View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8038_low_6 (Length: 276)
Name: NF8038_low_6
Description: NF8038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8038_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 18 - 259
Target Start/End: Complemental strand, 40714887 - 40714646
Alignment:
| Q |
18 |
tcattgtggtagtgggttgtttaagtctttatatattttcctgccccattacaattgctaattgggtgctgattttgtttttaagtgttgatatattttg |
117 |
Q |
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| T |
40714887 |
tcattgtggtagtgggttgtttaagtctttatatattttcctgccccattacaattgctaattgggtgctgattttgtttttaagtgttgatatattttg |
40714788 |
T |
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| Q |
118 |
ctgtgaatcacccaattttggctgattttgctatgtgatggaaggacagcacataaagctttttacttgatatctcattgtcagagaagtggaaaaacaa |
217 |
Q |
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| T |
40714787 |
ctgtgaatcacccaattttggctgattttgctatgtgatggaaggacagcacataaagctttttacttgatatctctttgtcagagaagtggaaaaacaa |
40714688 |
T |
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| Q |
218 |
ttaattattaatgtcgtttacgctacagaatgtacatgatgt |
259 |
Q |
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| T |
40714687 |
ttaattattaatgtcgtttacgctacagaatgtacatgatgt |
40714646 |
T |
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