View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8038_low_12 (Length: 208)

Name: NF8038_low_12
Description: NF8038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8038_low_12
NF8038_low_12
[»] chr1 (68 HSPs)
chr1 (1-207)||(11881793-11881999)
chr1 (1-208)||(11891026-11891233)
chr1 (53-207)||(11881529-11881683)
chr1 (8-207)||(11904650-11904849)
chr1 (29-208)||(11904121-11904300)
chr1 (29-207)||(11904254-11904432)
chr1 (29-207)||(11904386-11904564)
chr1 (38-207)||(11881661-11881830)
chr1 (38-207)||(11904518-11904687)
chr1 (29-207)||(11903990-11904168)
chr1 (38-207)||(11890895-11891064)
chr1 (38-149)||(11881455-11881566)
chr1 (1-110)||(52819132-52819241)
chr1 (38-149)||(11890821-11890932)
chr1 (1-57)||(11882099-11882155)
chr1 (1-57)||(11891333-11891389)
chr1 (1-57)||(11904896-11904952)
chr1 (1-60)||(11904989-11905048)
chr1 (26-99)||(52819685-52819758)
chr1 (1-57)||(52818988-52819044)
chr1 (38-96)||(11903969-11904027)
chr1 (5-62)||(11905035-11905092)
chr1 (1-62)||(11905083-11905144)
chr1 (77-149)||(52819772-52819844)
chr1 (1-62)||(52818940-52819001)
chr1 (5-60)||(11879670-11879725)
chr1 (2-61)||(11879786-11879845)
chr1 (2-45)||(11882207-11882250)
chr1 (2-45)||(11891441-11891484)
chr1 (2-60)||(11888187-11888245)
chr1 (2-60)||(11888235-11888293)
chr1 (2-60)||(11888283-11888341)
chr1 (2-60)||(11888331-11888389)
chr1 (2-60)||(11888379-11888437)
chr1 (2-60)||(11888427-11888485)
chr1 (2-60)||(11888475-11888533)
chr1 (2-60)||(11888523-11888581)
chr1 (2-60)||(11888571-11888629)
chr1 (2-60)||(11888619-11888677)
chr1 (2-60)||(11888667-11888725)
chr1 (2-60)||(11888715-11888773)
chr1 (2-60)||(11888763-11888821)
chr1 (2-60)||(11888811-11888869)
chr1 (2-60)||(11888859-11888917)
chr1 (2-60)||(11888907-11888965)
chr1 (2-60)||(11888955-11889013)
chr1 (2-60)||(11889003-11889061)
chr1 (2-60)||(11889051-11889109)
chr1 (2-60)||(11889099-11889157)
chr1 (2-60)||(11889147-11889205)
chr1 (2-60)||(11889195-11889253)
chr1 (2-60)||(11889243-11889301)
chr1 (2-60)||(11889291-11889349)
chr1 (2-60)||(11889339-11889397)
chr1 (2-60)||(11889387-11889445)
chr1 (2-60)||(11889435-11889493)
chr1 (2-60)||(11889483-11889541)
chr1 (1-50)||(11882298-11882347)
chr1 (1-58)||(11889773-11889830)
chr1 (1-50)||(11891532-11891581)
chr1 (1-62)||(11904939-11905000)
chr1 (77-138)||(52819604-52819665)
chr1 (107-143)||(11879623-11879659)
chr1 (113-149)||(11882475-11882511)
chr1 (113-149)||(11891709-11891745)
chr1 (113-149)||(52818632-52818668)
chr1 (113-149)||(52818824-52818860)
chr1 (2-54)||(52821296-52821348)
[»] chr4 (8 HSPs)
chr4 (5-62)||(24420418-24420475)
chr4 (5-62)||(24471151-24471208)
chr4 (5-53)||(24476726-24476774)
chr4 (10-48)||(24420327-24420365)
chr4 (8-48)||(24406556-24406596)
chr4 (5-49)||(24421330-24421374)
chr4 (5-49)||(24470541-24470585)
chr4 (5-49)||(24477467-24477511)


Alignment Details
Target: chr1 (Bit Score: 195; Significance: 1e-106; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 11881999 - 11881793
Alignment:
Q  1 atagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtggagaataataatggaccggtggaggtggtgagttgtacttg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11881999 atagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtggagaataataatggaccggtggaggtggtgagttgtacttg 11881900  T
Q  101 taaaccggtgcgggtggtggaggtgatttgtagtagtaaggagttggtgccgctttcacagggggaggaggtgacttgtaggtgtatggaggtgaataag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||     
T  11881899 taaaccggtgcgggtggtggaggtgatttgtagtagtaaggagttggtgccactttcacagggggaggaggtgacttgtaggtatatggaggtgaataat 11881800  T
Q  201 aatggac 207  Q
    |||||||    
T  11881799 aatggac 11881793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 11891233 - 11891026
Alignment:
Q  1 atagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtggagaataataatggaccggtggaggtggtgagttgtacttg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11891233 atagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtggagaataataatggaccggtggaggtggtgagttgtacttg 11891134  T
Q  101 taaaccggtgcgggtggtggaggtgatttgtagtagtaaggagttggtgccgctttcacagggggaggaggtgacttgtaggtgtatggaggtgaataag 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||      
T  11891133 taaaccggtgcgggaggtggaggtgatttgtagtagtaaggagttggtgctgctttcacaggaggaggaggtgacttataggtgtatggaggtgaatagt 11891034  T
Q  201 aatggact 208  Q
    ||||||||    
T  11891033 aatggact 11891026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 53 - 207
Target Start/End: Complemental strand, 11881683 - 11881529
Alignment:
Q  53 tatggtggagaataataatggaccggtggaggtggtgagttgtacttgtaaaccggtgcgggtggtggaggtgatttgtagtagtaaggagttggtgccg 152  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11881683 tatggtggtgaataataatggaccggtggagggggtgagttgtacttgtaaaccggtgcgggtggtggaggtgatttgtagtagtaaggagttggtgccg 11881584  T
Q  153 ctttcacagggggaggaggtgacttgtaggtgtatggaggtgaataagaatggac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11881583 ctttcacagggggaggaggtgacttgtaggtgtatggaggtgaataataatggac 11881529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 11904849 - 11904650
Alignment:
Q  8 ggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtggagaataataatggaccggtggaggtggtgagttgtacttgtaaaccg 107  Q
    ||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||||    
T  11904849 ggtggaggaggggatggtgatggtgggggtggtgacttatagtagtatggaggagaataataatggactggtggaggaggtgagttgtacttataaaccg 11904750  T
Q  108 gtgcgggtggtggaggtgatttgtagtagtaaggagttggtgccgctttcacagggggaggaggtgacttgtaggtgtatggaggtgaataagaatggac 207  Q
    |||| || ||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||    
T  11904749 gtgcaggaggtggaggtgatttgtagtagtatggagttggtgctactttcacagggggaggaggtgacttgtaggtatatggtggtgaataataatggac 11904650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 29 - 208
Target Start/End: Complemental strand, 11904300 - 11904121
Alignment:
Q  29 ggtgggggtggtgacttgtagtagtatggtggagaataataatggaccggtggaggtggtgagttgtacttgtaaaccggtgcgggtggtggaggtgatt 128  Q
    ||||| || ||||||||||||   |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11904300 ggtggaggaggtgacttgtaggtatatggtggtgaataataatggaccggtggaggtggggagttgtacttgtaaaccggtgcgggtggtggaggtgatt 11904201  T
Q  129 tgtagtagtaaggagttggtgccgctttcacagggggaggaggtgacttgtaggtgtatggaggtgaataagaatggact 208  Q
    | |||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||| ||||||||| ||||||||    
T  11904200 tatagtagtaaggagttggtgccgttttcacaggtggaggaggtgacttgtaggtatatggtggtgaataataatggact 11904121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 29 - 207
Target Start/End: Complemental strand, 11904432 - 11904254
Alignment:
Q  29 ggtgggggtggtgacttgtagtagtatggtggagaataataatggaccggtggaggtggtgagttgtacttgtaaaccggtgcgggtggtggaggtgatt 128  Q
    ||||| || ||||||||||||   |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11904432 ggtggaggaggtgacttgtaggtatatggtggtgaataataatggaccggtggaggtggggagttgtacttgtaaaccggtgcgggtggtggaggtgatt 11904333  T
Q  129 tgtagtagtaaggagttggtgccgctttcacagggggaggaggtgacttgtaggtgtatggaggtgaataagaatggac 207  Q
    | |||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||    
T  11904332 tatagtagtaaggagttggtgccgttttcacaggtggaggaggtgacttgtaggtatatggtggtgaataataatggac 11904254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 29 - 207
Target Start/End: Complemental strand, 11904564 - 11904386
Alignment:
Q  29 ggtgggggtggtgacttgtagtagtatggtggagaataataatggaccggtggaggtggtgagttgtacttgtaaaccggtgcgggtggtggaggtgatt 128  Q
    ||||| || ||||||||||||   |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11904564 ggtggaggaggtgacttgtaggtatatggtggtgaataataatggaccggtggaggtggggagttgtacttgtaaaccggtgcgggtggtggaggtgatt 11904465  T
Q  129 tgtagtagtaaggagttggtgccgctttcacagggggaggaggtgacttgtaggtgtatggaggtgaataagaatggac 207  Q
    | |||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||    
T  11904464 tatagtagtaaggagttggtgccgttttcacaggtggaggaggtgacttgtaggtatatggtggtgaataataatggac 11904386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 38 - 207
Target Start/End: Complemental strand, 11881830 - 11881661
Alignment:
Q  38 ggtgacttgtagtagtatggtggagaataataatggaccggtggaggtggtgagttgtacttgtaaaccggtgcgggtggtggaggtgatttgtagtagt 137  Q
    ||||||||||||   ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11881830 ggtgacttgtaggtatatggaggtgaataataatggaccggtggaggtggggagttgtacttgtaaaccggtgcgggaggtggaggtgatttgtagtagt 11881731  T
Q  138 aaggagttggtgccgctttcacagggggaggaggtgacttgtaggtgtatggaggtgaataagaatggac 207  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| |||||||    
T  11881730 aaggagttggtgccgctttcacagggggaggaggtgacttataggtatatggtggtgaataataatggac 11881661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 38 - 207
Target Start/End: Complemental strand, 11904687 - 11904518
Alignment:
Q  38 ggtgacttgtagtagtatggtggagaataataatggaccggtggaggtggtgagttgtacttgtaaaccggtgcgggtggtggaggtgatttgtagtagt 137  Q
    ||||||||||||   |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11904687 ggtgacttgtaggtatatggtggtgaataataatggaccggtggaggtggggagttgtacttgtaaaccggtgcgggtggtggaggtgatttatagtagt 11904588  T
Q  138 aaggagttggtgccgctttcacagggggaggaggtgacttgtaggtgtatggaggtgaataagaatggac 207  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||    
T  11904587 aaggagttggtgccgttttcacaggtggaggaggtgacttgtaggtatatggtggtgaataataatggac 11904518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 29 - 207
Target Start/End: Complemental strand, 11904168 - 11903990
Alignment:
Q  29 ggtgggggtggtgacttgtagtagtatggtggagaataataatggaccggtggaggtggtgagttgtacttgtaaaccggtgcgggtggtggaggtgatt 128  Q
    ||||| || ||||||||||||   |||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11904168 ggtggaggaggtgacttgtaggtatatggtggtgaataataatggactggtggaggtggggagttgtacttgtaaaccggtgcgggtggtggaggtgatt 11904069  T
Q  129 tgtagtagtaaggagttggtgccgctttcacagggggaggaggtgacttgtaggtgtatggaggtgaataagaatggac 207  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||| ||| |||||||    
T  11904068 tgtagtagtaaggagttggtgccgctttcacagggggagggggtgacttgtagtaatatggaggtgagtaataatggac 11903990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 38 - 207
Target Start/End: Complemental strand, 11891064 - 11890895
Alignment:
Q  38 ggtgacttgtagtagtatggtggagaataataatggaccggtggaggtggtgagttgtacttgtaaaccggtgcgggtggtggaggtgatttgtagtagt 137  Q
    |||||||| |||  |||||| || ||||| |||||||| || |||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  11891064 ggtgacttataggtgtatggaggtgaatagtaatggactggcggaggtggggagttgtacttgtaaactggtgcgggaggtggaggtgatttgtagtagt 11890965  T
Q  138 aaggagttggtgccgctttcacagggggaggaggtgacttgtaggtgtatggaggtgaataagaatggac 207  Q
    |||||||||||||||||||||| |||||||||||||||||||||   ||||||||||| ||| |||||||    
T  11890964 aaggagttggtgccgctttcacggggggaggaggtgacttgtagtaatatggaggtgagtaataatggac 11890895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 38 - 149
Target Start/End: Complemental strand, 11881566 - 11881455
Alignment:
Q  38 ggtgacttgtagtagtatggtggagaataataatggaccggtggaggtggtgagttgtacttgtaaaccggtgcgggtggtggaggtgatttgtagtagt 137  Q
    ||||||||||||  |||||| || ||||||||||||||||||||||||||||||||||| |||||||| |||| ||| ||||||||||||||||||||||    
T  11881566 ggtgacttgtaggtgtatggaggtgaataataatggaccggtggaggtggtgagttgtatttgtaaactggtgagggaggtggaggtgatttgtagtagt 11881467  T
Q  138 aaggagttggtg 149  Q
    ||||||||||||    
T  11881466 aaggagttggtg 11881455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 52819132 - 52819241
Alignment:
Q  1 atagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtggagaataataatggaccggtggaggtggtgagttgtacttg 100  Q
    ||||||||| || ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  52819132 atagtatggagggggaggtgatggggatggtggaggtggtgacttatagtagtatggtggagaataataatggacaggtggaggtggtgacttgtacttg 52819231  T
Q  101 taaaccggtg 110  Q
    ||||| ||||    
T  52819232 taaactggtg 52819241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 38 - 149
Target Start/End: Complemental strand, 11890932 - 11890821
Alignment:
Q  38 ggtgacttgtagtagtatggtggagaataataatggaccggtggaggtggtgagttgtacttgtaaaccggtgcgggtggtggaggtgatttgtagtagt 137  Q
    |||||||||||||| ||||| || || ||||||||||| ||||||||||||||||| ||||||||||| |||| ||| ||||||||||||||||||||||    
T  11890932 ggtgacttgtagtaatatggaggtgagtaataatggacgggtggaggtggtgagttatacttgtaaactggtgagggaggtggaggtgatttgtagtagt 11890833  T
Q  138 aaggagttggtg 149  Q
    ||||||||||||    
T  11890832 aaggagttggtg 11890821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 11882155 - 11882099
Alignment:
Q  1 atagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatgg 57  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  11882155 atagtatggtggaggaggtgatggtgatggtgggggtggtgacttatagtagtatgg 11882099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 11891389 - 11891333
Alignment:
Q  1 atagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatgg 57  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  11891389 atagtatggtggaggaggtgatggtgatggtgggggtggtgacttatagtagtatgg 11891333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 11904952 - 11904896
Alignment:
Q  1 atagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatgg 57  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  11904952 atagtatggtggaggaggtgatggggatggtgggggtggtgacttatagtagtatgg 11904896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 11905048 - 11904989
Alignment:
Q  1 atagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||    
T  11905048 atagtatggtggaggaggagatggagatggtggaggtggtgacttgtaatagtatggtgg 11904989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 52819685 - 52819758
Alignment:
Q  26 gatggtgggggtggtgacttgtagtagtatggtggagaataataatggaccggtggaggtggtgagttgtactt 99  Q
    ||||||||||||||||||||||| || ||||| |||||||| | |||||| ||||||||||||||  |||||||    
T  52819685 gatggtgggggtggtgacttgtaataatatggaggagaatattgatggacaggtggaggtggtgatgtgtactt 52819758  T

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Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 52818988 - 52819044
Alignment:
Q  1 atagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatgg 57  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||    
T  52818988 atagtatggtggaggaggggatggtgatggtggtggtggtgacttatagtagtatgg 52819044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 11904027 - 11903969
Alignment:
Q  38 ggtgacttgtagtagtatggtggagaataataatggaccggtggaggtggtgagttgta 96  Q
    |||||||||||||| ||||| || || ||||||||||| ||||||||||||||||||||    
T  11904027 ggtgacttgtagtaatatggaggtgagtaataatggacgggtggaggtggtgagttgta 11903969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 11905092 - 11905035
Alignment:
Q  5 tatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtggag 62  Q
    |||||||||||||| ||||| |||||||| ||||||||||| || |||||||||||||    
T  11905092 tatggtggaggaggggatggggatggtggaggtggtgacttataatagtatggtggag 11905035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 11905144 - 11905083
Alignment:
Q  1 atagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtggag 62  Q
    |||||||||||||||||| ||||| |||||||| | ||||||||| ||||| ||||||||||    
T  11905144 atagtatggtggaggaggggatggggatggtggagctggtgacttatagtaatatggtggag 11905083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 52819772 - 52819844
Alignment:
Q  77 ggtggaggtggtgagttgtacttgtaaaccggtgcgggtggtggaggtgatttgtagtagtaaggagttggtg 149  Q
    |||||||||||||| |||||  | ||||||||||  || || |||||||| ||||||||||||||||||||||    
T  52819772 ggtggaggtggtgacttgtatatataaaccggtgaaggaggaggaggtgacttgtagtagtaaggagttggtg 52819844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 52818940 - 52819001
Alignment:
Q  1 atagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtggag 62  Q
    ||||||||| || ||||| ||||| |||||||| ||||||||||| || |||||||||||||    
T  52818940 atagtatggagggggaggggatggtgatggtggaggtggtgacttataatagtatggtggag 52819001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 11879725 - 11879670
Alignment:
Q  5 tatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    |||||||| |||||||| ||||||||||| || || |||||||| |||||||||||    
T  11879725 tatggtggtggaggtgagggagatggtggtggaggagacttgtaatagtatggtgg 11879670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 11879845 - 11879786
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgga 61  Q
    ||||||||||| ||||| ||||| || ||||| ||||| |||||||| ||||||||||||    
T  11879845 tagtatggtggtggaggagatggtgaaggtggtggtggggacttgtaatagtatggtgga 11879786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 11882250 - 11882207
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgactt 45  Q
    ||||||||||||||||| || || ||||||||||||||||||||    
T  11882250 tagtatggtggaggaggggacggggatggtgggggtggtgactt 11882207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 11891484 - 11891441
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgactt 45  Q
    ||||||||||||||||| || || ||||||||||||||||||||    
T  11891484 tagtatggtggaggaggggacggggatggtgggggtggtgactt 11891441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11888245 - 11888187
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11888245 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11888187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11888293 - 11888235
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11888293 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11888235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11888341 - 11888283
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11888341 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11888283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11888389 - 11888331
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11888389 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11888331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11888437 - 11888379
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11888437 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11888379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11888485 - 11888427
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11888485 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11888427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11888533 - 11888475
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11888533 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11888475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11888581 - 11888523
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11888581 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11888523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11888629 - 11888571
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11888629 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11888571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11888677 - 11888619
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11888677 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11888619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11888725 - 11888667
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11888725 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11888667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11888773 - 11888715
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11888773 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11888715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11888821 - 11888763
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11888821 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11888763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11888869 - 11888811
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11888869 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11888811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11888917 - 11888859
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11888917 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11888859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11888965 - 11888907
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11888965 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11888907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11889013 - 11888955
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11889013 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11888955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11889061 - 11889003
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11889061 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11889003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11889109 - 11889051
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11889109 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11889051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11889157 - 11889099
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11889157 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11889099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11889205 - 11889147
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11889205 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11889147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11889253 - 11889195
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11889253 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11889195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11889301 - 11889243
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11889301 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11889243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11889349 - 11889291
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11889349 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11889291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11889397 - 11889339
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11889397 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11889339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11889445 - 11889387
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11889445 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11889387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11889493 - 11889435
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11889493 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11889435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11889541 - 11889483
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtgg 60  Q
    ||||||||||| ||||| || || |||||||| ||||| || |||||||||||||||||    
T  11889541 tagtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagtatggtgg 11889483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 11882347 - 11882298
Alignment:
Q  1 atagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagt 50  Q
    ||||||||| || ||||| ||||| |||||||||||||||||||| ||||    
T  11882347 atagtatggagggggaggggatggtgatggtgggggtggtgacttatagt 11882298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 11889830 - 11889773
Alignment:
Q  1 atagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggt 58  Q
    |||||||||||| ||||| ||||| || ||||| ||||| |||||||| |||||||||    
T  11889830 atagtatggtggtggaggagatggtgaaggtggtggtggggacttgtaatagtatggt 11889773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 11891581 - 11891532
Alignment:
Q  1 atagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagt 50  Q
    ||||||||| || ||||| ||||| |||||||||||||||||||| ||||    
T  11891581 atagtatggagggggaggggatggtgatggtgggggtggtgacttatagt 11891532  T

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Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 11905000 - 11904939
Alignment:
Q  1 atagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtggag 62  Q
    |||||||||||| || || ||||| |||||||| || || |||||||| |||||||||||||    
T  11905000 atagtatggtggtggtggagatggtgatggtggagggggggacttgtaatagtatggtggag 11904939  T

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Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 138
Target Start/End: Original strand, 52819604 - 52819665
Alignment:
Q  77 ggtggaggtggtgagttgtacttgtaaaccggtgcgggtggtggaggtgatttgtagtagta 138  Q
    |||||||||||||| |||||||||||||  ||||  || || |||||||| |||||||||||    
T  52819604 ggtggaggtggtgaattgtacttgtaaattggtgttggaggaggaggtgacttgtagtagta 52819665  T

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Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 143
Target Start/End: Complemental strand, 11879659 - 11879623
Alignment:
Q  107 ggtgcgggtggtggaggtgatttgtagtagtaaggag 143  Q
    |||| |||||||||||| |||||||||||||||||||    
T  11879659 ggtgagggtggtggaggagatttgtagtagtaaggag 11879623  T

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Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 11882511 - 11882475
Alignment:
Q  113 ggtggtggaggtgatttgtagtagtaaggagttggtg 149  Q
    |||||||||||||||||||| |||||||||| |||||    
T  11882511 ggtggtggaggtgatttgtaatagtaaggaggtggtg 11882475  T

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Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 11891745 - 11891709
Alignment:
Q  113 ggtggtggaggtgatttgtagtagtaaggagttggtg 149  Q
    |||||||||||||||||||| |||||||||| |||||    
T  11891745 ggtggtggaggtgatttgtaatagtaaggaggtggtg 11891709  T

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Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 52818632 - 52818668
Alignment:
Q  113 ggtggtggaggtgatttgtagtagtaaggagttggtg 149  Q
    |||||||||||||||||||||||||| |||| |||||    
T  52818632 ggtggtggaggtgatttgtagtagtagggaggtggtg 52818668  T

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Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 52818824 - 52818860
Alignment:
Q  113 ggtggtggaggtgatttgtagtagtaaggagttggtg 149  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  52818824 ggtggtggaggtgatttgtagtaataaggaggtggtg 52818860  T

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Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 52821296 - 52821348
Alignment:
Q  2 tagtatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagta 54  Q
    ||||| |||||||||||||| || || ||||| || |||||||||||||||||    
T  52821296 tagtaaggtggaggaggtgaaggtgaaggtggtggaggtgacttgtagtagta 52821348  T

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Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 24420418 - 24420475
Alignment:
Q  5 tatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtggag 62  Q
    ||||||||||||||||||||||| ||||| ||||| || |||||||||||||| ||||    
T  24420418 tatggtggaggaggtgatggagaaggtggaggtggagatttgtagtagtatggaggag 24420475  T

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Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 24471208 - 24471151
Alignment:
Q  5 tatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagtatggtggag 62  Q
    ||||||||||||||||||||||| ||||| ||||| || |||||||||||||| ||||    
T  24471208 tatggtggaggaggtgatggagaaggtggaggtggagatttgtagtagtatggaggag 24471151  T

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Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 24476726 - 24476774
Alignment:
Q  5 tatggtggaggaggtgatggagatggtgggggtggtgacttgtagtagt 53  Q
    ||||||||||||||||||||||| ||||| ||||| || ||||||||||    
T  24476726 tatggtggaggaggtgatggagaaggtggaggtggagatttgtagtagt 24476774  T

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Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 48
Target Start/End: Original strand, 24420327 - 24420365
Alignment:
Q  10 tggaggaggtgatggagatggtgggggtggtgacttgta 48  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  24420327 tggaggaggtgatggagatggtggaggtggagacttgta 24420365  T

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Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 24406556 - 24406596
Alignment:
Q  8 ggtggaggaggtgatggagatggtgggggtggtgacttgta 48  Q
    |||||||||||||| ||||||||||||||||| || |||||    
T  24406556 ggtggaggaggtgaaggagatggtgggggtggagatttgta 24406596  T

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Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 24421330 - 24421374
Alignment:
Q  5 tatggtggaggaggtgatggagatggtgggggtggtgacttgtag 49  Q
    |||||||| |||||||| |||||||| || |||||||||||||||    
T  24421330 tatggtgggggaggtgaaggagatggaggaggtggtgacttgtag 24421374  T

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Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 24470585 - 24470541
Alignment:
Q  5 tatggtggaggaggtgatggagatggtgggggtggtgacttgtag 49  Q
    |||||||| |||||||| |||||||| || |||||||||||||||    
T  24470585 tatggtgggggaggtgaaggagatggaggaggtggtgacttgtag 24470541  T

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Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 24477467 - 24477511
Alignment:
Q  5 tatggtggaggaggtgatggagatggtgggggtggtgacttgtag 49  Q
    |||||||| |||||||| |||||||| || |||||||||||||||    
T  24477467 tatggtgggggaggtgaaggagatggaggaggtggtgacttgtag 24477511  T

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