alignment:
Q  497 aaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttg 558  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||| |||||    
T  46147642 aaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagggttttcttg 46147581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 365 - 425
Target Start/End: Complemental strand, 5148140 - 5148080
Alignment:
Q  365 acgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||||| ||||||||||||||||||||||||||||||| ||| |||||||||||| |||||    
T  5148140 acgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttg 5148080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 26175922 - 26175858
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| |||||||||  |||||||||||||||||| |||||| |||||||    
T  26175922 aaacttgggaaatcaaaggaggtaactttagagttgagggtctttgattaaagttctgttgggtt 26175858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 29254376 - 29254440
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||||||||||||||||  |||||||| |||||| ||||||||| |||||||||||||||||    
T  29254376 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgagtagagttctcttgggtt 29254440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 30000091 - 30000027
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||||||||||||||||   ||||||| |||| |||||||||||||||||||||||||||||    
T  30000091 aaacttgggaaatcaaaggagacaactttagggtttagggtctttgattagagttctcttgggtt 30000027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 425
Target Start/End: Original strand, 36994219 - 36994358
Alignment:
Q  285 atgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttg 384  Q
    |||||||||||||||||| | | || |||||||||||||| ||||| || || | || ||| ||||| ||| |||| ||||||||| |  ||||||||||    
T  36994219 atgtcgtgagcatgtttt-ctgagtgtccaatcgtgacacaatttttggaaaacgtgtcacaattttcggcttgctaggcacgttttctagataaggttg 36994317  T
Q  385 gtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
     ||||||||| ||||||| ||| ||| |||||||| |||||    
T  36994318 atcgtaccttaggtcgtacgcaccaaccgtgtcacgatttg 36994358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 558
Target Start/End: Original strand, 36994407 - 36994466
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttg 558  Q
    |||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  36994407 aaacttggaaaatcaaaggaggtaacttt-tggttgagggtctttgattagagttctcttg 36994466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 558
Target Start/End: Complemental strand, 45687482 - 45687422
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttg 558  Q
    ||||| |||||||||||||| ||||||||| |||||||||||||||||||| |||||||||    
T  45687482 aaactagggaaatcaaaggaggtaactttagggttgagggtctttgattagggttctcttg 45687422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 334 - 425
Target Start/End: Complemental strand, 52083119 - 52083027
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    ||||| |||||||||||||||| || | |||| | ||| |||||||||||||||| |||||||||||||| |||||||||||| ||| |||||    
T  52083119 caatcgtgacacgatttttggcttgttgggcaagattttcaggataaggttggtcataccttgggtcgtaagcatcaatcgtgacacgatttg 52083027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 334 - 425
Target Start/End: Complemental strand, 52094126 - 52094034
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    ||||| |||||||||||||||| || | |||| | ||| |||||||||||||||| |||||||||||||| |||||||||||| ||| |||||    
T  52094126 caatcgtgacacgatttttggcttgttgggcaagattttcaggataaggttggtcataccttgggtcgtaagcatcaatcgtgacacgatttg 52094034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 391
Target Start/End: Complemental strand, 56179120 - 56179028
Alignment:
Q  300 ttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtac 391  Q
    |||||||||  ||||||||||||||||||||||| || | ||||| |||||||||| |||| |||| | ||| ||||||||||||||||||||    
T  56179120 ttttcagggcgtccaatcgtgacacgattttgggaaaacgtgacatgatttttggcttgctgggcaagattttcaggataaggttggtcgtac 56179028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 498 - 559
Target Start/End: Complemental strand, 12745722 - 12745661
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgg 559  Q
    ||||||||||||  |||||| |||||||||  ||||||||||||||||||||||||||||||    
T  12745722 aaacttgggaaaaaaaaggaggtaactttagagttgagggtctttgattagagttctcttgg 12745661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 372 - 425
Target Start/End: Original strand, 16622935 - 16622988
Alignment:
Q  372 caggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||| |||||    
T  16622935 caggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttg 16622988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 391
Target Start/End: Complemental strand, 26176172 - 26176028
Alignment:
Q  246 aatcatgacacgatttgtggaccatgacacaattttcctatgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacac 345  Q
    |||| |||||| ||||||| | | || ||| ||||| | |||||| |||| |||||| ||||||  |||| |||||||| |||||||| || | ||||||    
T  26176172 aatcgtgacacaatttgtgaagcgtgtcacgattttgcaatgtcgagagc-tgttttgcagggtgcccaaccgtgacacaattttgggaaaacgtgacac 26176074  T
Q  346 gatttttggcatgcttggcacgtttacaggataaggttggtcgtac 391  Q
    |||||| ||| || | |||| |||| ||||||||||||||||||||    
T  26176073 gattttcggcttgatgggcaagttttcaggataaggttggtcgtac 26176028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 311 - 391
Target Start/End: Original strand, 35661905 - 35661985
Alignment:
Q  311 tccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtac 391  Q
    ||||||||||||||||||||||| ||   || ||||||||| ||| || | ||||||||| ||||||||||||||||||||    
T  35661905 tccaatcgtgacacgattttgggaaaatgtgtcacgattttcggcttgttgggcacgttttcaggataaggttggtcgtac 35661985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 52467641 - 52467577
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||| ||| |||||||||| |||| |||| |||||||||||||||||||| |||||||||||||    
T  52467641 aaactagggtaatcaaaggaggtaattttagggttgagggtctttgattagggttctcttgggtt 52467577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 12740222 - 12740129
Alignment:
Q  111 ctacttggtgtagttagatgcaagggaaaagaaaaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaa 205  Q
    ||||||||||||||| ||||||||| ||||||||||| || |  ||||| || | |||||||||||||| |||| |||  |||||||||||||||    
T  12740222 ctacttggtgtagttggatgcaagg-aaaagaaaaggggattactggttgatggctaaagtggcatcattatcaatttgaagtcaaggtggagaa 12740129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 12748428 - 12748335
Alignment:
Q  111 ctacttggtgtagttagatgcaagggaaaagaaaaggagaatggtggttcattgttaaagtggcatcatcatcattttagagtcaaggtggagaa 205  Q
    ||||||||||||||| ||||||||| ||||||||||| || |  ||||| || | |||||||||||||| |||| |||  |||||||||||||||    
T  12748428 ctacttggtgtagttggatgcaagg-aaaagaaaaggggattactggttgatggctaaagtggcatcattatcaatttgaagtcaaggtggagaa 12748335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 375 - 425
Target Start/End: Original strand, 16628517 - 16628567
Alignment:
Q  375 gataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||||||||||||||||||||||||||| ||| |||||||||||| |||||    
T  16628517 gataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttg 16628567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 374 - 424
Target Start/End: Original strand, 39773981 - 39774031
Alignment:
Q  374 ggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaattt 424  Q
    |||||||||||||||||||||||||| || |||||||||||| ||||||||    
T  39773981 ggataaggttggtcgtaccttgggtcatacgcatcaatcgtgacacaattt 39774031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 497 - 562
Target Start/End: Original strand, 3909988 - 3910053
Alignment:
Q  497 aaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||| |||||||||||||| ||||||| | |||| |||| ||||||||||||||||||| ||||    
T  3909988 aaaactagggaaatcaaaggaggtaacttaagggtttagggcctttgattagagttctcttaggtt 3910053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 13992572 - 13992507
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagt-tctcttgggtt 562  Q
    |||||||||||||||||||  | ||||||| |||| |||||||||||||||||| |||||||||||    
T  13992572 aaacttgggaaatcaaaggtagcaactttagggtttagggtctttgattagagtctctcttgggtt 13992507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 374 - 455
Target Start/End: Original strand, 38152081 - 38152162
Alignment:
Q  374 ggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaa 455  Q
    ||||||||||||||||||||||| ||||| ||||||||||| | ||| |||||  || ||||||||  |||||||| |||||    
T  38152081 ggataaggttggtcgtaccttggatcgtacgcatcaatcgttttacattttgaaaaaatgtgacacgattttgacagctgaa 38152162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 292 - 415
Target Start/End: Complemental strand, 3778085 - 3777961
Alignment:
Q  292 gagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcat-gcttggcacgtttacaggataaggttggtcgta 390  Q
    ||||||| ||| ||||||   |||||||| |||||||||||| || | ||||||||||||     | ||| || |||||| || ||||||||||||||||    
T  3778085 gagcatggtttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaatttgctcggtacgttttcaagataaggttggtcgta 3777986  T
Q  391 ccttgggtcgtatgcatcaatcgtg 415  Q
    |||||||||||| ||| ||||||||    
T  3777985 ccttgggtcgtacgcaccaatcgtg 3777961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 498 - 558
Target Start/End: Complemental strand, 37230022 - 37229962
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttg 558  Q
    ||||||| |||||||||||| ||||||||| |||| ||||||||||||||| ||| |||||    
T  37230022 aaacttgagaaatcaaaggaggtaactttagggtttagggtctttgattagggttatcttg 37229962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 391
Target Start/End: Complemental strand, 12740037 - 12739942
Alignment:
Q  297 tgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtac 391  Q
    |||||| |||||| ||||| || |||||||||||||| || | | |||| ||||||||| |||| |||| | ||| ||||||||||||||||||||    
T  12740037 tgttttgcagggtgtccaaccgcgacacgattttgggaaaacgtaacacaatttttggcttgctgggcaagtttttcaggataaggttggtcgtac 12739942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 391
Target Start/End: Complemental strand, 12748243 - 12748148
Alignment:
Q  297 tgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtac 391  Q
    |||||| |||||| ||||| || |||||||||||||| || | | |||| ||||||||| |||| |||| | ||| ||||||||||||||||||||    
T  12748243 tgttttgcagggtgtccaaccgcgacacgattttgggaaaacgtaacacaatttttggcttgctgggcaagtttttcaggataaggttggtcgtac 12748148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 498 - 560
Target Start/End: Complemental strand, 5370372 - 5370310
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttggg 560  Q
    ||||||| ||||||||||||   ||||||| |||| |||||||||||||| ||||||||||||    
T  5370372 aaacttgagaaatcaaaggagacaactttagggtttagggtctttgattatagttctcttggg 5370310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 497 - 547
Target Start/End: Complemental strand, 36463689 - 36463639
Alignment:
Q  497 aaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgatta 547  Q
    |||||||||||||||| |||| ||||||||| | |||||||||||||||||    
T  36463689 aaaacttgggaaatcataggaggtaactttaggattgagggtctttgatta 36463639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 367 - 424
Target Start/End: Original strand, 5396327 - 5396384
Alignment:
Q  367 gtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaattt 424  Q
    |||| ||||||||||||| ||||||||||||||||| ||| |||||||| ||| ||||    
T  5396327 gttttcaggataaggttgatcgtaccttgggtcgtacgcaccaatcgtgccacgattt 5396384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 36770966 - 36771031
Alignment:
Q  164 gttaaagtggcatcatcatcattttagagtcaaggtggagaaatgttgcaaagtgactcaaaaatg 229  Q
    |||||| | |||||||||  ||||||||||||||||| |||| ||||  |||||||||||||||||    
T  36770966 gttaaatttgcatcatcactattttagagtcaaggtgaagaattgttaaaaagtgactcaaaaatg 36771031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 211
Target Start/End: Original strand, 5137819 - 5137879
Alignment:
Q  152 tggtggttcattgttaaagtggcatcatcatcattttag-agtcaaggtggagaaatgttg 211  Q
    |||||||| || |||||||||||||||||| ||  |||| |||||||||||||||||||||    
T  5137819 tggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg 5137879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 425
Target Start/End: Complemental strand, 5143723 - 5143663
Alignment:
Q  365 acgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||||| ||||||||||||||||| ||||||||| ||  ||| |||||||||||| |||||    
T  5143723 acgttttcaggataaggttggtcgcaccttgggttgtgcgcaccaatcgtgtcacgatttg 5143663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 7124434 - 7124493
Alignment:
Q  153 ggtggttcattgttaaagtggcatcatcatcattttag-agtcaaggtggagaaatgttg 211  Q
    ||||||| || |||||||||||||||||| ||  |||| |||||||||||||||||||||    
T  7124434 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg 7124493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 8395136 - 8395195
Alignment:
Q  153 ggtggttcattgttaaagtggcatcatcatcattttag-agtcaaggtggagaaatgttg 211  Q
    ||||||| || |||||||||||||||||| ||  |||| |||||||||||||||||||||    
T  8395136 ggtggttgatggttaaagtggcatcatcaccaaattagaagtcaaggtggagaaatgttg 8395195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 501 - 543
Target Start/End: Original strand, 6375960 - 6376002
Alignment:
Q  501 cttgggaaatcaaaggacgtaactttatggttgagggtctttg 543  Q
    ||||||||||||||||| |||| |||| |||||||||||||||    
T  6375960 cttgggaaatcaaaggaggtaattttagggttgagggtctttg 6376002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 285 - 351
Target Start/End: Complemental strand, 13992797 - 13992732
Alignment:
Q  285 atgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttt 351  Q
    ||||||||||| || ||| ||||||  | |||||||||||||||||||| |||| ||||||||||||    
T  13992797 atgtcgtgagc-tggtttgcagggtgccaaatcgtgacacgattttgggaaatcgtgacacgatttt 13992732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 395
Target Start/End: Complemental strand, 30000935 - 30000873
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttg 395  Q
    ||||| |||||||||||||||| |||| |||| | |||  |||||||||||||||||||||||    
T  30000935 caatcgtgacacgatttttggcttgctgggcaagatttttaggataaggttggtcgtaccttg 30000873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 512 - 558
Target Start/End: Complemental strand, 48142651 - 48142605
Alignment:
Q  512 aaaggacgtaactttatggttgagggtctttgattagagttctcttg 558  Q
    |||||| ||||||||| |||||| ||||||||||||| |||||||||    
T  48142651 aaaggaggtaactttagggttgatggtctttgattagggttctcttg 48142605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 314 - 391
Target Start/End: Complemental strand, 55086032 - 55085955
Alignment:
Q  314 aatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggat-aaggttggtcgtac 391  Q
    |||| ||||||||||| ||| || | || ||||||||| ||||||||||||||| || |||||| ||||||||||||||    
T  55086032 aatcatgacacgattt-gggaaaacgtggcacgattttgggcatgcttggcacgctttcaggataaaggttggtcgtac 55085955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 31495596 - 31495531
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagag-ttctcttgggtt 562  Q
    |||||||||||||||||||  |||||| || |||| |  |||||||||||||| ||||||||||||    
T  31495596 aaacttgggaaatcaaagggagtaactctagggtttatagtctttgattagagcttctcttgggtt 31495531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 21704114 - 21704050
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||| ||||||||| || ||||||||| ||||||  ||||||| | || |||||||||||||    
T  21704114 aaacttgagaaatcaaatgaggtaactttaaggttgaaagtctttggtgagggttctcttgggtt 21704050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 290 - 425
Target Start/End: Complemental strand, 81006 - 80871
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgt 389  Q
    ||||||||  |||||||||| ||||||||||||||||||||||| || | || ||||||||| ||| |||| |||| |||| ||||||||||||||||||    
T  81006 gtgagcattgttttcagggtatccaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgggcaagttttcaggataaggttggtcgt 80907  T
Q  390 accttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    ||||||||||||| ||| ||| |||||||| |||||    
T  80906 accttgggtcgtacgcaccaaacgtgtcacgatttg 80871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 289 - 425
Target Start/End: Original strand, 11002 - 11138
Alignment:
Q  289 cgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcg 388  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||   |||||||||||| ||  |||| |||| |||| |||||||||||||||||    
T  11002 cgtgagcatgttttgcagggtgtccaatcgtgacacgattttggggaaatgtgacacgattttcggtttgctgggcaagttttcaggataaggttggtcg 11101  T
Q  389 taccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    ||| |||||||||| ||| ||| |||||||| |||||    
T  11102 tacattgggtcgtacgcaccaaacgtgtcacgatttg 11138  T

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Target: scaffold0286; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 498 - 552
Target Start/End: Original strand, 22226 - 22280
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagtt 552  Q
    |||||||||||||||||||  | |||| || |||| |||||||||||||||||||    
T  22226 aaacttgggaaatcaaagggagcaactctagggtttagggtctttgattagagtt 22280  T

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Target: scaffold0176 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 278 - 424
Target Start/End: Complemental strand, 17781 - 17635
Alignment:
Q  278 ttttcctatgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggat 377  Q
    |||||| |||||| ||||||||||| |||||| ||||| ||||||||||||||||| || | |||||||||||||||| |||| |||| | || || |||    
T  17781 ttttccaatgtcgagagcatgttttgcagggtgtccaaccgtgacacgattttgggaaaacgtgacacgatttttggcttgctgggcaagctttcatgat 17682  T
Q  378 aaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaattt 424  Q
    ||||||||||||||| || |||||| ||| ||| |||||||| ||||    
T  17681 aaggttggtcgtaccctgagtcgtacgcaccaaacgtgtcacgattt 17635  T

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Target: scaffold0006 (Bit Score: 55; Significance: 2e-22; HSPs: 5)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 365 - 491
Target Start/End: Complemental strand, 6148 - 6022
Alignment:
Q  365 acgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttgaccaattgtgacacatttttgacaactgaagtctttaat 464  Q
    |||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||  |||  |||||||  |||||||| |||||| ||   ||    
T  6148 acgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacaatttggacaaacgtgacacgattttgacagctgaagactgctat 6049  T
Q  465 gtaaatgtttctttgcagattttgaag 491  Q
     ||||||||  | ||||||||||||||    
T  6048 ataaatgttcttgtgcagattttgaag 6022  T

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Target: scaffold0006; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 489 - 562
Target Start/End: Complemental strand, 149392 - 149319
Alignment:
Q  489 aagagatgaaaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    ||||||||| ||||||||||||||||||| |||||||   ||||||||||||||||||||||||||||| ||||    
T  149392 aagagatgacaacttgggaaatcaaaggaggtaacttgtgggttgagggtctttgattagagttctcttaggtt 149319  T

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Target: scaffold0006; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 425
Target Start/End: Complemental strand, 2954 - 2896
Alignment:
Q  367 gtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||| |||||    
T  2954 gttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttg 2896  T

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Target: scaffold0006; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 367 - 425
Target Start/End: Original strand, 132916 - 132974
Alignment:
Q  367 gtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||| ||||||||||||||||||||||||||||||| | |||||||||| ||| |||||    
T  132916 gttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtgacacgatttg 132974  T

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Target: scaffold0006; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 402
Target Start/End: Complemental strand, 149543 - 149457
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgta 402  Q
    ||||||||| ||||||||||| ||   || ||||||||| ||| |||||| |||||| |||   |||||||||||||||| |||||||||    
T  149543 caatcgtgatacgattttgggaaaatgtgtcacgattttcggcttgcttgacacgttgaca---taaggttggtcgtaccgtgggtcgta 149457  T

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Target: scaffold0002 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 434217 - 434321
Alignment:
Q  313 caatcgtgacacgattttgggcaatcatgacacga-tttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggtcgtatgcatcaa 410  Q
    ||||||||||||||||||||| |||| |||||||| |||||||| |||| |||| | ||| ||||||||||||||||||||||||| ||||| |||| ||    
T  434217 caatcgtgacacgattttgggaaatcgtgacacgattttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcataaa 434316  T
Q  411 tcgtg 415  Q
    |||||    
T  434317 tcgtg 434321  T

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Target: scaffold0002; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 434415 - 434479
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||| | ||||||| |||| |||||||||||||||||||||||||||||    
T  434415 aaacttgggaaatcaaaggaagcaactttagggtttagggtctttgattagagttctcttgggtt 434479  T

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Target: scaffold1519 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 799 - 863
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttgggtt 562  Q
    |||||||||||||||||||  | ||||||| |||| |||||||||||||||||||||||||||||    
T  799 aaacttgggaaatcaaaggcagcaactttagggtttagggtctttgattagagttctcttgggtt 863  T

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Target: scaffold0016 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 558
Target Start/End: Original strand, 114472 - 114532
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagagttctcttg 558  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||||||||| |||||||||    
T  114472 aaacttgagaaatcaaaggaggtaactttagggttgagggtctttgattagggttctcttg 114532  T

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Target: scaffold0016; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 415
Target Start/End: Original strand, 114270 - 114374
Alignment:
Q  311 tccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacg-tttacaggataaggttggtcgtaccttgggtcgtatgcatca 409  Q
    ||||||| ||||||||| ||||| || | |||||||||||| ||| |||| ||||   ||| ||||||||||||||| ||||||||||||||| ||||||    
T  114270 tccaatcatgacacgatattgggaaaacgtgacacgatttt-ggcttgctgggcaaaattttcaggataaggttggtggtaccttgggtcgtacgcatca 114368  T
Q  410 atcgtg 415  Q
     |||||    
T  114369 ctcgtg 114374  T

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Target: scaffold0087 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 425
Target Start/End: Original strand, 43598 - 43656
Alignment:
Q  367 gtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  43598 gttttcaggataaggttggtcgtaccttgggtcgtatgtatcaatcgtggcacgatttg 43656  T

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Target: scaffold0087; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 425
Target Start/End: Original strand, 36387 - 36527
Alignment:
Q  285 atgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttgg-catgcttggcacgtttacaggataaggtt 383  Q
    ||||||||||| || ||| |||||| || ||||||| |||||||||| | || | |||||| |||||    | |||| || |||||| ||||||||||||    
T  36387 atgtcgtgagc-tggtttgcagggtgtcaaatcgtggcacgattttgtgaaaacgtgacacaattttcaaacttgctgggtacgttttcaggataaggtt 36485  T
Q  384 ggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    ||||||||||||||||||| ||| ||||| || ||| |||||    
T  36486 ggtcgtaccttgggtcgtacgcaccaatcatggcacgatttg 36527  T

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Target: scaffold0491 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 3)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 9404 - 9304
Alignment:
Q  113 acttggtgtagttagatgcaagggaaaagaaaa-ggagaatggtggttcattgttaaagtggcatcatcatcattttag-agtcaaggtggagaaatgtt 210  Q
    ||||||| |||||  |||||||||||||||||| || || |||||||| || ||||||||| ||||| |||||  |||| ||||||||||||||||||||    
T  9404 acttggtatagttgaatgcaagggaaaagaaaagggggattggtggttgatggttaaagtgacatcaccatcaaattagaagtcaaggtggagaaatgtt 9305  T
Q  211 g 211  Q
    |    
T  9304 g 9304  T

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Target: scaffold0491; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 9022 - 8957
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagag-ttctcttgggtt 562  Q
    |||||||||||||||||||  |||||| || | || ||||||||||||||||| ||||||||||||    
T  9022 aaacttgggaaatcaaagggagtaactctaggctttagggtctttgattagagcttctcttgggtt 8957  T

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Target: scaffold0491; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 11448 - 11383
Alignment:
Q  498 aaacttgggaaatcaaaggacgtaactttatggttgagggtctttgattagag-ttctcttgggtt 562  Q
    |||||||||||||||||||  |||||| || |||| | ||||||||||||||| ||||||||||||    
T  11448 aaacttgggaaatcaaagggagtaactctagggtttatggtctttgattagagcttctcttgggtt 11383  T

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Target: scaffold0140 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 426
Target Start/End: Original strand, 8054 - 8113
Alignment:
Q  367 gtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttga 426  Q
    |||| ||||||||||||||||||||||||||||||| | |||||||||| ||| ||||||    
T  8054 gttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtgacacgatttga 8113  T

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Target: scaffold0098 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 425
Target Start/End: Complemental strand, 45756 - 45601
Alignment:
Q  270 tgacacaattttcctatgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttgg-catgcttggcacgt 368  Q
    ||||||||||||   ||||||||||| || ||| |||||| || ||||||| ||||||| || | |||| ||||||||||||    | |||| |  | ||    
T  45756 tgacacaattttgtaatgtcgtgagc-tgatttgcagggtgtcaaatcgtggcacgattctgtgaaatcgtgacacgattttcaaacttgctggctaagt 45658  T
Q  369 ttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    || |||||||||||||||||||||||||||||||   |||||||||| ||| |||||    
T  45657 tttcaggataaggttggtcgtaccttgggtcgtacatatcaatcgtgacacgatttg 45601  T

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Target: scaffold0466 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 334 - 425
Target Start/End: Original strand, 6816 - 6907
Alignment:
Q  334 caatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacaatttg 425  Q
    ||||| ||||||||||||   | |||| || |||||| ||||||||||||||| ||||||||||||||| ||| ||| | |||||| |||||    
T  6816 caatcgtgacacgattttcaacttgctaggaacgttttcaggataaggttggttgtaccttgggtcgtacgcaccaaccatgtcacgatttg 6907  T

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Target: scaffold0466; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 290 - 330
Target Start/End: Original strand, 6793 - 6833
Alignment:
Q  290 gtgagcatgtttttcagggtttccaatcgtgacacgatttt 330  Q
    ||||||||| ||| |||||| ||||||||||||||||||||    
T  6793 gtgagcatggtttgcagggtgtccaatcgtgacacgatttt 6833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1908 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold1908
Description:

Target: scaffold1908; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 111 - 184
Target Start/End: Original strand, 1041 - 1114
Alignment:
Q  111 ctacttggtgtagttagatgcaagggaaaagaaaaggagaatggtggttcattgttaaagtggcatcatcatca 184  Q
    ||||||||||||| | ||||||||| |||  |||| | || |||||||| || |||||||||||||||||||||    
T  1041 ctacttggtgtagatggatgcaaggaaaagaaaaatgggattggtggttgatggttaaagtggcatcatcatca 1114  T

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Target: scaffold0510 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 415
Target Start/End: Original strand, 1247 - 1295
Alignment:
Q  367 gtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtg 415  Q
    |||| ||||||||||||||||||||||| ||||||| | ||||||||||    
T  1247 gttttcaggataaggttggtcgtaccttcggtcgtacgtatcaatcgtg 1295  T

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Target: scaffold0084 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 351
Target Start/End: Original strand, 25531 - 25570
Alignment:
Q  312 ccaatcgtgacacgattttgggcaatcatgacacgatttt 351  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  25531 ccaatcgtgacacgattttggccaatcgtgacacgatttt 25570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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