View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8038_high_5 (Length: 269)
Name: NF8038_high_5
Description: NF8038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8038_high_5 |
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Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 13 - 251
Target Start/End: Original strand, 8404596 - 8404834
Alignment:
| Q |
13 |
aatattaggaaggccatacattgacatgaagacactctatagtattggaaaggaactagggaggggtcaatttggtgtcacttatctttgtaccgaaaat |
112 |
Q |
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| T |
8404596 |
aatattaggaaggccatacattgacatgaagacactctatagtattggaaaggaactagggaggggtcaatttggtgtcacttatctttgtaccgaaaat |
8404695 |
T |
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| Q |
113 |
gccaccggaagaaactatgcttgtaagtccatttcgagacgaaagctaacaagaaagaaagaaattgaggatgttaaaagggaaatcatgatccttcagg |
212 |
Q |
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| T |
8404696 |
gccactggaagaaactatgcttgtaagtccatttcgagacgaaagctaacaagaaagaaagaaattgaggatgttaaaagggaaatcatgatccttcagg |
8404795 |
T |
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| Q |
213 |
acttaagtggacaaccaaacatagttgagttcaagggtg |
251 |
Q |
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| T |
8404796 |
acttaagtggacaaccaaacatagttgagttcaagggtg |
8404834 |
T |
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