View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8045_low_1 (Length: 1111)
Name: NF8045_low_1
Description: NF8045
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8045_low_1 |
 | |
|
| [»] scaffold0425 (4 HSPs) |
| | |
|
| [»] scaffold1643 (1 HSPs) |
| | |
|
| [»] scaffold2053 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 1060; Significance: 0; HSPs: 48)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 1060; E-Value: 0
Query Start/End: Original strand, 14 - 1092
Target Start/End: Original strand, 6914198 - 6915277
Alignment:
| Q |
14 |
attattctcggccaaatgaaaattacagaaattcattaaaagaaagaggtactggaccagatgagccttcattagtgctgaagcagggaacttggatttt |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6914198 |
attattctcggccaaatgaaaattacagaaattcattaaaagaaagaggtactggaccagatgagccttcattagtgctgaagcagggaacttggatttt |
6914297 |
T |
|
| Q |
114 |
atgggaaacagtcacaagaataacgaagatgggattatatagtgaattatattaaaaagaattacaaacgcatcaagcctcagcagtaaactcatatcca |
213 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
6914298 |
atgggaaacagtcacaagaataacgaagatgggattatatagtgaattatattaaaaagaattacaaacgcatcaagcctcagcagtgaactcatatcca |
6914397 |
T |
|
| Q |
214 |
aatggggtgcctacaattaaaccaagcatgtgttttgtggatgtggaacaaacagacaacagcgacatccttctggttacgtgtaagagcagtggtcgtg |
313 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6914398 |
aatggggtgcctacaattaaaccaagcatgtgttttgtggatgtggaacaaacagacaacagtgacatccttctggttacgtgtaagagcagtggtcgtg |
6914497 |
T |
|
| Q |
314 |
ccattcatctggtcacgaatgggaatggatggcaccaacagcatggtttcaggtcacatgtaagctgtcagaaacagtattgcaaaatatatcagtatat |
413 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6914498 |
ccattcatctggtcacgaatgggaatggatggcaccaacagcatggtttcaggtcacatgtaagctgtcagaaacagtattgcaaaatatatcagtatat |
6914597 |
T |
|
| Q |
414 |
cacaaatacatgcactgttaagcctaaaaggctaaaacatagtatcttgtgc-ttactttactatttgagcaaaaattcactattgtttgactaaaataa |
512 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6914598 |
cacaaatacatgcactgttaagcctaaaaggctaaaacatagtatcttgtgcattactttactatttgagcaaaaattcactattgtttgactaaaataa |
6914697 |
T |
|
| Q |
513 |
acagattattgaatgtggtgcacctggatacaataacatctgatctcagcctcaaatcaagaaattgtcacggaagggatgtgacaaattctatgccaac |
612 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6914698 |
acagattattgaatgtggtgcacctggatacaataacatctgatctcagcctcaaatcaagaaattgtcacggaagggatgtgacaaattctatgccaac |
6914797 |
T |
|
| Q |
613 |
gctctccttgctccatttggtacaatttcttaagtaatggacagtcatgaatggacaaagtagaaagggagctgggtagatcctcctccggcaagcgttc |
712 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6914798 |
gctctccttgctccatttggtacaatttcttaagtaatggacagtcatgaatggacaaagtagaaagggagctgggtagatcctcctccggcaagcgttc |
6914897 |
T |
|
| Q |
713 |
aagacaagggcaatcttcaatatatagagattcaagcgaagtgaggtggagaagacccttgtagtttattattcttaggttggaacaatttgtcaactcg |
812 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
6914898 |
aagacaagggcaatcttcaatatatagagattcaagcgaagtgaggtggagaagacccttgtagtttattatttttaggttggaacaatttgtcaactcg |
6914997 |
T |
|
| Q |
813 |
agagatttaatagttgatggcagcagactctcctctggaaaggactccaagatattcaaatcatcactaacacataattgttttagagaattgagttgga |
912 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6914998 |
agagatttaatagttgatggcagcagactctcctctggaaaggactccaagatattcaaatcatcactaacacataattgttttagagaattgagttgga |
6915097 |
T |
|
| Q |
913 |
acaaaccccactcctctctagaagccgtcaagtttggacatctttctattcggaggctgcctaggttggaaggcaactgcctcccaaaaaatgattccag |
1012 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6915098 |
acaaaccccactcctctctagaagccgtcaagtttggacatctttctattcggaggctgcctaggttggaaggcaactgcctcccaaaaaatgattccag |
6915197 |
T |
|
| Q |
1013 |
ccatggacactcatacaacgcgagagaatgaagattggtgaacaattgtagtgtaaaaggaaatgaggaagagtgccaac |
1092 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6915198 |
ccatggacactcatacaacgcgagagaatgaagattggtgaacaattgtagtgtaaaaggaaatgaggaagagtgccaac |
6915277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 271 - 1093
Target Start/End: Original strand, 6242688 - 6243494
Alignment:
| Q |
271 |
aacagcgacatccttctggttacgtgtaagagcagtggtcgtgccattcatctggtcacgaatgggaatggatggcaccaacag--catggtttcaggtc |
368 |
Q |
| |
|
|||||| |||| ||| ||||| |||| |||||||||||| |||||||| | |||||||||||| |||||||| ||| ||| || |||||||||||||| |
|
|
| T |
6242688 |
aacagcaacatacttttggttgtgtgtgagagcagtggtcatgccattcgtttggtcacgaatgagaatggatcgcaacaagagagcatggtttcaggtc |
6242787 |
T |
|
| Q |
369 |
acatgtaagctgtcagaaacagtattgcaaaatatatcagtatatcacaaataca-tgcactgttaagcctaaaaggctaaaacatagtatcttgtgc-t |
466 |
Q |
| |
|
|||||||||| |||||||||| |||| || ||||||| ||||| ||| ||||||||| | | ||||| || ||||| |||||| | |
|
|
| T |
6242788 |
acatgtaagcagtcagaaacaccattgaaacatatatc--------acaaacacagtgcactgttcaacataaaa--------cacagtatgttgtgcat |
6242871 |
T |
|
| Q |
467 |
tacttt-actatttgagcaaaaattcactattgtttgactaaaataaacagattattgaatgtggtgcacctggatacaataacatctgatctcagcctc |
565 |
Q |
| |
|
|| ||| ||| ||| | ||||| |||| |||||||| | ||||||||||| |||||||| ||||||||| ||||||||||||| ||||| | |
|
|
| T |
6242872 |
tatttttactgtttaaaagaaaatatactaatgtttgacaactataaacagattggtgaatgtgctgcacctggctacaataacatct-----cagccgc |
6242966 |
T |
|
| Q |
566 |
aaatcaagaaattgtcacggaagggatgtgacaaattctatgccaacgctctccttgctccatttggtacaatttcttaagtaatggacagtcatgaatg |
665 |
Q |
| |
|
||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||| |
|
|
| T |
6242967 |
caatcaggaaattgtcacgttagggatgtgacaaattgtatgccaacgctctccttgctccttttggtacaactgcttaagtaatggacagtcatgaatt |
6243066 |
T |
|
| Q |
666 |
gacaaagtagaaagggagctgggtagatcctcctccggcaagcgttcaagacaagggcaatcttcaatatatagagattcaagcgaagtgaggtggagaa |
765 |
Q |
| |
|
|||||||||||||| ||| | |||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
6243067 |
gacaaagtagaaagagagataggtagaccctcctctggcaagctctcaagacaagggcaatcttcaatatatagagattcaagtgaagtgaggtggagaa |
6243166 |
T |
|
| Q |
766 |
gacccttgtagtttattattcttaggttggaacaatttgtcaactcgagagatttaatagttgatggcagcagactctcctctggaaaggactccaagat |
865 |
Q |
| |
|
|||||||| |||||||| || ||||| |||||||||| |||| || ||||| |||||| |||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
6243167 |
gacccttgcagtttattttttttaggcaggaacaatttttcaaatcaagagagttaatacttgatggcagcatactctcctctggaaaggactcgaagat |
6243266 |
T |
|
| Q |
866 |
attcaaatcatcactaacacataattgttttagagaattgagttggaacaaaccccactcctctctagaagccgtcaagtttggacatctttctattcgg |
965 |
Q |
| |
|
| ||||||||||||| || |||||||| ||||| ||||||||||||||||||||||||||| | |||||| |||| || || ||||||||||||||| |
|
|
| T |
6243267 |
ttcaaaatcatcactaagactgaattgtttcagagatttgagttggaacaaaccccactcctctattgaagccatcaaattagggcatctttctattcgg |
6243366 |
T |
|
| Q |
966 |
aggctgcctaggttggaaggcaactgcctcccaaaaaatgattccagccatggacactcatacaacgcgagagaatgaagattggtgaacaattgtagtg |
1065 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| || |||||| ||||||||| ||||||||||||||| ||||||| |
|
|
| T |
6243367 |
aggctgcctaggttggaaggcaactgcctcccgaaaaatgattccagcaatggacaatcgtacaacacgagagaattaagattggtgaacaagtgtagtg |
6243466 |
T |
|
| Q |
1066 |
taaaaggaaatgaggaagagtgccaact |
1093 |
Q |
| |
|
|||||| || ||||||||||||||||| |
|
|
| T |
6243467 |
caaaaggcaaggaggaagagtgccaact |
6243494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 271 - 1093
Target Start/End: Original strand, 6879882 - 6880693
Alignment:
| Q |
271 |
aacagcgacatccttctggttacgtgtaagagcagtggtcgtgccattcatctggtcacgaatgggaatggatggcaccaacag--catggtttcaggtc |
368 |
Q |
| |
|
|||||| |||| ||||| ||| ||||||||||||||||| |||||||||| |||||||||||| |||||||||||| ||| || |||||||||||||| |
|
|
| T |
6879882 |
aacagctacatacttctagttgtgtgtaagagcagtggtcatgccattcatttggtcacgaatgagaatggatggcaacaaaagagcatggtttcaggtc |
6879981 |
T |
|
| Q |
369 |
acatgtaagctgtcagaaacagtattgcaaaatatatcagtatatcacaaataca-tgcactgttaagcctaaaaggctaaaacatagtatcttgtgctt |
467 |
Q |
| |
|
|||||||||| |||||||| || ||||||| |||||||| |||| || ||||||||| | | |||||| |||||||||| || | |
|
|
| T |
6879982 |
acatgtaagcggtcagaaagagcattgcaacatatatca--------caaacaccgtgcactgttcaacataaaag--------atagtatcttatgaat |
6880065 |
T |
|
| Q |
468 |
acttt--actatttgagcaaaaattcactattgtttgactaaaataaacagattattgaatgtggtgcacctggatacaataacatctgatctcagcctc |
565 |
Q |
| |
|
| ||| ||||||| || ||||| |||| |||||||| | ||||||||||| |||||||||||||||| ||||||||||||| ||||||||| | |
|
|
| T |
6880066 |
aatttttactatttaagagaaaatatactaatgtttgacaagtataaacagattgggaaatgtggtgcacctggctacaataacatctcatctcagccgc |
6880165 |
T |
|
| Q |
566 |
aaatcaagaaattgtcacggaagggatgtgacaaattctatgccaacgctctccttgctccatttggtacaatttcttaagtaatggacagtcatgaatg |
665 |
Q |
| |
|
|||| ||||||||||| ||| ||||||| |||| |||||||||||||||||| |||| |||||||| | ||||| |||||| || ||||||||| |
|
|
| T |
6880166 |
ctatcaggaaattgtcacatcaggaatgtgactaattgtatgccaacgctctccttcctccttttggtacttctgcttaattaatgggcaatcatgaatg |
6880265 |
T |
|
| Q |
666 |
gacaaagtagaaagggagctgggtagatcctcctccggcaagcgttcaagacaagggcaatcttcaatatatagagattcaagcgaagtgaggtggagaa |
765 |
Q |
| |
|
||||||||||||||||| ||||||||| ||||||| ||||||| |||||||||||||| ||||||||| ||||||||||||| || || | |||||||| |
|
|
| T |
6880266 |
gacaaagtagaaagggaactgggtagaccctcctctggcaagctgtcaagacaagggcagtcttcaatacatagagattcaagtgaggtcatgtggagaa |
6880365 |
T |
|
| Q |
766 |
gacccttgtagtttattattcttaggttggaacaatttgtcaactcgagagatttaatagttgatggcagcagactctcctctggaaaggactccaagat |
865 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
6880366 |
gacccttgtagtttattattcttaggttggaacaatttgttaactcaagagatttcatagttgatggcagcagactctcctccggaaaggactccaagat |
6880465 |
T |
|
| Q |
866 |
attcaaatcatcactaacacataattgttttagagaattgagttggaacaaaccccactcctctctagaagccgtcaagtttggacatctttctattcgg |
965 |
Q |
| |
|
| ||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||| |||| || |||||| ||| |||| || |
|
|
| T |
6880466 |
ttccaaatcatcaccaacactgaattgtttcagagaattgagttggaacaaaccccactcctctctcgaagccatcaacttaggacatttttttatttgg |
6880565 |
T |
|
| Q |
966 |
aggctgcctaggttggaaggcaactgcctcccaaaaaatgattccagccatggacactcatacaacgcgagagaatgaagattggtgaacaattgtagtg |
1065 |
Q |
| |
|
||||| | ||||||||||||||||||||||||| ||||||| |||||||||||| | || |||||| |||||||| ||||||||||||||| || |||| |
|
|
| T |
6880566 |
aggctacataggttggaaggcaactgcctcccagaaaatgactccagccatggatagtcgtacaacatgagagaattaagattggtgaacaagtgcagtg |
6880665 |
T |
|
| Q |
1066 |
taaaaggaaatgaggaagagtgccaact |
1093 |
Q |
| |
|
|||||| || || |||||||||||||| |
|
|
| T |
6880666 |
gaaaaggcaaggaagaagagtgccaact |
6880693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 485 - 1092
Target Start/End: Original strand, 6139855 - 6140462
Alignment:
| Q |
485 |
aaaattcactattgtttgactaaaataaacagattattgaatgtggtgcacctggatacaataacatctgatctcagcctcaaatcaagaaattgtcacg |
584 |
Q |
| |
|
|||||| |||| |||||||| | ||||||||||| ||||||| ||||||||||| | |||||||||| ||||||||| ||||| |||||||| || |
|
|
| T |
6139855 |
aaaatttactaatgtttgacaactataaacagattggtgaatgttgtgcacctggaaaaaataacatctcatctcagccgtcaatcaggaaattgtgaca |
6139954 |
T |
|
| Q |
585 |
gaagggatgtgacaaattctatgccaacgctctccttgctccatttggtacaatttcttaagtaatggacagtcatgaatggacaaagtagaaagggagc |
684 |
Q |
| |
|
|||||||| ||| ||||| ||||||||||||| ||||||||| |||||||||| | ||| | ||||||||| |||||||||||||||||||||||||| | |
|
|
| T |
6139955 |
gaagggatatgagaaattgtatgccaacgctcgccttgctccttttggtacaactgcttgattaatggacaatcatgaatggacaaagtagaaagggaac |
6140054 |
T |
|
| Q |
685 |
tgggtagatcctcctccggcaagcgttcaagacaagggcaatcttcaatatatagagattcaagcgaagtgaggtggagaagacccttgtagtttattat |
784 |
Q |
| |
|
|||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |
|
|
| T |
6140055 |
tgggtagaccctcctctggcaagctctcaagacaagggcaatcttcaatatatagagattcaagtgaagtgaggtggagaagacccttgtagtttatttt |
6140154 |
T |
|
| Q |
785 |
tcttaggttggaacaatttgtcaactcgagagatttaatagttgatggcagcagactctcctctggaaaggactccaagatattcaaatcatcactaaca |
884 |
Q |
| |
|
| ||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||| | |
|
|
| T |
6140155 |
ttttaggtttgaacaatttgtcaactcaagagagttaatagttgatggcagcagactctcctctggaaaggattccaagatttcaaaatcatcactaaga |
6140254 |
T |
|
| Q |
885 |
cataattgttttagagaattgagttggaacaaaccccactcctctctagaagccgtcaagtttggacatctttctattcggaggctgcctaggttggaag |
984 |
Q |
| |
|
| |||||||| ||||| ||||||| ||||||||||||||||||| | |||||| |||| || || ||||||||||| |||||||||||||||||| ||| |
|
|
| T |
6140255 |
ctgaattgtttcagagatttgagtttgaacaaaccccactcctctattgaagccatcaaattagggcatctttctatccggaggctgcctaggttgcaag |
6140354 |
T |
|
| Q |
985 |
gcaactgcctcccaaaaaatgattccagccatggacactcatacaacgcgagagaatgaagattggtgaacaattgtagtgtaaaaggaaatgaggaaga |
1084 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| || |||||| ||||||||| ||||||| |||| || | ||||| |||||| || || ||||| |
|
|
| T |
6140355 |
gcaactgcctcccaaaaaacgattccagccatggacaatcgtacaacacgagagaattaagattgttgaataagtatagtgcaaaaggcaaggaagaaga |
6140454 |
T |
|
| Q |
1085 |
gtgccaac |
1092 |
Q |
| |
|
|||||||| |
|
|
| T |
6140455 |
gtgccaac |
6140462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 486 - 1092
Target Start/End: Original strand, 6256772 - 6257378
Alignment:
| Q |
486 |
aaattcactattgtttgactaaaataaacagattattgaatgtggtgcacctggatacaataacatctgatctcagcctcaaatcaagaaattgtcacgg |
585 |
Q |
| |
|
||||| |||| |||||||| | ||||||||||| ||||||| ||||||||| |||||||| ||||||||||||| | ||||| |||||| |||| |
|
|
| T |
6256772 |
aaatttactaatgtttgacaactataaacagattggtgaatgttgtgcacctgtctacaataaaatctgatctcagctgccaatcaggaaattatcacat |
6256871 |
T |
|
| Q |
586 |
aagggatgtgacaaattctatgccaacgctctccttgctccatttggtacaatttcttaagtaatggacagtcatgaatggacaaagtagaaagggagct |
685 |
Q |
| |
|
||||||||||| ||||| |||||||| |||| ||||||||| ||||||||| | ||||| ||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
6256872 |
aagggatgtgagaaattgtatgccaatgctcgccttgctccttttggtacagctgcttaattaatggacaatcatgaatcgacaaagtagaaagggagct |
6256971 |
T |
|
| Q |
686 |
gggtagatcctcctccggcaagcgttcaagacaagggcaatcttcaatatatagagattcaagcgaagtgaggtggagaagacccttgtagtttattatt |
785 |
Q |
| |
|
||||||| ||||||| ||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |
|
|
| T |
6256972 |
gggtagaccctcctctggcaagctatcaagacaaggacaatcttcaatatatagagattcaagtgaagtgaggtggagaagacccttgtagtttattttt |
6257071 |
T |
|
| Q |
786 |
cttaggttggaacaatttgtcaactcgagagatttaatagttgatggcagcagactctcctctggaaaggactccaagatattcaaatcatcactaacac |
885 |
Q |
| |
|
||||||| ||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||| || ||||| | ||||| ||||||| | |
|
|
| T |
6257072 |
gttaggtttgaacaatttgtcaactcaagagagttaatagttgatggcagcatactctcctctggaaaggattcgaagatttcaaaatcgtcactaagag |
6257171 |
T |
|
| Q |
886 |
ataattgttttagagaattgagttggaacaaaccccactcctctctagaagccgtcaagtttggacatctttctattcggaggctgcctaggttggaagg |
985 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||||||| | |||||| |||| || || ||||||||||| |||||||||||||||||| |||| |
|
|
| T |
6257172 |
tgaattgtttcagagatttgagttggaacaaaccccactcctctattgaagccatcaaattagggcatctttctatccggaggctgcctaggttgcaagg |
6257271 |
T |
|
| Q |
986 |
caactgcctcccaaaaaatgattccagccatggacactcatacaacgcgagagaatgaagattggtgaacaattgtagtgtaaaaggaaatgaggaagag |
1085 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| || |||||| ||||||||| ||||||||||||||| ||||||| |||||| || || |||||| |
|
|
| T |
6257272 |
caactgcctcccaaaaaacgattccagccatggacaatcgtacaacacgagagaattaagattggtgaacaagtgtagtgcaaaaggcaaggaagaagag |
6257371 |
T |
|
| Q |
1086 |
tgccaac |
1092 |
Q |
| |
|
||||||| |
|
|
| T |
6257372 |
tgccaac |
6257378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 509 - 1092
Target Start/End: Original strand, 6263275 - 6263858
Alignment:
| Q |
509 |
ataaacagattattgaatgtggtgcacctggatacaataacatctgatctcagcctcaaatcaagaaattgtcacggaagggatgtgacaaattctatgc |
608 |
Q |
| |
|
||||||||||| ||||||| |||||||||| ||||||||||||| |||||||| | ||||| ||||||||||| |||| |||||| ||||| ||||| |
|
|
| T |
6263275 |
ataaacagattggtgaatgttgtgcacctggctacaataacatctcatctcagctgccaatcaggaaattgtcacataaggaatgtgagaaattgtatgc |
6263374 |
T |
|
| Q |
609 |
caacgctctccttgctccatttggtacaatttcttaagtaatggacagtcatgaatggacaaagtagaaagggagctgggtagatcctcctccggcaagc |
708 |
Q |
| |
|
|||||||| ||||||||| |||||||||| | ||||| ||||||||| |||||||| ||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
6263375 |
caacgctcgccttgctccgtttggtacaactgcttaattaatggacaatcatgaattgacaaagtagaaagggagctgggtagaccctcctctggcaagc |
6263474 |
T |
|
| Q |
709 |
gttcaagacaagggcaatcttcaatatatagagattcaagcgaagtgaggtggagaagacccttgtagtttattattcttaggttggaacaatttgtcaa |
808 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||| |
|
|
| T |
6263475 |
tctcaagacaagggcaatcttcaatatatagagatttgagtgaagtgaggtggagaagacccttgcagtttatttttcttaggttgggacaatttgtcaa |
6263574 |
T |
|
| Q |
809 |
ctcgagagatttaatagttgatggcagcagactctcctctggaaaggactccaagatattcaaatcatcactaacacataattgttttagagaattgagt |
908 |
Q |
| |
|
||| | ||| |||||| |||||||||||| |||||||||||||||||| |||||||| | ||||||||||||| || |||||||| ||||| |||||| |
|
|
| T |
6263575 |
ctcaaaagagttaatacttgatggcagcatactctcctctggaaaggattccaagatttcaaaatcatcactaagactgaattgtttcagagatttgagt |
6263674 |
T |
|
| Q |
909 |
tggaacaaaccccactcctctctagaagccgtcaagtttggacatctttctattcggaggctgcctaggttggaaggcaactgcctcccaaaaaatgatt |
1008 |
Q |
| |
|
||||||||||||||||||||| | | |||| |||| || | |||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||| |
|
|
| T |
6263675 |
tggaacaaaccccactcctctattgtagccatcaaattacggcatctttctattcggaggctgcttaggttggaaggcaactgcctctcaaaaaacgatt |
6263774 |
T |
|
| Q |
1009 |
ccagccatggacactcatacaacgcgagagaatgaagattggtgaacaattgtagtgtaaaaggaaatgaggaagagtgccaac |
1092 |
Q |
| |
|
||||||| ||||| | |||||| ||||||||| ||||||||||||||| ||||||| ||||||||| || ||||||||||||| |
|
|
| T |
6263775 |
ccagccacggacaattgtacaacacgagagaattaagattggtgaacaaatgtagtgcaaaaggaaaggaagaagagtgccaac |
6263858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 317; E-Value: 1e-178
Query Start/End: Original strand, 492 - 1092
Target Start/End: Original strand, 6897664 - 6898264
Alignment:
| Q |
492 |
actattgtttgactaaaataaacagattattgaatgtggtgcacctggatacaataacatctgatctcagcctcaaatcaagaaattgtcacggaaggga |
591 |
Q |
| |
|
|||| |||||||| | ||||||||||| |||||||||||||||||| || |||||||||| ||||||||| | ||||| ||||||||||| ||| | |
|
|
| T |
6897664 |
actaatgtttgacaagtataaacagattggtgaatgtggtgcacctggctataataacatctcatctcagccgccaatcaggaaattgtcacatcaggaa |
6897763 |
T |
|
| Q |
592 |
tgtgacaaattctatgccaacgctctccttgctccatttggtacaatttcttaagtaatggacagtcatgaatggacaaagtagaaagggagctgggtag |
691 |
Q |
| |
|
|||||| |||| ||||||||| |||||||| |||| |||||||| | ||||| |||||| || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
6897764 |
tgtgactaattgtatgccaacactctccttcctccttttggtacttctgcttaattaatgggcaatcatgaatggacaaagtagaaagggagctgggtag |
6897863 |
T |
|
| Q |
692 |
atcctcctccggcaagcgttcaagacaagggcaatcttcaatatatagagattcaagcgaagtgaggtggagaagacccttgtagtttattattcttagg |
791 |
Q |
| |
|
| |||||||||||||| ||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
6897864 |
acactcctccggcaagctctcaaggaaagggcagtcttcaatatatagagattcaagtgaagtgaggtggagaagacccttatagtttattattcttagg |
6897963 |
T |
|
| Q |
792 |
ttggaacaatttgtcaactcgagagatttaatagttgatggcagcagactctcctctggaaaggactccaagatattcaaatcatcactaacacataatt |
891 |
Q |
| |
|
|||||||||||||| ||||| |||||||| |||||||||||||||||||||| ||| ||||||||||||||||| | ||||||||||| |||| || | |
|
|
| T |
6897964 |
ttggaacaatttgttaactcaagagatttcatagttgatggcagcagactcttctccggaaaggactccaagatttcaaaatcatcacttacactgaact |
6898063 |
T |
|
| Q |
892 |
gttttagagaattgagttggaacaaaccccactcctctctagaagccgtcaagtttggacatctttctattcggaggctgcctaggttggaaggcaactg |
991 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| |||||| |||| || ||||||||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
6898064 |
gtttcagagaattgagttggaacaaaccccactcctctctcgaagccatcaatttaggacatctttctattcggaggctgcataggttgcaaggcaactg |
6898163 |
T |
|
| Q |
992 |
cctcccaaaaaatgattccagccatggacactcatacaacgcgagagaatgaagattggtgaacaattgtagtgtaaaaggaaatgaggaagagtgccaa |
1091 |
Q |
| |
|
||||| |||| |||||||||||||||| || |||||| | ||||||||||||||||||||||| || |||| ||| || || ||||||||||||||| |
|
|
| T |
6898164 |
cctccagcaaaacgattccagccatggactatcgtacaacaccagagaatgaagattggtgaacaagtgcagtgcaaatggcaaggaggaagagtgccaa |
6898263 |
T |
|
| Q |
1092 |
c |
1092 |
Q |
| |
|
| |
|
|
| T |
6898264 |
c |
6898264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 509 - 1088
Target Start/End: Complemental strand, 13275840 - 13275261
Alignment:
| Q |
509 |
ataaacagattattgaatgtggtgcacctggatacaataacatctgatctcagcctcaaatcaagaaattgtcacggaagggatgtgacaaattctatgc |
608 |
Q |
| |
|
||||||||||| ||||| | ||||||||||| | |||||||||| ||||||||| ||||| |||||||| || |||||||| ||| ||||| ||||| |
|
|
| T |
13275840 |
ataaacagattggtgaatatcgtgcacctggaaaaaataacatctcatctcagccgtcaatcaggaaattgtgacagaagggatatgagaaattgtatgc |
13275741 |
T |
|
| Q |
609 |
caacgctctccttgctccatttggtacaatttcttaagtaatggacagtcatgaatggacaaagtagaaagggagctgggtagatcctcctccggcaagc |
708 |
Q |
| |
|
||||||| ||||||||| |||||||||| | ||||| ||||||||| |||||||||||||||||||||||||| ||||||||| ||||||| ||||||| |
|
|
| T |
13275740 |
caacgcttgccttgctccttttggtacaactgcttaattaatggacaatcatgaatggacaaagtagaaagggaactgggtagaccctcctctggcaagc |
13275641 |
T |
|
| Q |
709 |
gttcaagacaagggcaatcttcaatatatagagattcaagcgaagtgaggtggagaagacccttgtagtttattattcttaggttggaacaatttgtcaa |
808 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
13275640 |
tctcaagacaagggcaatcttcaatatatagagattcaagtgaagtgaggtggagaagacccttgtagtttatttttcttaggtttgaacaatttgtcaa |
13275541 |
T |
|
| Q |
809 |
ctcgagagatttaatagttgatggcagcagactctcctctggaaaggactccaagatattcaaatcatcactaacacataattgttttagagaattgagt |
908 |
Q |
| |
|
||| ||||| ||||||||||||||||||| |||||| |||||||||||||| ||||| | ||||||||||||| || |||||||| ||||| |||||| |
|
|
| T |
13275540 |
ctcaagagagttaatagttgatggcagcatactctcttctggaaaggactcaaagatttcaaaatcatcactaagactgaattgtttcagagatttgagt |
13275441 |
T |
|
| Q |
909 |
tggaacaaaccccactcctctctagaagccgtcaagtttggacatctttctattcggaggctgcctaggttggaaggcaactgcctcccaaaaaatgatt |
1008 |
Q |
| |
|
| ||||||||||||||||||| | | |||| |||| || | |||||||||||||||||||||| |||||||||||||||||||||| |||||| |||| |
|
|
| T |
13275440 |
ttgaacaaaccccactcctctattgtagccatcaaattacggcatctttctattcggaggctgcttaggttggaaggcaactgcctctaaaaaaacgatt |
13275341 |
T |
|
| Q |
1009 |
ccagccatggacactcatacaacgcgagagaatgaagattggtgaacaattgtagtgtaaaaggaaatgaggaagagtgc |
1088 |
Q |
| |
|
||||||| ||||| | |||||| ||||||||| ||||||||||||||| ||||||| |||||| || || ||||||||| |
|
|
| T |
13275340 |
ccagccacggacaattgtacaacacgagagaattaagattggtgaacaaatgtagtgcaaaaggcaaggaagaagagtgc |
13275261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 446 - 1092
Target Start/End: Complemental strand, 6593852 - 6593206
Alignment:
| Q |
446 |
taaaacatagtatcttgtgc-ttactttactatttgagcaaaaattcactattgtttgactaaaataaacagattattgaatgtggtgcacctggataca |
544 |
Q |
| |
|
|||||||||||||||||||| ||| | || |||||| || |||||||| | | |||||| | ||||||| ||| |||||| ||||||||||| |||| |
|
|
| T |
6593852 |
taaaacatagtatcttgtgcattattgtatgatttga-cagaaattcacaaatctttgacaagtataaacaaattggtgaatgcggtgcacctggctaca |
6593754 |
T |
|
| Q |
545 |
ataacatctgatctcagcctcaaatcaagaaattgtcacggaagggatgtgacaaattctatgccaacgctctccttgctccatttggtacaatttctta |
644 |
Q |
| |
|
|||||| || ||| || || | ||||| |||||||| || ||| ||||||| |||| |||||||| |||| |||| |||||||||||||| | |||| |
|
|
| T |
6593753 |
ataacagctcatcccaaccgctaatcaggaaattgttacatcaggaatgtgactaattttatgccaatgctcgccttcctccatttggtacagctgctta |
6593654 |
T |
|
| Q |
645 |
agtaatggacagtcatgaatggacaaagtagaaagggagctgggtagatcctcctccggcaagcgttcaagacaagggcaatcttcaatatatagagatt |
744 |
Q |
| |
|
| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||| ||||||||| ||||||||| |
|
|
| T |
6593653 |
attaatgggcagtcatgaatggacaaagtagaaagggagctgggtagaccctcctctggcaagctgtcaagacaagggcagtcttcaatacatagagatt |
6593554 |
T |
|
| Q |
745 |
caagcgaagtgaggtggagaagacccttgtagtttattattcttaggttggaacaatttgtcaactcgagagatttaatagttgatggcagcagactctc |
844 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||| |
|
|
| T |
6593553 |
caagtgaagtgaggtggagaagacccttgtagtttatttttcttaggttggaacaatttgttaactcaaaggatttaatagttgatggaagcagactctc |
6593454 |
T |
|
| Q |
845 |
ctctggaaaggactccaagatattcaaatcatcactaacacataattgttttagagaattgagttggaacaaaccccactcctctctagaagccgtcaag |
944 |
Q |
| |
|
||| ||||||||||||||||| | |||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| |||||| | || |
|
|
| T |
6593453 |
ctccggaaaggactccaagatttgaaaatcatcactaacactgaattgtttcagagaatcgagttggaacaaaccccactcctctctcgaagccattaat |
6593354 |
T |
|
| Q |
945 |
tttggacatctttctattcggaggctgcctaggttggaaggcaactgcctcccaaaaaatgattccagccatggacactcatacaacgcgagagaatgaa |
1044 |
Q |
| |
|
|| ||||||||||||||||||||||||| ||||||||||||||||||||| || |||| || | ||||||||||| || ||||| ||||||||| || |
|
|
| T |
6593353 |
ttaggacatctttctattcggaggctgcataggttggaaggcaactgcctgcctgaaaacgaccctagccatggacaatcgtacaaaacgagagaattaa |
6593254 |
T |
|
| Q |
1045 |
gattggtgaacaattgtagtgtaaaaggaaatgaggaagagtgccaac |
1092 |
Q |
| |
|
||||||||| ||| ||||| | |||||| || |||||||||||||||| |
|
|
| T |
6593253 |
gattggtgagcaagtgtagagcaaaaggcaaggaggaagagtgccaac |
6593206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 485 - 1092
Target Start/End: Original strand, 6166465 - 6167073
Alignment:
| Q |
485 |
aaaattcactattgtttgactaaaat-aaacagattattgaatgtggtgcacctggatacaataacatctgatctcagcctcaaatcaagaaattgtcac |
583 |
Q |
| |
|
|||||| |||| |||||||| | ||| ||||||||| |||||||||||||||||| ||||||||||||| || ||||| | ||||| ||||||||||| |
|
|
| T |
6166465 |
aaaatttactaatgtttgacaacaattaaacagattggtgaatgtggtgcacctggctacaataacatctcatatcagctgccaatcaggaaattgtcac |
6166564 |
T |
|
| Q |
584 |
ggaagggatgtgacaaattctatgccaacgctctccttgctccatttggtacaatttcttaagtaatggacagtcatgaatggacaaagtagaaagggag |
683 |
Q |
| |
|
||| ||||||| |||| |||||| ||| |||||||||||| |||||||||| ||||||||||||||||| ||| |||| ||||||||||| ||||| |
|
|
| T |
6166565 |
atcaggaatgtgactaattgtatgcctacgttctccttgctccttttggtacaacttcttaagtaatggacaatcacgaattgacaaagtagacagggat |
6166664 |
T |
|
| Q |
684 |
ctgggtagatcctcctccggcaagcgttcaagacaagggcaatcttcaatatatagagattcaagcgaagtgaggtggagaagacccttgtagtttatta |
783 |
Q |
| |
|
||||||||| |||| || ||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||| |||||||||||| |
|
|
| T |
6166665 |
ctgggtagaccctcatctggcaagctctcaagacaagggcaatcatcaatatatagagattcaagtgaagtgaggtggaaaagaccgttgtagtttattt |
6166764 |
T |
|
| Q |
784 |
ttcttaggttggaacaatttgtcaactcgagagatttaatagttgatggcagcagactctcctctggaaaggactccaagatattcaaatcatcactaac |
883 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| ||||| |||||||||||| | |||||| ||| ||| | | ||||| | ||||||||||||| |
|
|
| T |
6166765 |
ttcttaggttggaacaatttgtcaactcaagagaggtaatacttgatggcagcatagtctcctttggcaagaatgcgaagatttcaaaatcatcactaag |
6166864 |
T |
|
| Q |
884 |
acataattgttttagagaattgagttggaacaaaccccactcctctctagaagccgtcaagtttggacatctttctattcggaggctgcctaggttggaa |
983 |
Q |
| |
|
|| ||||||||| ||||| ||||||| ||||||||||||||||||| | |||||| |||| || || ||||||||||| |||||||||||||||||| || |
|
|
| T |
6166865 |
acttaattgtttcagagatttgagtttgaacaaaccccactcctctattgaagccatcaaattagggcatctttctatccggaggctgcctaggttgcaa |
6166964 |
T |
|
| Q |
984 |
ggcaactgcctcccaaaaaatgattccagccatggacactcatacaacgcgagagaatgaagattggtgaacaattgtagtgtaaaaggaaatgaggaag |
1083 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||||| || |||||| ||||||||| ||||||| |||| | ||||||| |||||| || || |||| |
|
|
| T |
6166965 |
ggcaactgcctcccaaaaaacgattccagcaatggacaatcgtacaacacgagagaattaagattgttgaatacgtgtagtgcaaaaggcaaggaagaag |
6167064 |
T |
|
| Q |
1084 |
agtgccaac |
1092 |
Q |
| |
|
||||||||| |
|
|
| T |
6167065 |
agtgccaac |
6167073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 485 - 938
Target Start/End: Original strand, 6235616 - 6236069
Alignment:
| Q |
485 |
aaaattcactattgtttgactaaaataaacagattattgaatgtggtgcacctggatacaataacatctgatctcagcctcaaatcaagaaattgtcacg |
584 |
Q |
| |
|
|||||| |||| |||||||| | ||||||||||| |||||||||||||||| ||||||||||||| |||||||| | ||||| ||||||||||| |
|
|
| T |
6235616 |
aaaatttactaatgtttgacaagtataaacagattgggaaatgtggtgcacctggctacaataacatctcatctcagctgccaatcaggaaattgtcaca |
6235715 |
T |
|
| Q |
585 |
gaagggatgtgacaaattctatgccaacgctctccttgctccatttggtacaatttcttaagtaatggacagtcatgaatggacaaagtagaaagggagc |
684 |
Q |
| |
|
|||| |||||| ||||| ||||||||||||||||||||||| |||||||||| | ||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6235716 |
taaggaatgtgagaaattgtatgccaacgctctccttgctccttttggtacaactgcttaattaatggacagtcatgaatggacaaagtagaaagggaga |
6235815 |
T |
|
| Q |
685 |
tgggtagatcctcctccggcaagcgttcaagacaagggcaatcttcaatatatagagattcaagcgaagtgaggtggagaagacccttgtagtttattat |
784 |
Q |
| |
|
|||||||| ||||||| ||||||| |||| |||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| | |
|
|
| T |
6235816 |
tgggtagaccctcctctggcaagctctcaaaacaaggacagtcttcaatatatagagattcaagtgaagtgaggtggagaagacccttgtagttgatttt |
6235915 |
T |
|
| Q |
785 |
tcttaggttggaacaatttgtcaactcgagagatttaatagttgatggcagcagactctcctctggaaaggactccaagatattcaaatcatcactaaca |
884 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||| |||||||| | ||||||||||||||| |
|
|
| T |
6235916 |
tcttaggttggaacaatttgtcaactcaagagagttaatagttgatggcagcatactctcctctggaaaggattccaagatttcaaaatcatcactaaca |
6236015 |
T |
|
| Q |
885 |
cataattgttttagagaattgagttggaacaaaccccactcctctctagaagcc |
938 |
Q |
| |
|
| |||||||||| ||| ||||||||||||||||||||||||||||| |||||| |
|
|
| T |
6236016 |
ctcaattgttttaaagatttgagttggaacaaaccccactcctctctcgaagcc |
6236069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 262; E-Value: 1e-145
Query Start/End: Original strand, 591 - 1092
Target Start/End: Complemental strand, 6724433 - 6723932
Alignment:
| Q |
591 |
atgtgacaaattctatgccaacgctctccttgctccatttggtacaatttcttaagtaatggacagtcatgaatggacaaagtagaaagggagctgggta |
690 |
Q |
| |
|
||||||| |||| |||||||| |||| ||| |||| |||||||| | ||||| |||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6724433 |
atgtgactaattgtatgccaaagctcagcttcctccttttggtacttctgcttaattaatgggcagtcatgaatggacaaagtagaaagggagctgggta |
6724334 |
T |
|
| Q |
691 |
gatcctcctccggcaagcgttcaagacaagggcaatcttcaatatatagagattcaagcgaagtgaggtggagaagacccttgtagtttattattcttag |
790 |
Q |
| |
|
|| ||||||| ||||||| |||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
6724333 |
gaccctcctctggcaagctgtcaagacaagggcagtcttcaatacatagagattcaagtgaagtgaggtggagaagacccttgtagtttatttttcttag |
6724234 |
T |
|
| Q |
791 |
gttggaacaatttgtcaactcgagagatttaatagttgatggcagcagactctcctctggaaaggactccaagatattcaaatcatcactaacacataat |
890 |
Q |
| |
|
||||||||||||||| ||||| | ||||||||||||||||| |||||||||||||| ||||||||||| ||||| | |||||||||||||||| ||| |
|
|
| T |
6724233 |
gttggaacaatttgttaactcaaaggatttaatagttgatggaagcagactctcctccggaaaggactctaagatttgaaaatcatcactaacactgaat |
6724134 |
T |
|
| Q |
891 |
tgttttagagaattgagttggaacaaaccccactcctctctagaagccgtcaagtttggacatctttctattcggaggctgcctaggttggaaggcaact |
990 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||||||||| |||||| | || || ||||||||||||||||||||||||| |||| ||||||| |||| |
|
|
| T |
6724133 |
tgtttcagagaatcgagttggaacaaaccccactcctctctcgaagccattaatttaggacatctttctattcggaggctgcataggctggaaggtaact |
6724034 |
T |
|
| Q |
991 |
gcctcccaaaaaatgattccagccatggacactcatacaacgcgagagaatgaagattggtgaacaattgtagtgtaaaaggaaatgaggaagagtgcca |
1090 |
Q |
| |
|
|||| || ||||| || |||||| |||||| || ||||| ||||||||| ||||||||||| ||| ||||| | |||||| || |||||||||||||| |
|
|
| T |
6724033 |
gcctgccgaaaaacgactccagcagtggacaatcgtacaaaacgagagaattaagattggtgagcaagtgtagagcaaaaggcaaggaggaagagtgcca |
6723934 |
T |
|
| Q |
1091 |
ac |
1092 |
Q |
| |
|
|| |
|
|
| T |
6723933 |
ac |
6723932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 764 - 1092
Target Start/End: Original strand, 7747850 - 7748178
Alignment:
| Q |
764 |
aagacccttgtagtttattattcttaggttggaacaatttgtcaactcgagagatttaatagttgatggcagcagactctcctctggaaaggactccaag |
863 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||| | ||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
7747850 |
aagacccttgtagtttattcttcttaggttggaacaattttttaactcaagagatgtaatagttgatggcagcagactctcctccggaaaggactccaag |
7747949 |
T |
|
| Q |
864 |
atattcaaatcatcactaacacataattgttttagagaattgagttggaacaaaccccactcctctctagaagccgtcaagtttggacatctttctattc |
963 |
Q |
| |
|
|| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||| || ||||||||||||| || |
|
|
| T |
7747950 |
atttcaaaatcatcactaacacataattgttttagagatttgagttggaacaaaccccactcctctctcgaagccatcaatttaggacatctttctactc |
7748049 |
T |
|
| Q |
964 |
ggaggctgcctaggttggaaggcaactgcctcccaaaaaatgattccagccatggacactcatacaacgcgagagaatgaagattggtgaacaattgtag |
1063 |
Q |
| |
|
||||||||| ||| ||||| |||| ||||||||| |||| |||| |||||||||| ||||||||| |||| ||||||||||||||||||| || || |
|
|
| T |
7748050 |
ggaggctgcatagattggagggcagctgcctcccggaaaacaattctagccatggactatcatacaacatgagaaaatgaagattggtgaacaagtgcag |
7748149 |
T |
|
| Q |
1064 |
tgtaaaaggaaatgaggaagagtgccaac |
1092 |
Q |
| |
|
|| |||||| || ||||||||||||||| |
|
|
| T |
7748150 |
tgcaaaaggcaaataggaagagtgccaac |
7748178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 524 - 762
Target Start/End: Complemental strand, 6851479 - 6851241
Alignment:
| Q |
524 |
aatgtggtgcacctggatacaataacatctgatctcagcctcaaatcaagaaattgtcacggaagggatgtgacaaattctatgccaacgctctccttgc |
623 |
Q |
| |
|
|||||||||||||||| ||||||||||||| ||||||||| | ||||| ||||||||||| ||| ||||||| |||| |||||||| ||||| ||| | |
|
|
| T |
6851479 |
aatgtggtgcacctggctacaataacatctcatctcagccgccaatcaggaaattgtcacatcaggaatgtgactaattgtatgccaatgctctgcttcc |
6851380 |
T |
|
| Q |
624 |
tccatttggtacaatttcttaagtaatggacagtcatgaatggacaaagtagaaagggagctgggtagatcctcctccggcaagcgttcaagacaagggc |
723 |
Q |
| |
|
||| |||||||| | ||||| |||||||||||||||||||||| ||||||||||||| ||||| ||| ||||||||||||||| ||||||||||||| |
|
|
| T |
6851379 |
tccctttggtacttctgcttaattaatggacagtcatgaatggactaagtagaaagggatctgggaagaccctcctccggcaagctctcaagacaagggc |
6851280 |
T |
|
| Q |
724 |
aatcttcaatatatagagattcaagcgaagtgaggtgga |
762 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
6851279 |
aatcttcaatatatagagattcaagagaagtgagctgga |
6851241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 588 - 931
Target Start/End: Complemental strand, 4391270 - 4390927
Alignment:
| Q |
588 |
gggatgtgacaaattctatgccaacgctctccttgctccatttggtacaatttcttaagtaatggacagtcatgaatggacaaagtagaaagggagctgg |
687 |
Q |
| |
|
||||||||||||||| ||||||| | |||||||| |||| |||||||| | ||||||||||||||| | ||||||| |||| |||||||||| | | |
|
|
| T |
4391270 |
gggatgtgacaaattgtatgccagcactctccttcctccttttggtactgctccttaagtaatggacatttatgaatgaacaactgagaaagggagtttg |
4391171 |
T |
|
| Q |
688 |
gtagatcctcctccggcaagcgttcaagacaagggcaatcttcaatatatagagattcaagcgaagtgaggtggagaagacccttgtagtttattattct |
787 |
Q |
| |
|
||||| ||| ||||||||||||||| |||| ||||||| || |||| ||| |||| || || | |||||||||||||||||| ||||||||||||| |
|
|
| T |
4391170 |
gtagacccttctccggcaagcgttcgagactggggcaatgttgaatagataaagatgtgagagatttaaggtggagaagacccttgcagtttattattct |
4391071 |
T |
|
| Q |
788 |
taggttggaacaatttgtcaactcgagagatttaatagttgatggcagcagactctcctctggaaaggactccaagatattcaaa-tcatcactaacaca |
886 |
Q |
| |
|
|| || ||||| | | |||| ||||| | |||| | ||| ||||||||||||||||| ||||||||| | || |||||| ||||||| |||| |
|
|
| T |
4391070 |
taactttgaacattctctcaagctaagagagtcaatattatctggtagcagactctcctctgggaaggactcc-acattttcaaagtcatcaccaacaat |
4390972 |
T |
|
| Q |
887 |
taattgttttagagaattgagttggaacaaaccccactcctctct |
931 |
Q |
| |
|
|| | |||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
4390971 |
gaaatcttttagagaattgagttggaacaaaccccactcccctct |
4390927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 587 - 937
Target Start/End: Original strand, 5296416 - 5296766
Alignment:
| Q |
587 |
agggatgtgacaaattctatgccaacgctctccttgctccatttggtacaatttcttaagtaatggacagtcatgaatggacaaagtagaaagggagctg |
686 |
Q |
| |
|
|||||||||||||||| |||||||| | | ||||| |||| |||||||| || |||||||| ||||||| || |||||||||| ||||||||||| || |
|
|
| T |
5296416 |
agggatgtgacaaattttatgccaatgttttccttcctccttttggtaccgttgcttaagtatcggacagttattaatggacaaaatagaaagggagttg |
5296515 |
T |
|
| Q |
687 |
ggtagatcctcctccggcaagcgttcaagacaagggcaatcttcaatatatagagattcaagcgaagtgaggtggagaagacccttgtagtttattattc |
786 |
Q |
| |
|
|||||| |||||| ||||||| ||||||| | ||||| | ||||||| || |||| || || |||| || ||||| |||||||| || ||||||| |
|
|
| T |
5296516 |
ggtagacactcctcaggcaagcactcaagaccaaggcaaccatcaatatgtaaggattggagagatttgagatgaagaaggcccttgtaattcattattc |
5296615 |
T |
|
| Q |
787 |
ttaggttggaacaatttgtcaactcgagagatttaatagttgatggcagcagactctcctctggaaaggactccaagatattcaaa-tcatcactaacac |
885 |
Q |
| |
|
|||| || ||||||| | ||||||||||| | || ||| ||| |||| ||||||||| || || ||||||| | | |||||| ||||| |||||| |
|
|
| T |
5296616 |
ttagctttgaacaatatctcaactcgagatggtcaagagtcagtggaagcaaactctcctccgggaatgactccatg-ttttcaaagtcatcgctaacaa |
5296714 |
T |
|
| Q |
886 |
ataattgttttagagaattgagttggaacaaaccccactcctctctagaagc |
937 |
Q |
| |
|
|||| ||| |||||||||||||||||||| ||||||| |||||| ||||| |
|
|
| T |
5296715 |
tgaattctttcagagaattgagttggaacaacccccacttctctctcgaagc |
5296766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 667 - 937
Target Start/End: Original strand, 8587677 - 8587947
Alignment:
| Q |
667 |
acaaagtagaaagggagctgggtagatcctcctccggcaagcgttcaagacaagggcaatcttcaatatatagagattcaagcgaagtgaggtggagaag |
766 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||| ||||||| ||||||| |||||| | | ||| | |||| ||| ||| || ||||||||||||| |
|
|
| T |
8587677 |
acaaagtagaaagggagttgggtagaccctcctctggcaagctctcaagactagggcagttgtaaatttttagatatttaagagatttgaggtggagaag |
8587776 |
T |
|
| Q |
767 |
acccttgtagtttattattcttaggttggaacaatttgtcaactcgagagatttaatagttgatggcagcagactctcctctggaaaggactccaagata |
866 |
Q |
| |
|
||| ||| |||||||||||||||| || |||||||| |||| | ||| | || ||||| |||||| ||| |||||||||| |||||||||| | | |
|
|
| T |
8587777 |
acctttgcagtttattattcttagctttgaacaattaaacaaccaaatagactcaagagttggtggcagaagattctcctctgggaaggactccacg-tt |
8587875 |
T |
|
| Q |
867 |
ttcaaa-tcatcactaacacataattgttttagagaattgagttggaacaaaccccactcctctctagaagc |
937 |
Q |
| |
|
|||||| ||||||||||| || |||||||||||||||||||||||||||||| | |||||| ||||| |
|
|
| T |
8587876 |
ttcaaactcatcactaactttgaaagattttagagaattgagttggaacaaaccccattgctctctcgaagc |
8587947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 587 - 931
Target Start/End: Original strand, 5261611 - 5261953
Alignment:
| Q |
587 |
agggatgtgacaaattctatgccaacgctctccttgctccatttggtacaatttcttaagtaatggacagtcatgaatggacaaagtagaaagggagctg |
686 |
Q |
| |
|
|||||||||||||||| ||| ||||| |||||||| | || |||||||| | ||||| || |||||| ||| |||| |||| |||||||||||||| |
|
|
| T |
5261611 |
agggatgtgacaaattgtattccaactctctccttccaccttttggtacctctgcttaactattggacattcacgaatatacaatgtagaaagggagctc |
5261710 |
T |
|
| Q |
687 |
ggtagatcctcctccggcaagcgttcaagacaagggcaatcttcaatatatagagattcaagcgaagtgaggtggagaagacccttgtagtttattattc |
786 |
Q |
| |
|
|| ||| ||||||| ||||| || ||||||||||| ||| |||||| || |||| | || || |||| | ||||||||||||||||||||||||| |
|
|
| T |
5261711 |
ggaagaccctcctctggcaatcgctcaagacaaggataatattcaatgta-agag-tctgagagatttgagattaagaagacccttgtagtttattattc |
5261808 |
T |
|
| Q |
787 |
ttaggttggaacaatttgtcaactcgagagatttaatagttgatggcagcagactctcctctggaaaggactccaagatattcaaa-tcatcactaacac |
885 |
Q |
| |
|
|||| || ||||||||| ||| ||||| |||| ||||| |||||| ||| ||||||| || || |||||| | || ||||| || |||||||| |
|
|
| T |
5261809 |
ttagctttgaacaattttccaaacgaagagacttaagagttggtggcagtagattctcctccgggaaagactcc-acattctcaaagtcgtcactaactt |
5261907 |
T |
|
| Q |
886 |
ataattgttttagagaattgagttggaacaaaccccactcctctct |
931 |
Q |
| |
|
|||| ||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
5261908 |
tgaattctttcagagaattgagttcgaacaaaccccactcctctct |
5261953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 271 - 389
Target Start/End: Original strand, 6897454 - 6897574
Alignment:
| Q |
271 |
aacagcgacatccttctggttacgtgtaagagcagtggtcgtgccattcatctggtcacgaatgggaatggatggcacc--aacagcatggtttcaggtc |
368 |
Q |
| |
|
|||||| |||| ||||||||| |||| |||||||||||| |||||||||| ||||||||| || |||||||||||| | || |||||||||||||||| |
|
|
| T |
6897454 |
aacagctacatacttctggttgtgtgtgagagcagtggtcatgccattcatttggtcacgagtgagaatggatggcaacaaaagagcatggtttcaggtc |
6897553 |
T |
|
| Q |
369 |
acatgtaagctgtcagaaaca |
389 |
Q |
| |
|
|||||||||| ||| |||||| |
|
|
| T |
6897554 |
acatgtaagcggtctgaaaca |
6897574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 587 - 733
Target Start/End: Original strand, 5278336 - 5278482
Alignment:
| Q |
587 |
agggatgtgacaaattctatgccaacgctctccttgctccatttggtacaatttcttaagtaatggacagtcatgaatggacaaagtagaaagggagctg |
686 |
Q |
| |
|
|||||||||||||||| ||| ||||| |||||||| |||| |||||||| | ||||| || | |||| ||| ||||| ||||||||||||||||||| |
|
|
| T |
5278336 |
agggatgtgacaaattgtattccaactctctccttcctccttttggtacctctgcttaactattcgacattcacgaatgtacaaagtagaaagggagctc |
5278435 |
T |
|
| Q |
687 |
ggtagatcctcctccggcaagcgttcaagacaagggcaatcttcaat |
733 |
Q |
| |
|
|| ||| ||||||| ||||| || ||||||||||| |||| |||||| |
|
|
| T |
5278436 |
ggaagaccctcctctggcaatcgctcaagacaaggacaatattcaat |
5278482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 667 - 931
Target Start/End: Complemental strand, 6523764 - 6523497
Alignment:
| Q |
667 |
acaaagtagaaagggagctgggtagatcctcctcc---ggcaagcgttcaagacaagggcaatcttcaatatatagagattcaagcgaagtgaggtggag |
763 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||| | ||||||| ||||||| ||| || ||||||||||||||| ||| || || |||||||||| |
|
|
| T |
6523764 |
acaaagtagtaagggagttgggtagatcctccttctctggcaagctctcaagactaggacagtcttcaatatatagatatttgagagatttgaggtggag |
6523665 |
T |
|
| Q |
764 |
aagacccttgtagtttattattcttaggttggaacaatttgtcaactcgagagatttaatagttgatggcagcagactctcctctggaaaggactccaag |
863 |
Q |
| |
|
|| |||||||| ||| ||||||||||| || ||||||| || || |||| | | ||||| |||||||||| |||||||||| || ||||||| | |
|
|
| T |
6523664 |
aaaacccttgttgttcattattcttagctttgaacaatcatataaatcaagagtgtccagagttggtggcagcagattctcctctgggaacgactccacg |
6523565 |
T |
|
| Q |
864 |
atattcaaa-tcatcactaacacataattgttttagagaattgagttggaacaaaccccactcctctct |
931 |
Q |
| |
|
| |||||| |||||||||||| | || | | | | ||||||||||||||||| |||||||||||||| |
|
|
| T |
6523564 |
-ttttcaaactcatcactaacaaagaaatatctcaaggaattgagttggaacaacccccactcctctct |
6523497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 987 - 1092
Target Start/End: Complemental strand, 6851236 - 6851131
Alignment:
| Q |
987 |
aactgcctcccaaaaaatgattccagccatggacactcatacaacgcgagagaatgaagattggtgaacaattgtagtgtaaaaggaaatgaggaagagt |
1086 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| || ||||| | ||||||| ||||||| ||||||||||| ||| |||||| || |||||||| | |
|
|
| T |
6851236 |
aactgcctcccaaaaaacgattccagccatggacaatcgtacaaaacaagagaatcaagattgttgaacaattgtggtgcaaaaggcaaggaggaagaat |
6851137 |
T |
|
| Q |
1087 |
gccaac |
1092 |
Q |
| |
|
|||||| |
|
|
| T |
6851136 |
gccaac |
6851131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 585 - 1090
Target Start/End: Complemental strand, 8571309 - 8570804
Alignment:
| Q |
585 |
gaagggatgtgacaaattctatgccaacgctctccttgctccatttggtacaatttcttaagtaatggacagtcatgaatggacaaagtagaaagggagc |
684 |
Q |
| |
|
||||||||||||| |||| |||||||||| ||||||| || | |||| ||| | |||||| |||| ||| || ||||| |||||||||||||||| |
|
|
| T |
8571309 |
gaagggatgtgacgaattgtatgccaacgttctccttccttcttttgatacttctccttaagcaatgaacatctattaatggccaaagtagaaagggaga |
8571210 |
T |
|
| Q |
685 |
tgggtagatcctcctccggcaagcgttcaagacaagggcaatcttcaatatatagagattcaagcgaagtgaggtggagaagacccttgtagtttattat |
784 |
Q |
| |
|
| |||||| ||||||| ||||||| ||||||||||| ||| ||||| |||||||| || || ||||||||||||| ||||||||||| ||||| |
|
|
| T |
8571209 |
ttggtagaccctcctctggcaagctctcaagacaaggacaagacaaaatatttagagattggagagatttgaggtggagaagtcccttgtagttcattat |
8571110 |
T |
|
| Q |
785 |
tcttaggttggaacaatttgtcaactcgagagatttaatagttgatggcagcagactctcctctggaaaggactccaagatattcaaatcatcactaaca |
884 |
Q |
| |
|
|||||| || |||||||| ||| |||| | || ||||| |||||||| |||||||||||| ||||| |||| | || || |||||| ||| |
|
|
| T |
8571109 |
tcttagctttgaacaattatacaaacaaagagtgtgaagagttggtggcagcaaactctcctctgggaaggattccacatttttaaagtcatcaacaact |
8571010 |
T |
|
| Q |
885 |
cataattgttttagagaattgagttggaacaaaccccactcctctctagaagccgtcaagtttggacatctttctattcggaggctgcctaggttggaag |
984 |
Q |
| |
|
| ||| ||| ||||| || ||||||||||||||||| |||||||| ||| | | || ||||| || ||| |||| || ||| | |||||||| |
|
|
| T |
8571009 |
ctaaatgatttcagagagttaagttggaacaaaccccaatcctctcttgaaccaattaattttgggcaattttgtattacaagtttgctcaagttggaag |
8570910 |
T |
|
| Q |
985 |
gcaactgcctcccaaaaaatgattccagccatggacactcatacaacgcgagagaatgaagattggtgaacaattgtagtgtaaaaggaaatgaggaaga |
1084 |
Q |
| |
|
|||| | || ||||||||||||| |||||| || ||||| | ||| ||||||||||||||||||| ||| | |||||||| || ||||| || |
|
|
| T |
8570909 |
gcaaacctccccttggaaatgattccagctgtggacaatcggacaactctagataatgaagattggtgaacaagtgtggggtaaaaggcaaggaggagga |
8570810 |
T |
|
| Q |
1085 |
gtgcca |
1090 |
Q |
| |
|
|||||| |
|
|
| T |
8570809 |
gtgcca |
8570804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 661 - 927
Target Start/End: Original strand, 8469305 - 8469574
Alignment:
| Q |
661 |
gaatggacaaagtagaaagggagctgggtagatcctcctcc---ggcaagcgttcaagacaagggcaatcttcaatatatagagattcaagcgaagtgag |
757 |
Q |
| |
|
||||| ||||| ||||||||||| |||||||| |||||| | ||||||| ||||||| |||||| || ||||||||||| || || || |||| |
|
|
| T |
8469305 |
gaatgtacaaattagaaagggagttgggtagaccctccttctctggcaagcactcaagactagggcagtcgacaatatatagatctttgagggatttgag |
8469404 |
T |
|
| Q |
758 |
gtggagaagacccttgtagtttattattcttaggttggaacaatttgtcaactcgagagatttaatagttgatggcagcagactctcctctggaaaggac |
857 |
Q |
| |
|
|||||||| |||||||| ||| ||||||||||| || |||||||| |||| | ||| | ||| ||||| ||||||||||||||||||||| |||||| |
|
|
| T |
8469405 |
gtggagaaaacccttgttgttcattattcttagctttgaacaattattcaaattaagatacgtaagagttggtggcagcagactctcctctgggaaggac |
8469504 |
T |
|
| Q |
858 |
tccaagatattcaaa-tcatcactaacacataattgttttagagaattgagttggaacaaaccccactcct |
927 |
Q |
| |
|
|| | | | |||||| ||||| |||||| | ||| ||| | ||||||||| ||||||||||||||||| |
|
|
| T |
8469505 |
tctacg-ttttcaaactcatcgctaacaaagaatgatttcaaggaattgagtctgaacaaaccccactcct |
8469574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 125 - 370
Target Start/End: Original strand, 6256452 - 6256689
Alignment:
| Q |
125 |
tcacaagaataacgaagatgggattatatagtgaattatattaaaaagaattacaaacgcatcaagcctcagcagtaaactcatatccaaatggggtgcc |
224 |
Q |
| |
|
||||||||||||| |||| |||||||| ||||||||||||||||||||||||| ||| || |||| || || || |||||||||||| || ||| |
|
|
| T |
6256452 |
tcacaagaataacaaagagaagattatatggtgaattatattaaaaagaattacatgtgcaataaacctccgc-gtcaa--catatccaaatgcggggcc |
6256548 |
T |
|
| Q |
225 |
tacaattaaaccaagcatgtgttttgtggatgtggaacaaacagacaacagcgacatccttctggttacgtgtaagagcagtggtcgtgccattcatctg |
324 |
Q |
| |
|
||||||| |||| ||||| | |||||||| |||||||| ||||||||||||||||||||| | | ||||| |||||| ||||||| ||||| |
|
|
| T |
6256549 |
tacaattggaccatgcatgagctttgtggaagtggaaca-------aacagcgacatccttctggttgtgcatgagagcggtggtcatgccattgatctg |
6256641 |
T |
|
| Q |
325 |
gtcacgaatgggaatggatggcacc--aacagcatggtttcaggtcac |
370 |
Q |
| |
|
|||| ||||| |||||||| || | || |||||||||||||||||| |
|
|
| T |
6256642 |
gtcatgaatgataatggatgccaacaaaagagcatggtttcaggtcac |
6256689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 754 - 931
Target Start/End: Original strand, 7585712 - 7585889
Alignment:
| Q |
754 |
tgaggtggagaagacccttgtagtttattattcttaggttggaacaatttgtcaactcgagagatttaatagttgatggcagcagactctcctctggaaa |
853 |
Q |
| |
|
|||||||||||| |||||| | ||| ||||||||||| || |||||||| | ||| |||| | | |||||||| |||||||||| |||||||||| || |
|
|
| T |
7585712 |
tgaggtggagaaaaccctttttgttcattattcttagctttgaacaattagagaaccagagaaagtgaatagttggtggcagcagattctcctctgggaa |
7585811 |
T |
|
| Q |
854 |
ggactccaagatattcaaa-tcatcactaacacataattgttttagagaattgagttggaacaaaccccactcctctct |
931 |
Q |
| |
|
||||||| | | |||||| ||||||||||||| || | | |||||||||||||||||||||||||||| |||||| |
|
|
| T |
7585812 |
cgactccacg-ttttcaaactcatcactaacaccgaaagctctcagagaattgagttggaacaaaccccactgctctct |
7585889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 668 - 931
Target Start/End: Original strand, 6945020 - 6945286
Alignment:
| Q |
668 |
caaagtagaaagggagctgggtagatcctcctcc---ggcaagcgttcaagacaagggcaatcttcaatatatagagattcaagcgaagtgaggtggaga |
764 |
Q |
| |
|
||||||| |||||||| ||||||||||||||| | ||||||| ||||||| |||||| | |||||||||| ||| || || ||||||||||| |
|
|
| T |
6945020 |
caaagtataaagggagttgggtagatcctccttctctggcaagctctcaagactagggcagttgataatatatagatatttgagagatttgaggtggaga |
6945119 |
T |
|
| Q |
765 |
agacccttgtagtttattattcttaggttggaacaatttgtcaactcgagagatttaatagttgatggcagcagactctcctctggaaaggactccaaga |
864 |
Q |
| |
|
| |||||| | ||| ||||||||||| || |||||||| ||| | ||| | | | ||||| |||||||||| |||||||||| || ||||||| | |
|
|
| T |
6945120 |
aaaccctttttgttcattattcttagctttgaacaattatgcaaattaagatactccagagttggtggcagcagattctcctctgggaacgactccacgt |
6945219 |
T |
|
| Q |
865 |
tattcaaa-tcatcactaacacataattgttttagagaattgagttggaacaaaccccactcctctct |
931 |
Q |
| |
|
| |||||| |||||||||||| |||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
6945220 |
t-ttcaaactcatcactaacaacgaattcaatgagagaattgagttggaacaaaccccactcctctct |
6945286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 271 - 376
Target Start/End: Original strand, 6166264 - 6166371
Alignment:
| Q |
271 |
aacagcgacatccttctggttacgtgtaagagcagtggtcgtgccattcatctggtcacgaatgggaatggatggcaccaacag--catggtttcaggtc |
368 |
Q |
| |
|
|||||| |||| |||||||| |||| ||||| |||||| |||||||||| |||||||||||| |||||||||||| ||| || |||||||||||||| |
|
|
| T |
6166264 |
aacagctacatatttctggttgtgtgtgagagcggtggtcatgccattcatttggtcacgaatgagaatggatggcaacaaaagatcatggtttcaggtc |
6166363 |
T |
|
| Q |
369 |
acatgtaa |
376 |
Q |
| |
|
|||||||| |
|
|
| T |
6166364 |
acatgtaa |
6166371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 587 - 937
Target Start/End: Original strand, 5247848 - 5248198
Alignment:
| Q |
587 |
agggatgtgacaaattctatgccaacgctctccttgctccatttggtacaatttcttaagtaatggacagtcatgaatggacaaagtagaaagggagctg |
686 |
Q |
| |
|
||||||||||| |||| ||||||||| ||||||| |||| |||||||| | || ||||||| |||| | |||| ||| |||||||||||| || |
|
|
| T |
5247848 |
agggatgtgacgaattgtatgccaacactctcctccctccttttggtacttctgctcaagtaattgacaattccgaatctccaatgtagaaagggagttg |
5247947 |
T |
|
| Q |
687 |
ggtagatcctcctccggcaagcgttcaagacaagggcaatcttcaatatatagagattcaagcgaagtgaggtggagaagacccttgtagtttattattc |
786 |
Q |
| |
|
|| ||| ||||||| |||||||||||||||| ||||||| | |||| ||| ||||| || || |||||||||||||||||| |||||||||||| |
|
|
| T |
5247948 |
ggaagaccctcctctggcaagcgttcaagactggggcaatgtcgaatagataaagatttgagagattcaaggtggagaagacccttgaagtttattattc |
5248047 |
T |
|
| Q |
787 |
ttaggttggaacaatttgtcaactcgagagatttaatagttgatggcagcagactctcctctggaaaggactccaagatattcaaa-tcatcactaacac |
885 |
Q |
| |
|
||| || ||||| ||| ||| | | | | |||| ||||| |||||| ||| |||||||||| || |||||| | || |||||| ||||| ||||| |
|
|
| T |
5248048 |
ttaactttgaacattttcccaattgaaaatagttaagagttggtggcagtagattctcctctgggaaagactcc-acattttcaaagtcatcgctaacct |
5248146 |
T |
|
| Q |
886 |
ataattgttttagagaattgagttggaacaaaccccactcctctctagaagc |
937 |
Q |
| |
|
|| ||| |||||||| |||||||| |||||||||||| |||| ||||| |
|
|
| T |
5248147 |
tgaaacttttaagagaattaagttggaataaaccccactcccctctcgaagc |
5248198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 294 - 376
Target Start/End: Complemental strand, 6851691 - 6851607
Alignment:
| Q |
294 |
gtgtaagagcagtggtcgtgccattcatctggtcacgaatgggaatggatggcacc--aacagcatggtttcaggtcacatgtaa |
376 |
Q |
| |
|
|||| |||| |||||| ||||||||||||||||||| |||| |||||||||||| | || |||||||||||||||||||||||| |
|
|
| T |
6851691 |
gtgtgagaggagtggtggtgccattcatctggtcacaaatgagaatggatggcaacaaaatagcatggtttcaggtcacatgtaa |
6851607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 667 - 809
Target Start/End: Complemental strand, 6530805 - 6530660
Alignment:
| Q |
667 |
acaaagtagaaagggagctgggtagatcctcctcc---ggcaagcgttcaagacaagggcaatcttcaatatatagagattcaagcgaagtgaggtggag |
763 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||| | | ||||| |||||| |||||| ||||||||||||||| | ||||| || |||||||||| |
|
|
| T |
6530805 |
acaaagtagtaagggagttgggtagatcctccttctctgtcaagctctcaagagtagggcagtcttcaatatatagacaatcaagagatttgaggtggag |
6530706 |
T |
|
| Q |
764 |
aagacccttgtagtttattattcttaggttggaacaatttgtcaac |
809 |
Q |
| |
|
|| |||||| | ||| ||||||||||| || ||| ||||| ||||| |
|
|
| T |
6530705 |
aaaaccctttttgttcattattcttagctttgaaaaatttttcaac |
6530660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 588 - 937
Target Start/End: Original strand, 5265754 - 5266103
Alignment:
| Q |
588 |
gggatgtgacaaattctatgccaacgctctccttgctccatttggtacaatttcttaagtaatggacagtcatgaatggacaaagtagaaagggagctgg |
687 |
Q |
| |
|
||||| |||||||| |||||||||||||||||| |||| |||||||| | ||||| ||||||||||| | || | |||| | |||| ||| ||| |
|
|
| T |
5265754 |
gggatatgacaaatcgtatgccaacgctctccttcctccttttggtactgctccttaattaatggacagttaagactcaacaactgataaagtgagttgg |
5265853 |
T |
|
| Q |
688 |
gtagatcctcctccggcaagcgttcaagacaagggcaatcttcaatatatagagattcaagcgaagtgaggtggagaagacccttgtagtttattattct |
787 |
Q |
| |
|
||||| | ||||| ||||||||||||| || ||||| | | |||||||| | || || || | |||||||||||||||||||||||||||||||| |
|
|
| T |
5265854 |
gtagaccgtcctctggcaagcgttcaacactggggcagtgtagaatatataaatatctgagagatttaaggtggagaagacccttgtagtttattattct |
5265953 |
T |
|
| Q |
788 |
taggttggaacaatttgtcaactcgagagatttaatagttgatggcagcagactctcctctggaaaggactccaagatattcaa-atcatcactaacaca |
886 |
Q |
| |
|
|| || ||||| | ||| | | ||| |||| ||||| |||||| ||| ||||||| || ||||| | ||| || ||||| ||||||||||||| |
|
|
| T |
5265954 |
taactttgaacatcgttccaattgaaaagagttaagagttggtggcagtagattctcctccgggaaggagt-caacattttcaaggtcatcactaacact |
5266052 |
T |
|
| Q |
887 |
taattgttttagagaattgagttggaacaaaccccactcctctctagaagc |
937 |
Q |
| |
|
|| || |||||||| ||||||||||||||||||||| |||| ||||| |
|
|
| T |
5266053 |
gaaactttccagagaatttagttggaacaaaccccactcccctctcgaagc |
5266103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 270 - 377
Target Start/End: Complemental strand, 6724704 - 6724595
Alignment:
| Q |
270 |
caacagcgacatccttctggttacgtgtaagagcagtggtcgtgccattcatctggtcacgaatgggaatggatggcaccaaca--gcatggtttcaggt |
367 |
Q |
| |
|
|||||| | ||| ||||||||| | || |||| |||||| |||||||||||||||||||||||| || ||||||||| ||| | ||||||||||||| |
|
|
| T |
6724704 |
caacagaggcattcttctggttgtgcgtgagaggagtggttgtgccattcatctggtcacgaatgagattggatggcaacaaaatcacatggtttcaggt |
6724605 |
T |
|
| Q |
368 |
cacatgtaag |
377 |
Q |
| |
|
|||||||||| |
|
|
| T |
6724604 |
cacatgtaag |
6724595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 587 - 931
Target Start/End: Original strand, 6941607 - 6941954
Alignment:
| Q |
587 |
agggatgtgacaaattctatgccaacgctctccttgctccatttggtacaatttcttaagtaatggacagtcatgaatggacaaagtagaaagggagctg |
686 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| |||| ||| ||| | ||| | || | ||| || | ||| ||||||| |||||||| || |
|
|
| T |
6941607 |
agggatgtgacaaattgtatgccaacgctctcctccctccttttcatacttctcctttattattccacattcttcaatccgcaaagtataaagggagttg |
6941706 |
T |
|
| Q |
687 |
ggtagatcctc---ctccggcaagcgttcaagacaagggcaatcttcaatatatagagattcaagcgaagtgaggtggagaagacccttgtagtttatta |
783 |
Q |
| |
|
||||||||||| ||| ||||||| ||||||| ||| || | ||||||||| |||| || || |||||||||||| |||||| | ||| |||| |
|
|
| T |
6941707 |
ggtagatcctccttctctggcaagctctcaagactaggacagttccaaatatatagggatttgagagatttgaggtggagaaaaccctttttgttcatta |
6941806 |
T |
|
| Q |
784 |
ttcttaggttggaacaatttgtcaactcgagagatttaatagttgatggcagcagactctcctctggaaaggactccaagatattcaaa-tcatcactaa |
882 |
Q |
| |
|
||||||| || ||||||||| |||| | ||| ||| | ||| |||||||||| |||||||||| ||||||||| | || |||||| |||||||||| |
|
|
| T |
6941807 |
ttcttagctttgaacaatttctcaaattaagatcagtaagacttggtggcagcagattctcctctgggaaggactcc-acattttcaaactcatcactaa |
6941905 |
T |
|
| Q |
883 |
cacataattgttttagagaattgagttggaacaaaccccactcctctct |
931 |
Q |
| |
|
|| | |||| | | ||| |||||||||||||||||||||||||||| |
|
|
| T |
6941906 |
cagagaattctaacaaggaactgagttggaacaaaccccactcctctct |
6941954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 831 - 937
Target Start/End: Complemental strand, 6482097 - 6481991
Alignment:
| Q |
831 |
ggcagcagactctcctctggaaaggactccaagatattcaaa-tcatcactaacacataattgttttagagaattgagttggaacaaaccccactcctct |
929 |
Q |
| |
|
||||| ||| |||||||||||||||| |||| | | |||||| ||||||||||| | || | ||| ||||||||||||||||||||||||||||| ||| |
|
|
| T |
6482097 |
ggcagtagattctcctctggaaaggattccacgtt-ttcaaactcatcactaactctaaactctttcagagaattgagttggaacaaaccccactcttct |
6481999 |
T |
|
| Q |
930 |
ctagaagc |
937 |
Q |
| |
|
|| ||||| |
|
|
| T |
6481998 |
cttgaagc |
6481991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 754 - 931
Target Start/End: Complemental strand, 6782520 - 6782343
Alignment:
| Q |
754 |
tgaggtggagaagacccttgtagtttattattcttaggttggaacaatttgtcaactcgagagatttaatagttgatggcagcagactctcctctggaaa |
853 |
Q |
| |
|
|||||||||||| |||||||| ||| ||||||||||| || ||||||||| || | |||| | || |||||||| || ||| |||||||||| || |
|
|
| T |
6782520 |
tgaggtggagaaaacccttgttgttcattattcttagctttgaacaattttccacataaagagtctcaagggttgatggtagtagattctcctctgggaa |
6782421 |
T |
|
| Q |
854 |
ggactccaagatattcaaa-tcatcactaacacataattgttttagagaattgagttggaacaaaccccactcctctct |
931 |
Q |
| |
|
|||||||| | | |||||| |||||| ||||| | || ||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
6782420 |
ggactccacgtt-ttcaaactcatcagtaacaaagaaagatttcaaggaattgagttggaacaaaccccactcctctct |
6782343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 754 - 931
Target Start/End: Complemental strand, 6841759 - 6841582
Alignment:
| Q |
754 |
tgaggtggagaagacccttgtagtttattattcttaggttggaacaatttgtcaactcgagagatttaatagttgatggcagcagactctcctctggaaa |
853 |
Q |
| |
|
|||||||||||| |||||| | ||| ||| ||||||| || |||||||| |||| | ||| || | ||||| |||||||||| |||||||||| || |
|
|
| T |
6841759 |
tgaggtggagaaaaccctttttgttcatttttcttagctttgaacaattaatcaaataaagatccttcagagttggtggcagcagattctcctctgggaa |
6841660 |
T |
|
| Q |
854 |
ggactccaagatattcaaa-tcatcactaacacataattgttttagagaattgagttggaacaaaccccactcctctct |
931 |
Q |
| |
|
||||||| | | |||||| ||||||||||||| || ||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
6841659 |
cgactccacgtt-ttcaaactcatcactaacactgaaccatttcaaggaattgagttggaacaaaccccactcctctct |
6841582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 306 - 388
Target Start/End: Original strand, 6235448 - 6235532
Alignment:
| Q |
306 |
tggtcgtgccattcatctggtcacgaatgggaatggatggcaccaacagc--atggtttcaggtcacatgtaagctgtcagaaac |
388 |
Q |
| |
|
||||| |||||||||| |||||| ||||| |||||||||||| ||| || | ||||||||||||||||||||| ||||||||| |
|
|
| T |
6235448 |
tggtcatgccattcatttggtcatgaatgagaatggatggcaacaaaagagaacggtttcaggtcacatgtaagcggtcagaaac |
6235532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 754 - 802
Target Start/End: Complemental strand, 6450986 - 6450938
Alignment:
| Q |
754 |
tgaggtggagaagacccttgtagtttattattcttaggttggaacaatt |
802 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||||||||| |||||||| |
|
|
| T |
6450986 |
tgaggtggagaaaacccttgtagttcattattcttaggtttgaacaatt |
6450938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 754 - 802
Target Start/End: Complemental strand, 6730914 - 6730866
Alignment:
| Q |
754 |
tgaggtggagaagacccttgtagtttattattcttaggttggaacaatt |
802 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||||||||| |||||||| |
|
|
| T |
6730914 |
tgaggtggagaaaacccttgtagttcattattcttaggtttgaacaatt |
6730866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 899 - 937
Target Start/End: Complemental strand, 6450838 - 6450800
Alignment:
| Q |
899 |
agaattgagttggaacaaaccccactcctctctagaagc |
937 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
6450838 |
agaattgagttggaacaaaccccactcctctctcgaagc |
6450800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 899 - 937
Target Start/End: Complemental strand, 6730766 - 6730728
Alignment:
| Q |
899 |
agaattgagttggaacaaaccccactcctctctagaagc |
937 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
6730766 |
agaattgagttggaacaaaccccactcctctctcgaagc |
6730728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 900 - 931
Target Start/End: Complemental strand, 6556760 - 6556729
Alignment:
| Q |
900 |
gaattgagttggaacaaaccccactcctctct |
931 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
6556760 |
gaattgagttggaacaaaccccactcctctct |
6556729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 900 - 931
Target Start/End: Original strand, 6733661 - 6733692
Alignment:
| Q |
900 |
gaattgagttggaacaaaccccactcctctct |
931 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
6733661 |
gaattgagttggaacaaaccccactcctctct |
6733692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 389
Target Start/End: Complemental strand, 6593979 - 6593894
Alignment:
| Q |
306 |
tggtcgtgccattcatctggtcacgaatgggaatggatggcaccaaca--gcatggtttcaggtcacatgtaagctgtcagaaaca |
389 |
Q |
| |
|
|||| |||||||||||||||||| ||||| || || |||||| || | |||||||||||||||||||||||| ||||| |||| |
|
|
| T |
6593979 |
tggttgtgccattcatctggtcatgaatgagattgaatggcaaaaaaatcgcatggtttcaggtcacatgtaagtggtcaggaaca |
6593894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 8573069 - 8573015
Alignment:
| Q |
30 |
tgaaaattacagaaattcattaaaagaaagaggtactggaccagatgagccttca |
84 |
Q |
| |
|
|||||||||||| ||||||| |||||||||||||| |||| || |||||| |||| |
|
|
| T |
8573069 |
tgaaaattacaggaattcatgaaaagaaagaggtattggagcaaatgagctttca |
8573015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 587 - 620
Target Start/End: Complemental strand, 6782690 - 6782657
Alignment:
| Q |
587 |
agggatgtgacaaattctatgccaacgctctcct |
620 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| |
|
|
| T |
6782690 |
agggatgtgacaaattgtatgccaacgctctcct |
6782657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 824 - 861
Target Start/End: Original strand, 8452555 - 8452592
Alignment:
| Q |
824 |
agttgatggcagcagactctcctctggaaaggactcca |
861 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
8452555 |
agttggtggcagcagactctcctttggaaaggactcca |
8452592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425 (Bit Score: 161; Significance: 3e-85; HSPs: 4)
Name: scaffold0425
Description:
Target: scaffold0425; HSP #1
Raw Score: 161; E-Value: 3e-85
Query Start/End: Original strand, 524 - 816
Target Start/End: Complemental strand, 13912 - 13621
Alignment:
| Q |
524 |
aatgtggtgcacctggatacaataacatctgatctcagcctcaaatcaagaaattgtcacggaagggatgtgacaaattctatgccaacgctctccttgc |
623 |
Q |
| |
|
|||||||||||||||| ||||||||||||| ||||||||| | ||||| ||||||||||| ||| | ||||| |||| |||||||| ||||||||| | |
|
|
| T |
13912 |
aatgtggtgcacctggctacaataacatctcatctcagccgccaatcaggaaattgtcacatcaggaa-gtgactaattgtatgccaatgctctccttcc |
13814 |
T |
|
| Q |
624 |
tccatttggtacaatttcttaagtaatggacagtcatgaatggacaaagtagaaagggagctgggtagatcctcctccggcaagcgttcaagacaagggc |
723 |
Q |
| |
|
||| |||||||| | ||||| |||||||||||||||||||||| ||||||||||||| ||||| ||| ||||||||||||||| ||||||||||||| |
|
|
| T |
13813 |
tccctttggtacttctgcttaattaatggacagtcatgaatggactaagtagaaagggatctgggaagaccctcctccggcaagctctcaagacaagggc |
13714 |
T |
|
| Q |
724 |
aatcttcaatatatagagattcaagcgaagtgaggtggagaagacccttgtagtttattattcttaggttggaacaatttgtcaactcgagag |
816 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||| |||||||||||| ||||||| |||| |
|
|
| T |
13713 |
aatcttcaatatatagagattcaagcaaagtgaggtagagaagacccttgtagtttattattcctagattggaacaatttttcaactcaagag |
13621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425; HSP #2
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 871 - 958
Target Start/End: Complemental strand, 13608 - 13521
Alignment:
| Q |
871 |
aatcatcactaacacataattgttttagagaattgagttggaacaaaccccactcctctctagaagccgtcaagtttggacatctttc |
958 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||| |||| || ||||||||||| |
|
|
| T |
13608 |
aatcatcactaacactgaattgtttcagagaattgagttggaacaaaccccactcctctcttgaagccatcaatttaggacatctttc |
13521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 271 - 377
Target Start/End: Complemental strand, 14146 - 14038
Alignment:
| Q |
271 |
aacagcgacatccttctggttacgtgtaagagcagtggtcgtgccattcatctggtcacgaatgggaatggatggcacc--aacagcatggtttcaggtc |
368 |
Q |
| |
|
||||||| ||| |||||||| |||| |||| |||||| ||||||||||| ||||||| |||| |||||||||||| | || |||||||||||||||| |
|
|
| T |
14146 |
aacagcggcattcttctggtcgtgtgtgagaggagtggttgtgccattcatttggtcacaaatgagaatggatggcaacaaaatagcatggtttcaggtc |
14047 |
T |
|
| Q |
369 |
acatgtaag |
377 |
Q |
| |
|
||||||||| |
|
|
| T |
14046 |
acatgtaag |
14038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425; HSP #4
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 900 - 931
Target Start/End: Complemental strand, 9808 - 9777
Alignment:
| Q |
900 |
gaattgagttggaacaaaccccactcctctct |
931 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
9808 |
gaattgagttggaacaaaccccactcctctct |
9777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 673 - 937
Target Start/End: Complemental strand, 6575595 - 6575331
Alignment:
| Q |
673 |
tagaaagggagctgggtagatcctcctccggcaagcgttcaagacaagggcaatcttc-aatatatagagattcaagcgaagtgaggtggagaagaccct |
771 |
Q |
| |
|
||||||||||| | |||| | | ||||| |||||||| ||||||| |||||| ||||| |||||||||| || ||| || |||||||||||||||||| |
|
|
| T |
6575595 |
tagaaagggagttcggtataccttcctctggcaagcgctcaagactagggca-tcttccaatatatagaactttaagagatttgaggtggagaagaccct |
6575497 |
T |
|
| Q |
772 |
tgtagtttattattcttaggttggaacaatttgtcaactcgagagatttaatagttgatggcagcagactctcctctggaaaggactccaagatattcaa |
871 |
Q |
| |
|
||||||| ||||||||||| || ||||| || ||| || | | || ||||| ||||||||||||||||||||| || ||||||| | | || || |
|
|
| T |
6575496 |
tgtagttcattattcttagctttgaacatttatccaaaaaaagggtgtgaagagttggtggcagcagactctcctctgggaacgactccatggttttaaa |
6575397 |
T |
|
| Q |
872 |
atcatcactaacacataattgttttagagaattgagttggaacaaaccccactcctctctagaagc |
937 |
Q |
| |
|
||||||| |||| || | ||| | ||||| |||||||||||| |||| |||||||| ||||| |
|
|
| T |
6575396 |
gtcatcacaaacaatgaaatatttcaaggaatttagttggaacaaatcccagtcctctctcgaagc |
6575331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1643 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold1643
Description:
Target: scaffold1643; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 754 - 931
Target Start/End: Original strand, 11 - 188
Alignment:
| Q |
754 |
tgaggtggagaagacccttgtagtttattattcttaggttggaacaatttgtcaactcgagagatttaatagttgatggcagcagactctcctctggaaa |
853 |
Q |
| |
|
|||||||||||| |||||| | ||| ||||||||||| || |||||||| || ||||||| || ||||| |||||||||| |||||||||| || |
|
|
| T |
11 |
tgaggtggagaaaaccctttttgttcattattcttagctttgaacaattatacagacaaagagattgaagagttggtggcagcagattctcctctgggaa |
110 |
T |
|
| Q |
854 |
ggactccaagatattcaaa-tcatcactaacacataattgttttagagaattgagttggaacaaaccccactcctctct |
931 |
Q |
| |
|
||||||| | | |||||| ||||||||||| ||||| | |||||||||||||||||||||| |||||||||||| |
|
|
| T |
111 |
cgactccacgtt-ttcaaactcatcactaacttcaaattgatacagagaattgagttggaacaaactccactcctctct |
188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold2053 (Bit Score: 32; Significance: 0.00000003; HSPs: 2)
Name: scaffold2053
Description:
Target: scaffold2053; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1035 - 1090
Target Start/End: Complemental strand, 166 - 111
Alignment:
| Q |
1035 |
agagaatgaagattggtgaacaattgtagtgtaaaaggaaatgaggaagagtgcca |
1090 |
Q |
| |
|
||||||||||| ||||||||||| ||||||| |||||| || ||||| |||||||| |
|
|
| T |
166 |
agagaatgaagtttggtgaacaagtgtagtgaaaaaggcaacgaggatgagtgcca |
111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold2053; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 900 - 937
Target Start/End: Complemental strand, 301 - 264
Alignment:
| Q |
900 |
gaattgagttggaacaaaccccactcctctctagaagc |
937 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| ||||| |
|
|
| T |
301 |
gaattgagttggaacaaaccccactcctttcttgaagc |
264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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