View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8043_low_10 (Length: 315)
Name: NF8043_low_10
Description: NF8043
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8043_low_10 |
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Alignment Details
Target: chr1 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 19 - 297
Target Start/End: Original strand, 5568623 - 5568901
Alignment:
| Q |
19 |
agaacaggagtgttttggtgcatgaaaataacatgagagatttgttcaagatgatttactttcattcaaatgagttggaaagctcattgttttatcattt |
118 |
Q |
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| T |
5568623 |
agaacaggagtgttttggtgcatgaaaataacatgagagatttgttcaagatgatttactttcattcaaatgagttggaaagcccattgttttatcattt |
5568722 |
T |
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| Q |
119 |
gtcaagaggaattctaggtcattcttcataccaagaagctcattactttgaatgcagtgtcaagtgtttggttatttttaatgccttttgtgatggtatt |
218 |
Q |
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| T |
5568723 |
gtcaagaggaattctaggtcattcttcataccaagaagctcattactttgaatgcagtgtcaagtgtttggttatttttaatgccttttgtgatggtatt |
5568822 |
T |
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| Q |
219 |
gaacaaattctcctaaggcagaggcagaagttgttggagattgtgatttatgcattacgactcaaagtaacattggtga |
297 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |
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| T |
5568823 |
gaacaaattctcctaaggcagaggcagaagttgttggagattgtgatttatacattgcgactcaaagtaacattggtga |
5568901 |
T |
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