View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8039_low_17 (Length: 270)

Name: NF8039_low_17
Description: NF8039
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8039_low_17
NF8039_low_17
[»] chr8 (46 HSPs)
chr8 (19-254)||(34551059-34551294)
chr8 (41-111)||(34770853-34770923)
chr8 (38-126)||(31862451-31862539)
chr8 (44-125)||(12361156-12361237)
chr8 (56-148)||(26284797-26284889)
chr8 (56-123)||(43709249-43709316)
chr8 (38-229)||(9699959-9700154)
chr8 (37-126)||(29699211-29699298)
chr8 (57-126)||(7645955-7646024)
chr8 (39-160)||(41620281-41620402)
chr8 (45-125)||(6509328-6509408)
chr8 (37-117)||(31915302-31915382)
chr8 (56-100)||(38260508-38260552)
chr8 (43-125)||(26473777-26473860)
chr8 (37-124)||(37353275-37353361)
chr8 (56-126)||(8062500-8062570)
chr8 (56-126)||(10075575-10075645)
chr8 (38-160)||(39551199-39551321)
chr8 (56-125)||(13652191-13652260)
chr8 (56-125)||(13710834-13710903)
chr8 (37-98)||(42597358-42597419)
chr8 (75-124)||(45098999-45099048)
chr8 (38-106)||(2093237-2093305)
chr8 (37-145)||(4558755-4558863)
chr8 (39-123)||(30627929-30628013)
chr8 (47-114)||(6864495-6864562)
chr8 (75-126)||(9956838-9956889)
chr8 (39-126)||(38874605-38874692)
chr8 (67-125)||(1433535-1433593)
chr8 (56-126)||(11415130-11415200)
chr8 (56-126)||(11795068-11795138)
chr8 (80-126)||(27028831-27028877)
chr8 (37-111)||(31884551-31884625)
chr8 (39-112)||(787144-787217)
chr8 (56-117)||(13561345-13561406)
chr8 (33-126)||(21653034-21653127)
chr8 (39-124)||(29973040-29973125)
chr8 (37-126)||(30013175-30013264)
chr8 (37-126)||(39561565-39561654)
chr8 (56-153)||(40157488-40157585)
chr8 (45-125)||(778354-778434)
chr8 (37-126)||(3537053-3537144)
chr8 (37-85)||(7026688-7026736)
chr8 (81-121)||(25097387-25097427)
chr8 (33-125)||(37822683-37822775)
chr8 (32-84)||(42237488-42237540)
[»] chr7 (50 HSPs)
chr7 (40-124)||(30456476-30456560)
chr7 (40-124)||(29363478-29363562)
chr7 (33-111)||(1417217-1417295)
chr7 (65-164)||(46082019-46082120)
chr7 (23-116)||(28340878-28340970)
chr7 (75-164)||(46104553-46104642)
chr7 (42-146)||(27548225-27548329)
chr7 (37-124)||(17989049-17989136)
chr7 (37-111)||(5006548-5006622)
chr7 (28-162)||(5628555-5628687)
chr7 (75-125)||(39542325-39542375)
chr7 (56-146)||(44821935-44822025)
chr7 (56-117)||(28340429-28340490)
chr7 (37-126)||(40689010-40689099)
chr7 (78-150)||(24363601-24363673)
chr7 (37-125)||(28165048-28165136)
chr7 (39-126)||(21453253-21453340)
chr7 (37-124)||(22759143-22759230)
chr7 (62-125)||(40439036-40439099)
chr7 (34-93)||(45777228-45777287)
chr7 (61-119)||(18350738-18350796)
chr7 (43-125)||(31338471-31338553)
chr7 (40-126)||(38010674-38010760)
chr7 (61-125)||(5569661-5569725)
chr7 (40-112)||(32730289-32730361)
chr7 (37-85)||(35536064-35536112)
chr7 (82-126)||(48917370-48917414)
chr7 (173-228)||(529459-529514)
chr7 (43-106)||(946715-946778)
chr7 (45-124)||(12110325-12110404)
chr7 (56-123)||(24895332-24895399)
chr7 (56-123)||(24909640-24909707)
chr7 (65-164)||(25670572-25670671)
chr7 (37-80)||(39591537-39591580)
chr7 (38-153)||(44151477-44151592)
chr7 (40-126)||(3610764-3610850)
chr7 (74-160)||(33645951-33646036)
chr7 (37-126)||(46825055-46825145)
chr7 (56-126)||(47177612-47177682)
chr7 (33-78)||(5272892-5272937)
chr7 (37-98)||(9527142-9527203)
chr7 (75-124)||(28691861-28691910)
chr7 (61-126)||(30812129-30812194)
chr7 (37-170)||(39551528-39551661)
chr7 (61-153)||(6263361-6263452)
chr7 (76-124)||(30723065-30723113)
chr7 (37-152)||(33894580-33894699)
chr7 (78-126)||(40252131-40252179)
chr7 (37-93)||(45813237-45813293)
chr7 (40-124)||(47046134-47046218)
[»] chr4 (56 HSPs)
chr4 (37-125)||(10192241-10192328)
chr4 (38-164)||(2996531-2996657)
chr4 (65-126)||(36722693-36722754)
chr4 (39-126)||(52735081-52735168)
chr4 (37-122)||(17884025-17884110)
chr4 (23-126)||(437456-437559)
chr4 (56-103)||(927268-927315)
chr4 (59-126)||(43824262-43824329)
chr4 (37-118)||(27623592-27623676)
chr4 (28-94)||(42321935-42322000)
chr4 (37-106)||(3175908-3175977)
chr4 (37-126)||(11802491-11802580)
chr4 (57-126)||(18628567-18628636)
chr4 (38-122)||(18630638-18630722)
chr4 (33-117)||(49085942-49086026)
chr4 (56-151)||(7694009-7694104)
chr4 (62-124)||(8468930-8468992)
chr4 (37-103)||(25885816-25885882)
chr4 (38-152)||(46415790-46415904)
chr4 (38-124)||(56480306-56480392)
chr4 (37-90)||(4071839-4071892)
chr4 (37-98)||(8130131-8130192)
chr4 (57-162)||(23819066-23819171)
chr4 (37-126)||(24929450-24929539)
chr4 (61-126)||(29778776-29778841)
chr4 (83-164)||(33534155-33534236)
chr4 (37-126)||(49219096-49219185)
chr4 (33-126)||(51630064-51630157)
chr4 (23-126)||(8422863-8422963)
chr4 (42-153)||(42685386-42685497)
chr4 (59-126)||(42866047-42866114)
chr4 (45-91)||(13949903-13949949)
chr4 (80-126)||(17822889-17822935)
chr4 (32-98)||(24160547-24160613)
chr4 (80-126)||(27721717-27721763)
chr4 (41-103)||(29194450-29194512)
chr4 (56-126)||(50004168-50004238)
chr4 (32-98)||(53626728-53626794)
chr4 (37-126)||(30207595-30207683)
chr4 (45-106)||(32920444-32920505)
chr4 (33-78)||(41701513-41701558)
chr4 (37-126)||(45128334-45128423)
chr4 (37-126)||(47118989-47119078)
chr4 (81-122)||(50742864-50742905)
chr4 (65-126)||(53943591-53943652)
chr4 (80-125)||(55414445-55414490)
chr4 (37-98)||(55870393-55870454)
chr4 (69-101)||(7297539-7297571)
chr4 (56-115)||(7368090-7368150)
chr4 (90-126)||(10194718-10194754)
chr4 (61-125)||(10206193-10206257)
chr4 (69-125)||(11264290-11264346)
chr4 (56-108)||(24091439-24091491)
chr4 (34-126)||(27043854-27043946)
chr4 (38-98)||(36460544-36460604)
chr4 (41-117)||(54325070-54325146)
[»] chr2 (60 HSPs)
chr2 (33-113)||(28933777-28933857)
chr2 (40-126)||(11513858-11513944)
chr2 (56-112)||(37276722-37276778)
chr2 (38-117)||(28803539-28803618)
chr2 (35-124)||(37292373-37292462)
chr2 (56-164)||(40158694-40158802)
chr2 (38-125)||(14666506-14666593)
chr2 (75-125)||(9477947-9477997)
chr2 (43-125)||(36863650-36863732)
chr2 (41-126)||(6993748-6993833)
chr2 (37-126)||(10563582-10563671)
chr2 (59-124)||(13869121-13869186)
chr2 (85-126)||(24097813-24097854)
chr2 (67-124)||(39983329-39983386)
chr2 (83-164)||(43065436-43065517)
chr2 (37-125)||(656802-656890)
chr2 (37-117)||(10143129-10143209)
chr2 (42-122)||(33942112-33942192)
chr2 (43-126)||(9395093-9395176)
chr2 (37-124)||(15377722-15377809)
chr2 (39-98)||(40145421-40145480)
chr2 (43-126)||(43570377-43570460)
chr2 (56-122)||(1625876-1625942)
chr2 (19-109)||(17952742-17952831)
chr2 (40-126)||(22681209-22681295)
chr2 (56-102)||(35755550-35755596)
chr2 (76-126)||(42409327-42409377)
chr2 (33-126)||(2410069-2410162)
chr2 (37-114)||(3673764-3673841)
chr2 (44-153)||(5043557-5043666)
chr2 (32-125)||(6988067-6988160)
chr2 (56-125)||(18066104-18066173)
chr2 (43-124)||(43141834-43141915)
chr2 (41-125)||(12313198-12313282)
chr2 (39-99)||(23143029-23143089)
chr2 (39-99)||(23554819-23554879)
chr2 (37-125)||(25790083-25790171)
chr2 (40-84)||(41851969-41852013)
chr2 (23-126)||(4026761-4026863)
chr2 (89-152)||(9530726-9530789)
chr2 (42-125)||(13630306-13630389)
chr2 (62-105)||(29300627-29300670)
chr2 (79-126)||(43985027-43985074)
chr2 (110-160)||(11063518-11063568)
chr2 (67-160)||(30552633-30552727)
chr2 (40-126)||(34339866-34339952)
chr2 (37-122)||(35099627-35099713)
chr2 (37-87)||(39929824-39929874)
chr2 (37-126)||(1493537-1493626)
chr2 (37-126)||(5133729-5133818)
chr2 (40-125)||(9556199-9556284)
chr2 (80-125)||(10884546-10884591)
chr2 (37-126)||(33256697-33256786)
chr2 (37-123)||(42907316-42907404)
chr2 (45-152)||(7103480-7103588)
chr2 (37-93)||(11344341-11344397)
chr2 (89-161)||(13234515-13234587)
chr2 (66-126)||(16503338-16503398)
chr2 (28-124)||(18962064-18962159)
chr2 (37-93)||(37053551-37053607)
[»] chr6 (43 HSPs)
chr6 (43-126)||(32386587-32386670)
chr6 (37-153)||(281845-281961)
chr6 (37-163)||(4006671-4006797)
chr6 (37-123)||(33787772-33787858)
chr6 (37-124)||(24782016-24782103)
chr6 (56-160)||(2117379-2117483)
chr6 (65-126)||(1275134-1275195)
chr6 (37-125)||(5328931-5329018)
chr6 (56-124)||(9912031-9912099)
chr6 (56-124)||(10400245-10400313)
chr6 (42-125)||(1497943-1498026)
chr6 (56-127)||(18264305-18264376)
chr6 (37-108)||(22742323-22742394)
chr6 (37-126)||(24836226-24836312)
chr6 (43-126)||(31671098-31671181)
chr6 (75-126)||(31812037-31812088)
chr6 (37-111)||(14492259-14492333)
chr6 (19-160)||(9667975-9668115)
chr6 (47-116)||(9732443-9732512)
chr6 (37-98)||(10150304-10150365)
chr6 (56-125)||(32848621-32848690)
chr6 (46-120)||(5550098-5550169)
chr6 (65-125)||(8035173-8035233)
chr6 (57-125)||(25100020-25100088)
chr6 (37-117)||(29274262-29274342)
chr6 (37-164)||(33500466-33500594)
chr6 (37-116)||(1402953-1403032)
chr6 (82-160)||(4420645-4420723)
chr6 (22-92)||(11363426-11363495)
chr6 (45-111)||(22691559-22691625)
chr6 (32-78)||(29940748-29940794)
chr6 (56-114)||(33067135-33067192)
chr6 (41-158)||(3155137-3155253)
chr6 (65-126)||(4247085-4247146)
chr6 (33-70)||(5551415-5551452)
chr6 (37-126)||(9093580-9093669)
chr6 (95-164)||(30523952-30524021)
chr6 (70-126)||(3168285-3168341)
chr6 (38-78)||(7713983-7714023)
chr6 (77-125)||(20368205-20368253)
chr6 (80-148)||(32386108-32386176)
chr6 (56-92)||(33828622-33828658)
chr6 (37-125)||(35094952-35095040)
[»] chr1 (73 HSPs)
chr1 (19-126)||(4200169-4200275)
chr1 (38-125)||(7218099-7218186)
chr1 (37-164)||(25479538-25479665)
chr1 (29-126)||(27738204-27738301)
chr1 (36-160)||(30371104-30371228)
chr1 (37-124)||(6932987-6933074)
chr1 (38-125)||(36151530-36151617)
chr1 (56-126)||(25005821-25005891)
chr1 (37-122)||(44032027-44032112)
chr1 (37-98)||(49517027-49517088)
chr1 (37-125)||(5756711-5756799)
chr1 (56-123)||(5546677-5546744)
chr1 (56-115)||(17269226-17269285)
chr1 (43-140)||(5592695-5592792)
chr1 (68-125)||(33976674-33976731)
chr1 (76-125)||(45667787-45667836)
chr1 (37-153)||(4622050-4622166)
chr1 (37-125)||(6074431-6074519)
chr1 (37-153)||(12564496-12564611)
chr1 (56-116)||(25006068-25006128)
chr1 (33-93)||(40304111-40304171)
chr1 (59-106)||(6110211-6110258)
chr1 (37-153)||(28689449-28689567)
chr1 (40-119)||(33527178-33527257)
chr1 (67-126)||(35179126-35179185)
chr1 (67-126)||(37241846-37241905)
chr1 (59-126)||(44422678-44422745)
chr1 (80-126)||(5924055-5924101)
chr1 (59-160)||(15579461-15579562)
chr1 (40-126)||(31517764-31517850)
chr1 (33-153)||(3224376-3224496)
chr1 (95-164)||(11639402-11639471)
chr1 (59-124)||(15515520-15515585)
chr1 (76-153)||(27963367-27963444)
chr1 (37-98)||(28467359-28467420)
chr1 (40-125)||(29793742-29793827)
chr1 (82-139)||(38116089-38116146)
chr1 (37-158)||(39777620-39777741)
chr1 (23-91)||(7273998-7274065)
chr1 (37-89)||(15360851-15360903)
chr1 (37-93)||(49557098-49557154)
chr1 (42-125)||(4215334-4215417)
chr1 (38-125)||(18434503-18434590)
chr1 (87-126)||(21254771-21254810)
chr1 (43-126)||(30257646-30257729)
chr1 (23-86)||(45990122-45990184)
chr1 (43-126)||(49888730-49888813)
chr1 (43-126)||(51695519-51695601)
chr1 (82-160)||(3223670-3223747)
chr1 (43-125)||(5150900-5150982)
chr1 (41-115)||(5421955-5422029)
chr1 (43-153)||(12477284-12477394)
chr1 (75-153)||(27887115-27887193)
chr1 (59-153)||(28262616-28262709)
chr1 (68-126)||(28482257-28482315)
chr1 (64-122)||(33976163-33976221)
chr1 (37-123)||(34179899-34179985)
chr1 (56-126)||(40394910-40394979)
chr1 (57-126)||(4078173-4078242)
chr1 (37-158)||(6981449-6981570)
chr1 (37-126)||(7472269-7472357)
chr1 (41-98)||(10581129-10581186)
chr1 (40-153)||(21012750-21012863)
chr1 (80-153)||(27140478-27140551)
chr1 (28-105)||(36070199-36070275)
chr1 (42-111)||(37272625-37272694)
chr1 (44-121)||(48282098-48282175)
chr1 (75-123)||(11997053-11997101)
chr1 (37-73)||(14737782-14737818)
chr1 (41-125)||(18420879-18420963)
chr1 (37-160)||(30259476-30259600)
chr1 (86-126)||(38651455-38651495)
chr1 (81-117)||(47598454-47598490)
[»] chr5 (50 HSPs)
chr5 (43-160)||(10272421-10272538)
chr5 (37-126)||(37588384-37588473)
chr5 (37-152)||(37526197-37526312)
chr5 (37-151)||(10303758-10303867)
chr5 (37-114)||(14295463-14295540)
chr5 (56-153)||(41957448-41957545)
chr5 (42-126)||(9202772-9202856)
chr5 (37-153)||(36639479-36639595)
chr5 (37-152)||(37690634-37690750)
chr5 (37-164)||(12459987-12460113)
chr5 (42-125)||(26390815-26390897)
chr5 (56-153)||(18543194-18543291)
chr5 (28-126)||(42181116-42181213)
chr5 (33-125)||(12425524-12425616)
chr5 (68-128)||(16016455-16016515)
chr5 (37-117)||(18875318-18875398)
chr5 (56-115)||(9215900-9215959)
chr5 (56-126)||(31030154-31030224)
chr5 (39-117)||(38047888-38047966)
chr5 (75-164)||(2568653-2568742)
chr5 (28-93)||(4855647-4855711)
chr5 (37-126)||(28586790-28586879)
chr5 (37-161)||(34690831-34690954)
chr5 (37-117)||(12975304-12975384)
chr5 (76-116)||(17777905-17777945)
chr5 (42-114)||(36539708-36539780)
chr5 (41-93)||(40120081-40120133)
chr5 (44-108)||(41277392-41277456)
chr5 (37-92)||(2933709-2933764)
chr5 (65-164)||(13604835-13604934)
chr5 (59-126)||(41016158-41016225)
chr5 (40-118)||(6582864-6582942)
chr5 (56-126)||(7319382-7319452)
chr5 (82-160)||(10125708-10125786)
chr5 (38-124)||(15003540-15003626)
chr5 (80-126)||(15074773-15074819)
chr5 (40-126)||(32172613-32172699)
chr5 (32-126)||(34245676-34245770)
chr5 (56-126)||(39105440-39105510)
chr5 (37-119)||(42583106-42583188)
chr5 (37-119)||(42646872-42646954)
chr5 (20-69)||(11615449-11615497)
chr5 (37-91)||(14599362-14599418)
chr5 (80-117)||(32849181-32849218)
chr5 (33-98)||(39823173-39823238)
chr5 (62-126)||(6587131-6587195)
chr5 (56-148)||(8938622-8938714)
chr5 (45-126)||(19138741-19138824)
chr5 (40-100)||(19177439-19177499)
chr5 (82-126)||(40205098-40205142)
[»] chr3 (48 HSPs)
chr3 (29-126)||(1816532-1816629)
chr3 (37-126)||(1125790-1125880)
chr3 (48-126)||(14548745-14548823)
chr3 (56-153)||(1217797-1217894)
chr3 (37-153)||(45432936-45433052)
chr3 (37-126)||(237354-237443)
chr3 (23-126)||(2318587-2318691)
chr3 (37-126)||(24887307-24887396)
chr3 (20-125)||(36646407-36646511)
chr3 (37-94)||(48384479-48384536)
chr3 (33-125)||(22232779-22232871)
chr3 (40-108)||(32555023-32555091)
chr3 (37-93)||(48397603-48397659)
chr3 (37-125)||(54775085-54775172)
chr3 (75-126)||(40665424-40665475)
chr3 (38-93)||(48364936-48364991)
chr3 (56-126)||(21367643-21367713)
chr3 (80-126)||(51510217-51510263)
chr3 (85-126)||(8933792-8933833)
chr3 (37-98)||(10101528-10101589)
chr3 (37-98)||(10212453-10212514)
chr3 (33-122)||(20192634-20192723)
chr3 (40-125)||(31337426-31337511)
chr3 (37-122)||(52440690-52440775)
chr3 (56-125)||(52618979-52619048)
chr3 (41-148)||(21862177-21862285)
chr3 (56-116)||(43875624-43875684)
chr3 (37-93)||(51197793-51197848)
chr3 (38-153)||(40122750-40122864)
chr3 (56-150)||(16990161-16990255)
chr3 (75-125)||(24158528-24158578)
chr3 (87-153)||(24785212-24785278)
chr3 (37-115)||(28306115-28306193)
chr3 (30-117)||(33965522-33965611)
chr3 (43-125)||(39602235-39602316)
chr3 (37-126)||(14145869-14145958)
chr3 (65-126)||(20502092-20502153)
chr3 (45-126)||(23315591-23315672)
chr3 (68-125)||(24280699-24280756)
chr3 (75-160)||(34382937-34383022)
chr3 (105-170)||(41633385-41633450)
chr3 (75-115)||(2100190-2100230)
chr3 (42-126)||(2719431-2719514)
chr3 (82-126)||(2825149-2825193)
chr3 (65-125)||(3044284-3044344)
chr3 (80-152)||(20669172-20669244)
chr3 (80-124)||(22203430-22203474)
chr3 (39-87)||(26599137-26599185)
[»] scaffold0092 (1 HSPs)
scaffold0092 (33-120)||(40184-40271)
[»] scaffold0654 (1 HSPs)
scaffold0654 (37-125)||(6662-6750)
[»] scaffold0049 (1 HSPs)
scaffold0049 (33-93)||(58150-58210)
[»] scaffold0024 (1 HSPs)
scaffold0024 (37-93)||(27533-27589)
[»] scaffold0014 (1 HSPs)
scaffold0014 (37-125)||(116581-116669)


Alignment Details
Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 19 - 254
Target Start/End: Original strand, 34551059 - 34551294
Alignment:
Q  19 tatatatatgctattttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatga 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34551059 tatatatatgctattttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatga 34551158  T
Q  119 aaataagcgagcaacaacttattgacatgtcataatttgttttcatcacctcagatagactcacaagtgtttatgccagtgaattagctaaaataagtca 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34551159 aaataagcgagcaacaacttattgacatgtcataatttgttttcatcacctcagatagactcacaagtgtttatgccagtgaattagctaaaataagtca 34551258  T
Q  219 attcaatcagggcctatatctggtttagactgtgtg 254  Q
    ||||||||||||||||||||||||||||||||||||    
T  34551259 attcaatcagggcctatatctggtttagactgtgtg 34551294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 41 - 111
Target Start/End: Original strand, 34770853 - 34770923
Alignment:
Q  41 acaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagag 111  Q
    ||||||||||| || ||||||||||||||||||||||| |||||||||||||| |||| |||||| |||||    
T  34770853 acaaaagataaaataaagtcaaattgttttcatttaagctataagttgttttcataagctatcctagagag 34770923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 126
Target Start/End: Original strand, 31862451 - 31862539
Alignment:
Q  38 ataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||||||||| || |||||||| | || || | |||| |||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  31862451 ataacaaaagataatataaagtcaaactattctcgtataagctataagatgttttcataagttatcctagagagcttatgaaaataagc 31862539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 12361156 - 12361237
Alignment:
Q  44 aaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||||||| || |||||||||||||||||| |||| |||||| ||||||| |||||||| | |||||||| ||| |||||||    
T  12361156 aaagataaaatgaagtcaaattgttttcatataagctataagctgttttcataagttattcaggagagctaatggaaataag 12361237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 148
Target Start/End: Complemental strand, 26284889 - 26284797
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgt 148  Q
    |||||||| ||||||||| |||  || ||||||||||| |||||||||||| | |||||||||||||||||    |||||||||| |||||||    
T  26284889 aagtcaaactgttttcatataaagtacaagttgttttcgtaagttatcctgtatagcttatgaaaataagctgaaaacaacttatagacatgt 26284797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 43709249 - 43709316
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaata 123  Q
    ||||||||| |||||||  |||| |||||||||||||| | || ||||||||||||||||||||||||    
T  43709249 aagtcaaatggttttcacgtaagctataagttgttttcatgagctatcctggagagcttatgaaaata 43709316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 229
Target Start/End: Original strand, 9699959 - 9700154
Alignment:
Q  38 ataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaact 137  Q
    |||||||||| ||| || | |||||||||||||||  ||| ||||||| ||||||| || ||||| |  |||||||||||||||||||     |||| ||    
T  9699959 ataacaaaagttaaaataaggtcaaattgttttcaaataaattataagctgttttcatatgttattcaagagagcttatgaaaataaggtgaaaacagct 9700058  T
Q  138 tattgacatgtcataatttgttttcatca----cctcagatagactcacaagtgtttatgccagtgaattagctaaaataagtcaattcaatcagg 229  Q
    ||| |||||||||||| ||| |||||  |     |||| |||| ||||||||||||||||| |||  || |||| |||||||| ||| ||| ||||    
T  9700059 tatggacatgtcataaattgatttcacaagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 9700154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 29699211 - 29699298
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||||||||| || |||||||| |||| |||| ||||||||||| |||||||  |||||||| |  ||||||||||||| |||||    
T  29699211 tataacaaaagataaaataaagtcaaaatgttgtcatctaagttataagctgttttc--aagttatcgtatagagcttatgaaattaagc 29699298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 7645955 - 7646024
Alignment:
Q  57 agtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||||||||||| |||| |||||||||||||| |||| || |||| | |||||||| ||||||||    
T  7645955 agtcaaattgttttcatgtaagctataagttgttttcataagctaacctgtaaagcttatggaaataagc 7646024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 160
Target Start/End: Complemental strand, 41620402 - 41620281
Alignment:
Q  39 taacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaactt 138  Q
    ||||||||||||| || |||||||||| | ||||| ||   || ||| ||||||  |||| |||| ||  |||||| ||||||||||||   ||||||||    
T  41620402 taacaaaagataaaataaagtcaaattatgttcatatattctaaaagctgtttttataagctatcttgtcgagcttttgaaaataagcggaaaacaactt 41620303  T
Q  139 attgacatgtcataatttgttt 160  Q
    || |||||||||||||||||||    
T  41620302 atggacatgtcataatttgttt 41620281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 125
Target Start/End: Complemental strand, 6509408 - 6509328
Alignment:
Q  45 aagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||||| || |||||||||||| || || |||| |||||| ||||||| |||| |||||||||||||||||  |||||||    
T  6509408 aagataaaataaagtcaaattgtatttatataagctataagctgttttcataagctatcctggagagcttattgaaataag 6509328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 31915382 - 31915302
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatg 117  Q
    ||||||||||||||  || ||||||||||||||||||  ||| |||||| ||| ||  |||| ||||||||||||||||||    
T  31915382 tataacaaaagatagaataaagtcaaattgttttcatacaaggtataagatgtctttgtaagctatcctggagagcttatg 31915302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 100
Target Start/End: Original strand, 38260508 - 38260552
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagtt 100  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||    
T  38260508 aagttaaactgttttcatttaagttataagttgttttcttaagtt 38260552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 26473860 - 26473777
Alignment:
Q  43 aaaagataacatcaagtcaaattgtttt-catttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||||||| || || |||| ||||||| ||| | |||| |||||||||||| |||| |||||| |||||||||||||||||||    
T  26473860 aaaagataaaataaattcaagttgtttttcatatgagttgtaagttgttttcataagctatcctagagagcttatgaaaataag 26473777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 124
Target Start/End: Complemental strand, 37353361 - 37353275
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataa 124  Q
    ||||||||||||||| || |||| ||||||||||  | || | |||||| |||||||||||| |||| | ||||||||||||||||||    
T  37353361 tataacaaaagataa-ataaagttaaattgtttttgtgtatgctataagctgttttcttaagctatctttgagagcttatgaaaataa 37353275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 8062500 - 8062570
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||||||||||||| |||| |||||| |||| || |||| |||| | ||||| ||||||||||||||    
T  8062500 aagtcaaattgttttcatataagctataagatgttctcataagctatcttagagagtttatgaaaataagc 8062570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 10075645 - 10075575
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||| | |||| || ||||||||||| | ||||| |||| |||||| ||||||||||||||||||||    
T  10075645 aagtcaaactatttttatataagttataagctattttcataagctatcctagagagcttatgaaaataagc 10075575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 160
Target Start/End: Complemental strand, 39551321 - 39551199
Alignment:
Q  38 ataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaact 137  Q
    |||| ||||||||| || |||  ||| ||| |||||  ||| |||||||||||||| |||| | ||||||||||||||| ||||||||  |  |||| ||    
T  39551321 ataataaaagataaaataaagctaaactgtcttcatacaagctataagttgttttcataagctttcctggagagcttataaaaataagttaaaaacagct 39551222  T
Q  138 tattgacatgtcataatttgttt 160  Q
    | | |||||||||||| ||||||    
T  39551221 tttggacatgtcataagttgttt 39551199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 13652191 - 13652260
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||| ||||||||||||| |||||||||| |||||||  |||| ||| |||||||||||| | |||||||    
T  13652191 aagtgaaattgttttcatataagttataaattgtttttataagctattctggagagcttaaggaaataag 13652260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 13710834 - 13710903
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||| ||||||||||||| |||||||||| |||||||  |||| ||| |||||||||||| | |||||||    
T  13710834 aagtgaaattgttttcatataagttataaattgtttttataagctattctggagagcttaaggaaataag 13710903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 42597358 - 42597419
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaag 98  Q
    ||||||||||||||| || |||| |||||||||||||  ||| |||||||||||||| ||||    
T  42597358 tataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttgttttcataag 42597419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 45099048 - 45098999
Alignment:
Q  75 taagttataagttgttttcttaagttatcctggagagcttatgaaaataa 124  Q
    ||||||||||||||||||| || ||| ||||||||||||||| |||||||    
T  45099048 taagttataagttgttttcataggttttcctggagagcttataaaaataa 45098999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 2093237 - 2093305
Alignment:
Q  38 ataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctg 106  Q
    |||| ||||||||| || ||||||||| |||||| |||||| |||||||||||||| | || |||||||    
T  2093237 ataataaaagataaaataaagtcaaatggttttcttttaagctataagttgttttcattagctatcctg 2093305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 145
Target Start/End: Original strand, 4558755 - 4558863
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaac 136  Q
    ||||| ||||||||| || |||| ||||| ||||||| || | |||||| ||||| | |||| |||||| ||||||||||| |||||| | |  ||||||    
T  4558755 tataataaaagataaaataaagttaaattattttcatatatgctataagctgtttccataagctatcctagagagcttatggaaataaactaaaaacaac 4558854  T
Q  137 ttattgaca 145  Q
    |||| ||||    
T  4558855 ttatagaca 4558863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 30628013 - 30627929
Alignment:
Q  39 taacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaata 123  Q
    ||||||||||||| || || | |||||||||   | |||| |||||||||||||| ||||||||| | ||||||||||| |||||    
T  30628013 taacaaaagataaaataaaataaaattgtttatgtgtaagctataagttgttttcataagttatcttagagagcttatggaaata 30627929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 114
Target Start/End: Complemental strand, 6864562 - 6864495
Alignment:
Q  47 gataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagctt 114  Q
    ||||| || |||||||| | ||||||| ||||||||||||||||||| |||| |||  ||||||||||    
T  6864562 gataaaataaagtcaaactattttcatgtaagttataagttgttttcataagctattttggagagctt 6864495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 126
Target Start/End: Complemental strand, 9956889 - 9956838
Alignment:
Q  75 taagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||||||||||||| |||  |||| |||||| |||||||||||||||    
T  9956889 taagttataagttgttttcataatctatcttggagaacttatgaaaataagc 9956838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 38874605 - 38874692
Alignment:
Q  39 taacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||| |||||||| ||| ||||||||| ||||||| |||| | |||| ||||||| |||| |||  |||||| | |||||||||||||    
T  38874605 taactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggagaacatatgaaaataagc 38874692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 1433535 - 1433593
Alignment:
Q  67 ttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||| ||||||| | ||||  |||||| |||| ||||||||||||||||||||||||||    
T  1433535 tttttatttaagctttaagcagttttcataagctatcctggagagcttatgaaaataag 1433593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 11415130 - 11415200
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||||| |||| || ||||||||| | ||||||| |||| |||||| ||||| || |||||||||||    
T  11415130 aagtcaaattatttttatataagttatacgctgttttcataagctatcctagagagtttgtgaaaataagc 11415200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 11795068 - 11795138
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||| | ||||||||| ||||||||||| || |||| |||| |||  ||||||||||||| ||||||||    
T  11795068 aagtcacactgttttcatataagttataagctgatttcataagctattatggagagcttatggaaataagc 11795138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 126
Target Start/End: Original strand, 27028831 - 27028877
Alignment:
Q  80 tataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||| ||||||| |||| |||| ||||||||||||||||||||||    
T  27028831 tataagctgttttcataagctatcttggagagcttatgaaaataagc 27028877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 31884551 - 31884625
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagag 111  Q
    |||||||||| |||| ||||| |  |||||||||||| |||| ||||| |||||||| |||| |||| |||||||    
T  31884551 tataacaaaatataaaatcaaattgaattgttttcatataagctataaattgttttcataagctatcatggagag 31884625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 787217 - 787144
Alignment:
Q  39 taacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagc 112  Q
    ||||| ||||||| || ||||||||||||| |||| |||| |||||  ||||||| ||||||||| || |||||    
T  787217 taacataagataaaataaagtcaaattgttatcatataagctataaactgttttcataagttatcttgaagagc 787144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 13561406 - 13561345
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatg 117  Q
    |||||||||||||||||| ||| |||||| ||||||||  ||| |||| | |||||||||||    
T  13561406 aagtcaaattgttttcatataaattataacttgttttcacaagctatcattgagagcttatg 13561345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 126
Target Start/End: Original strand, 21653034 - 21653127
Alignment:
Q  33 tttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||| ||||||||||||| || |||| |||||| |||| | || | || || ||| |||| | || |||| ||||||||||||||||||||||    
T  21653034 tttatgtaacaaaagataaaataaagttaaattgatttcgtgtaggctacaaattgctttcattagctatcttggagagcttatgaaaataagc 21653127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 29973040 - 29973125
Alignment:
Q  39 taacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataa 124  Q
    ||||| ||| ||| || |||||||| | ||||||  |||| |||||||||||||| |||| |||||| ||||| ||||| ||||||    
T  29973040 taacacaaggtaaaataaagtcaaactattttcacataagctataagttgttttcataagctatccttgagagtttatggaaataa 29973125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 30013175 - 30013264
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||||| | | || |||||||| ||||| ||| |||| |||||| ||||||| |||| ||||||| ||| || ||| ||||||||    
T  30013175 tataacaaaaggtcaaattaagtcaaactgtttccatataagctataagctgttttcataagctatcctgtagaactaatggaaataagc 30013264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 39561654 - 39561565
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||||  |||| || ||||| | |||||||||| |||  |||||||||||||| |||| |||| || | |||||||| ||||||||    
T  39561654 tataacaaagtataaaataaagtcgatttgttttcatctaaactataagttgttttcgtaagctatcatgaaaagcttatggaaataagc 39561565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 153
Target Start/End: Original strand, 40157488 - 40157585
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataa 153  Q
    |||| ||| |||||| || |||| |||||| ||||||| || ||||| | ||||||||| ||||||||||| |   |||||||||| |||| ||||||    
T  40157488 aagttaaactgttttaatataagctataagatgttttcatatgttattccggagagcttgtgaaaataagctaaagacaacttattcacatatcataa 40157585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 778354 - 778434
Alignment:
Q  45 aagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||||| || |||| ||||||||||||||| || |||||| ||||||| ||||   |  |||||||||||||||| ||||    
T  778354 aagataaaataaagttaaattgttttcattttagctataagctgttttcataagcattgttggagagcttatgaaagtaag 778434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 3537144 - 3537053
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttc--ttaagttatcctggagagcttatgaaaataagc 126  Q
    |||| |||||||||| || |||||||||||||||| | |||| |||| |||||| ||   |||| |||| |||||| |||||| ||||||||    
T  3537144 tatagcaaaagataaaataaagtcaaattgttttcgtataagctataggttgttatcatataagatatcttggagaacttatggaaataagc 3537053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 7026688 - 7026736
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataag 85  Q
    ||||||||||||||| || |||| ||||||||||||| |||| ||||||    
T  7026688 tataacaaaagataaaataaagtaaaattgttttcatataaggtataag 7026736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 121
Target Start/End: Original strand, 25097387 - 25097427
Alignment:
Q  81 ataagttgttttcttaagttatcctggagagcttatgaaaa 121  Q
    ||||| ||||||| |||| ||||||||||||||||||||||    
T  25097387 ataagctgttttcataagctatcctggagagcttatgaaaa 25097427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 37822775 - 37822683
Alignment:
Q  33 tttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||||||||||||| ||||  | || ||||| ||||| ||| |||| |||||| |||||    |||||||| || ||||||||||||||||||    
T  37822775 tttatataacaaaaaataaattaaattcaaactgtttacatataagatataagctgtttatagaagttatcttgaagagcttatgaaaataag 37822683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 42237540 - 42237488
Alignment:
Q  32 ttttatataacaaaagataacatcaagtcaaattgttttcatttaagttataa 84  Q
    |||| ||||||||||||||| || |||| ||||||||||||| |||| |||||    
T  42237540 ttttttataacaaaagataaaataaagttaaattgttttcatataagctataa 42237488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 30456560 - 30456476
Alignment:
Q  40 aacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataa 124  Q
    |||||||||||| || |||||||||||||||||| |||||||||||| |||||| |||  |||| ||||||||||||||||||||    
T  30456560 aacaaaagataaaataaagtcaaattgttttcatataagttataagtggttttcataaactatcttggagagcttatgaaaataa 30456476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 29363478 - 29363562
Alignment:
Q  40 aacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataa 124  Q
    |||| ||||||| || |||||||| ||||||||| | ||||||||| |||| || ||||||||||||||||||||||| ||||||    
T  29363478 aacagaagataaaataaagtcaaactgttttcatattagttataagctgttatcataagttatcctggagagcttatggaaataa 29363562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 111
Target Start/End: Original strand, 1417217 - 1417295
Alignment:
Q  33 tttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagag 111  Q
    ||||||||||||||||||| || |||||||||||||||||| ||||  ||||||||||||| |||| || | |||||||    
T  1417217 tttatataacaaaagataaaataaagtcaaattgttttcatataagcaataagttgttttcataagctagcatggagag 1417295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 164
Target Start/End: Original strand, 46082019 - 46082120
Alignment:
Q  65 tgttttcatttaagttataagttgttttctt--aagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataatttgttttc 162  Q
    ||||||||| ||||||||||||||||||| |  | | ||| |||||||||||||||||||||||    |||||||||| | |||||||||| ||||||||    
T  46082019 tgttttcatataagttataagttgttttcatagacgctattctggagagcttatgaaaataagctgaaaacaacttatggtcatgtcataagttgttttc 46082118  T
Q  163 at 164  Q
    ||    
T  46082119 at 46082120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 28340970 - 28340878
Alignment:
Q  23 tatatgctattttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttat 116  Q
    ||||||||||||| ||||| ||||||| | || ||||||||||||| |||| |||| |||||| ||||||| |||| |||||| ||||||||||    
T  28340970 tatatgctatttt-tataataaaagatgaaatgaagtcaaattgttgtcatataagctataagctgttttcataagctatcctagagagcttat 28340878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 164
Target Start/End: Complemental strand, 46104642 - 46104553
Alignment:
Q  75 taagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataatttgttttcat 164  Q
    |||| |||||||||||||| |||| ||| ||| |||||||||||||||||||  | ||||  ||||||||||||||| | ||||||||||    
T  46104642 taagctataagttgttttcataagctatgctgaagagcttatgaaaataagctggaaacattttattgacatgtcatgagttgttttcat 46104553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 146
Target Start/End: Original strand, 27548225 - 27548329
Alignment:
Q  42 caaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttatt 141  Q
    |||||||||| || ||||| ||||||||||||||||| |||||| ||||||| |||| |||| |||| | |||||| | ||||||  | || ||||||||    
T  27548225 caaaagataaaataaagtctaattgttttcatttaagctataagctgttttcataagctatcttggataacttatggagataagctggaaaaaacttatt 27548324  T
Q  142 gacat 146  Q
    |||||    
T  27548325 gacat 27548329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 124
Target Start/End: Complemental strand, 17989136 - 17989049
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataa 124  Q
    |||||||||| |||| || |||||||| ||||||||| |||  ||||| |||||||| |||| | ||||| |||||||||||||||||    
T  17989136 tataacaaaatataaaataaagtcaaactgttttcatataaactataatttgttttcataagctctcctgaagagcttatgaaaataa 17989049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 5006622 - 5006548
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagag 111  Q
    ||||||||||||||| || |||||||| ||||||||| |||| ||||| |||||||| |||| || |||||||||    
T  5006622 tataacaaaagataaaataaagtcaaactgttttcatataaggtataaattgttttcataagctaccctggagag 5006548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 162
Target Start/End: Complemental strand, 5628687 - 5628555
Alignment:
Q  28 gctattttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcg 127  Q
    |||||||| ||||||||| ||||| ||  |||  || |||||||||||||| |||||| ||||||| |||| ||||   ||||||||||||||||||||     
T  5628687 gctatttt-tataacaaatgataaaatagagttgaactgttttcatttaagatataagctgttttcataagatatcacagagagcttatgaaaataagc- 5628590  T
Q  128 agcaacaacttattgacatgtcataatttgttttc 162  Q
     | |||| ||||| ||||||||||||  |||||||    
T  5628589 tgaaacagcttatagacatgtcataaactgttttc 5628555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 39542375 - 39542325
Alignment:
Q  75 taagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||| |||||||||||| | |||||||||||||||||||||||||||||||    
T  39542375 taagatataagttgtttccataagttatcctggagagcttatgaaaataag 39542325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 146
Target Start/End: Original strand, 44821935 - 44822025
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacat 146  Q
    |||||||||||||||  | ||||||||||| ||||||| |||| ||| ||||||| ||||||||||||||     ||||||||||||||||    
T  44821935 aagtcaaattgtttttgtataagttataagctgttttcataagctattctggagaacttatgaaaataagttgaaaacaacttattgacat 44822025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 28340490 - 28340429
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatg 117  Q
    |||||||| ||||||||| |||||||||||||||||||  ||| ||| ||||||||||||||    
T  28340490 aagtcaaactgttttcatgtaagttataagttgttttcagaagctatgctggagagcttatg 28340429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 40689099 - 40689010
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||| |||||||||| || |||| ||||| ||||||| |||| |||||| ||| ||| |||| ||||||||| | |||||||||||||||    
T  40689099 tatagcaaaagataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctggataacttatgaaaataagc 40689010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 24363673 - 24363601
Alignment:
Q  78 gttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtca 150  Q
    |||||||||||||||| |||| |||||||||||| ||||| ||||||||    |||||||||| |||||||||    
T  24363673 gttataagttgttttcataagctatcctggagaggttatggaaataagctgaaaacaacttatggacatgtca 24363601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 28165048 - 28165136
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||||||||||||| || ||||||||||||||| || |||| |||||  ||| ||  |||| |||| ||||||||||||| |||||||    
T  28165048 tataacaaaagataaaatgaagtcaaattgttttaatataagctataaactgtctttataagctatcatggagagcttatggaaataag 28165136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 21453253 - 21453340
Alignment:
Q  39 taacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||||||| || ||||||| ||||| |||| |||| |||||  ||||||| |||| |||||| ||||||| ||||| ||||||    
T  21453253 taacaaaagataagataaagtcaagttgttctcatataagctataaactgttttcataagctatcctagagagctaatgaagataagc 21453340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 22759143 - 22759230
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataa 124  Q
    ||||||||||||||| || |||  ||||||||||||| |||| || ||| || |||| |||| ||||| |||||||||||| ||||||    
T  22759143 tataacaaaagataaaataaaggaaaattgttttcatataagctaaaagctgatttcataagctatccaggagagcttatggaaataa 22759230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 40439036 - 40439099
Alignment:
Q  62 aattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||||||||||| || |||||||||||||||| | || ||||||| |||||||||| |||||||    
T  40439036 aattgttttcatatatgttataagttgttttcattagctatcctgaagagcttatggaaataag 40439099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 45777287 - 45777228
Alignment:
Q  34 ttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttc 93  Q
    |||||||||||||||||| || |||||||| ||||||||| |||  ||||||||||||||    
T  45777287 ttatataacaaaagataaaattaagtcaaactgttttcatataaactataagttgttttc 45777228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 119
Target Start/End: Complemental strand, 18350796 - 18350738
Alignment:
Q  61 aaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaa 119  Q
    ||||||||||| | ||||||||||| ||||||| |||| |||| |||||||||||||||    
T  18350796 aaattgttttcgtataagttataagctgttttcataagctatcatggagagcttatgaa 18350738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 31338471 - 31338553
Alignment:
Q  43 aaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||||||| || |||||||| |||||| || ||||||||||||||||| | |||  ||||||   |||||||||||||||||    
T  31338471 aaaagataaaataaagtcaaactgtttttatataagttataagttgtttccataaactatcctatggagcttatgaaaataag 31338553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 38010674 - 38010760
Alignment:
Q  40 aacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||||||| |  ||| |||||||||||||| |||| |||||| ||||||| |||  |||||| |||| |||||| ||||||||    
T  38010674 aacaaaagataaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagc 38010760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 5569725 - 5569661
Alignment:
Q  61 aaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||||||||  | ||||||||||||||||||| ||||||||| || ||| || |||||||||||    
T  5569725 aaattgttttggtataagttataagttgttttcataagttatcttgaagaactaatgaaaataag 5569661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 32730361 - 32730289
Alignment:
Q  40 aacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagc 112  Q
    |||||||||||| ||||| ||||||||||||| | ||| | ||||| ||||||| ||||||||| || |||||    
T  32730361 aacaaaagataaaatcaaatcaaattgttttcgtataactgataagctgttttcataagttatcatgtagagc 32730289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 35536064 - 35536112
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataag 85  Q
    ||||||| ||||||| || |||||||||||||||||| |||||||||||    
T  35536064 tataacataagataaaataaagtcaaattgttttcatataagttataag 35536112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 48917414 - 48917370
Alignment:
Q  82 taagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||||||| |||| |||| ||||||||||||||||||||||    
T  48917414 taagttgttttcataagctatcttggagagcttatgaaaataagc 48917370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 529459 - 529514
Alignment:
Q  173 atagactcacaagtgtttatgccagtgaattagctaaaataagtcaattcaatcag 228  Q
    |||| |||||||||||||||||||||  || |||| |||||||||||| |||||||    
T  529459 atagcctcacaagtgtttatgccagtagataagctcaaataagtcaatccaatcag 529514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 946715 - 946778
Alignment:
Q  43 aaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctg 106  Q
    ||||||||| || |||||||||||||||| | | ||||||||||||||||  | ||||||||||    
T  946715 aaaagataaaataaagtcaaattgttttcgtattagttataagttgtttttgtgagttatcctg 946778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 12110325 - 12110404
Alignment:
Q  45 aagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataa 124  Q
    ||||||| || |||||||||||||||  | |||| |||||| ||||||| |||| |||| || ||| |||||||||||||    
T  12110325 aagataaaataaagtcaaattgttttggtataagctataagctgttttcataagctatcttgaagaacttatgaaaataa 12110404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 24895332 - 24895399
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaata 123  Q
    |||||||||| ||||||| |||| ||||||||||||||  ||| |||  ||||||||||||| |||||    
T  24895332 aagtcaaattattttcatataagctataagttgttttcacaagatattgtggagagcttatggaaata 24895399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 24909640 - 24909707
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaata 123  Q
    |||||||||| ||||||| |||| |||||||||||||| |||| |||  |||||||||| || |||||    
T  24909640 aagtcaaattattttcatataagctataagttgttttcataagatattgtggagagcttgtggaaata 24909707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 164
Target Start/End: Complemental strand, 25670671 - 25670572
Alignment:
Q  65 tgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataatttgttttcat 164  Q
    ||||||||| |||| ||| | |||||||  |||  |||| |||||||||| |||||||||||    ||||| ||||| ||||||||||| ||||||||||    
T  25670671 tgttttcatataagctatcaattgtttttataacatatcttggagagcttgtgaaaataagctgaaaacaatttattaacatgtcataagttgttttcat 25670572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 39591580 - 39591537
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagtt 80  Q
    ||||||||||||||| || |||||||||||||||||| ||||||    
T  39591580 tataacaaaagataaaataaagtcaaattgttttcatataagtt 39591537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 44151592 - 44151477
Alignment:
Q  38 ataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaact 137  Q
    |||||||||||||  || |||| ||| ||||| ||| |||| |||||||||||||| |||  |||| || | |||||||| ||||||||    |||| ||    
T  44151592 ataacaaaagatagaataaagtaaaactgtttccatataagctataagttgttttcataaactatcttgaaaagcttatggaaataagctgaaaacatct 44151493  T
Q  138 tattgacatgtcataa 153  Q
    ||| ||||||||||||    
T  44151492 tatggacatgtcataa 44151477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 3610850 - 3610764
Alignment:
Q  40 aacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||||||| || ||| |||| ||||||  | |||| |||||||||||||| |||  |||||| ||||||||||  ||||||||    
T  3610850 aacaaaagataaaatgaaggcaaactgttttggtataagctataagttgttttcgtaaactatcctagagagcttatagaaataagc 3610764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 160
Target Start/End: Complemental strand, 33646036 - 33645951
Alignment:
Q  74 ttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataatttgttt 160  Q
    ||||| |||||  ||||||| |||| |||| ||||||||||||| |||||| | |  |||||||||| |||||||||||| ||||||    
T  33646036 ttaagctataaactgttttcataagctatc-tggagagcttatggaaataacctaaaaacaacttatagacatgtcataagttgttt 33645951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 46825055 - 46825145
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatga-aaataagc 126  Q
    ||||| ||||||||| || |||||||||||||||||| ||||  ||||   |||||| |||| |||| ||||| |||||||| ||||||||    
T  46825055 tataaaaaaagataaaataaagtcaaattgttttcatataagccataaaccgttttcataagctatcttggagtgcttatgagaaataagc 46825145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 47177612 - 47177682
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||| ||||||||||||| |||| |||||| |||||||  ||| |||| ||||||  ||||||||||||||    
T  47177612 aagttaaattgttttcatataagctataagctgttttcaaaagctatcttggagaatttatgaaaataagc 47177682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 5272937 - 5272892
Alignment:
Q  33 tttatataacaaaagataacatcaagtcaaattgttttcatttaag 78  Q
    ||||||||||||||||||| || |||||| ||||||||||| ||||    
T  5272937 tttatataacaaaagataaaattaagtcacattgttttcatataag 5272892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 9527203 - 9527142
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaag 98  Q
    ||||||||||||||  || |||||||| ||||||||| |||  |||||||||||||| ||||    
T  9527203 tataacaaaagatataataaagtcaaactgttttcatataaactataagttgttttcataag 9527142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 28691910 - 28691861
Alignment:
Q  75 taagttataagttgttttcttaagttatcctggagagcttatgaaaataa 124  Q
    |||||||||  |||||||| |||| ||||||||||| |||||||||||||    
T  28691910 taagttatacattgttttcataagctatcctggagatcttatgaaaataa 28691861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 30812129 - 30812194
Alignment:
Q  61 aaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||||| | |||| |||||| ||||||| | || |||| ||||||||||||| ||||||||    
T  30812129 aaattgttttcgtataagctataagctgttttcattagctatcatggagagcttatggaaataagc 30812194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 170
Target Start/End: Complemental strand, 39551661 - 39551528
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaac 136  Q
    ||||||||||||||   | |||| ||| ||||||||| |||| |||||  | ||||| ||| || ||  ||| |||||||| ||||||||   ||||| |    
T  39551661 tataacaaaagatatactaaagtaaaactgttttcatataagctataatctattttcataacttctctaggaaagcttatggaaataagctgacaacacc 39551562  T
Q  137 ttattgacatgtcataatttgttttcatcacctc 170  Q
    |||| |||||||||||| |||||| ||| |||||    
T  39551561 ttatggacatgtcataagttgtttccataacctc 39551528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 153
Target Start/End: Complemental strand, 6263452 - 6263361
Alignment:
Q  61 aaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataa 153  Q
    |||| |||||||| ||||||||||| || |||| |||| |||  |||||||| |||| |||||||| |  |||||||||| ||||| ||||||    
T  6263452 aaatggttttcatataagttataagctgatttcataagctattatggagagcatatggaaataagcta-aaacaacttatggacatctcataa 6263361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 30723113 - 30723065
Alignment:
Q  76 aagttataagttgttttcttaagttatcctggagagcttatgaaaataa 124  Q
    |||||||||| | ||||| |||| ||||||||||||||| |||||||||    
T  30723113 aagttataagctattttcataagctatcctggagagcttttgaaaataa 30723065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 152
Target Start/End: Original strand, 33894580 - 33894699
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgtttt-----cttaagttatcctggagagcttatgaaaataagcgagca 131  Q
    ||||||||||||||| || |||||||| ||||||||| |||| | || ||||||||     |||||| ||||||||| || ||||  ||||||||    |    
T  33894580 tataacaaaagataaaat-aagtcaaactgttttcatataagctttatgttgtttttacaacttaagctatcctggaaagtttattgaaataagctgaaa 33894678  T
Q  132 acaacttattgacatgtcata 152  Q
    ||||||||| |||||||||||    
T  33894679 acaacttatggacatgtcata 33894699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 40252179 - 40252131
Alignment:
Q  78 gttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||| | ||||| ||||||||| |||||| |||||||||||||||    
T  40252179 gttataagctcttttcataagttatcttggagaacttatgaaaataagc 40252131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 45813293 - 45813237
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttc 93  Q
    |||| |||||||||| || ||||||| |||||||||| |||  ||||||||||||||    
T  45813293 tataccaaaagataaaataaagtcaacttgttttcatataatctataagttgttttc 45813237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 47046218 - 47046134
Alignment:
Q  40 aacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataa 124  Q
    |||||| ||||| || |||||||||||||||||| |||| |   |||||||||| |||| |||||| ||||  |||| |||||||    
T  47046218 aacaaaggataaaataaagtcaaattgttttcatataagctccgagttgttttcataagctatcctagagaaattataaaaataa 47046134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 10192241 - 10192328
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||||||||||||  || |||||||||||||||||| |||||||||||||||||||  ||| ||||||||||||| ||||||||||||    
T  10192241 tataacaaaagatagaataaagtcaaattgttttcatataagttataagttgttttcaaaagctatcctggagagc-tatgaaaataag 10192328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 38 - 164
Target Start/End: Original strand, 2996531 - 2996657
Alignment:
Q  38 ataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaact 137  Q
    |||||| ||||||| ||  |||||||||||||| || ||||||||||||||||||| |||| |||| |||||||| ||||||||||||     || | ||    
T  2996531 ataacataagataaaatacagtcaaattgtttttatataagttataagttgttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagct 2996630  T
Q  138 tattgacatgtcataatttgttttcat 164  Q
    ||| |||||||||||| ||||||||||    
T  2996631 tatggacatgtcataagttgttttcat 2996657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 36722754 - 36722693
Alignment:
Q  65 tgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||| ||||||||||||||||||  |||||||||||| |||||||||||||||||||    
T  36722754 tgttttcatataagttataagttgttttgataagttatcctgaagagcttatgaaaataagc 36722693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 52735081 - 52735168
Alignment:
Q  39 taacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||||||| || ||||||||||  |||||| ||||||||| ||||||||| |||| |||| || |||||||||| ||||||||    
T  52735081 taacaaaagataaaataaagtcaaattactttcatataagttatatgttgttttcgtaagctatcttgaagagcttatggaaataagc 52735168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 122
Target Start/End: Original strand, 17884025 - 17884110
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaat 122  Q
    ||||||||||||||| || |||| ||||||||||  | |||||||| |||||||||| |||| |||  ||||||||||||||||||    
T  17884025 tataacaaaagataaaataaagttaaattgtttttgtataagttatcagttgttttcataagctatattggagagcttatgaaaat 17884110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 437559 - 437456
Alignment:
Q  23 tatatgctattttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaat 122  Q
    |||| |||||||| |||| |||||||||| || |||| ||||||| ||||| |||||| |||||||||||| |||| |||  | |||  |||||||||||    
T  437559 tataagctattttttatagcaaaagataaaataaagttaaattgtgttcatataagttttaagttgttttcataagctattttagaggccttatgaaaat 437460  T
Q  123 aagc 126  Q
    ||||    
T  437459 aagc 437456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 103
Target Start/End: Original strand, 927268 - 927315
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatc 103  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  927268 aagtcaaattgtttccatataagttataagttgttttcttaagttatc 927315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 43824262 - 43824329
Alignment:
Q  59 tcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||| ||||||| ||||||||||| | ||||| |||||||||||||| |||||||| ||||||||    
T  43824262 tcaaattcttttcatataagttataagcttttttcgtaagttatcctggaaagcttatggaaataagc 43824329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 27623592 - 27623676
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataag---ttgttttcttaagttatcctggagagcttatga 118  Q
    ||||||||||||||| || |||||||| | |||| || |||| ||||||   |||||||| ||||||||||||||||||||||||    
T  27623592 tataacaaaagataaaataaagtcaaactattttaatataagctataagaagttgttttcataagttatcctggagagcttatga 27623676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 42322000 - 42321935
Alignment:
Q  28 gctattttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttct 94  Q
    |||||||| ||||||||| ||||| || |||||||||||||||||| ||| ||||||||||||||||    
T  42322000 gctatttt-tataacaaatgataaaataaagtcaaattgttttcatataaattataagttgttttct 42321935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 3175908 - 3175977
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctg 106  Q
    |||| |||||||||| || |||||||||||||||||  ||||||||||| ||||||| |||| |||||||    
T  3175908 tatagcaaaagataaaataaagtcaaattgttttcaagtaagttataagctgttttcataagctatcctg 3175977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 11802491 - 11802580
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||||||||| || |||||||||| || |||  |||| || ||||||||||| |||| |||  |||||||||||||| |||||||    
T  11802491 tataacaaaagataaaataaagtcaaatttttctcacataagctacaagttgttttcataagctattatggagagcttatgagaataagc 11802580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 18628636 - 18628567
Alignment:
Q  57 agtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||| |||||| || ||||||||||  ||||||| ||||||||| ||||||||||||| ||||||||    
T  18628636 agtcaaactgtttttatataagttataaactgttttcataagttatcttggagagcttatggaaataagc 18628567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 18630638 - 18630722
Alignment:
Q  38 ataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaat 122  Q
    |||||||||||||| || ||||||| | |||||||| |||| ||||||||||||||  ||| |||||   |||||||||||||||    
T  18630638 ataacaaaagataaaataaagtcaattggttttcatataagctataagttgttttcacaagctatccaacagagcttatgaaaat 18630722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 49085942 - 49086026
Alignment:
Q  33 tttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatg 117  Q
    ||||||||||||||||||| || | |||||| | |||||||  |||||||||||||||||| |||| || | | |||||||||||    
T  49085942 tttatataacaaaagataaaataatgtcaaactattttcatacaagttataagttgttttcataagctaccttagagagcttatg 49086026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 151
Target Start/End: Complemental strand, 7694104 - 7694009
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcat 151  Q
    |||||||| ||||||  | |||| |||||| ||||||| ||||||||||||||||| ||||| ||||||||    ||||||||||  |||||||||    
T  7694104 aagtcaaactgtttttgtataagctataagctgttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaacatgtcat 7694009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 8468930 - 8468992
Alignment:
Q  62 aattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataa 124  Q
    |||| ||||||| |||| ||| |||||||||| |||||||| || ||||||||||||||||||    
T  8468930 aatttttttcatataagctattagttgttttcataagttattctagagagcttatgaaaataa 8468992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 25885816 - 25885882
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatc 103  Q
    |||| |||||||||| || |||| ||||||||||| | |||| |||||||||||||| |||||||||    
T  25885816 tatagcaaaagataaaataaagttaaattgttttcgtgtaagctataagttgttttcataagttatc 25885882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 46415904 - 46415790
Alignment:
Q  38 ataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaact 137  Q
    |||||||||||||| ||    ||||| |||||||||  |||||||||||| ||||| |||| |||||| |||||||||  ||||| |||    |||||||    
T  46415904 ataacaaaagataaaataggatcaaactgttttcatacaagttataagttcttttcataagctatcctcgagagcttagtaaaattagctgaaaacaact 46415805  T
Q  138 tattgacatgtcata 152  Q
    ||| |||||||||||    
T  46415804 tatggacatgtcata 46415790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 56480306 - 56480392
Alignment:
Q  38 ataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataa 124  Q
    ||||||||||| || || |||| |||||||||   | ||||||||||| ||||||| |||  |||| ||||||||||||||||||||    
T  56480306 ataacaaaagacaaaataaagttaaattgtttatgtataagttataagctgttttcataaactatcttggagagcttatgaaaataa 56480392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 4071839 - 4071892
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgtt 90  Q
    ||||||||||||||| || |||||||||| ||||||| |||| |||||||||||    
T  4071839 tataacaaaagataaaataaagtcaaattattttcatataagctataagttgtt 4071892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 8130131 - 8130192
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaag 98  Q
    |||||||||||||||||| |||||||||| ||||||| |||| |||||  ||||||| ||||    
T  8130131 tataacaaaagataacataaagtcaaattattttcatataagctataaactgttttcataag 8130192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 162
Target Start/End: Original strand, 23819066 - 23819171
Alignment:
Q  57 agtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataattt 156  Q
    ||||||| ||||||||| ||||||||||  ||||||| |||| |||| || |||||||||  |||||||     |||||||||| ||||||||||||  |    
T  23819066 agtcaaactgttttcatataagttataacatgttttcataagctatcttgaagagcttatagaaataagatgaaaacaacttatggacatgtcataagct 23819165  T
Q  157 gttttc 162  Q
    ||||||    
T  23819166 gttttc 23819171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 24929450 - 24929539
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||||||||| || ||||| || |||||||||  ||| |||||||||||||| |||  | | || ||||||||||| ||||||||    
T  24929450 tataacaaaagataaaataaagtctaactgttttcataaaagctataagttgttttcataaactctactagagagcttatggaaataagc 24929539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 29778776 - 29778841
Alignment:
Q  61 aaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||||||| |||| | |||||||||||| |||| || | || |||||||||||||||||||    
T  29778776 aaattgttttcatataagctgtaagttgttttcataagctaccttgaagagcttatgaaaataagc 29778841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 164
Target Start/End: Complemental strand, 33534236 - 33534155
Alignment:
Q  83 aagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataatttgttttcat 164  Q
    ||||||||||| ||| ||||  | ||||||||||||||||||||    |||||||||| || |||||| |||||||||||||    
T  33534236 aagttgttttcgtaaattatttttgagagcttatgaaaataagctgaaaacaacttatggatatgtcacaatttgttttcat 33534155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 49219096 - 49219185
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||||| |||| || |||||||||| ||||||| |||| |||||||||||||| |||  |||| |  |||| ||||| ||||||||    
T  49219096 tataacaaaatataaaataaagtcaaattattttcatataagctataagttgttttcataaactatcttaaagagattatggaaataagc 49219185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 126
Target Start/End: Original strand, 51630064 - 51630157
Alignment:
Q  33 tttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||| |||||||||| || |||| |||||||||| || |||| |||||| | ||||| |||| |||| || |||  ||||||||||||||    
T  51630064 tttatatagcaaaagataaaataaagttaaattgttttgatataagctataagctattttcataagctatcttgaagaatttatgaaaataagc 51630157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 8422963 - 8422863
Alignment:
Q  23 tatatgctattttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaat 122  Q
    |||| |||||||| ||||| ||||||||| || ||||||  |||||||||| |||| ||||||||||||||  ||  |||| ||||||| ||||| ||||    
T  8422963 tataagctatttt-tataaaaaaagataaaataaagtca--ttgttttcatataagctataagttgttttcacaatctatcttggagagtttatgcaaat 8422867  T
Q  123 aagc 126  Q
    ||||    
T  8422866 aagc 8422863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 153
Target Start/End: Original strand, 42685386 - 42685497
Alignment:
Q  42 caaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttatt 141  Q
    |||||||||| || |||| ||||||||||  | |||| | |||||||||||| |||| |||  |||||| | | ||||||||||| |  ||||||||||     
T  42685386 caaaagataaaatgaagttaaattgtttttttataagctctaagttgttttcataagctattttggagaacgtgtgaaaataagccaaaaacaacttata 42685485  T
Q  142 gacatgtcataa 153  Q
     |||||||||||    
T  42685486 aacatgtcataa 42685497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 42866047 - 42866114
Alignment:
Q  59 tcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||| |||||| || |||| |||||||||||||| |||| |||||| ||||||||||| || |||||    
T  42866047 tcaaactgtttttatataagctataagttgttttcataagctatccttgagagcttatggaagtaagc 42866114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 13949949 - 13949903
Alignment:
Q  45 aagataacatcaagtcaaattgttttcatttaagttataagttgttt 91  Q
    ||||||| || |||||||||||||||||| |||| ||||||||||||    
T  13949949 aagataaaataaagtcaaattgttttcatataagctataagttgttt 13949903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 17822935 - 17822889
Alignment:
Q  80 tataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||||||||| |||| |||| |||||| |||||||||||||||    
T  17822935 tataagttgttttcataagctatcttggagaacttatgaaaataagc 17822889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 24160613 - 24160547
Alignment:
Q  32 ttttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaag 98  Q
    |||| ||||||||||||||| || || ||||| | ||||||| |||| |||||||||||||| ||||    
T  24160613 ttttctataacaaaagataatataaattcaaactattttcatgtaagctataagttgttttcataag 24160547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 126
Target Start/End: Original strand, 27721717 - 27721763
Alignment:
Q  80 tataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||| ||||||| ||||||||||||||||||||  ||||||||||    
T  27721717 tataagctgttttcataagttatcctggagagcttgcgaaaataagc 27721763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 29194512 - 29194450
Alignment:
Q  41 acaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatc 103  Q
    ||||||||||| || || ||||| | ||||||| |||||||||| || |||||||||||||||    
T  29194512 acaaaagataaaataaaatcaaactattttcatataagttataacttattttcttaagttatc 29194450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 50004238 - 50004168
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||| ||||||||||||| |||   || || ||||||| ||||||||| |||||| |||||||||||||||    
T  50004238 aagttaaattgttttcatataaacaatgagctgttttcctaagttatcttggagaacttatgaaaataagc 50004168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 53626728 - 53626794
Alignment:
Q  32 ttttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaag 98  Q
    |||| ||||||||||||||| || || ||||| ||||||||| |||| |||||| ||||||| ||||    
T  53626728 ttttctataacaaaagataaaataaattcaaaatgttttcatataagctataagctgttttcataag 53626794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 30207683 - 30207595
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||||| |||| || || ||||| ||||||||| |||| |||||||||||||| |||| || | | ||||| ||||| ||||||||    
T  30207683 tataacaaaaaataaaataaa-tcaaactgttttcatataagctataagttgttttcataagctaccttagagagattatggaaataagc 30207595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 32920505 - 32920444
Alignment:
Q  45 aagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctg 106  Q
    ||||||| || ||||||||| ||||| ||  ||| |||||||||||||| ||||||||||||    
T  32920505 aagataaaataaagtcaaatcgttttaatagaagctataagttgttttcataagttatcctg 32920444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 41701558 - 41701513
Alignment:
Q  33 tttatataacaaaagataacatcaagtcaaattgttttcatttaag 78  Q
    ||||||||||||||||||| || ||||||||| |||||||| ||||    
T  41701558 tttatataacaaaagataaaataaagtcaaatcgttttcatataag 41701513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 45128423 - 45128334
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||||||||| ||||| ||||||| || |||| |||| ||||| |||||||| |||  | ||||  | |||||||| ||||||||    
T  45128423 tataacaaaagataaaatcaaatcaaattattctcatataagctataaattgttttcataaactgtcctataaagcttatggaaataagc 45128334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 47119078 - 47118989
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||| |||||||||| |  |||| ||||||||||||| |||| |||||||||| ||| || | |||| || ||| |||||||| ||||||    
T  47119078 tatatcaaaagataaaacaaagttaaattgttttcatataagctataagttgtattcatatgctatcttgaagaacttatgaagataagc 47118989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 50742905 - 50742864
Alignment:
Q  81 ataagttgttttcttaagttatcctggagagcttatgaaaat 122  Q
    |||| |||||||| |||| |||||||||||||||||||||||    
T  50742905 ataacttgttttcataagctatcctggagagcttatgaaaat 50742864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 53943591 - 53943652
Alignment:
Q  65 tgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||| |||  |||||||||||| | |||||| || ||||||||||||| ||||||||    
T  53943591 tgttttcatataaactataagttgtttacataagttgtcatggagagcttatggaaataagc 53943652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 55414490 - 55414445
Alignment:
Q  80 tataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||| |||||||| ||||||||| |||||| ||||||||||||||    
T  55414490 tataaattgttttcataagttatcttggagaacttatgaaaataag 55414445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 55870454 - 55870393
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaag 98  Q
    ||||||||||||| | || |||||||| ||||||||  |||| |||||||||||||| ||||    
T  55870454 tataacaaaagatcaaataaagtcaaactgttttcacataagctataagttgttttcataag 55870393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 101
Target Start/End: Original strand, 7297539 - 7297571
Alignment:
Q  69 ttcatttaagttataagttgttttcttaagtta 101  Q
    ||||||||||||||||||||||||| |||||||    
T  7297539 ttcatttaagttataagttgttttcataagtta 7297571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 7368150 - 7368090
Alignment:
Q  56 aagtcaaattgttttcatttaag-ttataagttgttttcttaagttatcctggagagctta 115  Q
    |||||||||||||||||| |||| ||||||||||||| | |||| ||| || |||||||||    
T  7368150 aagtcaaattgttttcatataagcttataagttgtttccataagctattctagagagctta 7368090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 126
Target Start/End: Complemental strand, 10194754 - 10194718
Alignment:
Q  90 tttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  10194754 tttcataagttatcttggagagcttatgaaaataagc 10194718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 10206257 - 10206193
Alignment:
Q  61 aaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||||||| ||| |||||||||| |||| ||| |||| |||| || |||||||||||| |||||    
T  10206257 aaattgtttacatataagttataatttgtcttcataagctatcatgaagagcttatgaagataag 10206193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 11264290 - 11264346
Alignment:
Q  69 ttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||| || |||||||||||||||| ||||  ||||| ||||||||||| |||||||    
T  11264290 ttcatatatgttataagttgttttcataagccatcctagagagcttatggaaataag 11264346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 24091439 - 24091491
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctgga 108  Q
    |||||||||| ||||||| |||| |||||  ||||||| ||||||||||||||    
T  24091439 aagtcaaattattttcatataagctataaactgttttcataagttatcctgga 24091491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 27043946 - 27043854
Alignment:
Q  34 ttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||||||| ||||| || |||| ||||||||||| | |||| |||||| ||||||  |||  |||| |||||| | |||||| ||||||    
T  27043946 ttatataacaaaggataaaataaagttaaattgttttcgtataagctataagatgtttttataaactatcttggagaacgtatgaatataagc 27043854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 36460544 - 36460604
Alignment:
Q  38 ataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaag 98  Q
    |||||||||||||| |||||| || | ||||||||| |||| |||||| ||||||| ||||    
T  36460544 ataacaaaagataagatcaagccacactgttttcatataagctataagctgttttcataag 36460604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 54325146 - 54325070
Alignment:
Q  41 acaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatg 117  Q
    ||||||||||| || |||||||| ||||||||| |||| |||||| | |||||  ||| |||| ||||||| |||||    
T  54325146 acaaaagataaaataaagtcaaactgttttcatataagctataagctattttcaaaagctatcatggagagtttatg 54325070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 113
Target Start/End: Original strand, 28933777 - 28933857
Alignment:
Q  33 tttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagct 113  Q
    ||||||||||||||||||| ||||| ||||||| |||||||||||||||||| |||||||| |||| |||||| |||||||    
T  28933777 tttatataacaaaagataaaatcaaatcaaattattttcatttaagttataaattgttttcataagctatcctagagagct 28933857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 11513858 - 11513944
Alignment:
Q  40 aacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||||||| || |||||||||||||||||| |||| |||||||||||||| |||| |||| |||||| ||| || ||||||||    
T  11513858 aacaaaagataaaataaagtcaaattgttttcatataagctataagttgttttcataagctatcatggagaacttttggaaataagc 11513944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 37276722 - 37276778
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagc 112  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  37276722 aagtcaaactgttttcatataagttataagttgttttcataagttatcctggagagc 37276778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 28803618 - 28803539
Alignment:
Q  38 ataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatg 117  Q
    |||||||||||||| || |||||||| || |||||| |||| || |||||||||||||||  ||||||||||||||||||    
T  28803618 ataacaaaagataaaataaagtcaaactgatttcatataagctacaagttgttttcttaaactatcctggagagcttatg 28803539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 37292462 - 37292373
Alignment:
Q  35 tatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataa 124  Q
    |||| |||||||||||| || |||| ||| | ||||||| |||| ||| ||||||||||||||| |||||||||||| |||||| |||||    
T  37292462 tatacaacaaaagataaaataaagtaaaactattttcatataagctattagttgttttcttaagctatcctggagagtttatgacaataa 37292373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 40158694 - 40158802
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataatt 155  Q
    |||||||| ||||||| | ||||  ||||||||||||| |||||||| |||||||||||||| || |||||    ||||||||||  |||||||||||      
T  40158694 aagtcaaactgttttcgtataagcaataagttgttttcataagttattctggagagcttatgtaattaagctgaaaacaacttataaacatgtcataagc 40158793  T
Q  156 tgttttcat 164  Q
    |||||||||    
T  40158794 tgttttcat 40158802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 125
Target Start/End: Original strand, 14666506 - 14666593
Alignment:
Q  38 ataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||||||||||||| || |||||||| || |||||| |||||||||||||||||||  ||| |||| |||   |||||||||||||||    
T  14666506 ataacaaaagataaaataaagtcaaactgatttcatataagttataagttgttttcacaagctatcttggtatgcttatgaaaataag 14666593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 125
Target Start/End: Original strand, 9477947 - 9477997
Alignment:
Q  75 taagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||||||||||||||||| |||| |||||||||||| |||||||||||||    
T  9477947 taagttataagttgttttcataagctatcctggagaggttatgaaaataag 9477997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 36863732 - 36863650
Alignment:
Q  43 aaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||||||| || ||||||||   |||| || |||||||||| |||||||| |||| |||| |||||||||||||||||||||    
T  36863732 aaaagataaaataaagtcaaacaatttttatataagttataaattgttttcataagctatcttggagagcttatgaaaataag 36863650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 6993833 - 6993748
Alignment:
Q  41 acaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||||| || | |||||||| | ||||| |||| |||| ||||||||| |||| ||| || ||||||||||||||||||||    
T  6993833 acaaaagataaaataaggtcaaattatattcatataagctataggttgttttcataagctatgcttgagagcttatgaaaataagc 6993748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 10563671 - 10563582
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||||||||  ||  ||| ||||||||||  | ||||||||||||||||||| |||| ||| ||| |||||||| ||||||||||    
T  10563671 tataacaaaagatagtatatagtgaaattgtttttttgtaagttataagttgttttcataagctatgctgaagagcttaagaaaataagc 10563582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 13869186 - 13869121
Alignment:
Q  59 tcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataa 124  Q
    ||||||| ||||||| |||| |||||| ||||||| |||||||||||||||| || ||||||||||    
T  13869186 tcaaattattttcatctaagctataagctgttttcataagttatcctggagaactaatgaaaataa 13869121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 126
Target Start/End: Original strand, 24097813 - 24097854
Alignment:
Q  85 gttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  24097813 gttgttttcataagttatcctggagagcttatgaaaataagc 24097854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 39983329 - 39983386
Alignment:
Q  67 ttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataa 124  Q
    ||||||| |||| |||||||||||||| |||| |||||||||||||| ||||||||||    
T  39983329 ttttcatataagctataagttgttttcataagctatcctggagagctaatgaaaataa 39983386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 164
Target Start/End: Complemental strand, 43065517 - 43065436
Alignment:
Q  83 aagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataatttgttttcat 164  Q
    ||||||||||| ||||||||| ||||||||||||  ||||||||    ||||| |||| |||||||||||| ||||||||||    
T  43065517 aagttgttttcataagttatcgtggagagcttattgaaataagctgaaaacaatttatggacatgtcataagttgttttcat 43065436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 656890 - 656802
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||||||||||||| ||  | ||||||||||||| | |||| | ||||||| |||| |||| |||| || ||||||||||||||||||    
T  656890 tataacaaaagataaaatataatcaaattgttttcgtataagctgtaagttgatttcataagctatcttgcagagcttatgaaaataag 656802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 10143129 - 10143209
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatg 117  Q
    ||||||||||||||| || |||||||| |||||| || |||| |||||||| ||||| |||| |||| ||||||| |||||    
T  10143129 tataacaaaagataaaattaagtcaaactgtttttatataagctataagtttttttcataagctatcatggagagtttatg 10143209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 33942112 - 33942192
Alignment:
Q  42 caaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaat 122  Q
    |||||||||| || |||||||| ||||||||| |||| |||||||||||||| ||||  ||| | ||||||| ||||||||    
T  33942112 caaaagataaaataaagtcaaactgttttcatgtaagctataagttgttttcataagccatcatagagagctaatgaaaat 33942192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 9395093 - 9395176
Alignment:
Q  43 aaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||| || |||  ||||||||||||| |||  |||||| ||||||| | |||||| ||| |||||||||||||||||||    
T  9395093 aaaagataaaataaagctaaattgttttcatataatctataagctgttttcattagttattctgtagagcttatgaaaataagc 9395176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 15377722 - 15377809
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataa 124  Q
    |||| |||| ||||| || |||| | ||||||||||| ||||||||||| ||||||| |||| ||| |||  ||||||||||||||||    
T  15377722 tataccaaaggataaaataaagttagattgttttcatataagttataagctgttttcataagctattctgaggagcttatgaaaataa 15377809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 40145421 - 40145480
Alignment:
Q  39 taacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaag 98  Q
    ||||||||||||| || ||||||| ||||||| || ||||||||||||||||||| ||||    
T  40145421 taacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 40145480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 43570377 - 43570460
Alignment:
Q  43 aaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||| |||| || |||| |||||||||||||||||| |||| ||| | ||| ||||  |||||||| |||||||||||||||||    
T  43570377 aaaatataaaatgaagttaaattgttttcatttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagc 43570460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 1625876 - 1625942
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaat 122  Q
    |||| ||||||||||| | ||||||||||||||||||| |||| |||| |||||| |||| ||||||    
T  1625876 aagttaaattgttttcgtataagttataagttgttttcataagctatcttggagaacttacgaaaat 1625942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 17952831 - 17952742
Alignment:
Q  19 tatatatatgctattttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggag 109  Q
    |||||||| |||||||  ||||||||||||||| || |||||||| | ||||||| |||| || ||| ||||||| |||| ||||||||||    
T  17952831 tatatataagctatttc-tataacaaaagataaaataaagtcaaactattttcatataagctacaagatgttttcataagctatcctggag 17952742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 22681295 - 22681209
Alignment:
Q  40 aacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||||||| |  ||| |||||||||||||| |||| |||||| ||||||| |||  |||||| |||| |||||| ||||||||    
T  22681295 aacaaaagataaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagc 22681209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 35755596 - 35755550
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttat 102  Q
    |||||||||||||||||| |||| |||||||||||||| ||||||||    
T  35755596 aagtcaaattgttttcatgtaagctataagttgttttcataagttat 35755550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 126
Target Start/End: Complemental strand, 42409377 - 42409327
Alignment:
Q  76 aagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||||  ||||||| |||||||| |||||||||||||||||||||||    
T  42409377 aagttataaactgttttcataagttattctggagagcttatgaaaataagc 42409327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 126
Target Start/End: Complemental strand, 2410162 - 2410069
Alignment:
Q  33 tttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||| ||||||||| | |  |||||||||||| ||||| |||  |||||||||||| | ||  |||||||| |||||||||| ||||||||    
T  2410162 tttatatgacaaaagatgaaacaaagtcaaattgtcttcatataatctataagttgtttgcatattttatcctgtagagcttatggaaataagc 2410069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 3673764 - 3673841
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagctt 114  Q
    |||||||||| |||| || |||| ||||||||||||| ||||||||||||| ||||| | || |||| || |||||||    
T  3673764 tataacaaaatataaaataaagttaaattgttttcatataagttataagtttttttcattagctatcttgaagagctt 3673841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 153
Target Start/End: Complemental strand, 5043666 - 5043557
Alignment:
Q  44 aaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattga 143  Q
    |||||||| || |||||||| ||||||||| |||| || ||||||||||| |||| |||| |||| |||| |||||| | |||    ||||||||||  |    
T  5043666 aaagataaaataaagtcaaactgttttcatataagctagaagttgttttcataagctatcatggatagctaatgaaagttagcttaaaacaacttatata 5043567  T
Q  144 catgtcataa 153  Q
    ||||||||||    
T  5043566 catgtcataa 5043557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 6988067 - 6988160
Alignment:
Q  32 ttttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||| ||||||||||||||| || |||||||||| ||||| |   ||||||||||||||||| |||| |||| || |||| ||||  |||||||    
T  6988067 ttttctataacaaaagataaaataaagtcaaattattttcttactagttataagttgttttcataagctatcttgaagagtttatagaaataag 6988160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 18066104 - 18066173
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||| ||||||||||||| |||| |||||| ||||||| |||| |||| |||||| |||| |||||||||    
T  18066104 aagttaaattgttttcatataagctataagctgttttcataagctatcttggagaacttaagaaaataag 18066173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 43141834 - 43141915
Alignment:
Q  43 aaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataa 124  Q
    |||||||||  | |||||||||||||| ||| |||| |||||| ||||||| |||| ||||||| |||| ||||| ||||||    
T  43141834 aaaagataaagtaaagtcaaattgtttccatataagctataagatgttttcataagctatcctgaagagtttatggaaataa 43141915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 12313282 - 12313198
Alignment:
Q  41 acaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||||||||| || |||| ||||| ||||  |||||| || || |||||| | |||| |||| |||||||||||||||||||||    
T  12313282 acaaaagataaaataaagttaaattatttttgtttaagctacaaattgtttacataagctatcttggagagcttatgaaaataag 12313198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 23143089 - 23143029
Alignment:
Q  39 taacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagt 99  Q
    ||||||||||||| ||||| ||||||||||||| | |||| ||| |||||||||| |||||    
T  23143089 taacaaaagataaaatcaaatcaaattgttttcttataagctattagttgttttcataagt 23143029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 23554879 - 23554819
Alignment:
Q  39 taacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagt 99  Q
    ||||||||||||| ||||| ||||||||||||| | |||| ||| |||||||||| |||||    
T  23554879 taacaaaagataaaatcaaatcaaattgttttcttataagctattagttgttttcataagt 23554819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 25790083 - 25790171
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||| |||||||||  | |||||||| ||||||||| |||| || || ||||||   |||  ||||||||||||||||||||||||||    
T  25790083 tataaaaaaagataaagtgaagtcaaactgttttcatataagctacaaattgtttggataatctatcctggagagcttatgaaaataag 25790171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 41852013 - 41851969
Alignment:
Q  40 aacaaaagataacatcaagtcaaattgttttcatttaagttataa 84  Q
    |||||||||||| || |||||||||||||||||| ||||||||||    
T  41852013 aacaaaagataaaattaagtcaaattgttttcatataagttataa 41851969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 4026761 - 4026863
Alignment:
Q  23 tatatgctattttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaat 122  Q
    |||| |||||||| |||| |||||||||| || |||| ||||| ||||    ||| ||||||| ||||||| ||| |||||||| ||| |||||||||||    
T  4026761 tataagctatttt-tatagcaaaagataaaataaagttaaattatttttgcataaattataagctgttttcataaattatcctgaagaacttatgaaaat 4026859  T
Q  123 aagc 126  Q
    ||||    
T  4026860 aagc 4026863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 9530789 - 9530726
Alignment:
Q  89 ttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcata 152  Q
    ||||| |||| ||||||||||||||||||||| ||||| |  || ||||||| |||||||||||    
T  9530789 ttttcataagctatcctggagagcttatgaaagtaagctaaaaataacttatggacatgtcata 9530726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 125
Target Start/End: Complemental strand, 13630389 - 13630306
Alignment:
Q  42 caaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||||||||| || |||||||| ||||||||| |||   ||||||||||||| |||  |||||| ||||| |||||| ||||||    
T  13630389 caaaagataagataaagtcaaactgttttcatataatcaataagttgttttcctaatctatccttgagagtttatgacaataag 13630306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 29300627 - 29300670
Alignment:
Q  62 aattgttttcatttaagttataagttgttttcttaagttatcct 105  Q
    |||||||||||| ||||||||||||||||||| |||| ||||||    
T  29300627 aattgttttcatgtaagttataagttgttttcataagctatcct 29300670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 43985074 - 43985027
Alignment:
Q  79 ttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||||||||| |||| |||| || |||||||||||||||||||    
T  43985074 ttataagttgttttcataagctatcttgaagagcttatgaaaataagc 43985027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 11063518 - 11063568
Alignment:
Q  110 agcttatgaaaataagcgagcaacaacttattgacatgtcataatttgttt 160  Q
    ||||||||||||||||| |  |||||||||| ||||||||||||| |||||    
T  11063518 agcttatgaaaataagctaaaaacaacttatggacatgtcataatatgttt 11063568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 160
Target Start/End: Complemental strand, 30552727 - 30552633
Alignment:
Q  67 ttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaac-aacttattgacatgtcataatttgttt 160  Q
    ||||||| | || ||||| || ||||| |||  |||||| ||||||||||| |||||||| |  ||| |||||||||||||||||||| ||||||    
T  30552727 ttttcatatcagctataaattattttcataaactatcctagagagcttatggaaataagctaaaaaccaacttattgacatgtcataagttgttt 30552633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 34339866 - 34339952
Alignment:
Q  40 aacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||||||| || |||||||||| ||||| | |||| |||||  | ||||| |||||  || ||||||||||| ||||||||||    
T  34339866 aacaaaagataaaataaagtcaaattattttcgtataaggtataaactattttcataagtattcttggagagcttaagaaaataagc 34339952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 35099713 - 35099627
Alignment:
Q  37 tataacaaaagataacatcaagtcaaat-tgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaat 122  Q
    ||||||||||||||| || || |||||  | |||||||| |||||||||| || |||| |||| |||||| ||||||||||| ||||    
T  35099713 tataacaaaagataaaataaaatcaaaactattttcattaaagttataagctgctttcataagctatccttgagagcttatggaaat 35099627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 39929824 - 39929874
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagtt 87  Q
    ||||||||||||||| ||||| |||||||||||| || |||| ||||||||    
T  39929824 tataacaaaagataaaatcaaatcaaattgtttttatataagctataagtt 39929874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 1493626 - 1493537
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||| |||||| || ||||| | |||||||||| |||| |||| | ||||||| ||||| ||||||   | |||||||||||||||    
T  1493626 tataacaatagataaaataaagtctagttgttttcatataagctatatgctgttttcataagtcatcctgactaacttatgaaaataagc 1493537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 5133729 - 5133818
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||||||||| || |||  ||| |||||| || |||| |||||| |||||||  ||||||||   ||||||||||| ||||||||    
T  5133729 tataacaaaagataaaataaagataaactgtttttatataagatataagctgttttcaaaagttatctaagagagcttatggaaataagc 5133818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 9556199 - 9556284
Alignment:
Q  40 aacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||||| ||||| || |||||||  |||||||||  ||| |||||  ||||||| |||| |||||| || ||||||||||||||||    
T  9556199 aacaaacgataaaataaagtcaacgtgttttcatacaagctataaactgttttcataagctatcctagaaagcttatgaaaataag 9556284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 10884591 - 10884546
Alignment:
Q  80 tataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||||| ||||||| |||| |||||| |||||||||||||||||||    
T  10884591 tataagctgttttcataagctatcctagagagcttatgaaaataag 10884546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 33256697 - 33256786
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||| |||||| || |||||||| ||||||||| |||  ||||||  |||||| ||||  |||||| ||| | |||||||||||||    
T  33256697 tataacaatagataaaataaagtcaaactgttttcatataaactataagcagttttcataagccatcctgaagaccgtatgaaaataagc 33256786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 123
Target Start/End: Original strand, 42907316 - 42907404
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgtttt--cttaagttatcctggagagcttatgaaaata 123  Q
    ||||||| |||| || || |||| ||||||||||| |||||| |||||||||||||  | || | || | |||||||||||||||||||    
T  42907316 tataacagaagaaaaaataaagttaaattgttttcgtttaagctataagttgttttcacatatgctaacttggagagcttatgaaaata 42907404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 152
Target Start/End: Complemental strand, 7103588 - 7103480
Alignment:
Q  45 aagataacatcaagtcaaattgttttcatttaagttataagttgtttt-cttaagttatcctggagagcttatgaaaataagcgagcaacaacttattga 143  Q
    ||||||| || |||||||| |||||| || |||| |||||| |||||| | |||| |||| | ||||| || ||||||||||| |  |||||||||| ||    
T  7103588 aagataaaataaagtcaaactgttttaatataagctataagctgtttttcataagctatcttagagagtttgtgaaaataagctaaaaacaacttatgga 7103489  T
Q  144 catgtcata 152  Q
     ||||||||    
T  7103488 tatgtcata 7103480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 11344397 - 11344341
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttc 93  Q
    ||||||||||||||| |  ||||||||||||||||||  ||| ||||| ||||||||    
T  11344397 tataacaaaagataaaagaaagtcaaattgttttcatacaagctataaattgttttc 11344341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 13234515 - 13234587
Alignment:
Q  89 ttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataatttgtttt 161  Q
    ||||||||| ||||||| || |||||||||| |||||     |||||||||| ||||||||||||| ||||||    
T  13234515 ttttcttaacttatccttgatagcttatgaagataagttgaaaacaacttatggacatgtcataatgtgtttt 13234587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 16503338 - 16503398
Alignment:
Q  66 gttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||| ||| |||| |||||||| || || ||||||||| ||||||| ||||||||||||||    
T  16503338 gtttccatataagctataagttcttctcataagttatcttggagaggttatgaaaataagc 16503398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 18962159 - 18962064
Alignment:
Q  28 gctattttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataa 124  Q
    |||||||| ||||||||||||||| || |||| ||| ||||||||| |||| |||||  | ||||| |||| |||| |||||||  |||| ||||||    
T  18962159 gctatttt-tataacaaaagataaaataaagttaaactgttttcatataagctataaactattttcataagctatcatggagagactatggaaataa 18962064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 37053551 - 37053607
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttc 93  Q
    ||||||| || |||| || |||||||| ||||||||| ||||||||||||| |||||    
T  37053551 tataacagaaaataaaataaagtcaaactgttttcatataagttataagtttttttc 37053607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 7e-21; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 43 - 126
Target Start/End: Complemental strand, 32386670 - 32386587
Alignment:
Q  43 aaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||| || | |||||||||||||||| |||| |||| ||||||||| | ||||||||||||||||||||||||||||||    
T  32386670 aaaagataaaataaggtcaaattgttttcatataaggtatacgttgttttcattagttatcctggagagcttatgaaaataagc 32386587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 153
Target Start/End: Complemental strand, 281961 - 281845
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaac 136  Q
    ||||||||||||||| || ||||||| |||||||||| |||| |||||| ||| ||| |||| |||||| ||||||| ||| ||||||||    ||||||    
T  281961 tataacaaaagataaaataaagtcaacttgttttcatataagctataagctgtgttcataagctatcctagagagctcatggaaataagctgaaaacaac 281862  T
Q  137 ttattgacatgtcataa 153  Q
    |||| ||||||||||||    
T  281861 ttatagacatgtcataa 281845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 37 - 163
Target Start/End: Original strand, 4006671 - 4006797
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaac 136  Q
    ||||||||| ||||| || ||||||||||||||| || |||| |||||||||||||| |||| |||||  ||||| ||||||||||||||    || |||    
T  4006671 tataacaaatgataaaataaagtcaaattgtttttatataagctataagttgttttcataagctatccctgagaggttatgaaaataagctgaaaataac 4006770  T
Q  137 ttattgacatgtcataatttgttttca 163  Q
    |||| ||||| || ||| |||||||||    
T  4006771 ttatggacatatcgtaagttgttttca 4006797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 37 - 123
Target Start/End: Complemental strand, 33787858 - 33787772
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaata 123  Q
    |||||||||| |||| |  ||||||||||| |||||| ||||||||||| ||||||| ||||||||| ||||||||||||| |||||    
T  33787858 tataacaaaatataaaacaaagtcaaattgatttcatataagttataagctgttttcataagttatcttggagagcttatggaaata 33787772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 24782016 - 24782103
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataa 124  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||||||||| |  |||  |||  |||||| ||||||||||||||||||    
T  24782016 tataacaaaagataaaatcaaatcaaattgttttcatataagttataagctactttaataaactatccttgagagcttatgaaaataa 24782103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 160
Target Start/End: Original strand, 2117379 - 2117483
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataatt 155  Q
    |||||||| | ||||||| |||  |||||||||||||| ||||||||||| ||||||||||  |||||||| |  |||| ||||| |||||| ||||| |    
T  2117379 aagtcaaactattttcatataatctataagttgttttcataagttatcctagagagcttattgaaataagctaaaaacagcttatagacatgccataaat 2117478  T
Q  156 tgttt 160  Q
    |||||    
T  2117479 tgttt 2117483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 1275134 - 1275195
Alignment:
Q  65 tgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||| |||| |||||| ||||||| || |||||||||||||||||||| ||||||||    
T  1275134 tgttttcatataagctataagctgttttcatatgttatcctggagagcttatggaaataagc 1275195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 5328931 - 5329018
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||||||||||||| || ||||||||   |||| || ||| ||||||| ||||||| ||||||||| ||||||| |||||||||||||    
T  5328931 tataacaaaagataaaataaagtcaaaccatttttatataa-ttataagctgttttcgtaagttatcatggagagtttatgaaaataag 5329018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 9912099 - 9912031
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataa 124  Q
    |||||||||||||||| | ||||||| ||||| ||||| |||||||||| ||||| ||||| |||||||    
T  9912099 aagtcaaattgttttcgtataagttacaagttattttcataagttatcccggagaacttattaaaataa 9912031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 10400245 - 10400313
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataa 124  Q
    ||||||||||||| |||| |||| |||||| ||| ||| |||| |||||||| ||||||||||||||||    
T  10400245 aagtcaaattgttatcatataagctataagatgtcttcataagatatcctggtgagcttatgaaaataa 10400313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 1497943 - 1498026
Alignment:
Q  42 caaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||||| ||| || |||||||| ||||||||| | |||||||||  |||||| |||  |||| |||||||||||||||||||||    
T  1497943 caaaaggtaaaataaagtcaaactgttttcatatgagttataagaagttttcataaactatcttggagagcttatgaaaataag 1498026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 127
Target Start/End: Original strand, 18264305 - 18264376
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcg 127  Q
    ||||||||||||||||||  |||||||||| | |||||||||  ||||||| |||| ||||| |||||||||    
T  18264305 aagtcaaattgttttcatacaagttataagctattttcttaaactatcctgaagaggttatggaaataagcg 18264376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 22742323 - 22742394
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctgga 108  Q
    ||||||||| ||||| || |||||||||||||||||| |||| |||||| | ||||  ||||||||||||||    
T  22742323 tataacaaaggataaaataaagtcaaattgttttcatataagctataagctatttttataagttatcctgga 22742394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 24836312 - 24836226
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||||||||| || |||||||||||||||| | |||  |||||   |||||| |||| |||| ||||||||||||| ||||||||    
T  24836312 tataacaaaagataaaataaagtcaaattgttttcgtataaactataa---gttttcgtaagctatcatggagagcttatggaaataagc 24836226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 126
Target Start/End: Complemental strand, 31671181 - 31671098
Alignment:
Q  43 aaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||| |  |||| ||||||||||||| |||| |||||| ||||||| |||  |||||| || |||||||||||||||||    
T  31671181 aaaagataaaacaaagttaaattgttttcatataagctataagctgttttcgtaaactatcctagatagcttatgaaaataagc 31671098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 126
Target Start/End: Complemental strand, 31812088 - 31812037
Alignment:
Q  75 taagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||| |||||||||||||| |||| |||| ||||||||||||||||||||||    
T  31812088 taagatataagttgttttcataagctatcttggagagcttatgaaaataagc 31812037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 14492259 - 14492333
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagag 111  Q
    |||| |||||||||| || ||||||||||||||| ||  ||| |||||| ||||||| ||||||||||| |||||    
T  14492259 tataccaaaagataaaatgaagtcaaattgttttgatacaagctataagctgttttcataagttatcctagagag 14492333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 9668115 - 9667975
Alignment:
Q  19 tatatatatgctattttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatga 118  Q
    |||||||| |||||||  ||||||||||||||||||  |||| |||||||||||| |||| || || |||||||| |||  | |   ||||||||||||     
T  9668115 tatatataagctatttg-tataacaaaagataacatagagtcgaattgttttcatataagctacaatttgttttcataaactgtttcggagagcttatgg 9668017  T
Q  119 aaataagcgagcaacaacttattgacatgtcataatttgttt 160  Q
    |||||||     |||| ||||| |||||||||||| ||||||    
T  9668016 aaataagttgaaaacagcttatggacatgtcataagttgttt 9667975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 9732443 - 9732512
Alignment:
Q  47 gataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttat 116  Q
    ||||| || ||||||||||||||||||  ||| ||||||||||||||  |||||||||| ||||| ||||    
T  9732443 gataaaattaagtcaaattgttttcatgcaaggtataagttgttttcacaagttatccttgagagtttat 9732512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 10150365 - 10150304
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaag 98  Q
    |||||||||| |||| ||||| ||||||||||||||| | ||||||||| ||||||| ||||    
T  10150365 tataacaaaatataaaatcaaatcaaattgttttcatatcagttataagatgttttcataag 10150304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 32848690 - 32848621
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||||||  ||||||||| |||||||||| || ||||| || |||||| |||||||||||||| ||||||    
T  32848690 aagtcaatctgttttcatataagttataaatttttttcatatgttatcttggagagcttatgataataag 32848621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 5550098 - 5550169
Alignment:
Q  46 agataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaa 120  Q
    ||||||||| |||||||||||||||||| |||| |||||| ||||||| ||   |||||  ||||||||||||||    
T  5550098 agataacataaagtcaaattgttttcatataagctataagctgttttcata---tatccatgagagcttatgaaa 5550169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 8035233 - 8035173
Alignment:
Q  65 tgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||||||| |||| || ||||||||||| ||||||||||| || |||||| |||||||||    
T  8035233 tgttttcatataagctagaagttgttttcataagttatcctagaaagcttacgaaaataag 8035173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 25100020 - 25100088
Alignment:
Q  57 agtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||||||||||||||||  |||||||||||||||||| |||| |||| |  |||||||||  |||||||    
T  25100020 agtcaaattgttttcatagaagttataagttgttttcataagctatcttaaagagcttatagaaataag 25100088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 29274342 - 29274262
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatg 117  Q
    |||| |||||||||| || |||||||||||||||||| |||| |||||  ||||||| |||| |||  ||| |||||||||    
T  29274342 tatagcaaaagataaaataaagtcaaattgttttcatataagctataaactgttttcataagatattgtggcgagcttatg 29274262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 164
Target Start/End: Complemental strand, 33500594 - 33500466
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag-cgagcaacaa 135  Q
    |||||||||||||||  | || ||||| |||||  || ||||||||||| ||||| |  ||| |||| || ||| |||||| ||||||| |||  |||||    
T  33500594 tataacaaaagataaagtaaaatcaaactgtttcaatataagttataagctgtttccgcaagctatcatgtagaacttatggaaataagtcgaaaaacaa 33500495  T
Q  136 cttattgacatgtcataatttgttttcat 164  Q
    |||||  ||||||||||| ||||||||||    
T  33500494 cttatgcacatgtcataaattgttttcat 33500466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 1402953 - 1403032
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttat 116  Q
    ||||||||||||||| || |||| ||| | ||||||| |||| ||||| |||||||| |||| |||| |||||| |||||    
T  1402953 tataacaaaagataaaataaagttaaactattttcatataagctataaattgttttcataagctatcatggagatcttat 1403032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 4420645 - 4420723
Alignment:
Q  82 taagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataatttgttt 160  Q
    |||||| ||||| |||| |||| ||||||||||||| ||||||||    |||| |||||  ||||||||||||||||||    
T  4420645 taagttattttcctaagctatcttggagagcttatggaaataagctgaaaacagcttatgaacatgtcataatttgttt 4420723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 11363495 - 11363426
Alignment:
Q  22 atatatgctattttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgtttt 92  Q
    ||||| |||||||| || || ||||||||| || |||| ||||| ||||||| ||||||||||||||||||    
T  11363495 atataagctatttt-taaaagaaaagataaaataaagttaaattattttcatgtaagttataagttgtttt 11363426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 22691625 - 22691559
Alignment:
Q  45 aagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagag 111  Q
    |||||||||| || ||||||||||||||| ||||||||||  | ||||| |||  ||||||||||||    
T  22691625 aagataacataaattcaaattgttttcatataagttataacctattttcataacctatcctggagag 22691559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 29940748 - 29940794
Alignment:
Q  32 ttttatataacaaaagataacatcaagtcaaattgttttcatttaag 78  Q
    |||| ||||||||||||||| || ||||||| |||||||||||||||    
T  29940748 ttttctataacaaaagataaaataaagtcaatttgttttcatttaag 29940794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 33067135 - 33067192
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagctt 114  Q
    ||||| ||||||||||||||| | |||||||||||||| |||| |||| ||||||||||    
T  33067135 aagtcgaattgttttcattta-gctataagttgttttcataagctatcttggagagctt 33067192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 158
Target Start/End: Original strand, 3155137 - 3155253
Alignment:
Q  41 acaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttat 140  Q
    ||||||||||| |  |||||||| ||||| ||| |||  |||||| | ||||| |||| ||||||||||||| |||| ||||||||    |||| |||||    
T  3155137 acaaaagataaaacaaagtcaaactgtttccatataacctataagctattttcataagatatcctggagagc-tatggaaataagctgaaaacagcttat 3155235  T
Q  141 tgacatgtcataatttgt 158  Q
     |||||||||||| ||||    
T  3155236 agacatgtcataagttgt 3155253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 4247146 - 4247085
Alignment:
Q  65 tgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||| ||||||||||| ||||||| |||||| |||| ||  ||||||||||| ||||    
T  4247146 tgttttcatataagttataagctgttttcataagttgtcctagaaggcttatgaaaacaagc 4247085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 5551415 - 5551452
Alignment:
Q  33 tttatataacaaaagataacatcaagtcaaattgtttt 70  Q
    ||||||||||||||||||| || |||||||||||||||    
T  5551415 tttatataacaaaagataaaataaagtcaaattgtttt 5551452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 9093669 - 9093580
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||| |||||||||| || |||| ||||||||||| | |||| |||||| ||||||| |||| | || | |||| |||| ||||||||||    
T  9093669 tatatcaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcataagctgtcttagagaacttaagaaaataagc 9093580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 30523952 - 30524021
Alignment:
Q  95 taagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataatttgttttcat 164  Q
    |||| ||||||  |||||||||| |||||||| |  | ||||| || |||||||||||||||||||||||    
T  30523952 taagctatcctaaagagcttatggaaataagctaaaagcaactaatggacatgtcataatttgttttcat 30524021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 3168341 - 3168285
Alignment:
Q  70 tcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||| |||| |||||  |||||||||||| |||||||||||||||| | ||||||||    
T  3168341 tcatataagctataaactgttttcttaagctatcctggagagcttaaggaaataagc 3168285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 7713983 - 7714023
Alignment:
Q  38 ataacaaaagataacatcaagtcaaattgttttcatttaag 78  Q
    |||||||||||||| || |||||||||||||||||| ||||    
T  7713983 ataacaaaagataaaataaagtcaaattgttttcatataag 7714023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 20368253 - 20368205
Alignment:
Q  77 agttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||||||||||||||| |||| | || |||||| ||||||||||||||    
T  20368253 agttataagttgttttcataagctttcttggagaacttatgaaaataag 20368205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 32386176 - 32386108
Alignment:
Q  80 tataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgt 148  Q
    |||||| ||||||| | |||||||||||| ||||||||||| |||||    |||||||||| |||||||    
T  32386176 tataagctgttttcattagttatcctggaaagcttatgaaagtaagctgaaaacaacttatggacatgt 32386108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 33828622 - 33828658
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgtttt 92  Q
    |||||||||||||||| | ||||||||||||||||||    
T  33828622 aagtcaaattgttttcgtataagttataagttgtttt 33828658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 35095040 - 35094952
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||||||||| |||| || | |||||||||||||  |  |||||||| | ||||||  || | |||| |||||||||||||||||||||    
T  35095040 tataacaaaatataaaataatgtcaaattgtttttttacaagttatatgctgtttttgtatgatatcgtggagagcttatgaaaataag 35094952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 7e-21; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 4200169 - 4200275
Alignment:
Q  19 tatatatatgctattttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatga 118  Q
    |||||||| | |||||| ||||||||||||||| || ||||||| |||||||||| |||| ||||  |||||||| |||| |||||||||| ||||||||    
T  4200169 tatatataagttatttt-tataacaaaagataaaataaagtcaagttgttttcatataagctatatattgttttcgtaagatatcctggagggcttatga 4200267  T
Q  119 aaataagc 126  Q
    ||||||||    
T  4200268 aaataagc 4200275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 125
Target Start/End: Complemental strand, 7218186 - 7218099
Alignment:
Q  38 ataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||| ||||| ||| || |||||||||||||||||| |||| |||||||||||||| |||  ||||||||||| ||||||||||||||    
T  7218186 ataataaaaggtaaaataaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaataag 7218099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 164
Target Start/End: Original strand, 25479538 - 25479665
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaac 136  Q
    |||||| |||||||| || | |||||||||| ||||| || | |||||||||||||| |||| |||||| ||||||||||||||||||||    ||||||    
T  25479538 tataaccaaagataaaataacgtcaaattgtcttcatataggctataagttgttttcataagctatcctagagagcttatgaaaataagctgaaaacaac 25479637  T
Q  137 ttattgacatgtcataatttgttttcat 164  Q
    | ||  |||||||||||| | |||||||    
T  25479638 taatgaacatgtcataatctattttcat 25479665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 27738301 - 27738204
Alignment:
Q  29 ctattttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||| || |||||||||||| || |||||||||||||||||| |||| ||||| |||||||| |||| ||| | |||||||||||| | ||||||    
T  27738301 ctattttctacaacaaaagataaaataaagtcaaattgttttcatataagctataatttgttttcataagctatacaggagagcttatggatataagc 27738204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 160
Target Start/End: Original strand, 30371104 - 30371228
Alignment:
Q  36 atataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaa 135  Q
    |||||||||||||||| || || ||||||||||||||| |||| |||||||||||||| ||||  ||  |||||||| |||  ||||||||    |||||    
T  30371104 atataacaaaagataaaataaactcaaattgttttcatataagctataagttgttttcataagacattttggagagcgtattgaaataagctgaaaacaa 30371203  T
Q  136 cttattgacatgtcataatttgttt 160  Q
    ||||| |||||||||| | ||||||    
T  30371204 cttatggacatgtcattagttgttt 30371228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 124
Target Start/End: Complemental strand, 6933074 - 6932987
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataa 124  Q
    |||||||||| |||| || ||||||||||||||||||  ||||||| |||| ||||| |||||| ||||| |||||||||| ||||||    
T  6933074 tataacaaaacataaaataaagtcaaattgttttcatagaagttattagttcttttcataagttgtcctgaagagcttatggaaataa 6932987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 125
Target Start/End: Complemental strand, 36151617 - 36151530
Alignment:
Q  38 ataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||||||||||||| || |||||||||||||||| | |||||||||| |||||||| |||   ||||| | |||||||||||||||||    
T  36151617 ataacaaaagataaaataaagtcaaattgttttcgtataagttataaattgttttcgtaaacaatcctagtgagcttatgaaaataag 36151530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 25005891 - 25005821
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||| |||||||||| |||| |||||||||||||| |||| ||||||||||||||||| |||| ||||    
T  25005891 aagtcaacttgttttcatataagctataagttgttttcataagctatcctggagagcttataaaaacaagc 25005821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 44032112 - 44032027
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaat 122  Q
    ||||||||||| ||| || |||||||||||||||||| |||| |||||  | ||||||||||||||| || |||||||||| ||||    
T  44032112 tataacaaaagctaaaataaagtcaaattgttttcatataagctataaactattttcttaagttatcttgaagagcttatggaaat 44032027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 49517027 - 49517088
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaag 98  Q
    ||||||||||||||| || ||||||||||||||||||||||| |||||| ||||||| ||||    
T  49517027 tataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgttttcataag 49517088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 5756799 - 5756711
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||||||||||| | || |||| ||| ||||||||| ||| ||||||||||||||| |||| || |||||||||||||  ||||||||    
T  5756799 tataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttaccaaaataag 5756711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 5546677 - 5546744
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaata 123  Q
    ||||| ||||||||| ||| ||| |||||||||| |||||||||||| ||| ||||||||||||||||    
T  5546677 aagtcgaattgtttttattcaagctataagttgtattcttaagttattctgaagagcttatgaaaata 5546744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 17269226 - 17269285
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagctta 115  Q
    |||||||||||||||||| ||||  ||||||||||||| |||| ||||||||||||||||    
T  17269226 aagtcaaattgttttcatataagcaataagttgttttcataagctatcctggagagctta 17269285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 5592792 - 5592695
Alignment:
Q  43 aaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttat 140  Q
    ||||||||| || ||||| ||||||| |||| |||| |||||||||||||| |||| ||  ||  |||||||||||||||||||  | ||||||||||    
T  5592792 aaaagataaaataaagtcgaattgttgtcatataagctataagttgttttcataagctagtcttaagagcttatgaaaataagctggaaacaacttat 5592695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 33976674 - 33976731
Alignment:
Q  68 tttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||||| |||||||||||||||||||||||  |||||| ||||||||||| |||||||    
T  33976674 tttcatataagttataagttgttttcttaacctatcctagagagcttatggaaataag 33976731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 45667836 - 45667787
Alignment:
Q  76 aagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||||||||| | |||||||||| ||||||||||||||||||||||||||    
T  45667836 aagttataagatattttcttaagctatcctggagagcttatgaaaataag 45667787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 153
Target Start/End: Original strand, 4622050 - 4622166
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaac 136  Q
    ||||||||||||| | || || ||||| | ||||||| |||| |||||| ||||| | || | |||| |||||||||| ||||||||||| |  |||| |    
T  4622050 tataacaaaagatcaaatgaattcaaactcttttcatataagctataagctgtttccatatgctatcttggagagcttgtgaaaataagctaaaaacagc 4622149  T
Q  137 ttattgacatgtcataa 153  Q
    |||| ||||||||||||    
T  4622150 ttatggacatgtcataa 4622166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 6074431 - 6074519
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||||||||||| | || |||| ||| ||||||||| |||| ||| ||||||||||||||| || |||| ||||||||  ||||||||    
T  6074431 tataacaaaagatgatataaagttaaactgttttcatataagctatgagttgttttcttaagctagcctgaagagcttaccaaaataag 6074519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 153
Target Start/End: Complemental strand, 12564611 - 12564496
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaac 136  Q
    |||||||||||||||| | ||||||||  |||| |||  ||| |||| ||||||||| |||| |||| |||||| |||||| ||||||||    ||||||    
T  12564611 tataacaaaagataacctaaagtcaaaccgttt-catacaaggtataggttgttttcataagctatcttggagaacttatggaaataagctgaaaacaac 12564513  T
Q  137 ttattgacatgtcataa 153  Q
    |||||||| ||||||||    
T  12564512 ttattgacttgtcataa 12564496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 25006128 - 25006068
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttat 116  Q
    |||||||||||||||||| |||| |||||||||||||| |||| |||| |||||| |||||    
T  25006128 aagtcaaattgttttcatataagctataagttgttttcataagctatcttggagatcttat 25006068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 40304171 - 40304111
Alignment:
Q  33 tttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttc 93  Q
    ||||||||||||||||||| || || ||| ||||||||||| ||||||||||| |||||||    
T  40304171 tttatataacaaaagataaaataaaatcacattgttttcatataagttataagctgttttc 40304111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 6110258 - 6110211
Alignment:
Q  59 tcaaattgttttcatttaagttataagttgttttcttaagttatcctg 106  Q
    |||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  6110258 tcaaattgttttcatttaaggtataagttgttttcataatttatcctg 6110211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 153
Target Start/End: Complemental strand, 28689567 - 28689449
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttc--ttaagttatcctggagagcttatgaaaataagcgagcaaca 134  Q
    |||| |||||||||| || ||  ||| | |||||||| |||| ||||||||||||||   |||| |||| |||| |||||||||||||||||    ||||    
T  28689567 tatatcaaaagataaaataaatgcaagtggttttcatataagctataagttgttttcatataagctatcttggaaagcttatgaaaataagctgaaaaca 28689468  T
Q  135 acttattgacatgtcataa 153  Q
    |||||| ||||||||||||    
T  28689467 acttatggacatgtcataa 28689449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 119
Target Start/End: Complemental strand, 33527257 - 33527178
Alignment:
Q  40 aacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaa 119  Q
    |||||||||||| ||  ||||||| ||||||||| |||  |||||| ||||||| ||||||||||| |||| ||||||||    
T  33527257 aacaaaagataaaatacagtcaaactgttttcatataatctataagctgttttcataagttatcctcgagatcttatgaa 33527178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 126
Target Start/End: Original strand, 35179126 - 35179185
Alignment:
Q  67 ttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||| ||||||||||||| ||||||| ||||||||  |||||| |||||||||||||||    
T  35179126 ttttcgtttaagttataagctgttttcataagttattatggagaacttatgaaaataagc 35179185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 37241905 - 37241846
Alignment:
Q  67 ttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||| |||| || ||||||||||| |||| |||||| ||||||||||||||||||||    
T  37241905 ttttcatataagctagaagttgttttcataagatatcctagagagcttatgaaaataagc 37241846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 44422678 - 44422745
Alignment:
Q  59 tcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||| ||||||||| |||| |||||| | ||||  |||| |||||||||||||||||||||||||||    
T  44422678 tcaaactgttttcatataagctataagctatttttataagctatcctggagagcttatgaaaataagc 44422745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 126
Target Start/End: Original strand, 5924055 - 5924101
Alignment:
Q  80 tataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  5924055 tataagttgttttcataagttatcctagagagcttatggaaataagc 5924101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 15579461 - 15579562
Alignment:
Q  59 tcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc-gagcaacaacttattgacatgtcataatttg 157  Q
    ||||||||||||||| |||| |||||| |||| || |||| |||| ||  ||| ||||| |||||||| ||| |||||||||| |||||||||||| |||    
T  15579461 tcaaattgttttcatgtaagctataagctgttctcgtaagctatcatgttgagtttatggaaataagctgag-aacaacttatggacatgtcataagttg 15579559  T
Q  158 ttt 160  Q
    |||    
T  15579560 ttt 15579562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 31517850 - 31517764
Alignment:
Q  40 aacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||||||| || |||| |||||| |||||| |||| |||||| ||| ||| |||  | || ||||||||||||||||||||||    
T  31517850 aacaaaagataaaataaagttaaattgatttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagc 31517764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 3224376 - 3224496
Alignment:
Q  33 tttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc-gagca 131  Q
    ||||||||||||| ||| |  | |||||||||||  ||||| |||| |||| | ||||||  |||| ||| || |||| ||||||||||||||| ||| |    
T  3224376 tttatataacaaaggatcaagtaaagtcaaattgaattcatataagctatagggtgtttttataagctattctagagaacttatgaaaataagctgag-a 3224474  T
Q  132 acaacttattgacatgtcataa 153  Q
    ||||||||| ||||||||||||    
T  3224475 acaacttatggacatgtcataa 3224496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 11639471 - 11639402
Alignment:
Q  95 taagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataatttgttttcat 164  Q
    |||||||| || |||||||||||||||||||| |  |||| ||||| ||||||||||||  |||||||||    
T  11639471 taagttattctagagagcttatgaaaataagctaaaaacagcttatggacatgtcataagctgttttcat 11639402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 15515520 - 15515585
Alignment:
Q  59 tcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataa 124  Q
    ||||| ||||||| | |||| |||||||||||||| ||||||||| |||| |||||||| ||||||    
T  15515520 tcaaaatgttttcgtataagctataagttgttttcataagttatcatggatagcttatggaaataa 15515585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 27963444 - 27963367
Alignment:
Q  76 aagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataa 153  Q
    ||||| |||||||||||| |||| |||  ||||||||||||  |||||||| |  |||||||||| ||||||||||||    
T  27963444 aagttctaagttgttttcataagctattatggagagcttatataaataagctaaaaacaacttatggacatgtcataa 27963367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 28467420 - 28467359
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaag 98  Q
    ||||||||||||||| || |||||||||| ||||||| |||| || ||||||||||| ||||    
T  28467420 tataacaaaagataaaataaagtcaaattattttcatataagctacaagttgttttcataag 28467359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 29793742 - 29793827
Alignment:
Q  40 aacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||||||||||||| |||| || |||||||| | |||| |||||||||  ||| |||| |||| | |||||||||||||| ||||    
T  29793742 aacaaaagataacataaagttaagttgttttcgtataagctataagttgagttcataagctatcttcgagagcttatgaaactaag 29793827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 38116146 - 38116089
Alignment:
Q  82 taagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaactta 139  Q
    |||||||||||||||||||||| |||||| ||||||||| |||||  | |||||||||    
T  38116146 taagttgttttcttaagttatcttggagaacttatgaaagtaagctggaaacaactta 38116089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 158
Target Start/End: Original strand, 39777620 - 39777741
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaac 136  Q
    ||||||||||||||  || |||||||| || ||||||  ||| |||| | ||||||||||||||||  || |||||||| | |||||||| |  |||| |    
T  39777620 tataacaaaagatagaataaagtcaaactgctttcatacaagctatatgatgttttcttaagttataatgaagagcttaaggaaataagctaaaaacatc 39777719  T
Q  137 ttattgacatgtcataatttgt 158  Q
    |||| ||||||| |||| ||||    
T  39777720 ttatggacatgttataaattgt 39777741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 7274065 - 7273998
Alignment:
Q  23 tatatgctattttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttt 91  Q
    |||||| |||||| ||||||||||||| | || ||||||||||||||||||  |||||||||| |||||    
T  7274065 tatatgttatttt-tataacaaaagatgaaataaagtcaaattgttttcatacaagttataagctgttt 7273998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 15360851 - 15360903
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgt 89  Q
    ||||||||||||||| || |||||||| ||||||||| |||| ||||||||||    
T  15360851 tataacaaaagataaaataaagtcaaactgttttcatataagctataagttgt 15360903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 49557098 - 49557154
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttc 93  Q
    ||||||||||||||| || |||| |||| || |||||||||| ||||||||||||||    
T  49557098 tataacaaaagataaaataaagttaaatagtattcatttaagctataagttgttttc 49557154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 4215334 - 4215417
Alignment:
Q  42 caaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||| ||||| || |||||||| ||||||||| |||  ||| ||| |||||| ||||||||||| ||||| ||||| |||||||    
T  4215334 caaatgataaaataaagtcaaactgttttcatataaactatgagtcgttttcgtaagttatccttgagagtttatgcaaataag 4215417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 125
Target Start/End: Complemental strand, 18434590 - 18434503
Alignment:
Q  38 ataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||||||||||||| || |||||||| || | |||| |||| |||| | | |||||  ||||||||||||||||||||  ||||||||    
T  18434590 ataacaaaagataaaataaagtcaaactgctctcatataagctatatgctattttcacaagttatcctggagagcttacaaaaataag 18434503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 126
Target Start/End: Complemental strand, 21254810 - 21254771
Alignment:
Q  87 tgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||||||| |||| ||||||||||||||||||||||    
T  21254810 tgttttcttaagctatcttggagagcttatgaaaataagc 21254771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 30257646 - 30257729
Alignment:
Q  43 aaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||| || |||||||| ||||| ||| |||| | |||||||||||| |||  |||||||||| ||||||  ||||||||    
T  30257646 aaaagataaaataaagtcaaactgtttccatataagctttaagttgttttcataaactatcctggagggcttatagaaataagc 30257729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 45990184 - 45990122
Alignment:
Q  23 tatatgctattttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagt 86  Q
    ||||||||||||| |||| |||||||||| || |||| ||||||||||||| |||| |||||||    
T  45990184 tatatgctatttt-tatatcaaaagataaaataaagtaaaattgttttcatataagctataagt 45990122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 49888730 - 49888813
Alignment:
Q  43 aaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||| || ||||  |||||||||| | |||| ||| |||||||||| |||| |||| | |||| |||||||||||||||    
T  49888730 aaaagataaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 49888813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 126
Target Start/End: Complemental strand, 51695601 - 51695519
Alignment:
Q  43 aaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||| || |||| ||||||||||| | |||||||| || ||||||| |||| |||| ||||||  ||||||||||||||    
T  51695601 aaaagataaaataaagt-aaattgttttcgtataagttatcagatgttttcataagctatcttggagaatttatgaaaataagc 51695519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 3223670 - 3223747
Alignment:
Q  82 taagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataatttgttt 160  Q
    |||||||||||| ||||||||||| | ||||||||| ||||||||    ||||||||||  ||||||||||| ||||||    
T  3223670 taagttgttttcgtaagttatcctagcgagcttatg-aaataagctgaaaacaacttataaacatgtcataagttgttt 3223747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 5150900 - 5150982
Alignment:
Q  43 aaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||| |||| || |||||||| | |||||||||||||| ||| |||||||| |||| |||| || |||||||||  |||||||    
T  5150900 aaaatataaaataaagtcaaactattttcatttaagttgtaatttgttttcataagctatcatgaagagcttatagaaataag 5150982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 5422029 - 5421955
Alignment:
Q  41 acaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagctta 115  Q
    ||||||||||| ||  ||||||||||||||| | |||| |||||||||||||  |||| |||| | |||||||||    
T  5422029 acaaaagataaaatatagtcaaattgttttcttataagctataagttgttttgataagctatcttagagagctta 5421955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 153
Target Start/End: Complemental strand, 12477394 - 12477284
Alignment:
Q  43 aaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattg 142  Q
    ||||||||| || |||||||| ||||||||| |||| |||| | | ||||  |||| |||| |||||||  |||| ||||||||    |||||||||| |    
T  12477394 aaaagataaaataaagtcaaactgttttcatgtaagatatatgcttttttaataagctatcatggagagtgtatggaaataagctgaaaacaacttatgg 12477295  T
Q  143 acatgtcataa 153  Q
    |||||||||||    
T  12477294 acatgtcataa 12477284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 27887193 - 27887115
Alignment:
Q  75 taagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataa 153  Q
    |||| |||||||||||||| |||  |||| |||||||| ||| ||||||||| |  ||||| |||| ||||||||||||    
T  27887193 taagctataagttgttttcataaactatcatggagagcatataaaaataagctaaaaacaatttatggacatgtcataa 27887115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 153
Target Start/End: Complemental strand, 28262709 - 28262616
Alignment:
Q  59 tcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataa 153  Q
    ||||||||||||||| ||| || |||| ||||||| |||||||||||  ||| |||||| |||||||| |  ||||| |||| ||||||| ||||    
T  28262709 tcaaattgttttcatctaa-ttctaagctgttttcataagttatcctatagaacttatggaaataagctaaaaacaatttatggacatgttataa 28262616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 28482315 - 28482257
Alignment:
Q  68 tttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||| |||| |||||| ||||||  ||||||||| ||||||||||| ||||||||||    
T  28482315 tttcatataagctataagctgtttttataagttatcttggagagcttacgaaaataagc 28482257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 33976163 - 33976221
Alignment:
Q  64 ttgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaat 122  Q
    |||||||| | ||||||||||||||||||| ||| ||||||| || |||||| ||||||    
T  33976163 ttgttttcgtataagttataagttgttttcataaattatcctagacagcttacgaaaat 33976221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 123
Target Start/End: Complemental strand, 34179985 - 34179899
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaata 123  Q
    ||||||||||||||| || ||||||||||||||| || |||| |||||  ||||||| |||  ||||||| | || ||||| |||||    
T  34179985 tataacaaaagataaaataaagtcaaattgttttaatctaagctataaactgttttcataaactatcctgaaaagtttatggaaata 34179899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 40394979 - 40394910
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||| ||||||||||||| ||| ||||||||||||||| |||   |||||  |||||||||||||||||||    
T  40394979 aagttaaattgttttcatataaattataagttgttttcataa-ccatcctatagagcttatgaaaataagc 40394910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 4078242 - 4078173
Alignment:
Q  57 agtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||| | ||||||| |||  |||||||||||||| |||| |||| ||| ||||| ||||||||||||    
T  4078242 agtcaaactattttcatataatctataagttgttttcataagctatcatggcgagctaatgaaaataagc 4078173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 158
Target Start/End: Original strand, 6981449 - 6981570
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaac 136  Q
    |||||||||| |||| |  ||||||||||  ||| || ||| ||||||| || |||| |||| ||| |||||||| ||||| ||||| ||    ||||||    
T  6981449 tataacaaaaaataaaacaaagtcaaatttgtttgatataaattataagctgatttcctaagctattctggagagtttatggaaatatgctgaaaacaac 6981548  T
Q  137 ttattgacatgtcataatttgt 158  Q
    ||||||||||| ||||| ||||    
T  6981549 ttattgacatgacataaattgt 6981570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 7472269 - 7472357
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||||||||  || |||| ||||||||||  | |||  |||||| ||||| | |||| |||| ||||||||||||||||||||||    
T  7472269 tataacaaaagatataat-aagttaaattgtttttgtataatctataagctgtttccataagctatcttggagagcttatgaaaataagc 7472357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 10581186 - 10581129
Alignment:
Q  41 acaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaag 98  Q
    ||||| ||||| || |||||||| | |||||||||||| |||||||||||||| ||||    
T  10581186 acaaaggataaaataaagtcaaacttttttcatttaagctataagttgttttcataag 10581129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 153
Target Start/End: Original strand, 21012750 - 21012863
Alignment:
Q  40 aacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaactta 139  Q
    |||||| ||||| || ||||| |  |||||||||||| | |||||| ||||||  ||||||||||| || |||||| ||||| ||||    |||| ||||    
T  21012750 aacaaacgataaaataaagtcgatctgttttcatttatgctataagatgttttgataagttatcctagaaagcttacgaaaacaagctgaaaacatctta 21012849  T
Q  140 ttgacatgtcataa 153  Q
    | ||||||||||||    
T  21012850 tcgacatgtcataa 21012863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 27140478 - 27140551
Alignment:
Q  80 tataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataa 153  Q
    |||||| ||||||  |||| |||| ||||||||||||| ||||||||    |||||||||| ||||||||||||    
T  27140478 tataagctgtttttataagctatcatggagagcttatgcaaataagctgaaaacaacttatggacatgtcataa 27140551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 36070199 - 36070275
Alignment:
Q  28 gctattttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcct 105  Q
    |||||||| ||||||||||||||| || |||| ||||||| |||   |||| |||||||||||||| |||||| ||||    
T  36070199 gctatttt-tataacaaaagataaaataaagttaaattgtcttcggataagctataagttgttttcataagttctcct 36070275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 37272694 - 37272625
Alignment:
Q  42 caaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagag 111  Q
    |||||| ||| || |||||||  ||||||||| |||| |||||| ||||||| ||| |||||||||||||    
T  37272694 caaaaggtaaaataaagtcaatctgttttcatataagctataagctgttttcataaattatcctggagag 37272625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 48282098 - 48282175
Alignment:
Q  44 aaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaa 121  Q
    |||||||| || |||||||| | ||||| |||||||| |||  ||||||| ||||||||  || ||||||||||||||    
T  48282098 aaagataaaataaagtcaaactattttcctttaagttttaaactgttttcataagttatgttgaagagcttatgaaaa 48282175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 11997101 - 11997053
Alignment:
Q  75 taagttataagttgttttcttaagttatcctggagagcttatgaaaata 123  Q
    |||| ||||| |||||||||||||||||||| ||||| ||||| |||||    
T  11997101 taagctataatttgttttcttaagttatcctagagaggttatggaaata 11997053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 14737818 - 14737782
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcat 73  Q
    ||||||||||||||| || ||||||||||||||||||    
T  14737818 tataacaaaagataaaataaagtcaaattgttttcat 14737782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 18420963 - 18420879
Alignment:
Q  41 acaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||||||||| || |||||||| |||| |||| |||| |||| | | |||||  |||||||| |||||||||||  ||||||||    
T  18420963 acaaaagataaaataaagtcaaaatgttctcatataagctatatgctattttcacaagttatcttggagagcttacaaaaataag 18420879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 30259600 - 30259476
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaa-gttatcctggagagcttatgaaaataagcgagcaacaa 135  Q
    |||||||||| |||| || |||||||| || ||| || |||| |||||| ||||| | ||| | |||| ||||||||||||| |||||||     |||||    
T  30259600 tataacaaaatataaaataaagtcaaactgctttgatataagctataagctgtttgcataaagctatcatggagagcttatggaaataagttgaaaacaa 30259501  T
Q  136 cttattgacatgtcataatttgttt 160  Q
     ||||||||||||| ||| ||||||    
T  30259500 tttattgacatgtcgtaagttgttt 30259476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 38651495 - 38651455
Alignment:
Q  86 ttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||| |||| ||||||||||||||||| |||||||||    
T  38651495 ttgttttcataagctatcctggagagcttataaaaataagc 38651455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 117
Target Start/End: Complemental strand, 47598490 - 47598454
Alignment:
Q  81 ataagttgttttcttaagttatcctggagagcttatg 117  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  47598490 ataagttgttttcataagctatcctggagagcttatg 47598454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 160
Target Start/End: Complemental strand, 10272538 - 10272421
Alignment:
Q  43 aaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattg 142  Q
    ||||||||| || |||||||||||||||| | |||| |||||||||||||| ||||  ||| ||||||| ||||||||||||||    |||||||||  |    
T  10272538 aaaagataaaattaagtcaaattgttttcgtataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaacaacttacag 10272439  T
Q  143 acatgtcataatttgttt 160  Q
    ||||||||||| ||||||    
T  10272438 acatgtcataagttgttt 10272421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 37588473 - 37588384
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||| ||||||||| ||||| |||||  |||||||| |||| |||||||||||||| |||||||| |||||||||||||| ||||||||    
T  37588473 tataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttattctggagagcttatggaaataagc 37588384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 152
Target Start/End: Complemental strand, 37526312 - 37526197
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaac 136  Q
    ||||| ||||||||| ||||| |||||  |||||||| |||| |||||||||||||| |||||| | |||||||||||||| ||||||||    |||| |    
T  37526312 tataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttgttctggagagcttatggaaataagctgaaaacagc 37526213  T
Q  137 ttattgacatgtcata 152  Q
    ||||| ||||||||||    
T  37526212 ttattaacatgtcata 37526197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 151
Target Start/End: Original strand, 10303758 - 10303867
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaac 136  Q
    ||||||||||||||| || ||||||||||||||||||||||    |||||||||||| ||||||    |||| |||||||||||||||||   |||||||    
T  10303758 tataacaaaagataaaataaagtcaaattgttttcatttaa--cctaagttgttttcataagtt---ttggaaagcttatgaaaataagctgacaacaac 10303852  T
Q  137 ttattgacatgtcat 151  Q
    |||| ||||||||||    
T  10303853 ttatggacatgtcat 10303867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 14295463 - 14295540
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagctt 114  Q
    ||||||||||||||| || |||||||| ||||||||| |||| |||||| ||||||| |||| |||||||||||||||    
T  14295463 tataacaaaagataaaataaagtcaaactgttttcatataagctataagctgttttcgtaagctatcctggagagctt 14295540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 153
Target Start/End: Complemental strand, 41957545 - 41957448
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataa 153  Q
    |||| ||||||||||||| ||||||||||| ||||||| |||| |||||| |||| ||||||||||||||     |||||||||| ||||||||||||    
T  41957545 aagttaaattgttttcatgtaagttataagctgttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacatgtcataa 41957448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 9202856 - 9202772
Alignment:
Q  42 caaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||||| || |||| ||||||||||||| ||||  ||||| ||||||| ||||||||| || ||| |||||||||||||||    
T  9202856 caaaagataaaataaagttaaattgttttcatataagcaataagctgttttcataagttatcttgaagaacttatgaaaataagc 9202772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 153
Target Start/End: Original strand, 36639479 - 36639595
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaac 136  Q
    ||||||||||||||| || || ||||| |||||||||  ||||||||   ||||||| |||| |||| || |||||||||||||||||| |   ||||||    
T  36639479 tataacaaaagataaaataaaatcaaaatgttttcatacaagttatagactgttttcataagctatcttgaagagcttatgaaaataagaggaaaacaac 36639578  T
Q  137 ttattgacatgtcataa 153  Q
    |||| |||| |||||||    
T  36639579 ttatggacacgtcataa 36639595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 152
Target Start/End: Complemental strand, 37690750 - 37690634
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttc-ttaagttatcctggagagcttatgaaaataagcgagcaacaa 135  Q
    ||||| ||||||||| ||||| |||||  |||||||| |||| |||||||||||||| | |||||||  ||||||||||||| ||||||||    ||||     
T  37690750 tataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataaagttattatggagagcttatggaaataagctgaaaacag 37690651  T
Q  136 cttattgacatgtcata 152  Q
    |||||| ||||||||||    
T  37690650 cttattaacatgtcata 37690634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 164
Target Start/End: Complemental strand, 12460113 - 12459987
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaac 136  Q
    ||||||||||||||| || |||| | ||||||||||  |||  |||||||||| |||  ||| |||| || ||||||||||||||||||| |  ||||||    
T  12460113 tataacaaaagataaaat-aagttatattgttttcaaataaactataagttgtcttcacaagctatcttgcagagcttatgaaaataagccaaaaacaac 12460015  T
Q  137 ttattgacatgtcataatttgttttcat 164  Q
     |||  ||||||||||| ||||||||||    
T  12460014 atatgaacatgtcataagttgttttcat 12459987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 125
Target Start/End: Complemental strand, 26390897 - 26390815
Alignment:
Q  42 caaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||||||||| || |||| ||| ||||||||| |||| |||||| || |||| ||||||||||||||||||||||| |||||||    
T  26390897 caaaagataaaat-aagttaaactgttttcatataagctataagatggtttcctaagttatcctggagagcttatggaaataag 26390815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 153
Target Start/End: Complemental strand, 18543291 - 18543194
Alignment:
Q  56 aagtcaaa-ttgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataa 153  Q
    |||||||| ||||||| || |||| |||||||||||||| |||| |||||||||||||||||| ||||||||    ||||||| || ||||||||||||    
T  18543291 aagtcaaacttgtttttatataagatataagttgttttcataagctatcctggagagcttatg-aaataagctgaaaacaactcatggacatgtcataa 18543194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 126
Target Start/End: Complemental strand, 42181213 - 42181116
Alignment:
Q  28 gctattttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||| ||||||||||||||| |  ||||||||| |||||||| |||| |||||||||||| |  |||||||||| ||||||| | | ||||||||    
T  42181213 gctatttt-tataacaaaagataaaacaaagtcaaatggttttcatataagctataagttgtttgcacaagttatcctagagagctcaaggaaataagc 42181116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 125
Target Start/End: Original strand, 12425524 - 12425616
Alignment:
Q  33 tttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||||||  ||||||||| || |||| ||||||||||| | |||| |||||| |||||||  ||| |||| |||||| ||||||||||||||    
T  12425524 tttatatagtaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcacaagctatcttggagaacttatgaaaataag 12425616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 16016515 - 16016455
Alignment:
Q  68 tttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcga 128  Q
    |||||| ||||||||||||||||||| | |||||||||| |||| ||||| ||||||||||    
T  16016515 tttcatataagttataagttgttttcattagttatcctgaagagattatgtaaataagcga 16016455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 18875318 - 18875398
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatg 117  Q
    |||| ||||||| || || ||||||||||| ||||||  |||||||||| ||||||  |||| ||||||||||||||||||    
T  18875318 tatatcaaaagacaaaataaagtcaaattgatttcatacaagttataagctgttttaataagatatcctggagagcttatg 18875398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 9215900 - 9215959
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagctta 115  Q
    ||||||||||||||||||||||||| |||| ||||||| | ||||||||| || ||||||    
T  9215900 aagtcaaattgttttcatttaagttgtaagctgttttcattagttatcctagatagctta 9215959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 31030224 - 31030154
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||| ||||| |||| |||| ||||||| |||||| |||| | |||||||||||||||| ||||||||    
T  31030224 aagtcaagttgttatcatataagctataagtagttttcctaagctgtcctggagagcttatggaaataagc 31030154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 38047966 - 38047888
Alignment:
Q  39 taacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatg 117  Q
    ||||||||||||| || |||||||||| ||||||| ||   |||| | ||||||| |||| ||||||||||||||||||    
T  38047966 taacaaaagataaaataaagtcaaattattttcatatatactatatgctgttttcataagctatcctggagagcttatg 38047888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 164
Target Start/End: Original strand, 2568653 - 2568742
Alignment:
Q  75 taagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataatttgttttcat 164  Q
    |||| |||||||||||||| |||| |||| ||||||||| |||||||||||| |  || |||||||  | |||||||||  |||||||||    
T  2568653 taagctataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaatatgtcataagctgttttcat 2568742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 4855647 - 4855711
Alignment:
Q  28 gctattttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttc 93  Q
    |||||||| |||||||||| |||| || |||| |||||||| |||| |||||||||||||||||||    
T  4855647 gctatttt-tataacaaaaaataaaataaagttaaattgttatcatataagttataagttgttttc 4855711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 28586879 - 28586790
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||||||||| || |||||||| ||||||||| ||| ||||||| ||||||    || |||||| ||||||||||  ||||||||    
T  28586879 tataacaaaagataaaataaagtcaaactgttttcatataaattataagctgttttgacgagctatcctagagagcttatcgaaataagc 28586790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 161
Target Start/End: Original strand, 34690831 - 34690954
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag-cgagcaacaa 135  Q
    ||||||||||||||| || |||||| | |  |||||| || | ||||||||||| || ||||  ||| ||||||||||||| ||||||| |||  |||||    
T  34690831 tataacaaaagataaaataaagtcacaatactttcatata-gctataagttgttctcataagccatcttggagagcttatggaaataagtcga-taacaa 34690928  T
Q  136 cttattgacatgtcataatttgtttt 161  Q
    ||||| ||||||||| ||||||||||    
T  34690929 cttatggacatgtcacaatttgtttt 34690954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 12975304 - 12975384
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatg 117  Q
    |||||||||  |||| || || ||||||||||||||| |||| |||||| ||| ||| |||| |||| |||||||||||||    
T  12975304 tataacaaagaataaaataaaatcaaattgttttcatataagctataagctgtgttcataagctatcttggagagcttatg 12975384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 17777905 - 17777945
Alignment:
Q  76 aagttataagttgttttcttaagttatcctggagagcttat 116  Q
    |||| ||||||||||||| ||||||||||||||||||||||    
T  17777905 aagtcataagttgttttcataagttatcctggagagcttat 17777945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 36539708 - 36539780
Alignment:
Q  42 caaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagctt 114  Q
    |||||||||| || |||||||  ||||||||| |||| |||||||||||||  |||||||| ||| |||||||    
T  36539708 caaaagataaaataaagtcaacctgttttcatataagctataagttgtttttataagttattctgaagagctt 36539780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 40120081 - 40120133
Alignment:
Q  41 acaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttc 93  Q
    ||||||||||| ||||| ||||||||||||||| |||| |||| |||||||||    
T  40120081 acaaaagataaaatcaaatcaaattgttttcatataagctataggttgttttc 40120133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 41277456 - 41277392
Alignment:
Q  44 aaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctgga 108  Q
    |||||||| || |||||||| ||||||||| ||||||| ||||||||||| |||| |||| ||||    
T  41277456 aaagataaaataaagtcaaactgttttcatataagttaaaagttgttttcataagctatcttgga 41277392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 2933764 - 2933709
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgtttt 92  Q
    ||||| ||||||||| || |||| ||| ||||||||| ||||||||||||||||||    
T  2933764 tataataaaagataaaatgaagttaaactgttttcatataagttataagttgtttt 2933709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 164
Target Start/End: Complemental strand, 13604934 - 13604835
Alignment:
Q  65 tgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataatttgttttcat 164  Q
    ||||||||| |||  | |||| ||||||| ||||||||| || ||||||||||||||||||     |||||| ||| ||||||||||||  |||||||||    
T  13604934 tgttttcatataaactttaagctgttttcataagttatcttgaagagcttatgaaaataagttgaaaacaacgtatggacatgtcataagctgttttcat 13604835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 41016158 - 41016225
Alignment:
Q  59 tcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||| ||||||||| |||| ||||||||||||||  |||  ||| |||| |||||||||||||||||    
T  41016158 tcaaactgttttcatataagctataagttgttttcacaagccatcatggaaagcttatgaaaataagc 41016225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 6582942 - 6582864
Alignment:
Q  40 aacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatga 118  Q
    |||||||| ||| || |||| ||||| ||||| | ||||||||||  ||||||| |||||| ||||| |||||||||||    
T  6582942 aacaaaagctaaaatgaagttaaatttttttcttataagttataaactgttttcataagttttcctgcagagcttatga 6582864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 7319382 - 7319452
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||| ||||||||||||| |||| |||||  ||||||| |||| |||| |||||| ||||| |||||||||    
T  7319382 aagttaaattgttttcatataagctataaactgttttcgtaagctatcttggagaacttataaaaataagc 7319452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 160
Target Start/End: Complemental strand, 10125786 - 10125708
Alignment:
Q  82 taagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataatttgttt 160  Q
    |||||| ||||| ||||||| | ||||||||||||||||||||||    |||| |||||  ||||||||||| ||||||    
T  10125786 taagttattttcataagttaccatggagagcttatgaaaataagctgaaaacaccttatcaacatgtcataagttgttt 10125708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 15003626 - 15003540
Alignment:
Q  38 ataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataa 124  Q
    |||||||||||||| || || ||||| | | ||||| |||| ||||||| |||||| |||| |||||  ||||||||||| ||||||    
T  15003626 ataacaaaagataaaataaaatcaaactctcttcatataagctataagtggttttcataagctatccaagagagcttatggaaataa 15003540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 15074819 - 15074773
Alignment:
Q  80 tataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||||||||| |||||||| ||||| |||||||| ||||||||    
T  15074819 tataagttgttttcataagttatactggaaagcttatggaaataagc 15074773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 32172613 - 32172699
Alignment:
Q  40 aacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||||||| || ||||||| |||||| ||| |||| |||||| ||||||| |||| |||| || ||| || ||| ||||||||    
T  32172613 aacaaaagataaaatgaagtcaagttgtttacatataagctataagctgttttcataagctatcatgaagaactaatggaaataagc 32172699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 34245676 - 34245770
Alignment:
Q  32 ttttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||| |||||| |||||||| |  || || || |||||| || |||| |||||||||||||  |||| |||| ||||||||| ||||||||||||    
T  34245676 ttttctataactaaagataaaacaaattccaactgttttaatataagctataagttgtttttataagctatcatggagagctgatgaaaataagc 34245770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 39105440 - 39105510
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||| ||||||||||| | |||| |||||  ||||||| |||| |||| |||||| |||||||||||||||    
T  39105440 aagttaaattgttttcgtataagctataatctgttttcataagctatcttggagaacttatgaaaataagc 39105510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 42583106 - 42583188
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaa 119  Q
    ||||||||||||| | || |||| ||||||||||| | ||||  ||||| ||||||| ||| ||||| |||||| ||||||||    
T  42583106 tataacaaaagatgaaataaagttaaattgttttcgtgtaagggataagctgttttcataatttatcgtggagaacttatgaa 42583188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 42646872 - 42646954
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaa 119  Q
    ||||||||| ||||| || |||| ||||||||||  |||||| |||||| ||||||| |||   ||| |||||||||||||||    
T  42646872 tataacaaaggataaaattaagttaaattgtttttgtttaagctataaggtgttttcataaacgatcttggagagcttatgaa 42646954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 11615449 - 11615497
Alignment:
Q  20 atatatatgctattttatataacaaaagataacatcaagtcaaattgttt 69  Q
    ||||||| |||||||| ||||||||||||||| || ||||||||||||||    
T  11615449 atatataagctatttt-tataacaaaagataaaataaagtcaaattgttt 11615497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 14599418 - 14599362
Alignment:
Q  37 tataacaaaa--gataacatcaagtcaaattgttttcatttaagttataagttgttt 91  Q
    ||||||||||  ||||| || |||||||| ||||||||| |||||||||||||||||    
T  14599418 tataacaaaactgataaaattaagtcaaactgttttcatataagttataagttgttt 14599362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 32849181 - 32849218
Alignment:
Q  80 tataagttgttttcttaagttatcctggagagcttatg 117  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  32849181 tatatgttgttttcttaagttatcctggagagcatatg 32849218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 39823238 - 39823173
Alignment:
Q  33 tttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaag 98  Q
    ||||||||||||||||||| || |||||||| |  |||||| |||| || ||||||||||| ||||    
T  39823238 tttatataacaaaagataaaataaagtcaaactactttcatataagctacaagttgttttcataag 39823173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 6587195 - 6587131
Alignment:
Q  62 aattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||||| | |||| |||||||||||||| |||| |||  |||||| ||| |||||||||||    
T  6587195 aattgttttcgtataagctataagttgttttcataagctatagtggagaacttgtgaaaataagc 6587131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 148
Target Start/End: Original strand, 8938622 - 8938714
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgt 148  Q
    |||||| ||||||||||| |||||||||||  |||||| |||  | | | |||||| |||||||||||||| |  |||||||||  |||||||    
T  8938622 aagtcacattgttttcatataagttataagcagttttcataaactttgcaggagagtttatgaaaataagctaaaaacaacttacagacatgt 8938714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 19138824 - 19138741
Alignment:
Q  45 aagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttat--cctggagagcttatgaaaataagc 126  Q
    |||||| ||| || ||||||||||||||  |||| |||||||||||||| |||| |||    ||||||||||||| ||||||||    
T  19138824 aagatatcataaattcaaattgttttcagataagctataagttgttttcataagctattatatggagagcttatggaaataagc 19138741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 19177439 - 19177499
Alignment:
Q  40 aacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagtt 100  Q
    |||| ||||||| || ||||| || ||||||||| |||| |||||||||||||| ||||||    
T  19177439 aacagaagataaaattaagtctaactgttttcatataagctataagttgttttcgtaagtt 19177499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 40205142 - 40205098
Alignment:
Q  82 taagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||||||| |||| |||||||||||||||||  ||||||||    
T  40205142 taagttgttttcataagctatcctggagagcttatagaaataagc 40205098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 1816532 - 1816629
Alignment:
Q  29 ctattttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||| ||||| ||||||||| || |||||||| ||||||  | |||| |||||||||||||| |||| ||| ||||||||||||| |||||||||    
T  1816532 ctattttttataataaaagataaaataaagtcaaactgtttttgtataagatataagttgttttcataagctatactggagagcttatcaaaataagc 1816629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 1125880 - 1125790
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgtttt-catttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||| |||||||| ||||| ||||| |||||| ||| |||| ||||| |||||||||||||||||| ||||||||||||| || |||||    
T  1125880 tataactaaagataaaatcaattcaaactgtttttcatataagctataacttgttttcttaagttatcttggagagcttatggaagtaagc 1125790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 14548823 - 14548745
Alignment:
Q  48 ataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||| ||||| |||||  |||||||| |||| |||||||||||||| |||||||| |||||||||||||| ||||||||    
T  14548823 ataaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttattctggagagcttatggaaataagc 14548745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 153
Target Start/End: Complemental strand, 1217894 - 1217797
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataa 153  Q
    |||| ||||||||||||| ||||||||||| ||||||| |||| |||||| |||| ||||||||| ||||     |||||||||| ||||||||||||    
T  1217894 aagttaaattgttttcatgtaagttataagctgttttcataagctatccttgagaacttatgaaagtaagatgaaaacaacttatggacatgtcataa 1217797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 153
Target Start/End: Complemental strand, 45433052 - 45432936
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaac 136  Q
    ||||| ||||||||| || |||| ||||||||||||| | || ||||| ||||||||  |||| |||||| |||||||||| ||||||||    ||||||    
T  45433052 tataagaaaagataaaatgaagttaaattgttttcatatgagctataaattgttttcacaagtcatcctgtagagcttatggaaataagctgaaaacaac 45432953  T
Q  137 ttattgacatgtcataa 153  Q
    ||||  |||||||||||    
T  45432952 ttatgaacatgtcataa 45432936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 237354 - 237443
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||| ||||||| || || | ||||| | ||||| ||||||||||||||||||| |||||||||||  |||||||| | ||||||||    
T  237354 tataacagaagataaaataaaataaaattatattcatgtaagttataagttgttttcataagttatcctatagagcttacggaaataagc 237443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 2318587 - 2318691
Alignment:
Q  23 tatatgctattttatataacaa-aagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagtta-tcctggagagcttatgaaa 120  Q
    |||||||| |||| |||||||| ||||||| ||||| ||||||||||||||| |||  |||||||||||||  ||||||| || ||||||||||||  ||    
T  2318587 tatatgct-ttttctataacaacaagataaaatcaaatcaaattgttttcatataaactataagttgtttttataagttattcttggagagcttatagaa 2318685  T
Q  121 ataagc 126  Q
    ||||||    
T  2318686 ataagc 2318691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 24887396 - 24887307
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||| |||||| || |||||||| ||| ||||| |||| || ||| ||||||| |||| ||||||||||||||||||  |||||||    
T  24887396 tataacaatagataaaataaagtcaaactgtattcatataagctaaaagctgttttcataagctatcctggagagcttatgggaataagc 24887307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 36646511 - 36646407
Alignment:
Q  20 atatatatgctattttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaa 119  Q
    ||||||| |||||||  ||| ||||||||||| || ||||  |||||||||||| |||||||||| |||||||| |||| |||||| ||||| ||||  |    
T  36646511 atatataagctatttc-tatgacaaaagataaaataaagtataattgttttcatataagttataacttgttttcataagctatcctagagagtttataga 36646413  T
Q  120 aataag 125  Q
    ||||||    
T  36646412 aataag 36646407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 48384536 - 48384479
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttct 94  Q
    ||||||| |||||||||| |||||||||||||| |||||||| |||||||| ||||||    
T  48384536 tataacagaagataacataaagtcaaattgtttccatttaagctataagttattttct 48384479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 125
Target Start/End: Original strand, 22232779 - 22232871
Alignment:
Q  33 tttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||||||||||| ||||| || |||||||| ||||||||| |||||  |||| | ||||| |||| |||| || || |||||||||||||||    
T  22232779 tttatataacaaatgataaaataaagtcaaactgttttcatataagtcgtaagctattttcataagctatcatgtagggcttatgaaaataag 22232871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 32555091 - 32555023
Alignment:
Q  40 aacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctgga 108  Q
    |||||||||||| || |||||||||| ||||| | |||| |||||||||||||| | ||||||||||||    
T  32555091 aacaaaagataaaataaagtcaaattattttcctataagctataagttgttttcatgagttatcctgga 32555023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 48397603 - 48397659
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttc 93  Q
    ||||| ||||||||| || ||||||||||||||| ||||||| ||||||||||||||    
T  48397603 tataataaaagataaaataaagtcaaattgtttttatttaagctataagttgttttc 48397659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 54775085 - 54775172
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||||||||||||| || ||||||||   |||| || ||| ||||||| ||||||| ||||||||| ||||||| |||||||||||||    
T  54775085 tataacaaaagataaaataaagtcaaaccatttttatataa-ttataagctgttttcgtaagttatcatggagagtttatgaaaataag 54775172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 126
Target Start/End: Original strand, 40665424 - 40665475
Alignment:
Q  75 taagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||||| ||||||| ||||||||| |||||||||||| |||||||||    
T  40665424 taagttataagatgttttcataagttatcttggagagcttataaaaataagc 40665475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 48364991 - 48364936
Alignment:
Q  38 ataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttc 93  Q
    |||||||||||||| || ||||||||||||||||||||| |  |||||||||||||    
T  48364991 ataacaaaagataaaataaagtcaaattgttttcatttacgccataagttgttttc 48364936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 21367643 - 21367713
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||| ||||||||||| | |||  |||||||||||||| |||| |||| |||||| |||||||||||||||    
T  21367643 aagttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagc 21367713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 51510263 - 51510217
Alignment:
Q  80 tataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||||||    
T  51510263 tataagttgttttcataagttatcgtggagagcttatggaaataagc 51510217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 126
Target Start/End: Original strand, 8933792 - 8933833
Alignment:
Q  85 gttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  8933792 gttgttttcataagttatcttggagagcttatgaaaataagc 8933833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 10101589 - 10101528
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaag 98  Q
    ||||||||||||||| || |||| ||||||||||||| |||| || ||||||||||| ||||    
T  10101589 tataacaaaagataaaataaagttaaattgttttcatataagataaaagttgttttcataag 10101528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 10212514 - 10212453
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaag 98  Q
    ||||||||||||||| || |||| ||||||||||||| |||| || ||||||||||| ||||    
T  10212514 tataacaaaagataaaataaagttaaattgttttcatataagataaaagttgttttcataag 10212453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 20192723 - 20192634
Alignment:
Q  33 tttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaat 122  Q
    ||||||||||||||||||| || ||||||||  |||||||| |||  |||||| ||||||  ||| |||| | |||||||||||| ||||    
T  20192723 tttatataacaaaagataaaataaagtcaaacagttttcatataatctataagctgtttttgtaacttattcgggagagcttatggaaat 20192634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 31337511 - 31337426
Alignment:
Q  40 aacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||||||||||| || |||||||| |||||| || ||||||||||||||| ||| |||| ||  || || ||||||| ||||||||    
T  31337511 aacaaaagataaaataaagtcaaactgtttttatataagttataagttgtattcataagctaatctagaaagcttatcaaaataag 31337426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 52440775 - 52440690
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaat 122  Q
    |||||||||| |||| ||||| ||||||||||||||  |||| |||||| | ||||| ||| ||||| || ||| |||||||||||    
T  52440775 tataacaaaatataaaatcaaatcaaattgttttcaaataagctataagctattttcataatttatcttgaagaacttatgaaaat 52440690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 52618979 - 52619048
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||| ||||||||||||| ||||||||||| |||||||  ||| |||| || ||||||| ||||||||||    
T  52618979 aagttaaattgttttcatataagttataagctgttttcacaagctatcttgaagagcttgtgaaaataag 52619048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 148
Target Start/End: Complemental strand, 21862285 - 21862177
Alignment:
Q  41 acaaaagataacat-caagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaactta 139  Q
    ||||||||||| || ||||||||||||||||||| |||| ||| ||| ||| || | || ||||  |||||||||||| ||||||||    |||||||||    
T  21862285 acaaaagataaaatacaagtcaaattgttttcatataagctatgagtagttctcattagctatctgggagagcttatggaaataagctgaaaacaactta 21862186  T
Q  140 ttgacatgt 148  Q
    | |||||||    
T  21862185 tggacatgt 21862177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 43875624 - 43875684
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttat 116  Q
    |||||||| |||| |||| |||| |||||||||||||| |||| |||| ||||||||||||    
T  43875624 aagtcaaactgttctcatataagctataagttgttttcataagctatcatggagagcttat 43875684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 51197848 - 51197793
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttc 93  Q
    ||||||||||||||  || ||| |||||||||||||| |||||||||||||||||||    
T  51197848 tataacaaaagatag-ataaagacaaattgttttcatataagttataagttgttttc 51197793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 40122864 - 40122750
Alignment:
Q  38 ataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaact 137  Q
    |||||||||||||| || |||||||| |||||||| | ||| |||||||||||||  |||| ||||||  | || | ||| |||||||| |  |||||||    
T  40122864 ataacaaaagataaaataaagtcaaactgttttca-taaagctataagttgtttttataagctatcctaaaaagttaatggaaataagctaaaaacaact 40122766  T
Q  138 tattgacatgtcataa 153  Q
    ||| || |||||||||    
T  40122765 tatagagatgtcataa 40122750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 16990255 - 16990161
Alignment:
Q  56 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtca 150  Q
    |||| ||| ||||||||| |||| ||||||||||||||||||  |||| || ||| ||| || ||||||||    |||||||||| |||||||||    
T  16990255 aagttaaactgttttcatataagatataagttgttttcttaaactatcatgaagaacttgtgcaaataagctgaaaacaacttatagacatgtca 16990161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 24158578 - 24158528
Alignment:
Q  75 taagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||| ||||| ||||||| |||| |||||||||||||||||| |||||||    
T  24158578 taagtaataagctgttttcataagctatcctggagagcttatggaaataag 24158528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 153
Target Start/End: Original strand, 24785212 - 24785278
Alignment:
Q  87 tgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataa 153  Q
    ||||||| |||| |||||| ||||||||||| |||||||| |  ||||||||||  |||||||||||    
T  24785212 tgttttcataagctatcctcgagagcttatgtaaataagctaaaaacaacttatgaacatgtcataa 24785278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 28306115 - 28306193
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagctta 115  Q
    ||||||||||  ||| || |||||||| ||||||||| ||||||| ||||||||||| |||| ||| | | ||||||||    
T  28306115 tataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctta 28306193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 33965611 - 33965522
Alignment:
Q  30 tattttatataacaaaagataacatcaagtcaaattgttttcattt--aagttataagttgttttcttaagttatcctggagagcttatg 117  Q
    |||||| ||||||||||| ||| || |||||||| ||||||||| |  ||| |||||| ||||||| |||| |||| || ||||||||||    
T  33965611 tattttttataacaaaaggtaaaataaagtcaaactgttttcatataaaagctataagatgttttcataagctatcttgaagagcttatg 33965522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 39602316 - 39602235
Alignment:
Q  43 aaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||||||||||| |||| ||||||||  | | ||||||||||| ||||||| |||| |||| | |||| ||||||||||||||    
T  39602316 aaaagataacataaagttaaattgttg-cgtataagttataagctgttttcataagctatctttgagaacttatgaaaataag 39602235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 14145869 - 14145958
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||| ||||||| || |||| ||||||||||| | || | |||||||| ||||| |||| |||| ||||   |||||||||||||||    
T  14145869 tataacagaagataaaataaagttaaattgttttcgtatatgctataagttattttcataagctatcttggattacttatgaaaataagc 14145958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 20502153 - 20502092
Alignment:
Q  65 tgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||||| || | |||||| ||||||| |||| ||||||| ||||||||||| |||||||    
T  20502153 tgttttcatatacgctataagctgttttcataagctatcctgaagagcttatgagaataagc 20502092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 23315591 - 23315672
Alignment:
Q  45 aagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||||| || |||||||||||||||||| || | |||||| ||||| | |||| ||| ||  |||||||||| ||||||||    
T  23315591 aagataaaataaagtcaaattgttttcatataggctataagatgtttccataagctattctaaagagcttatggaaataagc 23315672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 24280699 - 24280756
Alignment:
Q  68 tttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||||| ||| |||||| |||| || |||| |||| |||||||||||||||||||||    
T  24280699 tttcattcaagctataagctgttgtcataagctatcatggagagcttatgaaaataag 24280756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 34382937 - 34383022
Alignment:
Q  75 taagttataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcataatttgttt 160  Q
    ||||||||||||| ||||| |||| ||||||| | |||||| |||||||||     |||||||||| ||||| ||||||| |||||    
T  34382937 taagttataagttcttttcataagctatcctgaaaagcttaagaaaataagatgaaaacaacttatagacatatcataatctgttt 34383022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 41633385 - 41633450
Alignment:
Q  105 tggagagcttatgaaaataagcgagcaacaacttattgacatgtcataatttgttttcatcacctc 170  Q
    ||||||||||||||||||||||    ||||| |||| |||||||||| ||||||||| || |||||    
T  41633385 tggagagcttatgaaaataagctgaaaacaatttatagacatgtcatgatttgtttttataacctc 41633450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 115
Target Start/End: Complemental strand, 2100230 - 2100190
Alignment:
Q  75 taagttataagttgttttcttaagttatcctggagagctta 115  Q
    |||| |||||||||||||| ||||||||| |||||||||||    
T  2100230 taagctataagttgttttcataagttatcttggagagctta 2100190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 2719431 - 2719514
Alignment:
Q  42 caaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    ||||| |||| || |||| ||||||||||  |||||| |||||  ||||||| |||| |||| |||||| |||||||||||||||    
T  2719431 caaaatataaaataaagtgaaattgttttg-tttaagctataaactgttttcataagctatcttggagaacttatgaaaataagc 2719514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 2825149 - 2825193
Alignment:
Q  82 taagttgttttcttaagttatcctggagagcttatgaaaataagc 126  Q
    |||||| ||||| |||| |||| ||||||||||||||||||||||    
T  2825149 taagttattttcataagctatcttggagagcttatgaaaataagc 2825193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 3044344 - 3044284
Alignment:
Q  65 tgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    ||||||||| |||  |||||  |||||||||| | || |||||||||||||||||||||||    
T  3044344 tgttttcatataatctataacctgttttcttatgctaacctggagagcttatgaaaataag 3044284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 20669172 - 20669244
Alignment:
Q  80 tataagttgttttcttaagttatcctggagagcttatgaaaataagcgagcaacaacttattgacatgtcata 152  Q
    |||||| ||||||| |||| |||| ||||||||||||| |||||||||   |||| |||||  ||||||||||    
T  20669172 tataagctgttttcataagctatcttggagagcttatgtaaataagcggaaaacagcttatgaacatgtcata 20669244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 124
Target Start/End: Original strand, 22203430 - 22203474
Alignment:
Q  80 tataagttgttttcttaagttatcctggagagcttatgaaaataa 124  Q
    |||||||||||||| |||| |||| |||||| |||||||||||||    
T  22203430 tataagttgttttcataagctatcttggagaacttatgaaaataa 22203474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 26599137 - 26599185
Alignment:
Q  39 taacaaaagataacatcaagtcaaattgttttcatttaagttataagtt 87  Q
    ||||||||||||| || ||||||||| |||||||| |||| ||||||||    
T  26599137 taacaaaagataaaataaagtcaaatagttttcatataaggtataagtt 26599185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 40184 - 40271
Alignment:
Q  33 tttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaa 120  Q
    ||||||||  |||||||||  | ||||||| | |||| ||| |||| |||||||||||||| |||||||||||| |||||||||||||    
T  40184 tttatatagaaaaagataaattaaagtcaagtcgtttccatgtaagctataagttgttttcataagttatcctgaagagcttatgaaa 40271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 6750 - 6662
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||||||||| ||||  | ||||||||||||||||||  | |||| ||||||||||  ||||||||  || |||||||||| |||||||    
T  6750 tataacaaaaaataaacttaagtcaaattgttttcatagaggttaaaagttgttttgataagttattatgcagagcttatggaaataag 6662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 58210 - 58150
Alignment:
Q  33 tttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttc 93  Q
    |||||||||||||||||||||| ||||||||| || || || || | ||||||||||||||    
T  58210 tttatataacaaaagataacataaagtcaaatagtattaatatacgctataagttgttttc 58150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 27533 - 27589
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttc 93  Q
    ||||||| ||||||| || |||||||||||||||||| |||  ||||||||||||||    
T  27533 tataacagaagataaaataaagtcaaattgttttcatataaactataagttgttttc 27589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 116669 - 116581
Alignment:
Q  37 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataag 125  Q
    |||||||||| ||||  | ||||||||||||||||||  | |||| ||||||||||  ||||||||  || |||||||||| |||||||    
T  116669 tataacaaaaaataaacttaagtcaaattgttttcatagaggttaaaagttgttttgataagttattatgcagagcttatggaaataag 116581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University