View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8045_low_4 (Length: 685)

Name: NF8045_low_4
Description: NF8045
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8045_low_4
NF8045_low_4
[»] chr5 (21 HSPs)
chr5 (1-586)||(24885224-24885796)
chr5 (51-496)||(21391323-21391768)
chr5 (51-440)||(28760069-28760460)
chr5 (51-547)||(24163277-24163784)
chr5 (95-440)||(19569750-19570091)
chr5 (583-671)||(24885109-24885197)
chr5 (244-496)||(21216515-21216767)
chr5 (51-265)||(16525137-16525348)
chr5 (66-190)||(18303987-18304111)
chr5 (331-399)||(25936402-25936468)
chr5 (323-399)||(24838550-24838625)
chr5 (317-434)||(9824093-9824210)
chr5 (322-408)||(30608435-30608520)
chr5 (322-431)||(22825981-22826089)
chr5 (347-402)||(18304280-18304335)
chr5 (347-413)||(24492604-24492670)
chr5 (323-435)||(31730392-31730501)
chr5 (323-402)||(6999104-6999183)
chr5 (97-149)||(9823887-9823939)
chr5 (211-303)||(23110064-23110152)
chr5 (317-400)||(26013559-26013641)
[»] chr1 (15 HSPs)
chr1 (51-586)||(9756534-9757071)
chr1 (317-434)||(24006393-24006510)
chr1 (250-415)||(22638085-22638251)
chr1 (347-426)||(17496803-17496882)
chr1 (511-584)||(19223740-19223813)
chr1 (66-154)||(24285771-24285860)
chr1 (347-413)||(15440575-15440639)
chr1 (347-426)||(17316541-17316620)
chr1 (69-143)||(22637910-22637985)
chr1 (350-431)||(12397682-12397763)
chr1 (583-665)||(9756424-9756507)
chr1 (363-434)||(12669247-12669318)
chr1 (347-401)||(31584499-31584553)
chr1 (333-409)||(33438780-33438855)
chr1 (358-434)||(37283476-37283552)
[»] scaffold0300 (2 HSPs)
scaffold0300 (51-470)||(11683-12103)
scaffold0300 (583-642)||(7509-7568)
[»] chr2 (14 HSPs)
chr2 (51-586)||(16197461-16197997)
chr2 (95-401)||(8685285-8685587)
chr2 (51-228)||(17435824-17436002)
chr2 (97-472)||(26653471-26653840)
chr2 (87-400)||(26654874-26655180)
chr2 (95-196)||(21824097-21824199)
chr2 (100-196)||(21823242-21823339)
chr2 (66-136)||(22132688-22132759)
chr2 (583-671)||(25348221-25348309)
chr2 (347-402)||(21548476-21548531)
chr2 (286-496)||(16152299-16152509)
chr2 (330-471)||(26653263-26653403)
chr2 (354-434)||(17417585-17417665)
chr2 (583-672)||(24216131-24216220)
[»] chr8 (23 HSPs)
chr8 (116-582)||(5825945-5826413)
chr8 (116-582)||(5828544-5829012)
chr8 (51-317)||(5825478-5825746)
chr8 (323-496)||(24987533-24987706)
chr8 (95-328)||(18565652-18565881)
chr8 (166-471)||(23433042-23433336)
chr8 (51-228)||(21838539-21838716)
chr8 (244-471)||(13645034-13645263)
chr8 (244-471)||(13745459-13745688)
chr8 (110-226)||(16227183-16227299)
chr8 (94-196)||(20267592-20267693)
chr8 (94-196)||(21054221-21054322)
chr8 (583-671)||(5829049-5829137)
chr8 (323-399)||(18565024-18565099)
chr8 (583-672)||(23432806-23432896)
chr8 (583-671)||(5826444-5826532)
chr8 (66-136)||(13644862-13644933)
chr8 (66-136)||(13745287-13745358)
chr8 (325-471)||(16227354-16227503)
chr8 (323-386)||(20266058-20266121)
chr8 (323-386)||(21052687-21052750)
chr8 (358-434)||(24308892-24308969)
chr8 (585-672)||(18565950-18566038)
[»] chr7 (24 HSPs)
chr7 (51-586)||(2641677-2642214)
chr7 (186-470)||(19414375-19414658)
chr7 (95-372)||(4876079-4876356)
chr7 (66-496)||(17915181-17915606)
chr7 (221-584)||(10983723-10984090)
chr7 (51-586)||(19842457-19842997)
chr7 (243-440)||(2277945-2278142)
chr7 (95-279)||(9704494-9704674)
chr7 (332-584)||(48358098-48358354)
chr7 (51-159)||(19414268-19414377)
chr7 (51-226)||(20052964-20053140)
chr7 (66-471)||(17918328-17918722)
chr7 (95-586)||(19142763-19143252)
chr7 (95-586)||(20742162-20742651)
chr7 (585-669)||(17915726-17915810)
chr7 (326-408)||(17891532-17891613)
chr7 (323-408)||(1777248-1777332)
chr7 (583-671)||(20053370-20053458)
chr7 (585-638)||(2278310-2278363)
chr7 (322-402)||(19142099-19142178)
chr7 (322-402)||(20741498-20741577)
chr7 (347-402)||(27707504-27707559)
chr7 (530-586)||(20053287-20053343)
chr7 (331-423)||(32957446-32957537)
[»] scaffold0032 (2 HSPs)
scaffold0032 (13-471)||(78892-79333)
scaffold0032 (588-628)||(79471-79511)
[»] chr6 (14 HSPs)
chr6 (51-354)||(20396532-20396836)
chr6 (94-586)||(19731112-19731608)
chr6 (97-471)||(17208645-17209015)
chr6 (98-449)||(21688933-21689278)
chr6 (109-279)||(34659631-34659797)
chr6 (95-225)||(28952373-28952503)
chr6 (52-136)||(27165851-27165936)
chr6 (347-471)||(239973-240095)
chr6 (331-408)||(10814962-10815038)
chr6 (530-579)||(14201361-14201410)
chr6 (325-409)||(4312221-4312304)
chr6 (66-132)||(240304-240371)
chr6 (322-397)||(18615418-18615492)
chr6 (347-408)||(4097943-4098004)
[»] scaffold0527 (2 HSPs)
scaffold0527 (104-471)||(573-935)
scaffold0527 (104-471)||(8636-8998)
[»] chr3 (16 HSPs)
chr3 (213-582)||(21318192-21318560)
chr3 (97-496)||(13177952-13178347)
chr3 (51-402)||(11829695-11830039)
chr3 (95-434)||(8711333-8711668)
chr3 (95-434)||(9063220-9063555)
chr3 (217-587)||(13340758-13341127)
chr3 (99-496)||(9323233-9323627)
chr3 (115-238)||(3646700-3646822)
chr3 (347-471)||(21528194-21528318)
chr3 (11-129)||(15538696-15538809)
chr3 (323-399)||(17034635-17034710)
chr3 (354-413)||(16199203-16199262)
chr3 (344-399)||(19905611-19905666)
chr3 (583-622)||(21318591-21318630)
chr3 (322-408)||(13291866-13291952)
chr3 (316-397)||(15331496-15331576)
[»] scaffold0002 (1 HSPs)
scaffold0002 (97-496)||(128641-129036)
[»] scaffold0041 (1 HSPs)
scaffold0041 (66-522)||(26054-26506)
[»] chr4 (13 HSPs)
chr4 (243-438)||(22316846-22317041)
chr4 (95-279)||(13570761-13570941)
chr4 (51-194)||(39980944-39981087)
chr4 (245-434)||(8911412-8911598)
chr4 (95-196)||(24955329-24955430)
chr4 (383-586)||(5842810-5843015)
chr4 (350-435)||(18445803-18445888)
chr4 (330-399)||(4746429-4746497)
chr4 (583-671)||(5842694-5842783)
chr4 (347-408)||(11449568-11449629)
chr4 (358-434)||(19555465-19555541)
chr4 (583-666)||(22316595-22316679)
chr4 (322-402)||(19053054-19053133)
[»] scaffold0068 (1 HSPs)
scaffold0068 (293-471)||(57039-57223)
[»] scaffold0298 (2 HSPs)
scaffold0298 (116-255)||(13845-13984)
scaffold0298 (116-255)||(17615-17754)
[»] scaffold0711 (2 HSPs)
scaffold0711 (294-434)||(1771-1911)
scaffold0711 (95-133)||(2067-2105)
[»] scaffold0062 (2 HSPs)
scaffold0062 (262-438)||(2386-2562)
scaffold0062 (51-162)||(1276-1388)
[»] scaffold0121 (1 HSPs)
scaffold0121 (11-121)||(10638-10743)


Alignment Details
Target: chr5 (Bit Score: 440; Significance: 0; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 440; E-Value: 0
Query Start/End: Original strand, 1 - 586
Target Start/End: Complemental strand, 24885796 - 24885224
Alignment:
Q  1 caagcaaatttgcaagatacttcacttgcttaagaacaattgcttaattataagactttaccctactcaatcacaactgactgagatttc-tatatgctc 99  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||| || ||||||    
T  24885796 caagcaaatttgcaagatacttcccttgcttaagaacaattgcttaa------gactttaccctactcaatcacaactgactgagatttcctagatgctc 24885703  T
Q  100 aaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttacactctt 199  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  24885702 aaggtttcaccaagggacttatatgctcaagcacgcaggcgagaaactttgtaaaatgtttgccccaactgcaaaaaagttaatcggttcttacactctt 24885603  T
Q  200 tttaactagtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaataaatcccaactatttttctctatttg 299  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24885602 tttaactagtgagtgtaaactgaacaaataaacagactcacttcttaggatttctaagatataaacttgaaaataaatcccaactgtttttctctatttg 24885503  T
Q  300 atttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggaga 399  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| |||||||    
T  24885502 atttgatagaattttggtacagaaaaatatcagagtcttgttacttattct--------tcagctccttttataggcaatgatttgatagactttggaga 24885411  T
Q  400 agattgtcagtgcaaatagagtcgttgtgaagctttgatcaccaacattgtcccttttcctgatatggataaatccactagaaagtactttgaatttttt 499  Q
    |||||  ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24885410 agatttccagagcaaatagagtcgttgtgaagctttgatcaccaacgttgtcccttttcctgatatggataaatccactagaaagtactttgaatttttt 24885311  T
Q  500 atgttg-aaggagaattatctgtttcttttctcgttcctaatgtcctttgtatggttgtacacgtaaacagaagaagacaaaagaact 586  Q
     || || ||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||| |||||||||||||||||    
T  24885310 -tgctgaaaggagaattatctgtttcttttctcgttcctaatgtcctttgtccggttgtacacataaacaaaagaagacaaaagaact 24885224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 51 - 496
Target Start/End: Complemental strand, 21391768 - 21391323
Alignment:
Q  51 taagactttaccctactcaatcacaactgactgagatttc-tatatgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaacttt 149  Q
    ||||||||||||||  | |||||||||||||||||| ||| ||  |||||||||||||| |||| ||||| ||||||||||||| || || ||| |||||    
T  21391768 taagactttaccctttttaatcacaactgactgagacttcctaggtgctcaaggtttcatcaagagacttgtatgctcaagcacacaagctagagacttt 21391669  T
Q  150 gtaaaatgtttgccccaactgcaaataagttaattggttcttacactctttttaactagtgagtgtaaactgaacaaataaacggactcacttcttagga 249  Q
     |||||||||| |||||||| |||| ||||||||| ||||||||| ||||| |||||| |||||||||||||||||||| |||  ||||||| |||||||    
T  21391668 ctaaaatgtttaccccaactacaaacaagttaatttgttcttacattctttctaactactgagtgtaaactgaacaaatgaacaaactcactccttagga 21391569  T
Q  250 tttctaagatataaacttgaaaataaatcccaactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattc 349  Q
    |||||||||||||||||||||||  ||||  || | |||| | ||||||||||| | ||| || ||||||||||||||| |||||||||||| ||| |||    
T  21391568 tttctaagatataaacttgaaaaataatcataa-ttttttgcgctatttgatttaacagagttgtggcacagaaaaatagcagagtcttgttgcttcttc 21391470  T
Q  350 ttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatcaccaacattg 449  Q
    |||||||| |||||||| |||||||||||||| |||| ||||||||||||||| || ||  | |||||||||||||  ||| |||||||||| ||  |||    
T  21391469 ttcaggtcgtcagctccatttataggcaatgacttgagagacgttggagaagagtgccaacgtaaatagagtcgttaagaatctttgatcacgaatgttg 21391370  T
Q  450 tcccttttcctgatatggataaatccactagaaagtactttgaattt 496  Q
     | |||| ||||||| ||||||  ||| | |||||||||||||||||    
T  21391369 gctctttgcctgatacggataatcccattggaaagtactttgaattt 21391323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 51 - 440
Target Start/End: Original strand, 28760069 - 28760460
Alignment:
Q  51 taagactttaccctactcaatcacaactgactgagatttc-tatatgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaacttt 149  Q
    |||||||||||||| ||||||||||| ||||||||| ||| ||  |  |||||||||||| | | |||||||||| |||||||| ||  | |||||||||    
T  28760069 taagactttaccctgctcaatcacaaatgactgagacttcctaggttatcaaggtttcactaggagacttatatgttcaagcacacacacaagaaacttt 28760168  T
Q  150 gtaaaatgtttgccccaactgcaaataagttaattggttcttacactctttttaactagtgagtgtaaactgaacaaataaacggactcacttcttagga 249  Q
     ||||||||||| |||||||||||| ||||||||| ||||||| ||||||| |||||||||||| | |||||||||||| ||| |||||||| |||| ||    
T  28760169 ctaaaatgtttgtcccaactgcaaacaagttaatttgttcttaaactctttctaactagtgagtatgaactgaacaaatgaacagactcactccttaaga 28760268  T
Q  250 tttctaagatataaacttgaaaataaatcc-caactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttatt 348  Q
    |||||||||||||||||||||||  |||||  || | |||| | ||||||||||||| | | |||| ||||||||||||||||||||||||||  || ||    
T  28760269 tttctaagatataaacttgaaaaataatccttaagtgttttgcgctatttgatttgacaaagttttcgcacagaaaaatatcagagtcttgttgtttctt 28760368  T
Q  349 cttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatca 440  Q
    ||||| |||||||| | ||||||||||||||||||||| ||||||||||||||| |||||  |||||||||||| ||| |||||||||||||    
T  28760369 cttcaagtcttcagttgcttttataggcaatgatttgagagacgttggagaagagtgtcatcgcaaatagagtcattgagaagctttgatca 28760460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 51 - 547
Target Start/End: Original strand, 24163277 - 24163784
Alignment:
Q  51 taagactttaccctactcaatcacaactgactgagatttc-tatatgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaacttt 149  Q
    |||| ||||||| | |||||||| |||||| ||||  ||| ||| ||||  ||||||| ||||| ||||||| ||||||||||| || |||||| |||||    
T  24163277 taagtctttaccttgctcaatcataactgattgagccttcctatttgctttaggtttcgccaagagacttatctgctcaagcacacaggcgagagacttt 24163376  T
Q  150 gta-aaatgtttgccccaactgcaaataagttaattggttcttacactctttttaactagtgagtgtaaactgaacaaataaacggactcacttcttagg 248  Q
     || |||||||| |||||||| |||| ||| ||| |  |||||||||||||||||||||||||| ||||||||||||||| |||  ||||||| ||||||    
T  24163377 ctagaaatgttttccccaactacaaacaagataagtttttcttacactctttttaactagtgagggtaaactgaacaaatgaactaactcactccttagg 24163476  T
Q  249 atttctaagatataaacttgaaaataaatcccaactattttt-ctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttac---- 343  Q
    |||||||| ||||||||||||||   ||||| || | ||||| | ||||||| ||||| ||| |||| ||||||||||||| || ||||||||| |        
T  24163477 atttctaatatataaacttgaaat--aatcctaagtgtttttgcactatttgttttgacagagttttcgcacagaaaaataacatagtcttgttgcttct 24163574  T
Q  344 -----ttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctttgat 438  Q
         || |||||||  ||||||||||||| |||||||  |||||||| ||||||||||||| | |||||   ||||||||||||||| |||| ||  ||    
T  24163575 tatttttcttcttcaaatcttcagctccttatataggcgttgatttgagagacgttggagaaaagtgtcatcacaaatagagtcgttgagaagattcaat 24163674  T
Q  439 caccaacattgtcccttttcctgatatggataaatccactagaaagtactttgaattttttatgttg-aaggagaattatctgtttcttttctcgttcct 537  Q
    ||| ||||||| || ||| |||||| |||||||  ||  | ||||||||||||||| |  | || || |||| ||||||| |||| |||| |||||| ||    
T  24163675 cacgaacattgaccatttgcctgatttggataatcccgttggaaagtactttgaatctcctttgctgaaaggggaattatttgttgctttcctcgtttct 24163774  T
Q  538 aatgtccttt 547  Q
    ||||||||||    
T  24163775 aatgtccttt 24163784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 95 - 440
Target Start/End: Complemental strand, 19570091 - 19569750
Alignment:
Q  95 tgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttaca 194  Q
    |||||||||||| | |||  ||||||||| |||||||||| | |||||| ||||| |||||||||||| | ||||||||| ||||||||| |||||||||    
T  19570091 tgctcaaggtttaatcaaaagacttatatactcaagcacgtaggcgagagactttctaaaatgtttgcac-aactgcaaacaagttaatttgttcttaca 19569993  T
Q  195 ctctttttaactagtg-agtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaataaatcccaactatttttctc 293  Q
    ||   |||||| |  | ||||||  |||||||||| |||  ||||    |||||||||| ||||||||| ||||||||||| ||||||| | |||| | |    
T  19569992 ctagatttaacaatggtagtgtaccctgaacaaatgaacaaactc----cttaggatttttaagatatagacttgaaaatatatcccaagtgttttgcac 19569897  T
Q  294 tatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgt 393  Q
    |||||||||||| ||| |  || ||||| ||||||  ||||||||||||||| || |||||||||||| || ||| |||||| | |||||||| ||||||    
T  19569896 tatttgatttgacagagtaatgacacagtaaaatagtagagtcttgttacttctttttcaggtcttcaacttcttatataggtagtgatttgagagacgt 19569797  T
Q  394 tggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatca 440  Q
    || |||||| |||||||| ||||||||| |||| |||||||||||||    
T  19569796 tgaagaagagtgtcagtgaaaatagagttgttgagaagctttgatca 19569750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 583 - 671
Target Start/End: Complemental strand, 24885197 - 24885109
Alignment:
Q  583 aactcacataataagacaaaagcttaagtggattctaggtcccttagattcaagtagcctgtcagattatgtgtctaatgtccttcaca 671  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24885197 aactcacataataagacaaaagcttatgtggattctaggtcccttagattcaagtagcctgtcagattctgtgtctaatgtccttcaca 24885109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 244 - 496
Target Start/End: Complemental strand, 21216767 - 21216515
Alignment:
Q  244 ttaggatttctaagatataaacttgaaaataaatcccaactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttac 343  Q
    |||||||||||||||||||||||||||||||||||| |  | |||| |  |||||||||||| ||| |  |||||||| ||||||  |||||||| ||||    
T  21216767 ttaggatttctaagatataaacttgaaaataaatcctaggtgttttgcgttatttgatttgacagagtaatggcacaggaaaatagtagagtcttattac 21216668  T
Q  344 ttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatcacca 443  Q
    || |||||  |||||||| ||||||||||| |||||||||| | |||||||||| |||  |  |||  ||||||||||||||  |||||||  ||||  |    
T  21216667 ttcttctttgggtcttcaactccttttatatgcaatgatttaagagacgttggataagcgttccagcacaaatagagtcgttaagaagcttcaatcaaga 21216568  T
Q  444 acattgtcccttttcctgatatggataaatccactagaaagtactttgaattt 496  Q
    ||| || |||||| ||||||||| |||| |||  |  ||||| ||||||||||    
T  21216567 acactggccctttgcctgatatgaataattccgttgaaaagtcctttgaattt 21216515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 51 - 265
Target Start/End: Complemental strand, 16525348 - 16525137
Alignment:
Q  51 taagactttaccctactcaatcacaactgactgagatttctatatgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttg 150  Q
    ||||||||| || | ||||||||||| ||| ||| | | |||  ||||||||||||||||||  |||||||||| ||||||||||| |||||| | |||     
T  16525348 taagactttccctttctcaatcacaattgattgaaactcctaggtgctcaaggtttcaccaaaagacttatatgttcaagcacgcaagcgagagattttc 16525249  T
Q  151 taaaatgtttgccccaactgcaaataagttaattggttcttacactctttttaacta-gtgagtgtaaactgaacaaataaacggactcacttcttagga 249  Q
    | ||||||||||||||||| |||| || |||||| |||||||||||   |||||| | |  | |||||||||||||||| |||  ||||    |||||||    
T  16525248 ttaaatgtttgccccaactacaaacaacttaatttgttcttacactggatttaacaatggtaatgtaaactgaacaaatgaacaaactc----cttagga 16525153  T
Q  250 tttctaagatataaac 265  Q
    |||| |||||||||||    
T  16525152 tttcaaagatataaac 16525137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 18303987 - 18304111
Alignment:
Q  66 ctcaatcacaactgactgagatttctatatgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgcccc 165  Q
    |||||| |||||||| ||||| | |||  ||||||||||||||||||| || |||||| ||||||||| || |||||| ||||| |||| | ||||||||    
T  18303987 ctcaattacaactgattgagactcctaggtgctcaaggtttcaccaagagagttatatactcaagcacacaggcgagagactttctaaattttttgcccc 18304086  T
Q  166 aactgcaaataagttaattggttct 190  Q
    ||||| ||| ||||||||| |||||    
T  18304087 aactgaaaacaagttaatttgttct 18304111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 331 - 399
Target Start/End: Complemental strand, 25936468 - 25936402
Alignment:
Q  331 agagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggaga 399  Q
    |||||||||||  |||||||||| |||||||||||||| ||||||||| ||||||| ||||||||||||    
T  25936468 agagtcttgtt--ttattcttcaagtcttcagctccttatataggcaaggatttgagagacgttggaga 25936402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 323 - 399
Target Start/End: Complemental strand, 24838625 - 24838550
Alignment:
Q  323 aaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggaga 399  Q
    |||||| |||| |||||||| ||| |||| |||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  24838625 aaaatagcagattcttgtta-ttactcttaaggtcttcagctccttatataggcaaagatttgagagacgttggaga 24838550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 317 - 434
Target Start/End: Original strand, 9824093 - 9824210
Alignment:
Q  317 cacagaaaaatatcagagtcttgttacttattcttcag-gtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaa 415  Q
    ||||| |||||||||||| ||||||| || ||||||   |||||||||||||| |||||| |  ||||||| ||| |||| |||||| || ||| |||||    
T  9824093 cacagtaaaatatcagagacttgtta-ttcttcttcgtcgtcttcagctccttatataggtagggatttgagagatgttgaagaagagtgccagcgcaaa 9824191  T
Q  416 tagagtcgttgtgaagctt 434  Q
    ||||||||||| |||||||    
T  9824192 tagagtcgttgagaagctt 9824210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 322 - 408
Target Start/End: Complemental strand, 30608520 - 30608435
Alignment:
Q  322 aaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtca 408  Q
    ||||||| ||||||||||||  |  ||||||||||||||||||| |||||||||||  ||||||| ||||| ||||||||| |||||    
T  30608520 aaaaatagcagagtcttgttgatc-ttcttcaggtcttcagctcattttataggcagggatttgagagacgatggagaagagtgtca 30608435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 431
Target Start/End: Original strand, 22825981 - 22826089
Alignment:
Q  322 aaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagt 421  Q
    ||||||| |||||| |||||| || ||||||| | |||||||||||| ||||||||| ||||||| ||| ||| ||||||| |||||| |||   |||||    
T  22825981 aaaaatagcagagtgttgtta-ttgttcttcaagccttcagctccttatataggcaaggatttgaaagatgtttgagaagaatgtcagcgcattaagagt 22826079  T
Q  422 cgttgtgaag 431  Q
    ||||| ||||    
T  22826080 cgttgagaag 22826089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 347 - 402
Target Start/End: Original strand, 18304280 - 18304335
Alignment:
Q  347 ttcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaaga 402  Q
    |||||||||||||||  |||||||||| ||| |||||||| |||||||||||||||    
T  18304280 ttcttcaggtcttcatgtccttttatatgcagtgatttgagagacgttggagaaga 18304335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 347 - 413
Target Start/End: Complemental strand, 24492670 - 24492604
Alignment:
Q  347 ttcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgca 413  Q
    |||||||||| |||| |||||||||||||||  ||||||| ||||||| ||||||| ||||| ||||    
T  24492670 ttcttcaggtattcaactccttttataggcagggatttgagagacgttcgagaagagtgtcattgca 24492604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 323 - 435
Target Start/End: Original strand, 31730392 - 31730501
Alignment:
Q  323 aaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtc 422  Q
    |||||| || |||||||||| | ||| |||| |||||| ||||||| ||||||||| ||||||| |||||||||||| |  |||||| |||   ||||||    
T  31730392 aaaatagcaaagtcttgtta-taattgttcaagtcttcggctccttatataggcaaagatttgagagacgttggagagg--tgtcagcgcattaagagtc 31730488  T
Q  423 gttgtgaagcttt 435  Q
    |||| ||||||||    
T  31730489 gttgagaagcttt 31730501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 323 - 402
Target Start/End: Complemental strand, 6999183 - 6999104
Alignment:
Q  323 aaaatatcagagtcttgttacttattcttca-ggtcttcagctccttttataggcaatgatttgatagacgttggagaaga 402  Q
    |||||| ||||||||||||| |  ||||||| ||||||| ||||||| ||||||||  ||||||| |||||||||||||||    
T  6999183 aaaatagcagagtcttgttaatc-ttcttcatggtcttctgctccttatataggcagggatttgagagacgttggagaaga 6999104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 9823887 - 9823939
Alignment:
Q  97 ctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaacttt 149  Q
    |||||||||||||||||  |||||| |||||||||||||| |||||| |||||    
T  9823887 ctcaaggtttcaccaagatacttatctgctcaagcacgcaggcgagagacttt 9823939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 303
Target Start/End: Original strand, 23110064 - 23110152
Alignment:
Q  211 agtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaataaatcccaactatttttctctatttgattt 303  Q
    |||||||| ||||||||| ||| |||||    ||||||||||||| ||||  ||||||||||||||||| || | |||| ||| |||||||||    
T  23110064 agtgtaaattgaacaaatgaacagactc----cttaggatttctacgatacgaacttgaaaataaatcctaagtgttttcctcaatttgattt 23110152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 400
Target Start/End: Original strand, 26013559 - 26013641
Alignment:
Q  317 cacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaa 400  Q
    ||||| |||||| ||||||||| ||| || ||||||||  ||||| |||||| |||| |||| ||||||| |||||||||||||    
T  26013559 cacagtaaaatagcagagtcttattattt-ttcttcagaacttcaactccttctataagcaaggatttgaaagacgttggagaa 26013641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 183; Significance: 1e-98; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 51 - 586
Target Start/End: Complemental strand, 9757071 - 9756534
Alignment:
Q  51 taagactttaccctactcaatcacaactgactgaga-tttctatatgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaacttt 149  Q
    |||||||||||||| || |||||||| ||||||||| ||||||  |||| |||| ||| ||||| |||||||||| ||||||||||| |||||| |||||    
T  9757071 taagactttaccctgcttaatcacaagtgactgagactttctaggtgctaaaggcttcgccaagagacttatatggtcaagcacgcaggcgagagacttt 9756972  T
Q  150 gtaaaatgtttgccccaactgcaaataagttaattggttcttacactctttttaactagtgagtgtaaactgaacaaataaacggactcacttcttagga 249  Q
     ||||||||||||||||||| |||| ||||||||  ||| ||||||| ||| |||||||| ||| |||||||||||||| ||| |||| ||| |||||||    
T  9756971 ctaaaatgtttgccccaactacaaacaagttaatatgtttttacact-tttctaactagtaagtataaactgaacaaatgaacagacttactccttagga 9756873  T
Q  250 tttctaagatataaacttgaaaataaatcccaactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattc 349  Q
    |||||||||||||| ||||||||  ||||  || | | || | ||||||||||||| ||| |||||||||| ||||||| |||||||||||||||| |||    
T  9756872 tttctaagatataagcttgaaaaataatcttaagtgtcttgcgctatttgatttgacagagttttggcacataaaaataacagagtcttgttacttcttc 9756773  T
Q  350 ttcaggtcttcagctccttttatagg-caatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatcaccaacatt 448  Q
    ||||||||||||||||||| |||||| |  |||||||| ||||||||||||||| || ||| |||||||||||||||| ||| |||||||||  ||| ||    
T  9756772 ttcaggtcttcagctccttatataggccgttgatttgagagacgttggagaagagtgccagcgcaaatagagtcgttgagaatctttgatcaagaacgtt 9756673  T
Q  449 gtcccttttcctgatatggataaatccactagaaagtactttgaattttttatgttg-aaggagaattatctgtttcttttctcgttcctaatgtccttt 547  Q
    | ||| || |||||||||||||  ||   | |||||| ||||||||||    || || ||| |||| |||||||| |||| || |||| | |||||| ||    
T  9756672 ggcccattgcctgatatggatacttctgttggaaagtcctttgaatttccattgctgaaagtagaagtatctgttgctttccttgttcttgatgtccgtt 9756573  T
Q  548 gtatggttgtacacgtaaacagaagaagacaaaagaact 586  Q
    || || |||||||| || |||||| ||||||||| ||||    
T  9756572 gtctgtttgtacacatagacagaaaaagacaaaataact 9756534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 317 - 434
Target Start/End: Complemental strand, 24006510 - 24006393
Alignment:
Q  317 cacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaat 416  Q
    ||||| |||||| |||||  |||||| || ||||||||||||||| |||| | |||||| |  ||||||| ||||||||||||||| ||||||||||| |    
T  24006510 cacagtaaaatagcagagagttgttagttcttcttcaggtcttcaactccgtatataggtagggatttgagagacgttggagaagagtgtcagtgcaatt 24006411  T
Q  417 agagtcgttgtgaagctt 434  Q
    |||||||||| |||||||    
T  24006410 agagtcgttgagaagctt 24006393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 250 - 415
Target Start/End: Original strand, 22638085 - 22638251
Alignment:
Q  250 tttctaagatataaacttgaaaataaa--tcccaactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttat 347  Q
    |||||||||||| |||||||| | |||  ||| || | |||| | ||||| ||||||||||| |  | | |||| |||||| ||||||||||||| |  |    
T  22638085 tttctaagatatgaacttgaatacaaaaatcctaagtgttttccgctattagatttgatagagtaatagaacagtaaaatagcagagtcttgttaatc-t 22638183  T
Q  348 tcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaa 415  Q
    ||||||||| ||||||||||| |||||||||  |||||| ||| ||||||||||||||||||| ||||    
T  22638184 tcttcaggttttcagctccttatataggcaagaatttgagagaagttggagaagattgtcagtacaaa 22638251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 347 - 426
Target Start/End: Complemental strand, 17496882 - 17496803
Alignment:
Q  347 ttcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttg 426  Q
    ||||||||||||||| |||||||||||||||  ||||||| |||| |||||||||| |||||| |||   ||||||||||    
T  17496882 ttcttcaggtcttcaactccttttataggcagggatttgagagacattggagaagagtgtcagcgcattaagagtcgttg 17496803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 511 - 584
Target Start/End: Complemental strand, 19223813 - 19223740
Alignment:
Q  511 gaattatctgtttcttttctcgttcctaatgtcctttgtatggttgtacacgtaaacagaagaagacaaaagaa 584  Q
    |||||||| ||| |||||||||||||| |||||||||||   || ||||||||| || ||||||||||||||||    
T  19223813 gaattatccgttgcttttctcgttcctgatgtcctttgtcctgtcgtacacgtagacggaagaagacaaaagaa 19223740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 66 - 154
Target Start/End: Complemental strand, 24285860 - 24285771
Alignment:
Q  66 ctcaatcacaactgactgagatttc-tatatgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaa 154  Q
    ||||||||||||||||||||| ||| ||  ||||||| |||| |||||| ||||| | | ||||||||||||||||||| ||||| ||||    
T  24285860 ctcaatcacaactgactgagacttcctagttgctcaaagtttgaccaagagacttgtcttctcaagcacgcatgcgagatactttctaaa 24285771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 347 - 413
Target Start/End: Original strand, 15440575 - 15440639
Alignment:
Q  347 ttcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgca 413  Q
    ||||||| |||||||||||||| ||||||||| ||||||| |||| |||||||||  ||||||||||    
T  15440575 ttcttcaagtcttcagctccttatataggcaaagatttgagagacattggagaag--tgtcagtgca 15440639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 347 - 426
Target Start/End: Complemental strand, 17316620 - 17316541
Alignment:
Q  347 ttcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttg 426  Q
    ||||||| ||||||| || ||| ||||||||| ||||||| ||||||||||||||| |||||| |||   ||||||||||    
T  17316620 ttcttcaagtcttcaacttcttatataggcaaggatttgagagacgttggagaagagtgtcagcgcattaagagtcgttg 17316541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 22637910 - 22637985
Alignment:
Q  69 aatcacaactgactgagattt-ctatatgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgaga 143  Q
    ||||| |||||| ||||| || ||| ||||||||||||||||| ||  ||||||||||||||||||| ||||||||    
T  22637910 aatcaaaactgattgagacttactaaatgctcaaggtttcaccgagacacttatatgctcaagcacgtatgcgaga 22637985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 350 - 431
Target Start/End: Original strand, 12397682 - 12397763
Alignment:
Q  350 ttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaag 431  Q
    |||| |||||||||||||| ||||||||| ||||||| |||||||| |||||| ||| | ||||   |||||||||| ||||    
T  12397682 ttcaagtcttcagctccttatataggcaaggatttgagagacgttgaagaagagtgttaatgcattaagagtcgttgagaag 12397763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 665
Target Start/End: Complemental strand, 9756507 - 9756424
Alignment:
Q  583 aactcacataataagacaaaagcttaagtggattctaggtcccttagattcaagtagcc-tgtcagattatgtgtctaatgtcc 665  Q
    |||||||| ||||||||||||||||| ||||| ||| |||||||   || |||||||||  |||||||| || |||||||||||    
T  9756507 aactcacagaataagacaaaagcttacgtggaatctgggtccctcgtatccaagtagccaagtcagattctgagtctaatgtcc 9756424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 434
Target Start/End: Complemental strand, 12669318 - 12669247
Alignment:
Q  363 ctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctt 434  Q
    |||||||||||||||  ||||||| ||||||||| ||||| |||||  |||  ||||||||||| |||||||    
T  12669318 ctccttttataggcatggatttgagagacgttggtgaagagtgtcaacgcatttagagtcgttgagaagctt 12669247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 347 - 401
Target Start/End: Complemental strand, 31584553 - 31584499
Alignment:
Q  347 ttcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaag 401  Q
    ||||||| |||||||| ||||| |||| ||||||| |||| ||||||||||||||    
T  31584553 ttcttcaagtcttcagttccttatatatgcaatgaattgagagacgttggagaag 31584499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 333 - 409
Target Start/End: Original strand, 33438780 - 33438855
Alignment:
Q  333 agtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcag 409  Q
    |||||||||| | ||| |||| |||||||| ||||| |||| |||| |||| || ||||||||||||||| ||||||    
T  33438780 agtcttgtta-tcatttttcaagtcttcagttccttatataagcaaagattagagagacgttggagaagagtgtcag 33438855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 358 - 434
Target Start/End: Complemental strand, 37283552 - 37283476
Alignment:
Q  358 ttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctt 434  Q
    ||||| ||||| ||||| || |||||||| ||||||||||||||| |||||  ||| | |||||| ||| |||||||    
T  37283552 ttcaggtccttatatagacagtgatttgagagacgttggagaagagtgtcaacgcataaagagtcattgagaagctt 37283476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 170; Significance: 7e-91; HSPs: 2)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 51 - 470
Target Start/End: Original strand, 11683 - 12103
Alignment:
Q  51 taagactttaccctactcaatcacaactgactgagatttc-tatatgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaacttt 149  Q
    |||||||||||||| |||||| |||||||||||||| ||| ||| |||| |||| |||  |||| |||||||||||||||||||||| ||||||||||||    
T  11683 taagactttaccctgctcaataacaactgactgagacttcctatgtgcttaaggcttcgtcaagagacttatatgctcaagcacgcaggcgagaaacttt 11782  T
Q  150 gtaaaatgtttgccccaactgcaaataagttaattggttcttacactctttttaactagtgagtgtaaactgaacaaataaacggactcacttcttagga 249  Q
     |||||| ||| ||| ||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||  ||| |||||||| |||||||    
T  11783 ataaaatctttaccc-aactgcaaacaagttaatttgttcttacactctttctaactagtgagtgtaaactaaacaaaagaacagactcactccttagga 11881  T
Q  250 tttctaagatataaacttgaaaataaatcccaactatttttct-ctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttatt 348  Q
    |||| || |||| ||||||||||  ||||| ||   ||||| | ||||||||||||| |    |||||||||||||| || ||||||||| || ||| ||    
T  11882 tttcaaaaatattaacttgaaaaataatcctaagagtttttgtgctatttgatttgacaattctttggcacagaaaactagcagagtcttattgcttctt 11981  T
Q  349 cttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatcaccaacatt 448  Q
    |||||||| |||| ||||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||| | |||||||||||||| ||  ||    
T  11982 cttcaggtattcatctccttttataggtagtgatttgagagacgttggagaagagtgtcagtgtaaatagagtcgtggagaagctttgatcacgaatgtt 12081  T
Q  449 gtcccttttcctgatatggata 470  Q
      |||||| ||||||| |||||    
T  12082 agccctttgcctgatacggata 12103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 583 - 642
Target Start/End: Original strand, 7509 - 7568
Alignment:
Q  583 aactcacataataagacaaaagcttaagtggattctaggtcccttagattcaagtagcct 642  Q
    |||||||| |||||||||||| |||| ||||||||||||||||| |||| || |||||||    
T  7509 aactcacagaataagacaaaaacttacgtggattctaggtccctcagatccatgtagcct 7568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 169; Significance: 3e-90; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 51 - 586
Target Start/End: Complemental strand, 16197997 - 16197461
Alignment:
Q  51 taagactttaccctactcaatcacaactgactgagatttc-tatatgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaacttt 149  Q
    ||||| ||||||||  |||||||||||||||||||| ||| ||  ||||||| ||||||||||| |||||||||| |||| |||||| |  ||| |||||    
T  16197997 taagaatttaccctgttcaatcacaactgactgagaattcatacgtgctcaatgtttcaccaagagacttatatgttcaaccacgcaggaaagagacttt 16197898  T
Q  150 gtaaaatgtttgccccaactgcaaataagttaattggttcttacactctttttaactagtgagtgtaaactgaacaaataaacggactcacttcttagga 249  Q
     |||||| ||  ||||||||||| | ||||||||  ||||||||||||||| |||||||||| |||||||||||||||| ||| |||||||| |||||||    
T  16197897 ctaaaatattgtccccaactgcacacaagttaatgtgttcttacactctttctaactagtgaatgtaaactgaacaaatgaacagactcactccttagga 16197798  T
Q  250 tttctaagatataaacttgaaaataaatcccaactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattc 349  Q
    |||||||||||||||| |||||||||||   ||||  ||| | ||||||||||||| ||| ||||| |||||||||||| |||||||||||| ||| |||    
T  16197797 tttctaagatataaacctgaaaataaattgtaactgctttgcgctatttgatttgacagagttttgacacagaaaaatagcagagtcttgttgcttcttc 16197698  T
Q  350 ttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatcaccaacattg 449  Q
    || ||||||||| || ||||||||| || |||||||| ||||||| ||||| | || ||  | ||| | |||||||| |||||||||| ||| ||| |||    
T  16197697 tttaggtcttcatcttcttttatagacagtgatttgagagacgttcgagaatagtgccaacgaaaacatagtcgttgagaagctttgaccacgaacgttg 16197598  T
Q  450 tcccttttcctgatatggataaatccactagaaagtactttgaattttttatgttgaaggagaattatctgtttcttttctcgttcctaatgtcctttgt 549  Q
     || ||| | |||||| || |  ||   | ||||||||||||| |||  | || ||||| |||||||| ||| ||| || || ||| | |||||||||||    
T  16197597 accttttgcttgatattgacagttctgttggaaagtactttgagtttcctctgctgaagaagaattatttgtgtctcttttcattcttgatgtcctttgt 16197498  T
Q  550 atggttgtacacgtaaacagaagaagacaaaagaact 586  Q
     | |||||| ||||| ||||||| |||||||||||||    
T  16197497 ctagttgtatacgtagacagaaggagacaaaagaact 16197461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 95 - 401
Target Start/End: Original strand, 8685285 - 8685587
Alignment:
Q  95 tgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttaca 194  Q
    |||||||||||||| ||||  |||||| | |||||||| ||| | |||| ||||| ||||||||||||   |||| |||| ||||||||| |||||||||    
T  8685285 tgctcaaggtttcagcaagatacttatctactcaagcatgcaggtgagatactttctaaaatgtttgcat-aactacaaacaagttaatttgttcttaca 8685383  T
Q  195 ctctttttaacta-gtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaataaatcccaactatttttctc 293  Q
    ||   |||||| | |  |||| ||||||||||| | ||| |||||    ||||||||||||||||||||||||||||||||||||| || | |||| |      
T  8685384 ctagatttaacaatgatagtgcaaactgaacaattgaacagactc----cttaggatttctaagatataaacttgaaaataaatcctaagtgttttgcat 8685479  T
Q  294 tatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgt 393  Q
    |||||||||||||||| |  ||||||| ||||||| |||||||||||||||| |||||| |||||||| |||| |||||||||| | |||||| ||||||    
T  8685480 tatttgatttgatagagtaatggcacaaaaaaatagcagagtcttgttacttcttcttcgggtcttcaactccctttataggcagttatttgagagacgt 8685579  T
Q  394 tggagaag 401  Q
    ||||||||    
T  8685580 tggagaag 8685587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 51 - 228
Target Start/End: Original strand, 17435824 - 17436002
Alignment:
Q  51 taagactttaccctactcaatcacaactgactgagatttctata-tgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaacttt 149  Q
    |||||||||||| | ||||||||||||| ||||||| ||| |   ||||||||||||||| | | |||||||||||||||||||||| || ||| |||||    
T  17435824 taagactttaccatgctcaatcacaactaactgagacttccaaggtgctcaaggtttcacaaggagacttatatgctcaagcacgcaggcaagagacttt 17435923  T
Q  150 gtaaaatgtttgccccaactgcaaataagttaattggttcttacactctttttaactagtgagtgtaaactgaacaaat 228  Q
     |||||||||| ||||||||||||| || |||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  17435924 ctaaaatgtttaccccaactgcaaacaaattaatttgttcttacactctttctaactagtgagtgtaaactgaacaaat 17436002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 97 - 472
Target Start/End: Complemental strand, 26653840 - 26653471
Alignment:
Q  97 ctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttacact 196  Q
    ||||||||||||||||| ||||||||||||||||| |||| |||||| | ||| |||| |||||     ||  | ||| ||||||||| |||||||||||    
T  26653840 ctcaaggtttcaccaagagacttatatgctcaagcgcgcaggcgagagattttctaaa-tgtttat---aaaagtaaacaagttaatttgttcttacact 26653745  T
Q  197 ctttttaactagtg-agtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaataaa--tcccaactatttttctc 293  Q
       |||||| |  | |||||||||||||||||| ||| |||||     ||||||||||||||||||||||||||| | |||  ||  || | |||| | |    
T  26653744 tgatttaacaatggtagtgtaaactgaacaaatgaacagactct----ttaggatttctaagatataaacttgaatacaaaaatcataagtgttttgcgc 26653649  T
Q  294 tatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgt 393  Q
    |||| ||||||| ||| |  || ||||| |||||| ||||||||||||| |  ||||| | |||||||||||||| |||||||| |||||||| |||| |    
T  26653648 tattagatttgacagagtaatgacacagtaaaatagcagagtcttgttaatc-ttctttaagtcttcagctccttatataggcagtgatttgagagacat 26653550  T
Q  394 tggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatcaccaacattgtcccttttcctgatatggataaa 472  Q
    ||||||| | ||  |  ||||||||||||| || |||| ||| || |  ||| ||| ||||||||||||||| ||||||    
T  26653549 tggagaaaagtgctatcgcaaatagagtcggtgagaagatttaattaagaacgttggcccttttcctgatatagataaa 26653471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 87 - 400
Target Start/End: Complemental strand, 26655180 - 26654874
Alignment:
Q  87 tttctatatgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattgg 186  Q
    |||||| ||||||| |||||||||||| |||||||||||||||||||||| |||||||||||| | |||||||| |    |  | ||| || |||||| |    
T  26655180 tttctaaatgctcatggtttcaccaagagacttatatgctcaagcacgcaggcgagaaactttct-aaatgtttac----aaagaaaacaaattaatttg 26655086  T
Q  187 ttcttacactctttttaacta-gtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaat--aaatcccaac 283  Q
    |||||||||| | |||||| | |  |||||||||||||||||||||| |||||     ||| |||||||| ||||| |||||||| ||  |||||| ||     
T  26655085 ttcttacactttatttaacaatggtagtgtaaactgaacaaataaacagactc----tttacgatttctatgatatgaacttgaatataaaaatcctaag 26654990  T
Q  284 tatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatt 383  Q
    | ||||   ||||| ||||||| ||| |  || ||||  |||||| || |||||||||   | ||||||||||||||| |||||| |||||||| |||||    
T  26654989 tgttttgtgctattagatttgacagagtaatgacacactaaaataacatagtcttgtt-gatcttcttcaggtcttcaactccttatataggcagtgatt 26654891  T
Q  384 tgatagacgttggagaa 400  Q
    ||| |||||||||||||    
T  26654890 tgagagacgttggagaa 26654874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 21824097 - 21824199
Alignment:
Q  95 tgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaac-tttgtaaaatgtttgccccaactgcaaataagttaattggttcttac 193  Q
    ||||||||||||||||||||||||| |||||| |||||||||  ||||| || ||| |||||||||||||| |||  |||| ||||||||| ||||||||    
T  21824097 tgctcaaggtttcaccaagggacttctatgctaaagcacgcagacgagagacttttctaaaatgtttgccctaacaacaaacaagttaatttgttcttac 21824196  T
Q  194 act 196  Q
    |||    
T  21824197 act 21824199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 100 - 196
Target Start/End: Original strand, 21823242 - 21823339
Alignment:
Q  100 aaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttg-taaaatgtttgccccaactgcaaataagttaattggttcttacact 196  Q
    ||||||||| |||| |||||||||| |||||||||||  ||||| |||||  |||||||||||||| ||| ||||| ||||||||| |||||||||||    
T  21823242 aaggtttcatcaagagacttatatggtcaagcacgcagtcgagagacttttctaaaatgtttgccctaacagcaaacaagttaatttgttcttacact 21823339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 136
Target Start/End: Complemental strand, 22132759 - 22132688
Alignment:
Q  66 ctcaatcacaactgactgagatttc-tatatgctcaaggtttcaccaagggacttatatgctcaagcacgca 136  Q
    |||||||| |||||| ||||| ||| || |||||||||||||||||||| ||||||||||||||||||||||    
T  22132759 ctcaatcaaaactgattgagacttcctaaatgctcaaggtttcaccaagagacttatatgctcaagcacgca 22132688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 583 - 671
Target Start/End: Original strand, 25348221 - 25348309
Alignment:
Q  583 aactcacataataagacaaaagcttaagtggattctaggtcccttagattcaagtagcctgtcagattatgtgtctaatgtccttcaca 671  Q
    |||||||| ||||| |||||| |||| ||||||||||||||||| |||| ||| || ||||||| ||| || |||| ||||||||||||    
T  25348221 aactcacagaataacacaaaatcttacgtggattctaggtccctgagatccaattatcctgtcaaattttgcgtctgatgtccttcaca 25348309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 347 - 402
Target Start/End: Complemental strand, 21548531 - 21548476
Alignment:
Q  347 ttcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaaga 402  Q
    |||||||||||||||||||||||||||||||  ||||||| || ||||||||||||    
T  21548531 ttcttcaggtcttcagctccttttataggcagggatttgagaggcgttggagaaga 21548476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 496
Target Start/End: Complemental strand, 16152509 - 16152299
Alignment:
Q  286 tttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttg 385  Q
    |||| ||| |||| |||||| ||| | ||| || ||||||||| |||||||||||| ||| ||||||| | || || |||||| |||||| | |||  ||    
T  16152509 ttttgctcaatttaatttgacagagtattgacatagaaaaatagcagagtcttgtttcttcttcttcatgcctgcaactccttatataggtactgaaatg 16152410  T
Q  386 atagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatcaccaacattgtcccttttcctgatatggataaatccactagaaagt 485  Q
    | |||||||||| |||| || ||| ||||||| | | |||| ||||||   ||||  ||  ||| ||||||| ||||||||||||| |||  | ||||||    
T  16152409 agagacgttggacaagagtgccagcgcaaataaatttgttgagaagctccaatcaagaatgttgcccctttttctgatatggataattccgttggaaagt 16152310  T
Q  486 actttgaattt 496  Q
     ||||||||||    
T  16152309 cctttgaattt 16152299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 330 - 471
Target Start/End: Complemental strand, 26653403 - 26653263
Alignment:
Q  330 cagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtga 429  Q
    ||||||||||||| |  ||||| | |||| ||||||||| |||||| | |||||||| | ||||||||||| | |   |  |||||||||||||||| ||    
T  26653403 cagagtcttgttaatc-ttctttaagtctccagctccttatataggtagtgatttgagatacgttggagaaaagttctatcgcaaatagagtcgttgaga 26653305  T
Q  430 agctttgatcaccaacattgtcccttttcctgatatggataa 471  Q
    || ||| ||||  ||| ||| |||||||||||||||||||||    
T  26653304 agatttaatcaagaacgttggcccttttcctgatatggataa 26653263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 354 - 434
Target Start/End: Complemental strand, 17417665 - 17417585
Alignment:
Q  354 ggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctt 434  Q
    ||||||||||||||| ||||| ||  ||||||| ||||||||||||||| || ||| ||| | ||||| |||| |||||||    
T  17417665 ggtcttcagctccttatatagacatggatttgagagacgttggagaagagtgccagcgcataaagagttgttgagaagctt 17417585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 583 - 672
Target Start/End: Original strand, 24216131 - 24216220
Alignment:
Q  583 aactcacataataagacaaaagcttaagtggattctaggtcccttagattcaagtagcct-gtcagattatgtgtctaatgtccttcacag 672  Q
    |||||| | ||||||||||||||||| ||||||||| |||||||| || | | ||||||| ||||| || ||||| | |||||||||||||    
T  24216131 aactcatagaataagacaaaagcttacgtggattctgggtcccttcgaatgacgtagcctagtcagcttctgtgt-tgatgtccttcacag 24216220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 161; Significance: 2e-85; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 116 - 582
Target Start/End: Original strand, 5825945 - 5826413
Alignment:
Q  116 acttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttacactctttttaacta-gtgagtg 214  Q
    |||||||||| ||| ||||||||| ||  ||||| |||||||||||||||||||||||| ||||||||| ||||||||||| | |||||| | |  ||||    
T  5825945 acttatatgcccaaacacgcatgcaagtgactttctaaaatgtttgccccaactgcaaacaagttaatttgttcttacactatatttaacaatgatagtg 5826044  T
Q  215 taaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaataaatcccaactatttttctctatttgatttgatagaatttt 314  Q
    |||||| ||||| | ||| || ||||| ||||||||||||||||||||||||||||||||||||  || | |||| |  |||||||| ||| ||| ||||    
T  5826045 taaactaaacaattgaacagattcactccttaggatttctaagatataaacttgaaaataaatcgtaagtgttttgcgttatttgatatgacagagtttt 5826144  T
Q  315 ggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaa 414  Q
    |||||| |||| || |||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||| |||||| |||||| | |||||| ||||    
T  5826145 ggcacaaaaaagtagcagagtcttgttgcttcttcttcaggtcttcagctccttttataggcagtgatttgagagacgtgggagaaaagtgtcagcgcaa 5826244  T
Q  415 atagagtcgttgtgaagctttgatcaccaacattgtcccttttcctgatatggataaatccactagaaagtactttgaattttttatgttg-aaggagaa 513  Q
    ||| |||||||| |||||||||||||  ||  ||| |||||| ||||||||||||||      | |||||| ||||||||||| | || || ||| ||||    
T  5826245 ataaagtcgttgagaagctttgatcaagaaagttggccctttgcctgatatggataatcgtgttggaaagtcctttgaattttctttgctgaaagaagaa 5826344  T
Q  514 ttatctgtttcttttctcgttcctaatgtcctttgtatggttgtacacgtaaacagaagaagacaaaag 582  Q
    ||||| |||  | |  |||||| | ||||||||||| |||||| ||||||| | |||| ||||||||||    
T  5826345 ttatccgttgttctcttcgttcttgatgtcctttgtctggttgcacacgtagatagaaaaagacaaaag 5826413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 116 - 582
Target Start/End: Original strand, 5828544 - 5829012
Alignment:
Q  116 acttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttacactctttttaacta-gtgagtg 214  Q
    |||||||| | ||| ||||||||| ||  ||||| |||||||||||||||||||||||| ||||||||| ||||||||||| | |||||| | |  ||||    
T  5828544 acttatattcccaaacacgcatgcaagtgactttctaaaatgtttgccccaactgcaaacaagttaatttgttcttacactatatttaacaatgatagtg 5828643  T
Q  215 taaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaataaatcccaactatttttctctatttgatttgatagaatttt 314  Q
    |||||| ||||||| ||| || ||||| ||||||||||||||||||||||||||||||||||||  || | |||| |  |||||||| ||| ||| ||||    
T  5828644 taaactaaacaaatgaacagattcactccttaggatttctaagatataaacttgaaaataaatcgtaagtgttttgcgttatttgatatgacagagtttt 5828743  T
Q  315 ggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaa 414  Q
    |||||| |||| || |||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||| |||||| |||||| | |||||| ||||    
T  5828744 ggcacaaaaaagtagcagagtcttgttgcttcttcttcaggtcttcagctccttttataggcagtgatttgagagacgtgggagaaaagtgtcagcgcaa 5828843  T
Q  415 atagagtcgttgtgaagctttgatcaccaacattgtcccttttcctgatatggataaatccactagaaagtactttgaattttttatgttg-aaggagaa 513  Q
    ||| |||||||| |||||||||||||  ||  ||| |||||| ||||||||||||||      | |||||| ||||||||||| | || || ||| ||||    
T  5828844 ataaagtcgttgagaagctttgatcaagaaagttggccctttgcctgatatggataatcgtgttggaaagtcctttgaattttctttgctgaaagaagaa 5828943  T
Q  514 ttatctgtttcttttctcgttcctaatgtcctttgtatggttgtacacgtaaacagaagaagacaaaag 582  Q
    ||||| |||  | |  |||||| | ||||||||||| |||||| ||||||| | |||| ||||||||||    
T  5828944 ttatccgttgttctcttcgttcttgatgtcctttgtctggttgcacacgtagatagaaaaagacaaaag 5829012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 51 - 317
Target Start/End: Original strand, 5825478 - 5825746
Alignment:
Q  51 taagactttaccctactcaatcacaactgactgagatttc-tatatgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaacttt 149  Q
    |||||||||||||| ||| |||||||||||| ||||  || ||  | ||||||| || | ||||  |||||||||| ||| ||||||||| ||  |||||    
T  5825478 taagactttaccctgctcgatcacaactgacagagacctcctaggtactcaaggctttatcaagatacttatatgcccaaacacgcatgcaagtgacttt 5825577  T
Q  150 gtaaaatgtttgccccaactgcaaataagttaattggttcttacactctttttaacta-gtgagtgtaaactgaacaaataaacggactcacttcttagg 248  Q
     |||||||||||||||||||||||| ||||||||| ||||||||||| | |||||| | |  |||||||||| ||||| | ||| || ||||| ||||||    
T  5825578 ctaaaatgtttgccccaactgcaaacaagttaatttgttcttacactatatttaacaatgatagtgtaaactaaacaattgaacagattcactccttagg 5825677  T
Q  249 atttctaagatataaacttgaaaataaatcccaactatttttctctatttgatttgatagaattttggc 317  Q
    ||||||||||||||||||||||||||||||  || | |||| |  |||||||||||| ||| |||||||    
T  5825678 atttctaagatataaacttgaaaataaatcgtaagtgttttgcgttatttgatttgacagagttttggc 5825746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 323 - 496
Target Start/End: Complemental strand, 24987706 - 24987533
Alignment:
Q  323 aaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtc 422  Q
    |||||| |||||||||||| ||| ||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||| |||||  || |||||||||    
T  24987706 aaaatagcagagtcttgttgcttcttcttcaggtcttcagccccttttataggcagtgatttgaaagacgttggagaagagtgtcaacgctaatagagtc 24987607  T
Q  423 gttgtgaagctttgatcaccaacattgtcccttttcctgatatggataaatccactagaaagtactttgaattt 496  Q
    |||| ||||||||| |||  ||| ||| |||||| |||||||||||||| |||  | |||||| ||||||||||    
T  24987606 gttgagaagctttggtcaagaacgttggccctttgcctgatatggataattccgttggaaagtcctttgaattt 24987533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 95 - 328
Target Start/End: Original strand, 18565652 - 18565881
Alignment:
Q  95 tgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttaca 194  Q
    |||||||  |||||| ||| || ||||||||||||||| ||| ||| || ||||| |||||||||||| | |||| |||| ||||||||| ||||||||     
T  18565652 tgctcaatttttcacaaagagaattatatgctcaagcatgcaggcgtgagactttctaaaatgtttgcac-aactacaaaaaagttaatttgttcttact 18565750  T
Q  195 ctctttttaactagtg-agtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaataaatcccaactatttttctc 293  Q
    ||   |||||| |  | |||||||||||||||||| ||| |||||    ||||||||||||||||||||||||||||||||||||| || | |||| |      
T  18565751 cttgatttaacaatggtagtgtaaactgaacaaatgaacagactc----cttaggatttctaagatataaacttgaaaataaatcctaagtgttttgcgt 18565846  T
Q  294 tatttgatttgatagaattttggcacagaaaaata 328  Q
    |||||||||||| | |  |||||||||||||||||    
T  18565847 tatttgatttgacaaagatttggcacagaaaaata 18565881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 166 - 471
Target Start/End: Complemental strand, 23433336 - 23433042
Alignment:
Q  166 aactgcaaataagttaattggttcttacactctttttaacta-gtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaa 264  Q
    |||| |||| ||||||||| |||||||||||   |||||| | |  |||||||||||||||| | ||| |||||    ||||||||||||||||||||||    
T  23433336 aactacaaacaagttaatttgttcttacactagatttaacaatgatagtgtaaactgaacaattgaacagactc----cttaggatttctaagatataaa 23433241  T
Q  265 cttgaaaataaatcccaactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagct 364  Q
    ||||||||||||||| ||   |||| |  |||||||||||| | | |  ||||| ||||||||| |||||||||||||||| |||||| ||| |||| ||    
T  23433240 cttgaaaataaatcctaagggttttgcattatttgatttgacaaagtaatggcatagaaaaatagcagagtcttgttacttcttcttcgggttttcaact 23433141  T
Q  365 ccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatcaccaacattgtcccttttcctgata 464  Q
    |  |||||||||| | | |||| |||||||||||||| ||         ||||||||||||  |||||||  ||||  ||| |||||||||| |||||||    
T  23433140 cgctttataggcagttacttgagagacgttggagaagctt--------caatagagtcgttaagaagcttcaatcaagaacgttgtccctttgcctgata 23433049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 51 - 228
Target Start/End: Original strand, 21838539 - 21838716
Alignment:
Q  51 taagactttaccctactcaatcacaactgactgagatttctatatgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttg 150  Q
    ||||||||| || | || |||||||||||||| ||| | |||| ||||||||||||||||||| ||||||| ||||||||||| ||||| ||| |||||     
T  21838539 taagactttcccttgcttaatcacaactgactcagactcctatgtgctcaaggtttcaccaagagacttatctgctcaagcacacatgcaagagactttc 21838638  T
Q  151 taaaatgtttgccccaactgcaaataagttaattggttcttacactctttttaacta-gtgagtgtaaactgaacaaat 228  Q
    ||||||||||  | |||||| ||| ||||||||| |||||||||||   |||||| | |  ||||||||||||||||||    
T  21838639 taaaatgttt-acacaactgtaaacaagttaatttgttcttacactagatttaacaatggtagtgtaaactgaacaaat 21838716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 244 - 471
Target Start/End: Original strand, 13645034 - 13645263
Alignment:
Q  244 ttaggatttctaagatataaacttgaaaataaa--tcccaactatttttctctatttgatttgatagaattttggcacag-aaaaatatcagagtcttgt 340  Q
    |||| |||||||||||||||||||||| | |||  ||| || | ||||   ||||||||||||| ||| |  || ||||| |||||||  ||||||||||    
T  13645034 ttagcatttctaagatataaacttgaatacaaaaatcctaagtgttttgtgctatttgatttgacagagtaatgacacagtaaaaatagtagagtcttgt 13645133  T
Q  341 tacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatca 440  Q
    || |  |||||||||||||||||||||| |||||||| | |||||| |||   ||||||||| |||||| | |||||||||||||| |||||||  ||||    
T  13645134 taatc-ttcttcaggtcttcagctccttatataggcagtcatttgagagaatctggagaagagtgtcagagtaaatagagtcgttgagaagcttcaatca 13645232  T
Q  441 ccaacattgtcccttttcctgatatggataa 471  Q
      ||  ||| |||||| ||||||||||||||    
T  13645233 agaatgttggccctttgcctgatatggataa 13645263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 244 - 471
Target Start/End: Original strand, 13745459 - 13745688
Alignment:
Q  244 ttaggatttctaagatataaacttgaaaataaa--tcccaactatttttctctatttgatttgatagaattttggcacag-aaaaatatcagagtcttgt 340  Q
    |||| |||||||||||||||||||||| | |||  ||| || | ||||   ||||||||||||| ||| |  || ||||| |||||||  ||||||||||    
T  13745459 ttagcatttctaagatataaacttgaatacaaaaatcctaagtgttttgtgctatttgatttgacagagtaatgacacagtaaaaatagtagagtcttgt 13745558  T
Q  341 tacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatca 440  Q
    || |  |||||||||||||||||||||| |||||||| | |||||| |||   ||||||||| |||||| | |||||||||||||| |||||||  ||||    
T  13745559 taatc-ttcttcaggtcttcagctccttatataggcagtcatttgagagaatctggagaagagtgtcagagtaaatagagtcgttgagaagcttcaatca 13745657  T
Q  441 ccaacattgtcccttttcctgatatggataa 471  Q
      ||  ||| |||||| ||||||||||||||    
T  13745658 agaatgttggccctttgcctgatatggataa 13745688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 16227183 - 16227299
Alignment:
Q  110 caagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttacactctttttaactagt 209  Q
    |||| |||||||||||||||||||||| || ||| ||||| |||| |||||||||||||| |||| | ||||| | |||||||| || ||| ||||||||    
T  16227183 caagagacttatatgctcaagcacgcaggcaagagactttctaaagtgtttgccccaactacaaacacgttaacttgttcttacgctttttctaactagt 16227282  T
Q  210 gagtgtaaactgaacaa 226  Q
     || |||||||||||||    
T  16227283 aagcgtaaactgaacaa 16227299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 94 - 196
Target Start/End: Complemental strand, 20267693 - 20267592
Alignment:
Q  94 atgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttac 193  Q
    |||||||| ||||||||||| ||||||||| || ||||||| |||||||| ||||| ||||||||||| | |||||| ||| ||||||||| |||| |||    
T  20267693 atgctcaaagtttcaccaagagacttatattctaaagcacgtatgcgagagactttctaaaatgtttg-cacaactgaaaacaagttaatttgttcgtac 20267595  T
Q  194 act 196  Q
    |||    
T  20267594 act 20267592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 94 - 196
Target Start/End: Complemental strand, 21054322 - 21054221
Alignment:
Q  94 atgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttac 193  Q
    |||||||| ||||||||||| ||||||||| || ||||||| |||||||| ||||| ||||||||||| | |||||| ||| ||||||||| |||| |||    
T  21054322 atgctcaaagtttcaccaagagacttatattctaaagcacgtatgcgagagactttctaaaatgtttg-cacaactgaaaacaagttaatttgttcgtac 21054224  T
Q  194 act 196  Q
    |||    
T  21054223 act 21054221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 583 - 671
Target Start/End: Original strand, 5829049 - 5829137
Alignment:
Q  583 aactcacataataagacaaaagcttaagtggattctaggtcccttagattcaagtagcctgtcagattatgtgtctaatgtccttcaca 671  Q
    |||||||||||||||||||||||||| ||| |||||  ||| || |||| ||||||||  | || ||| ||||||| ||||||||||||    
T  5829049 aactcacataataagacaaaagcttacgtgaattctgagtctctcagatccaagtagctagccaaattctgtgtctgatgtccttcaca 5829137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 323 - 399
Target Start/End: Original strand, 18565024 - 18565099
Alignment:
Q  323 aaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggaga 399  Q
    ||||| ||||||||||||| ||| ||||||| | |||||||||||| ||||||||| ||||||| ||| ||||||||    
T  18565024 aaaatttcagagtcttgtt-cttcttcttcaagccttcagctccttatataggcaaggatttgagagatgttggaga 18565099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 583 - 672
Target Start/End: Complemental strand, 23432896 - 23432806
Alignment:
Q  583 aactcacataataagacaaaagcttaagtggattctaggtcccttagattcaagta-gcctgtcagattatgtgtctaatgtccttcacag 672  Q
    |||||||| ||||||||||||||||| || |||||  ||||||| |||| |||||| ||| |||||||| ||||| | ||||||| |||||    
T  23432896 aactcacagaataagacaaaagcttacgtagattcctggtccctcagatccaagtatgccagtcagattctgtgtttgatgtcctacacag 23432806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 583 - 671
Target Start/End: Original strand, 5826444 - 5826532
Alignment:
Q  583 aactcacataataagacaaaagcttaagtggattctaggtcccttagattcaagtagcctgtcagattatgtgtctaatgtccttcaca 671  Q
    ||||||||||||||||||||| |||| ||| |||||  ||| || |||| ||||||||| | || ||| || |||| ||||||||||||    
T  5826444 aactcacataataagacaaaatcttacgtgaattctgagtctctcagatccaagtagccagccaaattctgcgtctgatgtccttcaca 5826532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 136
Target Start/End: Original strand, 13644862 - 13644933
Alignment:
Q  66 ctcaatcacaactgactgagatttc-tatatgctcaaggtttcaccaagggacttatatgctcaagcacgca 136  Q
    ||||||||||||||| ||||| ||| ||  ||| ||||||||||||||| ||||| |||| |||||||||||    
T  13644862 ctcaatcacaactgattgagacttcctaagtgcacaaggtttcaccaagagacttgtatgttcaagcacgca 13644933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 136
Target Start/End: Original strand, 13745287 - 13745358
Alignment:
Q  66 ctcaatcacaactgactgagatttc-tatatgctcaaggtttcaccaagggacttatatgctcaagcacgca 136  Q
    ||||||||||||||| ||||| ||| ||  ||| ||||||||||||||| ||||| |||| |||||||||||    
T  13745287 ctcaatcacaactgattgagacttcctaagtgcacaaggtttcaccaagagacttgtatgttcaagcacgca 13745358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 471
Target Start/End: Original strand, 16227354 - 16227503
Alignment:
Q  325 aatatcagagtcttgttacttattcttc---aggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagt 421  Q
    |||| |||||||||||||||| ||||||   | ||||| | |||||| |||||| | || ||||| ||||  |||| |||| || ||  |||||||||||    
T  16227354 aataacagagtcttgttacttcttcttcttcatgtctttaactccttatataggtagtgttttgagagacagtggataagagtgccaacgcaaatagagt 16227453  T
Q  422 cgttgtgaagctttgatcaccaacattgtcccttttcctgatatggataa 471  Q
    ||||  |||||||  | ||| ||| ||| |||||| ||||||||||||||    
T  16227454 cgttaagaagcttcaaccacgaacgttggccctttgcctgatatggataa 16227503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 323 - 386
Target Start/End: Complemental strand, 20266121 - 20266058
Alignment:
Q  323 aaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttga 386  Q
    |||||| || |||||||||||||  |||||||||||||| |||||| ||||| || ||||||||    
T  20266121 aaaatagcatagtcttgttacttcatcttcaggtcttcatctccttatatagacagtgatttga 20266058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 323 - 386
Target Start/End: Complemental strand, 21052750 - 21052687
Alignment:
Q  323 aaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttga 386  Q
    |||||| || |||||||||||||  |||||||||||||| |||||| ||||| || ||||||||    
T  21052750 aaaatagcatagtcttgttacttcatcttcaggtcttcatctccttatatagacagtgatttga 21052687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 434
Target Start/End: Complemental strand, 24308969 - 24308892
Alignment:
Q  358 ttcagctccttttataggcaatgatttgatagacgttggagaa-gattgtcagtgcaaatagagtcgttgtgaagctt 434  Q
    |||| |||||| ||||||||| ||||||| |||||||||||||  | |||||| |||| ||||||| ||| |||||||    
T  24308969 ttcaactccttatataggcaaggatttgagagacgttggagaaccaatgtcagcgcaattagagtccttgagaagctt 24308892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 585 - 672
Target Start/End: Original strand, 18565950 - 18566038
Alignment:
Q  585 ctcacataataagacaaaagcttaagtggattctaggtcccttagattcaagta-gcctgtcagattatgtgtctaatgtccttcacag 672  Q
    |||||| |||||||||||||  || ||||||||| ||||||| |||| |||||| | | ||||| || | ||||| |||||||||||||    
T  18565950 ctcacaaaataagacaaaagtctacgtggattctgggtccctcagatccaagtatgtcagtcagcttctatgtctgatgtccttcacag 18566038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 158; Significance: 1e-83; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 51 - 586
Target Start/End: Complemental strand, 2642214 - 2641677
Alignment:
Q  51 taagactttaccctactcaatcacaactgactgagatttctatatgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttg 150  Q
    ||||||||| || | ||||||| ||||||| ||||| | |||  ||||||||||||||||||| |||||||||||||| ||||||| ||| || |||||     
T  2642214 taagactttcccttgctcaatcgcaactgattgagactcctaggtgctcaaggtttcaccaagagacttatatgctcatgcacgcaggcgggagactttc 2642115  T
Q  151 taaaatgtttgccccaactgcaaataagttaattggttcttacactctttttaactagtg-agtgtaaactgaacaaataaacggactcacttcttagga 249  Q
    |||||||||| |||||||||| || || |||||| |||||||||||   |||||| |  | |||||||| ||||||||| |||  |||||   |||||||    
T  2642114 taaaatgttt-ccccaactgccaacaaattaatttgttcttacacttgatttaacaatggtagtgtaaattgaacaaatgaacaaactcaacccttagga 2642016  T
Q  250 tttctaagatataaacttgaaaataaatcccaactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattc 349  Q
    |||||||||||||||||||||||||||||  || | ||||   ||||||||||||| ||| ||||||||||||||||||  |   ||||||||||| |||    
T  2642015 tttctaagatataaacttgaaaataaatcttaagtgttttgagctatttgatttgacagagttttggcacagaaaaatagtaa--tcttgttacttcttc 2641918  T
Q  350 ttcaggtctt-cagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatcaccaacatt 448  Q
    || ||||||| ||||| || ||||| ||| |||||||| |||||||| |||||| ||| ||||||||||||||| ||| |||||||||||||  ||| ||    
T  2641917 tttaggtctttcagcttctcttatatgcagtgatttgagagacgttgaagaagagtgttagtgcaaatagagtccttgagaagctttgatcaagaacgtt 2641818  T
Q  449 gtcccttttcctgatatggataaatccactagaaagtactttgaattttttatgttg-aaggagaattatctgtttc-ttttc-tcgttcctaatgtcct 545  Q
    | || |||||||||||||||||| |||  |  ||||| |||| |||||  | ||||| ||| |||||||| |||| | || || | |||| | |||||||    
T  2641817 gacctttttcctgatatggataattccgttgaaaagtcctttaaatttcctttgttgaaagaagaattatatgttgcattctctttgttcttgatgtcct 2641718  T
Q  546 ttgtatggttgtacacgtaaacagaagaagacaaaagaact 586  Q
    |||| |||||| |||| ||||||||||||||||||||||||    
T  2641717 ttgtctggttgcacacataaacagaagaagacaaaagaact 2641677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 186 - 470
Target Start/End: Original strand, 19414375 - 19414658
Alignment:
Q  186 gttcttacactctttttaactagtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaataaatcccaacta 285  Q
    |||||| |||||||| ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||| |||  | |     
T  19414375 gttcttgcactctttctaactagtgagtgtaaactgaacaaatgaacagactcactccttaggatttctaagatataaacttgaaaataa-tccttagtg 19414473  T
Q  286 tttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttg 385  Q
    |||| | ||||||||  ||| ||| ||||| |||||||||||||| |||||||||| ||| |||||||||||||||||| ||||||||| || |||||||    
T  19414474 ttttgcgctatttgacatgacagagttttgacacagaaaaatatctgagtcttgttgcttcttcttcaggtcttcagcttcttttatagacagtgatttg 19414573  T
Q  386 atagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatcaccaacattgtcccttttcctgatatggata 470  Q
    | |||||||| |||||| ||  || |||||||||||||||| |||||||  ||||| ||| ||| |||||| | |||||||||||    
T  19414574 agagacgttgaagaagagtgcaagcgcaaatagagtcgttgagaagcttcaatcacgaactttggccctttgcttgatatggata 19414658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 95 - 372
Target Start/End: Original strand, 4876079 - 4876356
Alignment:
Q  95 tgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttaca 194  Q
    |||||||||||| |||||| |||||||||||||||||||| |  | ||| ||||| |||||||||| ||||||||||||| ||||||||| |||||||||    
T  4876079 tgctcaaggttttaccaagagacttatatgctcaagcacgaagacaagagactttctaaaatgttttccccaactgcaaacaagttaatttgttcttaca 4876178  T
Q  195 ctctttttaacta-gtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaataaatcccaactatttttctc 293  Q
    || | |||||| | |  |||||||||||||||||| |||  ||||||| |||||||||||||||||||||||||| |||||||||| || | || | |      
T  4876179 ctatatttaacaatgatagtgtaaactgaacaaatgaacatactcactccttaggatttctaagatataaacttgtaaataaatcctaagtgttctgcgt 4876278  T
Q  294 tatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttat 372  Q
    |||||||||||  ||| |||||||||||||||||| || ||||||||| ||| ||||||| ||||||||||||||||||    
T  4876279 tatttgatttg-cagagttttggcacagaaaaatagcaaagtcttgttgcttcttcttcaagtcttcagctccttttat 4876356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 66 - 496
Target Start/End: Original strand, 17915181 - 17915606
Alignment:
Q  66 ctcaatcacaactgactgagatttctatatgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttg-ccc 164  Q
    ||||||||||| ||| ||||| | |||| ||| ||||||||||||||| |||||||||||||||||||||| | |||| ||||| ||||||| ||| |||    
T  17915181 ctcaatcacaa-tgattgagactcctatgtgcacaaggtttcaccaagagacttatatgctcaagcacgcaagtgagagactttctaaaatggttgaccc 17915279  T
Q  165 caactgcaaataagttaattggttcttacactctttttaactagtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaa 264  Q
    ||| |||||| ||||||||| ||||||||||| ||| |||  | |  ||||||||| ||||||| |||  |||||    |||||||||||||||||| ||    
T  17915280 caagtgcaaagaagttaatttgttcttacactttttctaagcaattggtgtaaactaaacaaatgaacatactca----ttaggatttctaagatatgaa 17915375  T
Q  265 cttgaaaataaatcccaactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagct 364  Q
     |||||||||||||  || |||||| | ||||| ||||||| ||| |  |||||||  ||||||||||||| ||||||||| || |||||||||||| ||    
T  17915376 -ttgaaaataaatcataagtattttgcgctattagatttgacagagtaatggcacaataaaatatcagagttttgttacttctttttcaggtcttcaact 17915474  T
Q  365 ccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatcaccaacattgtcccttttcctgata 464  Q
    ||||| ||||||| |||||||| |||  |||||||||| ||  |  ||||||| | |||||| |||||||| ||||  ||| |||  ||| | |||||||    
T  17915475 cctttgataggcagtgatttgagagatattggagaagagtgaaaacgcaaataaaatcgttgagaagctttcatcaagaactttggtcctctgcctgata 17915574  T
Q  465 tggataaatccactagaaagtactttgaattt 496  Q
    |||||||  ||| | |||||| ||||||||||    
T  17915575 tggataatcccattggaaagtcctttgaattt 17915606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 221 - 584
Target Start/End: Complemental strand, 10984090 - 10983723
Alignment:
Q  221 gaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaataaa---tcccaactatttttctctatttgatttgatagaattttggc 317  Q
    |||||||| |||  |||||||  ||||||||||||||||||||||||||||| |||   || | ||| |||| |  |||||||||||| | | |||||||    
T  10984090 gaacaaatgaacaaactcactctttaggatttctaagatataaacttgaaaaaaaaaaatcactactgttttgcattatttgatttgacaaagttttggc 10983991  T
Q  318 acagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaata 417  Q
    ||| ||||||| |||||||||||| ||| |||||||| ||||||||  |||||||||| | |||||||| ||||||||||||||| |||||| |||||||    
T  10983990 acaaaaaaatagcagagtcttgttgctttttcttcagatcttcagcatcttttataggtagtgatttgagagacgttggagaagaatgtcagcgcaaata 10983891  T
Q  418 gagtcgttgtgaagctttgatcaccaacattgtcccttttcctgatatggataaatccactagaaagtactttgaattttttatgttg-aaggagaatta 516  Q
    ||||| ||| |||| ||||||||  ||  ||| |||||| ||||||||||||||  ||  | |||||||||||||||||  | || || ||  | |||||    
T  10983890 gagtcattgagaaggtttgatcatgaatgttggccctttgcctgatatggataatcccgttggaaagtactttgaatttcctttgctgaaaataaaatta 10983791  T
Q  517 tctgtttcttttctcgttcctaatgtcctttgtatggttgtacacgtaaacagaagaagacaaaagaa 584  Q
    | |||| || ||||||||| | ||||||||||| |||||||||||||| |||| |||||||| |||||    
T  10983790 tatgttcctcttctcgttcttgatgtcctttgtgtggttgtacacgtagacagtagaagacagaagaa 10983723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 51 - 586
Target Start/End: Complemental strand, 19842997 - 19842457
Alignment:
Q  51 taagactttaccctactcaatcacaactgactgagatttc-tatatgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaacttt 149  Q
    |||||||||||||| ||||||||||||| | ||||| ||| ||  |||| |||||||||||||| |||||||||| ||||||||||| |  ||| | |||    
T  19842997 taagactttaccctgctcaatcacaacttattgagacttcctaggtgcttaaggtttcaccaagagacttatatgatcaagcacgcacgtaagagaattt 19842898  T
Q  150 gtaaaatgtttgccccaactgcaaataagttaattggttcttacactctttttaactagtgagtgtaaactgaacaaataaacggactcacttcttagga 249  Q
     ||| ||| || |||||| |||||| ||||||||| ||||||||||| ||| |||| | | | ||||||||||||| || ||| || ||| | ||||  |    
T  19842897 ctaatatgctttccccaattgcaaacaagttaatttgttcttacactatttctaacaaattattgtaaactgaacatatgaacagaatcattccttataa 19842798  T
Q  250 tttctaagatat-aaacttgaaaataaatcccaactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttatt 348  Q
    |||||||||||| ||| |||||||| ||| | || | |||| | || |||||||||| ||| ||||| ||||||||||||   |||| ||||| ||| ||    
T  19842797 tttctaagatataaaatttgaaaatcaatgctaattgttttacgctgtttgatttgacagagttttgccacagaaaaatagatgagtattgtt-cttttt 19842699  T
Q  349 ct---tcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatcaccaac 445  Q
    ||   |||  |||||| ||||||||||| |||||||||||| ||  ||||||||||| ||||||  |||| || ||||||  ||| |||||||||  ||     
T  19842698 ctttctcatatcttcaactccttttatatgcaatgatttgagagctgttggagaagagtgtcagcacaaagagtgtcgttaagaaactttgatcaagaat 19842599  T
Q  446 attgtcccttttcctgatatggataaatccactagaaagtactttgaattttttatgttg-aaggagaattatctgtttcttttctcgttcctaatgtcc 544  Q
     |||  | |||  |||||||||||||      | ||| || ||||||||||  | ||||| ||| | |||||  |||| || || |||||||| ||||||    
T  19842598 gttggtcgtttgtctgatatggataatcatgttggaacgtcctttgaatttcctttgttgaaagaaaaattagatgttgctcttttcgttccttatgtcc 19842499  T
Q  545 tttgtatggttgtacacgtaaacagaagaagacaaaagaact 586  Q
     || | |||||||||||||| |||||||||||||||||||||    
T  19842498 cttttctggttgtacacgtagacagaagaagacaaaagaact 19842457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 243 - 440
Target Start/End: Original strand, 2277945 - 2278142
Alignment:
Q  243 cttaggatttctaagatataaacttgaaaataaatcccaactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgtta 342  Q
    |||| |||||| |||||||||||||| |||||||||   | |  | | | ||||||||||||| | | |  ||||| || ||||||  | ||||||||||    
T  2277945 cttatgatttccaagatataaacttggaaataaatcttgagttatctgccctatttgatttgagaaagtaatggcatagtaaaatagtaaagtcttgtta 2278044  T
Q  343 cttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatca 440  Q
    ||| ||||||| |||||||||| ||| |||| ||| |||||||| ||||||||||||||| |||||||||||||||||| |||| |||||||||||||    
T  2278045 cttcttcttcatgtcttcagcttcttatatatgcagtgatttgagagacgttggagaagagtgtcagtgcaaatagagttgttgagaagctttgatca 2278142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 95 - 279
Target Start/End: Complemental strand, 9704674 - 9704494
Alignment:
Q  95 tgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttaca 194  Q
    ||||||||| || |||||| ||||||||||| ||||||| || |||||| ||||| |||||| ||| ||||||||||||| ||||||||  |||||||||    
T  9704674 tgctcaaggatttaccaagagacttatatgcgcaagcacacaggcgagatactttctaaaatattttccccaactgcaaacaagttaatatgttcttaca 9704575  T
Q  195 ctctttttaac-tagtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaataaatcc 279  Q
    || ||| ||||  ||| ||| |||||||||||||| ||| |    |||||||||| ||||||||||||| | ||||||||||||||    
T  9704574 ctatttctaacaaagttagtttaaactgaacaaatgaacag----acttcttagggtttctaagatatata-ttgaaaataaatcc 9704494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 332 - 584
Target Start/End: Complemental strand, 48358354 - 48358098
Alignment:
Q  332 gagtcttgtta--cttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtga 429  Q
    |||||||||||  ||| ||||| | |||||||||||||| |||| ||| | |||||| |  | |||||||||| || ||||| |||||||||||||| ||    
T  48358354 gagtcttgttattcttcttcttaatgtcttcagctccttatatatgcagtcatttgagatgcattggagaagagtgccagtgtaaatagagtcgttgaga 48358255  T
Q  430 agctttgatcaccaacattgtcccttttcctgatatggataaatccactagaaagtactttgaattttttatgttgaaggagaattatctgtttcttt-- 527  Q
    |||||  ||||  ||| ||| |||||| |||||||||||||| |||  |  | ||| ||||||||||  | |||||||| ||||||||||||| | ||      
T  48358254 agcttcaatcaagaacgttggccctttgcctgatatggataattccgttgaatagtcctttgaatttcctttgttgaagtagaattatctgttgcattcc 48358155  T
Q  528 tctcgttcctaatgtcctttgtatggttgtacacgtaaacagaagaagacaaaagaa 584  Q
    | | |||  | | |||||||||||| ||| ||||||| |||||||||||||||||||    
T  48358154 ttttgttattgaggtcctttgtatgtttgcacacgtagacagaagaagacaaaagaa 48358098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 51 - 159
Target Start/End: Original strand, 19414268 - 19414377
Alignment:
Q  51 taagactttaccctactcaatcacaactgactgagatttc-tatatgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaacttt 149  Q
    ||||||||||| || ||||||||||||||||||||| ||| ||  ||||||||||||||||||| |||||||||||||| ||||||| || ||| |||||    
T  19414268 taagactttacactgctcaatcacaactgactgagacttcctaggtgctcaaggtttcaccaagagacttatatgctcaggcacgcaagcaagagacttt 19414367  T
Q  150 gtaaaatgtt 159  Q
     |||||||||    
T  19414368 ctaaaatgtt 19414377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 51 - 226
Target Start/End: Original strand, 20052964 - 20053140
Alignment:
Q  51 taagactttaccctactcaatcacaactgactgaga-tttctatatgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaacttt 149  Q
    ||||||||||||   ||||||||||||| ||||| | ||||||  ||||||||||||||| | | |||||||||||||||||||| | || | | |||||    
T  20052964 taagactttaccactctcaatcacaactaactgacactttctaggtgctcaaggtttcactaggagacttatatgctcaagcacgtaagcaaaagacttt 20053063  T
Q  150 gtaaaatgtttgccccaactgcaaataagttaattggttcttacactctttttaactagtgagtgtaaactgaacaa 226  Q
     | |||| |||||||||||| |||| || |||| |  |||||||||| ||| |||||||| ||| ||||||||||||    
T  20053064 ctcaaatatttgccccaactacaaacaatttaacttattcttacactttttctaactagtaagtctaaactgaacaa 20053140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 66 - 471
Target Start/End: Original strand, 17918328 - 17918722
Alignment:
Q  66 ctcaatcacaactgactgagatttctatatgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgcccc 165  Q
    |||||| |||||| ||||||| | |||  ||||||||||||||||||| ||||||| |||||||||||||| | |||| ||||| ||||||||||  | |    
T  17918328 ctcaatgacaactaactgagactcctaggtgctcaaggtttcaccaagagacttatctgctcaagcacgcaggagagagactttttaaaatgttt-acac 17918426  T
Q  166 aactgcaaataagttaattggttcttacactctttttaacta-gtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaa 264  Q
    ||||||||| ||||||||| ||||||||| |   |||||| | |  ||||||||||||||              |||  || |||||||| |||||| ||    
T  17918427 aactgcaaa-aagttaatttgttcttacattagatttaacaatggtagtgtaaactgaac-------------tactctttcggatttctgagatatgaa 17918512  T
Q  265 cttgaaa-at-aaatcccaactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcag 362  Q
    ||| ||| || |||||  || | |||| | ||||| ||||||||||| |  ||||| ||||||||| |||||||||||||||| |||||||| ||||||     
T  17918513 cttcaaagataaaatcttaagtgttttgcgctattagatttgatagagtaatggcatagaaaaataacagagtcttgttacttcttcttcagatcttcaa 17918612  T
Q  363 ctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaat-agagtcgttgtgaagctttgatcaccaacattgtcccttttcctg 461  Q
    |||||| ||| |||| | |||||| |||  ||  |||||| |||||| |||||| | |||||||| ||| |||  ||||  ||| | | |||||| ||||    
T  17918613 ctccttatatgggcagtaatttgagagatatttaagaagagtgtcagcgcaaataaaagtcgttgagaatcttcaatcaagaacgtcggccctttacctg 17918712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 95 - 586
Target Start/End: Complemental strand, 19143252 - 19142763
Alignment:
Q  95 tgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttaca 194  Q
    |||||||||||||| |||| ||||||| | |||||||||||| |||||| ||||| |||| ||||| |   ||||| ||| ||||||||| |||||||||    
T  19143252 tgctcaaggtttcagcaagagacttatctactcaagcacgcaggcgagagactttctaaa-tgtttac---aactgtaaacaagttaatttgttcttaca 19143157  T
Q  195 ctctttttaactagtg-agtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaat--aaatcccaactatttttc 291  Q
    ||   |||||| |  | ||| |||| ||||||||| ||| |||||  |    ||||||||||||||||||||||||| |   |||||| || | ||||      
T  19143156 ctggatttaacaatggtagtataaattgaacaaatgaacagactctgt----aggatttctaagatataaacttgaataagaaaatcctaagtgttttgt 19143061  T
Q  292 tctatttgatttga-tagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgataga 390  Q
      |||||||||||| |||| |  |||||  | ||||||    |||||||  |||| |  |||||||||| |||||||| |||||||| | |||||| |||    
T  19143060 ggtatttgatttgactagagtagtggcaacgtaaaatagtttagtcttgc-acttctaattcaggtctttagctccttatataggcagtcatttgagaga 19142962  T
Q  391 cgttggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatcaccaacattgtcccttttcctgatatggataaatccactagaaagtacttt 490  Q
    |||||||||| | ||  || |||||||||||| ||| |||||||  ||||  ||  |  || |||| |||||||||||||| |||| |   |||| ||||    
T  19142961 cgttggagaaaagtgcaagcgcaaatagagtcattgagaagcttcaatcaagaatgtcttctctttgcctgatatggataattccattgagaagtccttt 19142862  T
Q  491 gaattttttatgttg-aaggagaattatctgtttc-ttttc-tcgttcctaatgtcctttgtatggttgtacacgtaaacagaagaagacaaaagaact 586  Q
    ||||||  | | ||| ||| ||||||||||||||| ||||| | |||| | | ||||||||| || ||| ||||||| |||||||||||||||||||||    
T  19142861 gaatttcctttattgaaagaagaattatctgtttcattttctttgttcttgaggtcctttgtctgtttgcacacgtagacagaagaagacaaaagaact 19142763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 95 - 586
Target Start/End: Complemental strand, 20742651 - 20742162
Alignment:
Q  95 tgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttaca 194  Q
    |||||||||||||| |||| ||||||| | |||||||||||| |||||| ||||| |||| ||||| |   ||||| ||| ||||||||| |||||||||    
T  20742651 tgctcaaggtttcagcaagagacttatctactcaagcacgcaggcgagagactttctaaa-tgtttac---aactgtaaacaagttaatttgttcttaca 20742556  T
Q  195 ctctttttaactagtg-agtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaat--aaatcccaactatttttc 291  Q
    ||   |||||| |  | ||| |||| ||||||||| ||| |||||  |    ||||||||||||||||||||||||| |   |||||| || | ||||      
T  20742555 ctggatttaacaatggtagtataaattgaacaaatgaacagactctgt----aggatttctaagatataaacttgaataagaaaatcctaagtgttttgt 20742460  T
Q  292 tctatttgatttga-tagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgataga 390  Q
      |||||||||||| |||| |  |||||  | ||||||    |||||||  |||| |  |||||||||| |||||||| |||||||| | |||||| |||    
T  20742459 ggtatttgatttgactagagtagtggcaacgtaaaatagtttagtcttgc-acttctaattcaggtctttagctccttatataggcagtcatttgagaga 20742361  T
Q  391 cgttggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatcaccaacattgtcccttttcctgatatggataaatccactagaaagtacttt 490  Q
    |||||||||| | ||  || |||||||||||| ||| |||||||  ||||  ||  |  || |||| |||||||||||||| |||| |   |||| ||||    
T  20742360 cgttggagaaaagtgcaagcgcaaatagagtcattgagaagcttcaatcaagaatgtcttctctttgcctgatatggataattccattgagaagtccttt 20742261  T
Q  491 gaattttttatgttg-aaggagaattatctgtttc-ttttc-tcgttcctaatgtcctttgtatggttgtacacgtaaacagaagaagacaaaagaact 586  Q
    ||||||  | | ||| ||| ||||||||||||||| ||||| | |||| | | ||||||||| || ||| ||||||| |||||||||||||||||||||    
T  20742260 gaatttcctttattgaaagaagaattatctgtttcattttctttgttcttgaggtcctttgtctgtttgcacacgtagacagaagaagacaaaagaact 20742162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 585 - 669
Target Start/End: Original strand, 17915726 - 17915810
Alignment:
Q  585 ctcacataataagacaaaagcttaagtggattctaggtcccttagattcaagtagcctgtcagattatgtgtctaatgtccttca 669  Q
    |||||| ||||||||||||||||| ||||||||| ||||||| |||| ||||||||  |||||||||||||||| ||||| ||||    
T  17915726 ctcacagaataagacaaaagcttacgtggattctgggtccctaagatccaagtagctagtcagattatgtgtctgatgtctttca 17915810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 326 - 408
Target Start/End: Complemental strand, 17891613 - 17891532
Alignment:
Q  326 atatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtca 408  Q
    ||||||||||||||||  || ||||||| ||||||| |||||| |||| |||| ||||||| ||||||||||||||| |||||    
T  17891613 atatcagagtcttgttg-ttgttcttcaagtcttcaactccttatataagcaaggatttgagagacgttggagaagagtgtca 17891532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 323 - 408
Target Start/End: Complemental strand, 1777332 - 1777248
Alignment:
Q  323 aaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtca 408  Q
    |||||| ||||||||||||  || |||||||| ||||||||||||| |||||| |  ||||||| ||||||||||||||| |||||    
T  1777332 aaaatagcagagtcttgttgatt-ttcttcagatcttcagctccttatataggtagggatttgagagacgttggagaagagtgtca 1777248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 583 - 671
Target Start/End: Original strand, 20053370 - 20053458
Alignment:
Q  583 aactcacataataagacaaaagcttaagtggattctaggtcccttagattcaagtagcctgtcagattatgtgtctaatgtccttcaca 671  Q
    |||||||| ||||| | || |||||| ||||||| | |||||||||||| ||||||||| |||| ||| ||||| | ||||||||||||    
T  20053370 aactcacaaaataataaaatagcttatgtggattatgggtcccttagatccaagtagccagtcaaattttgtgtttgatgtccttcaca 20053458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 585 - 638
Target Start/End: Original strand, 2278310 - 2278363
Alignment:
Q  585 ctcacataataagacaaaagcttaagtggattctaggtcccttagattcaagta 638  Q
    |||||| ||||||||||||||||| ||||||||| |||||||| ||| ||||||    
T  2278310 ctcacaaaataagacaaaagcttatgtggattctgggtcccttggatccaagta 2278363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 402
Target Start/End: Original strand, 19142099 - 19142178
Alignment:
Q  322 aaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaaga 402  Q
    ||||||| ||||||||||||| |||||||||| ||||||| ||| || ||| | ||| ||| ||| |||||||||||||||    
T  19142099 aaaaatagcagagtcttgtta-ttattcttcaagtcttcaactcattatattgacaaggatatgagagacgttggagaaga 19142178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 402
Target Start/End: Original strand, 20741498 - 20741577
Alignment:
Q  322 aaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaaga 402  Q
    ||||||| ||||||||||||| |||||||||| ||||||| ||| || ||| | ||| ||| ||| |||||||||||||||    
T  20741498 aaaaatagcagagtcttgtta-ttattcttcaagtcttcaactcattatattgacaaggatatgagagacgttggagaaga 20741577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 402
Target Start/End: Complemental strand, 27707559 - 27707504
Alignment:
Q  347 ttcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaaga 402  Q
    ||||||| |||||||||||||| ||| ||||| ||||||| || ||||||||||||    
T  27707559 ttcttcaagtcttcagctccttatatgggcaaggatttgagagtcgttggagaaga 27707504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 530 - 586
Target Start/End: Original strand, 20053287 - 20053343
Alignment:
Q  530 tcgttcctaatgtcctttgtatggttgtacacgtaaacagaagaagacaaaagaact 586  Q
    ||||||||| |||||||||| |||||| ||||||  |  ||||||||||||||||||    
T  20053287 tcgttcctagtgtcctttgtctggttgaacacgtttatggaagaagacaaaagaact 20053343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 331 - 423
Target Start/End: Original strand, 32957446 - 32957537
Alignment:
Q  331 agagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcg 423  Q
    |||||||||||| || ||||||| |||||| ||| ||| ||||||||| ||  | | ||||||||||||||| |||||| |||  ||||||||    
T  32957446 agagtcttgtta-ttgttcttcaagtcttctgcttcttatataggcaaggaaataagagacgttggagaagagtgtcagcgcatttagagtcg 32957537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 144; Significance: 2e-75; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 13 - 471
Target Start/End: Original strand, 78892 - 79333
Alignment:
Q  13 caagatacttcacttgcttaagaacaattgcttaattataagactttaccctactcaatcacaactgactgagatttc-tatatgctcaaggtttcacca 111  Q
    ||||| ||||| ||||||||||||||| |||||||      ||||||||||| ||||||||||||||||||||| ||| ||   ||||||||||||||||    
T  78892 caagagacttcccttgcttaagaacaactgcttaa------gactttacccttctcaatcacaactgactgagacttcctaggggctcaaggtttcacca 78985  T
Q  112 agggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttacactctttttaactagtga 211  Q
    || |||||||||||||||||||||| || ||| ||||| |||| ||||| |||| |||||||| | |||||||   ||||||||||||| ||| ||||||    
T  78986 agagacttatatgctcaagcacgcaggcaagagactttctaaagtgtttacccctactgcaaacacgttaattttgtcttacactctttctaa-tagtga 79084  T
Q  212 gtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaataaatcccaactatttttctctatttgatttgatagaat 311  Q
    ||||||||||||||||| |||  |||||   || || ||||||||||||||||||| ||||| ||||| || | |||| | ||||||||||||| ||| |    
T  79085 gtgtaaactgaacaaatcaacaaactca---ctcagaatttctaagatataaacttaaaaat-aatcctaagtgttttgcgctatttgatttgacagatt 79180  T
Q  312 tttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtg 411  Q
    |||||||||||||||||  ||| ||||||| ||  ||||||||||||||| ||||||| ||||||| |||||||| ||| |||| |||||      |||     
T  79181 tttggcacagaaaaata-gagaatcttgttgctacttcttcaggtcttcatctcctttcataggcactgatttgaaagatgttgaagaag------agta 79273  T
Q  412 caaatagagtcgttgtgaagctttgatcaccaacattgtcccttttcctgatatggataa 471  Q
    |||||| |||||||| || ||||  ||||| ||| ||  |||||||||||||||||||||    
T  79274 caaataaagtcgttgagaggcttcaatcacgaactttagcccttttcctgatatggataa 79333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 588 - 628
Target Start/End: Original strand, 79471 - 79511
Alignment:
Q  588 acataataagacaaaagcttaagtggattctaggtccctta 628  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  79471 acataataagagaaaagcttacgtggattctaggtccctta 79511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 130; Significance: 5e-67; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 51 - 354
Target Start/End: Original strand, 20396532 - 20396836
Alignment:
Q  51 taagactttaccctactcaatcacaactgactgagatttc-tatatgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaacttt 149  Q
    |||| ||||||||| |||||||| |||||| ||||| ||| ||  ||||||||  |||  |||| ||||||| ||||||||||| || |||||| |||||    
T  20396532 taagtctttaccctgctcaatcaaaactgattgagacttcctagttgctcaagaattcgtcaagagacttatctgctcaagcactcaggcgagagacttt 20396631  T
Q  150 gtaaaatgtttgccccaactgcaaataagttaattggttcttacactctttttaactagtgagtgtaaactgaacaaataaacggactcacttcttagga 249  Q
     |||||| ||||||||||||| ||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||  ||||||| |||||||    
T  20396632 ctaaaatctttgccccaactgaaaagaagttaatttgttcttacactctttctaactagtgagtgtaaactgaacaaatgaacaaactcactccttagga 20396731  T
Q  250 tttctaagatataaacttgaaaataaatcccaactattttt-ctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttatt 348  Q
    ||||||||||||||| |||||||| ||||| || | ||||| | || |||||||||| |||||||||||| ||||||||| |||||| ||||| ||| ||    
T  20396732 tttctaagatataaaattgaaaat-aatcctaagtgtttttgcgctctttgatttgacagaattttggcatagaaaaatagcagagttttgttgcttctt 20396830  T
Q  349 cttcag 354  Q
    ||||||    
T  20396831 cttcag 20396836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 94 - 586
Target Start/End: Original strand, 19731112 - 19731608
Alignment:
Q  94 atgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttac 193  Q
    ||||||||| |||||||||| || ||||||||||||||||||| || ||| ||||| |||||||||| ||||||||||||| ||||||||| ||||||||    
T  19731112 atgctcaagttttcaccaagagagttatatgctcaagcacgcaggcaagatactttctaaaatgttt-ccccaactgcaaacaagttaatttgttcttac 19731210  T
Q  194 actctttttaactagtga--gtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaataaatcccaactatttttc 291  Q
    ||| | |||||| | |||  ||||||| ||||||||| |||  | ||||| ||||||| || |||||||||||| |||||||| |||| || | |||| |    
T  19731211 actatatttaacaa-tgattgtgtaaattgaacaaatgaacatattcactccttaggagttttaagatataaacctgaaaatatatcctaagtgttttgc 19731309  T
Q  292 tctatttgatttgatagaattttggcacag-aaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgataga 390  Q
      ||||  |||||| ||| || |||||||  ||||||| |||||||||| |  || ||| || ||||||||||||| |||||||||| |||||||| |||    
T  19731310 gatattacatttgacagagttatggcacaataaaaatagcagagtcttgatgtttcttcctcgggtcttcagctccatttataggcagtgatttgagaga 19731409  T
Q  391 cgttggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatcaccaacattgtcccttttcctgatatggataaatccactagaaagtacttt 490  Q
    ||||| |||||| |||||   |||||| | || ||| |||||||||||||  | | ||| || |||||||||||| ||||| |||  |  ||| | ||||    
T  19731410 cgttgtagaagagtgtcatcacaaatataatcattgagaagctttgatcaagatcgttggcctttttcctgatatagataattcctttgaaaatttcttt 19731509  T
Q  491 gaattttttatgttg-aaggagaattatctgtt-tcttttc-tcgttcctaatgtcctttgtatggttgtacacgtaaacagaagaagacaaaagaact 586  Q
    ||||||  | ||  | ||| |||||||| |||| | || || | |||| | ||||||||||| |||||| ||||||| |||||||||||||||| ||||    
T  19731510 gaatttcctttgcggaaagaagaattatatgttgtattctctttgttcttgatgtcctttgtctggttgcacacgtagacagaagaagacaaaataact 19731608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 97 - 471
Target Start/End: Original strand, 17208645 - 17209015
Alignment:
Q  97 ctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttacact 196  Q
    ||||||||||||||||| ||||||| ||||||||||| ||  ||||| ||||| |||| ||||| | | ||||| ||| || |||||| |||||||||||    
T  17208645 ctcaaggtttcaccaagagacttatctgctcaagcacacagacgagagactttataaa-tgtttacac-aactgtaaacaatttaatttgttcttacact 17208742  T
Q  197 ctttttaactagtg-agtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaa-ataaa-tcccaactatttttctc 293  Q
       |||||| |  | | |||||| |||| || | ||| |||||    ||||||||||||||||||||||| ||||| ||||| ||| || | |||| | |    
T  17208743 ggatttaacaatggtaatgtaaattgaataa-tgaacagactc----cttaggatttctaagatataaacctgaaagataaaatcctaagtgttttgcgc 17208837  T
Q  294 tatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgt 393  Q
    |||||||||||| ||| |  ||  ||||||||||| || |||||||||     |||||||||||||||||||||| |||||||| |||  | | ||||||    
T  17208838 tatttgatttgacagagtaatgaaacagaaaaatagcaaagtcttgttgtcacttcttcaggtcttcagctccttatataggcagtgaaataagagacgt 17208937  T
Q  394 tggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatcaccaacattgtcccttttcctgatatggataa 471  Q
    ||||||||| ||||||  |||||||| |||||| |||||||  ||||  ||| ||| |||||| |||||||| |||||    
T  17208938 tggagaagagtgtcagcacaaatagaatcgttgagaagcttcaatcaagaacgttggccctttgcctgatatagataa 17209015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 98 - 449
Target Start/End: Complemental strand, 21689278 - 21688933
Alignment:
Q  98 tcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttacactc 197  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||| | ||| |||| | ||||||||||||||||| |  |||| |  ||||||||||     
T  21689278 tcaaggtttcaccaagagacttatatgctcaagcatgcaggcgagaga-tttttaaagtttttgccccaactgcaaacacattaactttttcttacactt 21689180  T
Q  198 tttttaactagtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaataaatcccaactattttt-ctctat 296  Q
    ||| ||||  || |||||||||||||||||| |||  | ||    | ||||||||| ||||| |  ||||| |||||||||| || | ||||| | ||||    
T  21689179 tttctaacctgtaagtgtaaactgaacaaatgaacataatc----cctaggatttcaaagat-ttgacttg-aaataaatcctaagtgtttttgcgctat 21689086  T
Q  297 ttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttgg 396  Q
    |  |||||| ||| |  ||||||||   |||| || ||||||||||||| ||||||||||||| ||| ||||||||||| | |||||| | ||| | |||    
T  21689085 taaatttgacagagtaatggcacagttgaataacatagtcttgttactttttcttcaggtctttagcaccttttataggaagtgatttaagagatgatgg 21688986  T
Q  397 agaagattgtcagtgcaaatagagtcgttgtgaagctttgatcaccaacattg 449  Q
    ||| |  || ||| ||||||||||| |||| |||||||  ||||| |||||||    
T  21688985 agatgggtgccagcgcaaatagagtagttgagaagcttcaatcacgaacattg 21688933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 109 - 279
Target Start/End: Original strand, 34659631 - 34659797
Alignment:
Q  109 ccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttacactctttttaactag 208  Q
    ||||| ||||||| |||||||||||||| |||||| ||||  |||||||||| | | ||| | ||| |||| |||| |||||||||||    ||||| |     
T  34659631 ccaagagacttatctgctcaagcacgcaggcgagagacttactaaaatgtttacac-aacagtaaacaagtaaatttgttcttacacttgaattaacaat 34659729  T
Q  209 tg-agtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaataaatcc 279  Q
     | |||||||||||||||||| ||| |||||    ||||||||||||||||||||||| |||||||||||||    
T  34659730 ggtagtgtaaactgaacaaatgaacagactc----cttaggatttctaagatataaacatgaaaataaatcc 34659797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 95 - 225
Target Start/End: Complemental strand, 28952503 - 28952373
Alignment:
Q  95 tgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttaca 194  Q
    ||||||||  ||| ||||| ||||||||||||||||||| || | |||| ||||| |||| |||||||  |||| ||||| | ||||| | ||||||| |    
T  28952503 tgctcaagacttcgccaagagacttatatgctcaagcacacaggtgagagactttctaaagtgtttgcttcaacagcaaacacgttaacttgttcttata 28952404  T
Q  195 ctctttttaactagtgagtgtaaactgaaca 225  Q
     | |||||||| ||| |||||||||||||||    
T  28952403 gtttttttaaccagtaagtgtaaactgaaca 28952373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 136
Target Start/End: Complemental strand, 27165936 - 27165851
Alignment:
Q  52 aagactttaccctactcaatcacaactgactgaga-tttctatatgctcaaggtttcaccaagggacttatatgctcaagcacgca 136  Q
    |||| |||||||||||||||||||||||||||||| || |||  ||| |||| |||||| ||| ||||||||| ||||||||||||    
T  27165936 aagattttaccctactcaatcacaactgactgagacttcctaggtgcccaagatttcactaagagacttatatactcaagcacgca 27165851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 347 - 471
Target Start/End: Complemental strand, 240095 - 239973
Alignment:
Q  347 ttcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatcaccaaca 446  Q
    ||||||||| |||||||||||| | ||||||   | |||| ||||||||||||||| |||| |  |||||||  |||||| |||||||  ||||  |||     
T  240095 ttcttcaggccttcagctccttatctaggcagctacttgagagacgttggagaagagtgtccgcacaaatag--tcgttgagaagcttcaatcaagaacg 239998  T
Q  447 ttgtcccttttcctgatatggataa 471  Q
    |||||||||| ||||||||||||||    
T  239997 ttgtccctttgcctgatatggataa 239973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 10815038 - 10814962
Alignment:
Q  331 agagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtca 408  Q
    |||||| ||||| |||||||||| || ||||||||||| |||| |||| ||||||| ||| ||||||||||| |||||    
T  10815038 agagtcatgtta-ttattcttcaagtattcagctccttatatatgcaaggatttgagagatgttggagaagaatgtca 10814962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 530 - 579
Target Start/End: Original strand, 14201361 - 14201410
Alignment:
Q  530 tcgttcctaatgtcctttgtatggttgtacacgtaaacagaagaagacaa 579  Q
    |||||||| ||||||||||| |||| ||||||||| ||||||||||||||    
T  14201361 tcgttcctgatgtcctttgtctggtagtacacgtagacagaagaagacaa 14201410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 325 - 409
Target Start/End: Original strand, 4312221 - 4312304
Alignment:
Q  325 aatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcag 409  Q
    ||||||| ||||||||| ||  ||||||| ||||||| ||| || ||||||||| ||||||| ||||||||||| ||| ||||||    
T  4312221 aatatcatagtcttgttgctg-ttcttcaagtcttcaactctttatataggcaaggatttgagagacgttggagtagaatgtcag 4312304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 240371 - 240304
Alignment:
Q  66 ctcaatcacaactgactgagatttc-tatatgctcaaggtttcaccaagggacttatatgctcaagca 132  Q
    ||||| ||||||||| ||||| ||| || |||||||||||||||||||| ||||||| | ||||||||    
T  240371 ctcaaccacaactgattgagacttcctaaatgctcaaggtttcaccaagagacttatctactcaagca 240304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 397
Target Start/End: Complemental strand, 18615492 - 18615418
Alignment:
Q  322 aaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttgga 397  Q
    ||||||| ||||||||| ||| |  |||||||||||||||||||||| ||||||||  ||||||| |||| |||||    
T  18615492 aaaaatagcagagtcttattaatc-ttcttcaggtcttcagctccttatataggcagggatttgagagacattgga 18615418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 408
Target Start/End: Complemental strand, 4098004 - 4097943
Alignment:
Q  347 ttcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtca 408  Q
    ||||||| ||||| |||||||| |||||||||  ||| || ||||||||||||||| |||||    
T  4098004 ttcttcaagtcttaagctccttatataggcaagaattcgagagacgttggagaagagtgtca 4097943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527 (Bit Score: 108; Significance: 7e-54; HSPs: 2)
Name: scaffold0527
Description:

Target: scaffold0527; HSP #1
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 104 - 471
Target Start/End: Complemental strand, 935 - 573
Alignment:
Q  104 tttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttacactcttttta 203  Q
    |||||||||| ||||||||| ||||| |||||| | |||||||||| |||||||||| ||| ||||||||| ||||||||| ||||||||||| ||| ||    
T  935 tttcaccaagagacttatatactcaatcacgcaagtgagaaactttctaaaatgttttcccgaactgcaaacaagttaatttgttcttacactttttcta 836  T
Q  204 actagtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaataaatcccaactat-ttttctctatttgatt 302  Q
    |||||| |||| ||||| ||||||| ||| |||||    | ||||||||||||||| |||||||| |||| ||||| || | | ||| | |||||  |||    
T  835 actagtaagtgaaaactaaacaaatgaacagactc----cctaggatttctaagat-taaacttg-aaatgaatcctaagtttgtttgcactattaaatt 742  T
Q  303 tgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaaga 402  Q
    ||| ||| |  ||||| ||   |||| |||||||||||| ||| || |||| ||||||||||||||||||||| | |||||||| || ||||||||||||    
T  741 tgacagagtaatggcaaagtttaataacagagtcttgttgcttctttttcaagtcttcagctccttttataggtagtgatttgaaagtcgttggagaaga 642  T
Q  403 ttgtcagtgcaaatagagtcgttgtgaagctttgatcaccaacattgtcccttttcctgatatggataa 471  Q
     | ||||  ||||||||||||||  |||||||  ||||| ||| ||| |||||| ||||||||||||||    
T  641 gtttcagcccaaatagagtcgttaagaagcttcaatcacaaacgttggccctttgcctgatatggataa 573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527; HSP #2
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 104 - 471
Target Start/End: Complemental strand, 8998 - 8636
Alignment:
Q  104 tttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttacactcttttta 203  Q
    |||||||||| ||||||||| ||||| |||||| | |||||||||| |||||||||| ||| ||||||||| ||||||||| ||||||||||| ||| ||    
T  8998 tttcaccaagagacttatatactcaatcacgcaagtgagaaactttctaaaatgttttcccgaactgcaaacaagttaatttgttcttacactttttcta 8899  T
Q  204 actagtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaataaatcccaactat-ttttctctatttgatt 302  Q
    |||||| |||| ||||| ||||||| ||| |||||    | ||||||||||||||| |||||||| |||| ||||| || | | ||| | |||||  |||    
T  8898 actagtaagtgaaaactaaacaaatgaacagactc----cctaggatttctaagat-taaacttg-aaatgaatcctaagtttgtttgcactattaaatt 8805  T
Q  303 tgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaaga 402  Q
    ||| ||| |  ||||| ||   |||| |||||||||||| ||| || |||| ||||||||||||||||||||| | |||||||| || ||||||||||||    
T  8804 tgacagagtaatggcaaagtttaataacagagtcttgttgcttctttttcaagtcttcagctccttttataggtagtgatttgaaagtcgttggagaaga 8705  T
Q  403 ttgtcagtgcaaatagagtcgttgtgaagctttgatcaccaacattgtcccttttcctgatatggataa 471  Q
     | ||||  ||||||||||||||  |||||||  ||||| ||| ||| |||||| ||||||||||||||    
T  8704 gtttcagcccaaatagagtcgttaagaagcttcaatcacaaacgttggccctttgcctgatatggataa 8636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 3e-47; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 213 - 582
Target Start/End: Original strand, 21318192 - 21318560
Alignment:
Q  213 tgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaa-cttgaaaataaatcccaactatttttctctatttgatttgatagaat 311  Q
    |||||||||||||||| ||   ||||||| |||||||||| ||||||||||| ||||||||  ||||| || | |||| | ||||||||| ||| ||| |    
T  21318192 tgtaaactgaacaaatgaaaaaactcactccttaggatttttaagatataaaacttgaaaaataatcctaagtgttttgcgctatttgatatgacagagt 21318291  T
Q  312 tttggcacagaaaaatatcagagtcttgtt-acttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagt 410  Q
    |||||||||||||||||   |||| ||  | |||||||||||| || |||||||||||||||| ||| |||||||| |||| |||||||||| |||| |     
T  21318292 tttggcacagaaaaatagtggagtgtttatcacttattcttcaagttttcagctccttttatatgcagtgatttgagagactttggagaagagtgtcggc 21318391  T
Q  411 gcaaatagagtcgttgtgaagctttgatcaccaacattgtcccttttcctgatatggataaatccactagaaagtactttgaattttttatgttgaagga 510  Q
    ||||||| |||||||| |||||||||||||  ||||||| |||||| ||||||||| |||| ||   | |||||| ||||||||||  | || ||||       
T  21318392 gcaaatatagtcgttgagaagctttgatcaagaacattggccctttgcctgatatgtataattctgttggaaagtcctttgaatttcctttgctgaa--c 21318489  T
Q  511 gaattatctgtttcttttctcgttcctaatgtcctttgtatggttgtacacgtaaacagaagaagacaaaag 582  Q
     || ||| |||| || |  |||||||||||| | ||||| |||||| ||||||| |||||||||||||||||    
T  21318490 aaagtatttgttgctctcttcgttcctaatg-cttttgtctggttgcacacgtagacagaagaagacaaaag 21318560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 97 - 496
Target Start/End: Complemental strand, 13178347 - 13177952
Alignment:
Q  97 ctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttacact 196  Q
    |||||||||| |||||| |||||||||||||||||||||| |||||| ||||| | |||||||||| | ||||||||| |||||| ||  ||||||||||    
T  13178347 ctcaaggttttaccaagagacttatatgctcaagcacgcaggcgagagactttcttaaatgtttgcac-aactgcaaacaagttacttttttcttacact 13178249  T
Q  197 ctttttaactagtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaat--aaatcccaactatttttctct 294  Q
       |||||| | ||   || |||||||||||| ||| |||||    |||||||||||||||||||||||||||||    |||| | || | |||| | ||    
T  13178248 agatttaacaa-tggtagtgaactgaacaaatgaacagactc----cttaggatttctaagatataaacttgaaagctaaaattctaagtgttttgcgct 13178154  T
Q  295 atttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgtt 394  Q
    |||||||||||  ||  ||||||| | ||||||| || |||||||||| || | ||||||||||||| ||||||||||||||| |||||||| |||| ||    
T  13178153 atttgatttgacggagatttggcatataaaaataacatagtcttgttatttctgcttcaggtcttcaactccttttataggcagtgatttgagagacatt 13178054  T
Q  395 ggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatcaccaacattgtcccttttcctgatatggataaatccactagaaagtactttgaat 494  Q
    ||| |||| |  || |||||||||||||||||   | |||||||||  ||  ||| | |||| |||||||||||||| |||  | |||| | ||||||||    
T  13178053 ggaaaagagttgcaatgcaaatagagtcgttggataactttgatcaagaaagttgactctttgcctgatatggataattccgttggaaaatcctttgaat 13177954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 51 - 402
Target Start/End: Complemental strand, 11830039 - 11829695
Alignment:
Q  51 taagactttaccctactcaatcacaactgactgagatttctatatgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttg 150  Q
    ||||||||| || ||||||||||||||| ||||||| | |||  || |||||||||||||||| ||||||| | ||||||||| || |||||| |||||     
T  11830039 taagactttcccttactcaatcacaactaactgagactcctaggtgttcaaggtttcaccaagagacttatctactcaagcacacaggcgagagactttc 11829940  T
Q  151 taaaatgtttgccccaactgcaaataagttaattggttcttacactctttttaactagtg-agtgtaaactgaacaaataaacggactcacttcttagga 249  Q
    ||||||||||  | |||| | ||| ||||||||| ||||||||||||  |||||| | || | |||||||| ||||||| ||| |||||    |||||||    
T  11829939 taaaatgttt-acacaacggtaaacaagttaatttgttcttacactcgatttaacaattgcaatgtaaactaaacaaatgaacagactc----cttagga 11829845  T
Q  250 tttctaagatataaacttgaa-aataaatcccaactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgtta---ctt 345  Q
    |||||||||||||||||||||  ||||| | ||| |  ||| | |||||| ||||||||      |||||||| |||||| |||||||||||||   |||    
T  11829844 tttctaagatataaacttgaatgataaa-ctcaagt-gtttgcgctattttatttgata-----atggcacagtaaaataacagagtcttgttacttctt 11829752  T
Q  346 attcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaaga 402  Q
     ||||||||||||||| || ||| ||||||||||||  ||| |||||||||||||||    
T  11829751 cttcttcaggtcttcaactacttatataggcaatgaaatgagagacgttggagaaga 11829695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 95 - 434
Target Start/End: Complemental strand, 8711668 - 8711333
Alignment:
Q  95 tgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttaca 194  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||| ||||||||||||||| ||  | |||||||  ||||||||    
T  8711668 tgctcaatgtttcaccaagagacttatatgctcaagcacgcatacgagagattttttaaagtgtttgccccaactggaataacgttaattttttcttaca 8711569  T
Q  195 ctctttttaactagtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaataaatcccaact-atttttctc 293  Q
     | ||| || ||||| || ||||||||||||||| |||  ||||    | |||||||||||||| |||||||||||||| ||||| || | ||||| | |    
T  8711568 ttttttctagctagtaagcgtaaactgaacaaattaacaaactc----cctaggatttctaaga-ataaacttgaaaattaatcctaattgattttgcgc 8711474  T
Q  294 tatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgt 393  Q
    ||||  |||||| | | |  |||||||    |||| ||||||||| |||||| |||||| |||||| |||||||| || || || |||||||| ||| ||    
T  8711473 tattaaatttgacaaagtaatggcacaattgaatagcagagtcttattacttcttcttcgggtctttagctccttatacagacagtgatttgagagatgt 8711374  T
Q  394 tggagaagattgtcagtgcaaatagagtcgttgtgaagctt 434  Q
    | ||||||| |  ||  |||||||||||||||| |||||||    
T  8711373 tagagaagagtcccaacgcaaatagagtcgttgagaagctt 8711333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 95 - 434
Target Start/End: Complemental strand, 9063555 - 9063220
Alignment:
Q  95 tgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttaca 194  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||| ||||||||||||||| ||  | |||||||  ||||||||    
T  9063555 tgctcaatgtttcaccaagagacttatatgctcaagcacgcatacgagagattttttaaagtgtttgccccaactggaataacgttaattttttcttaca 9063456  T
Q  195 ctctttttaactagtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaataaatcccaact-atttttctc 293  Q
     | ||| || ||||| || ||||||||||||||| |||  ||||    | |||||||||||||| |||||||||||||| ||||| || | ||||| | |    
T  9063455 ttttttctagctagtaagcgtaaactgaacaaattaacaaactc----cctaggatttctaaga-ataaacttgaaaattaatcctaattgattttgcgc 9063361  T
Q  294 tatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgt 393  Q
    ||||  |||||| | | |  |||||||    |||| ||||||||| |||||| |||||| |||||| |||||||| || || || |||||||| ||| ||    
T  9063360 tattaaatttgacaaagtaatggcacaattgaatagcagagtcttattacttcttcttcgggtctttagctccttatacagacagtgatttgagagatgt 9063261  T
Q  394 tggagaagattgtcagtgcaaatagagtcgttgtgaagctt 434  Q
    | ||||||| |  ||  |||||||||||||||| |||||||    
T  9063260 tagagaagagtcccaacgcaaatagagtcgttgagaagctt 9063220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 217 - 587
Target Start/End: Complemental strand, 13341127 - 13340758
Alignment:
Q  217 aactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaat--aaatcccaactatttttctctatttgatttgatagaatttt 314  Q
    |||||||||||| ||| |||||    |||||||||||||||||||||||||||||    |||| | || | |||| | |||||||||||||  ||  |||    
T  13341127 aactgaacaaatgaacagactc----cttaggatttctaagatataaacttgaaagctaaaattctaagtgttttgcgctatttgatttgacggagattt 13341032  T
Q  315 ggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaa 414  Q
    |||| | ||||||| || |||||||||| || | ||||||||||||| ||||||||||| ||| |||||| | |||||||||| |||  |  || |||||    
T  13341031 ggcatataaaaataacatagtcttgttatttctgcttcaggtcttcaactccttttatatgcagtgatttaagagacgttggaaaag--ttccaatgcaa 13340934  T
Q  415 atagagtcgttgtgaagctttgatcaccaacattgtcccttttcctgatatggataaatccactagaaagtactttgaattttttatgttgaagga-gaa 513  Q
    ||||||||||||   | |||||||||  ||  ||| | |||| |||||||||||||| |||  | |||| |  |||||||||  | || |||| || |||    
T  13340933 atagagtcgttggataactttgatcaagaaagttgactctttgcctgatatggataattccgttggaaaatcttttgaatttcctttgctgaaagatgaa 13340834  T
Q  514 ttatctgtt-tcttttc-tcgttcctaatgtcctttgtatggttgtacacgtaaacagaagaagacaaaagaactc 587  Q
    |||  |||| | || || | |||| ||| ||||||||| | |||| ||||||| ||||||||||||||||||||||    
T  13340833 ttacgtgttgtattctctttgttcttaaggtcctttgtctagttgcacacgtagacagaagaagacaaaagaactc 13340758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 99 - 496
Target Start/End: Original strand, 9323233 - 9323627
Alignment:
Q  99 caaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttacactct 198  Q
    ||||||||||||||  |||||||||||||| ||||||| |||||| ||||| |||  ||||| | | || || ||| |||||||||  |||||||| |      
T  9323233 caaggtttcaccaaaagacttatatgctcatgcacgcaggcgagagactttctaat-tgtttacac-aattgtaaacaagttaatttattcttacattga 9323330  T
Q  199 ttttaactagtg-agtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaat--aaatcccaactatttttctcta 295  Q
     |||||| |  | |||||||| |||| |||| ||| |||||    ||||||||||||||||||| || || |||    |||||| |  | |||| | |||    
T  9323331 atttaacaatggtagtgtaaattgaaaaaatgaacagactc----cttaggatttctaagatatgaatttcaaagctaaaatcctatgtgttttgcgcta 9323426  T
Q  296 tttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttg 395  Q
    |||||||||| | | |  || ||||||||||||  | |||||| |||||| |||||||||| ||| ||||||| |||||| | |||  ||| |||| |||    
T  9323427 tttgatttgacaaagtaatgacacagaaaaatagaaaagtcttattacttcttcttcaggtattcggctccttatataggtagtgaaatgagagacattg 9323526  T
Q  396 gagaagattgtcagtgcaaatagagtcgttgtgaagctttgatcaccaacattgtcccttttcctgatatggataaatccactagaaagtactttgaatt 495  Q
    ||||||| || ||  |||||||||||||||| |||||||  ||||  ||||||| | |||| |||||||||||||| |||  |  |||||| ||||||||    
T  9323527 gagaagagtgccaacgcaaatagagtcgttgagaagcttcaatcaagaacattggcgctttgcctgatatggataattccgttgaaaagtattttgaatt 9323626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 115 - 238
Target Start/End: Original strand, 3646700 - 3646822
Alignment:
Q  115 gacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttacactctttttaactagtgagtg 214  Q
    ||||||||| |||||||||||| |||||| ||||| |||| |||||| || || |||||| | ||||||| ||||||||||| ||| |||| ||| ||||    
T  3646700 gacttatatactcaagcacgcaggcgagagactttctaaagtgtttgtcc-aattgcaaacacgttaatttgttcttacactttttctaaccagtaagtg 3646798  T
Q  215 taaactgaacaaataaacggactc 238  Q
    |||||||||||||| ||| |||||    
T  3646799 taaactgaacaaatgaacagactc 3646822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 347 - 471
Target Start/End: Complemental strand, 21528318 - 21528194
Alignment:
Q  347 ttcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatcaccaaca 446  Q
    |||||||||||| || |||||| |||||||| | |||||| ||| ||| ||||||| |||||| |||||||||||||||| ||| |||  ||||  |||     
T  21528318 ttcttcaggtctacaactccttgtataggcagtcatttgacagaggttcgagaagagtgtcagcgcaaatagagtcgttgagaatcttcaatcaagaacg 21528219  T
Q  447 ttgtcccttttcctgatatggataa 471  Q
    | | |||||| ||||||||||||||    
T  21528218 tcgaccctttgcctgatatggataa 21528194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 15538696 - 15538809
Alignment:
Q  11 tgcaagatacttcacttgcttaagaacaattgcttaattataagactttaccctactcaatcacaactgactgaga-tttctatatgctcaaggtttcac 109  Q
    ||||||| ||||| ||||||||||||||| |||||||      ||||||||||| ||||||||||||| ||||||| || |||  ||||||||| |||      
T  15538696 tgcaagagacttcccttgcttaagaacaactgcttaa------gactttaccctgctcaatcacaactaactgagacttcctacttgctcaaggcttcgt 15538789  T
Q  110 caagggacttatatgctcaa 129  Q
    |||| ||||| |||||||||    
T  15538790 caagagacttgtatgctcaa 15538809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 323 - 399
Target Start/End: Complemental strand, 17034710 - 17034635
Alignment:
Q  323 aaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggaga 399  Q
    |||||| || |||||||||| |||||||||| ||||| | |||||| ||||||||| ||||||| ||||||||||||    
T  17034710 aaaataacaaagtcttgtta-ttattcttcaagtcttaaactccttatataggcaaggatttgagagacgttggaga 17034635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 354 - 413
Target Start/End: Complemental strand, 16199262 - 16199203
Alignment:
Q  354 ggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgca 413  Q
    ||||||||||| ||| ||||||||  ||||| | |||||||||||||||||| |||||||    
T  16199262 ggtcttcagcttcttatataggcagggatttaagagacgttggagaagattggcagtgca 16199203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 344 - 399
Target Start/End: Original strand, 19905611 - 19905666
Alignment:
Q  344 ttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggaga 399  Q
    |||||||||||||||||| ||| || ||||||| | ||||||| ||||||||||||    
T  19905611 ttattcttcaggtcttcaactctttatataggctaggatttgagagacgttggaga 19905666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 622
Target Start/End: Original strand, 21318591 - 21318630
Alignment:
Q  583 aactcacataataagacaaaagcttaagtggattctaggt 622  Q
    |||||||| ||||||||||||||||| |||||||||||||    
T  21318591 aactcacagaataagacaaaagcttacgtggattctaggt 21318630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 322 - 408
Target Start/End: Complemental strand, 13291952 - 13291866
Alignment:
Q  322 aaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtca 408  Q
    |||||||  |||||||| ||  || ||||||| ||||||||||||||  | | |||| ||||||| ||||||||||||||| |||||    
T  13291952 aaaaatagaagagtcttattgtttgttcttcaagtcttcagctccttacacatgcaaggatttgagagacgttggagaagagtgtca 13291866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 397
Target Start/End: Complemental strand, 15331576 - 15331496
Alignment:
Q  316 gcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttgga 397  Q
    |||||| |||||| ||||||||||| | |  ||||||| || ||||||||||| |||||||| |||||||| |||| |||||    
T  15331576 gcacagtaaaatagcagagtcttgtcaatc-ttcttcaagtattcagctccttatataggcagtgatttgagagacattgga 15331496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 94; Significance: 2e-45; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 97 - 496
Target Start/End: Original strand, 128641 - 129036
Alignment:
Q  97 ctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttacact 196  Q
    |||||||||| |||||| |||||||||||||||||||||| |||||| ||||| | |||||||||| | ||||||||| |||||| ||  ||||||||||    
T  128641 ctcaaggttttaccaagagacttatatgctcaagcacgcaggcgagagactttcttaaatgtttgcac-aactgcaaacaagttacttttttcttacact 128739  T
Q  197 ctttttaactagtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaat--aaatcccaactatttttctct 294  Q
       |||||| | ||   || |||||||||||| ||| |||||    |||||||||||||||||||||||||||||    |||| | || | |||| | ||    
T  128740 agatttaacaa-tggtagtgaactgaacaaatgaacagactc----cttaggatttctaagatataaacttgaaagctaaaattctaagtgttttgcgct 128834  T
Q  295 atttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgtt 394  Q
    |||||||||||  ||  ||||||| | ||||||| || |||||||||| || | ||||||||||||| ||||||||||||||| |||||||| |||| ||    
T  128835 atttgatttgacggagatttggcatataaaaataacatagtcttgttatttctgcttcaggtcttcaactccttttataggcagtgatttgagagacatt 128934  T
Q  395 ggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatcaccaacattgtcccttttcctgatatggataaatccactagaaagtactttgaat 494  Q
    ||| |||| |  || |||||||||||||||||   | |||||||||  ||  ||| | |||| |||||||||||||| |||  | |||| | ||||||||    
T  128935 ggaaaagagttgcaatgcaaatagagtcgttggataactttgatcaagaaagttgactctttgcctgatatggataattccgttggaaaatcctttgaat 129034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 66 - 522
Target Start/End: Original strand, 26054 - 26506
Alignment:
Q  66 ctcaatcacaactgactgaga-tttctatatgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccc 164  Q
    ||||||||||||||||| ||| ||||||  |||||||  |||||||||| ||||||| ||||||||||| || |||||| | ||| |||| ||||| |      
T  26054 ctcaatcacaactgactaagactttctaagtgctcaatttttcaccaagagacttatctgctcaagcacacaagcgagagaatttctaaa-tgtttac-- 26150  T
Q  165 caactgcaaataagttaattggttcttacactctttttaactagtg-agtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataa 263  Q
     ||  | ||| || |||||| |||||||||||   |||||| |  | ||||||||||||||||||||||  ||||   | ||||||||||||||||||||    
T  26151 -aaaagtaaacaaattaatttgttcttacactggatttaacaatggcagtgtaaactgaacaaataaacaaactc---ttttaggatttctaagatataa 26246  T
Q  264 acttgaaaat--aaatcccaactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttca 361  Q
    |||||||     |||||| || | ||||   ||||||||||||| | | |  || ||||| |||||  ||||||||||||| || |||||||||||||||    
T  26247 acttgaatgctaaaatcctaagtgttttgggctatttgatttgacatagtaatgacacagtaaaattgcagagtcttgtta-ttcttcttcaggtcttca 26345  T
Q  362 gctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatcaccaacattgtcccttttcctg 461  Q
    ||||||| |||| ||| | |||||| || |||||||||||| ||  |||| |||||||||||||  |||||||  ||||  ||| ||| |||||| ||||    
T  26346 gctccttatatatgcagtcatttgagaggcgttggagaagagtgctagtgtaaatagagtcgttcagaagcttcaatcaagaacgttggccctttgcctg 26445  T
Q  462 atatggataaatccactagaaagtactttgaattttttatgttgaaggagaattatctgtt 522  Q
    |||||||||| || | |  | ||| ||||||||||  | |||||||| |||||||||||||    
T  26446 atatggataattctattgaatagtcctttgaatttcctttgttgaagtagaattatctgtt 26506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 9e-38; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 243 - 438
Target Start/End: Complemental strand, 22317041 - 22316846
Alignment:
Q  243 cttaggatttctaagatataaacttgaaaa-taaatcccaactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgtt 341  Q
    |||||||||||||||||||||||||||||| |||| || || ||||||   ||||||||||||| ||| | ||| |||||||||||| ||||||||| ||    
T  22317041 cttaggatttctaagatataaacttgaaaaataaaacctaagtattttgtgctatttgatttgacagagtattgacacagaaaaatagcagagtcttttt 22316942  T
Q  342 acttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctttgat 438  Q
    |||| ||||||| |||||||||||| |||||||||| |||||||| ||||||| ||||| | ||  || | ||||||||| |||| |||||||||||    
T  22316941 acttcttcttcatgtcttcagctcc-tttataggcagtgatttgagagacgttagagaaaagtgctagcgtaaatagagttgttgagaagctttgat 22316846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 95 - 279
Target Start/End: Complemental strand, 13570941 - 13570761
Alignment:
Q  95 tgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttaca 194  Q
    ||||||||| || |||||| ||||||||||| ||||||| || |||||| ||||| |||||| ||| ||||||||||||| ||||||||  |||||||||    
T  13570941 tgctcaaggatttaccaagagacttatatgcgcaagcacacaggcgagatactttctaaaatattttccccaactgcaaacaagttaatatgttcttaca 13570842  T
Q  195 ctctttttaac-tagtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgaaaataaatcc 279  Q
    || ||| ||||  ||| ||| |||||||||||||| ||| |    |||||||||| ||||||||||||| | ||||||||||||||    
T  13570841 ctatttctaacaaagttagtttaaactgaacaaatgaacag----acttcttagggtttctaagatatata-ttgaaaataaatcc 13570761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 51 - 194
Target Start/End: Complemental strand, 39981087 - 39980944
Alignment:
Q  51 taagactttaccctactcaatcacaactgactgagatttc-tatatgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaacttt 149  Q
    ||||||||| || | |||||||| |||||||||||| ||| ||  ||||||| |||||||||||  ||||||||||||||||||||| |||||| |||||    
T  39981087 taagactttcccttgctcaatcagaactgactgagacttcctaagtgctcaatgtttcaccaagatacttatatgctcaagcacgcaggcgagagacttt 39980988  T
Q  150 gtaaaatgtttgccccaactgcaaataagttaattggttcttaca 194  Q
     ||||||||||| | |||||||||| |||||||||  ||||||||    
T  39980987 ctaaaatgtttg-cacaactgcaaacaagttaatttattcttaca 39980944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 434
Target Start/End: Original strand, 8911412 - 8911598
Alignment:
Q  245 taggatttctaagatataaacttgaaaata--aatcccaactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgtta 342  Q
    ||||||||||||||||||||||| || |||  ||||| || ||||||   ||||||||||||||| | |  ||| |||| ||| || ||||||||||||     
T  8911412 taggatttctaagatataaacttcaatatagaaatcctaagtattttgtgctatttgatttgataaagtaatggaacagtaaattagcagagtcttgttg 8911511  T
Q  343 cttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctt 434  Q
     |  ||||| |||||||||| ||||| ||||||||    ||| | ||||||||||||||| ||| ||||||||||||||||||| |||||||    
T  8911512 atc-ttctttaggtcttcagatccttatataggca----tttaagagacgttggagaagagtgttagtgcaaatagagtcgttgagaagctt 8911598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 24955430 - 24955329
Alignment:
Q  95 tgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttaca 194  Q
    |||||||||||| |||||  ||| |||||||||||||||||| |  | | ||||| ||||||||||||||| ||| |||| ||||||||| |||||||||    
T  24955430 tgctcaaggttttaccaaaagacctatatgctcaagcacgcaggtaaaagactttctaaaatgtttgccccgactacaaacaagttaatttgttcttaca 24955331  T
Q  195 ct 196  Q
    ||    
T  24955330 ct 24955329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 383 - 586
Target Start/End: Complemental strand, 5843015 - 5842810
Alignment:
Q  383 ttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatcaccaacattgtcccttttcctgatatggataaatccactagaa 482  Q
    |||| ||||||||||||||| || ||||||||||||||||||||  ||| ||||||||  ||| ||  ||||||  ||| |||||||||||||| |  ||    
T  5843015 ttgagagacgttggagaagagtg-cagtgcaaatagagtcgttgataagttttgatcaagaacgttagccctttgactggtatggataaatccattgaaa 5842917  T
Q  483 agtactttgaattttttatgttgaaggaga-attatctgtttc-ttttc-tcgttcctaatgtcctttgtatggttgtacacgtaaacagaagaagacaa 579  Q
    |||  |||||||||  | || |||| || | |||||||||| | || || | |||| ||||||||||| | |||||| ||||||| ||| ||||||||||    
T  5842916 agtcttttgaatttcctttgctgaaagaaatattatctgttgcattctctttgttcttaatgtcctttatttggttgcacacgtagacataagaagacaa 5842817  T
Q  580 aagaact 586  Q
    |||||||    
T  5842816 aagaact 5842810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 350 - 435
Target Start/End: Original strand, 18445803 - 18445888
Alignment:
Q  350 ttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagcttt 435  Q
    ||||||||||||||||||| ||||||||  ||||||| ||||||||||||| | ||| || |||   |||||||||| ||||||||    
T  18445803 ttcaggtcttcagctccttatataggcagggatttgagagacgttggagaatagtgtaagcgcattaagagtcgttgagaagcttt 18445888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 4746497 - 4746429
Alignment:
Q  330 cagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggaga 399  Q
    ||||| |||||| ||| ||||||| ||||| |||||||| ||||||||| ||||||| ||||||||||||    
T  4746497 cagagacttgttgctt-ttcttcaagtcttaagctccttatataggcaaggatttgagagacgttggaga 4746429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 583 - 671
Target Start/End: Complemental strand, 5842783 - 5842694
Alignment:
Q  583 aactcacataataagacaaaagcttaagtggattctaggtcccttagattcaagta-gcctgtcagattatgtgtctaatgtccttcaca 671  Q
    |||||||||||||||| ||||| ||| || |||||| ||||| | ||||||||||| ||| |||||||| ||| ||  ||||||||||||    
T  5842783 aactcacataataagataaaagattatgtagattctgggtccttcagattcaagtatgccagtcagattttgtttcagatgtccttcaca 5842694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 347 - 408
Target Start/End: Complemental strand, 11449629 - 11449568
Alignment:
Q  347 ttcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtca 408  Q
    ||||||| || || ||||||||  ||||||||||||||| |||||||||||||||| |||||    
T  11449629 ttcttcaagtatttagctccttagataggcaatgatttgttagacgttggagaagagtgtca 11449568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 358 - 434
Target Start/End: Complemental strand, 19555541 - 19555465
Alignment:
Q  358 ttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctt 434  Q
    ||||| ||||| |||||||| |||||||| ||||||||||||||| |||||  ||| | ||| |||||| |||||||    
T  19555541 ttcagatccttatataggcattgatttgagagacgttggagaagagtgtcatcgcataaagattcgttgagaagctt 19555465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 583 - 666
Target Start/End: Complemental strand, 22316679 - 22316595
Alignment:
Q  583 aactcacataataagacaaaagcttaagtggattctaggtcccttagattcaagt-agcctgtcagattatgtgtctaatgtcct 666  Q
    |||||||| ||||||||||||||||| ||||||||| |||| || | |||||||| ||| ||||   |||||||||| |||||||    
T  22316679 aactcacagaataagacaaaagcttacgtggattctgggtctctcatattcaagtaagcttgtcgccttatgtgtctgatgtcct 22316595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 322 - 402
Target Start/End: Original strand, 19053054 - 19053133
Alignment:
Q  322 aaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaaga 402  Q
    ||||||| ||||||||||||  || ||||||| ||||||| |||||| ||||||||| |||| ||   |||||||||||||    
T  19053054 aaaaatagcagagtcttgttt-ttgttcttcaagtcttcaactccttatataggcaaggattagaggaacgttggagaaga 19053133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 78; Significance: 6e-36; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 293 - 471
Target Start/End: Complemental strand, 57223 - 57039
Alignment:
Q  293 ctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttatt------cttcaggtcttcagctccttttataggcaatgatttga 386  Q
    ||||||||||||| ||| |||||||||||||||||| || |||||||||| || ||      ||||||||||||||||||||||||||||| || |||||    
T  57223 ctatttgatttgacagagttttggcacagaaaaatagcatagtcttgttaattctttttcttcttcaggtcttcagctccttttataggcagtgctttga 57124  T
Q  387 tagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctttgatcaccaacattgtcccttttcctgatatggataa 471  Q
     |||| |||||||||| ||||||   |||||||||||||| |||| || |||||| || |||| |||||| ||||||||||||||    
T  57123 gagacattggagaagagtgtcagcaaaaatagagtcgttgggaagtttcgatcacgaatattgaccctttgcctgatatggataa 57039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 68; Significance: 5e-30; HSPs: 2)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 13984 - 13845
Alignment:
Q  116 acttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttacactctttttaactagtgagtgt 215  Q
    |||||||||||||||| |||| ||||||||||||  ||| ||||| || | |||||||| | ||||||| ||||||||||||||| ||| ||||||||||    
T  13984 acttatatgctcaagcgcgcaagcgagaaactttcgaaagtgttttcctctactgcaaacatgttaatttgttcttacactctttataaatagtgagtgt 13885  T
Q  216 aaactgaacaaataaacggactcacttcttaggatttcta 255  Q
    |||||||||||||||||  |||||||  || |||||||||    
T  13884 aaactgaacaaataaacatactcactcattgggatttcta 13845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 17754 - 17615
Alignment:
Q  116 acttatatgctcaagcacgcatgcgagaaactttgtaaaatgtttgccccaactgcaaataagttaattggttcttacactctttttaactagtgagtgt 215  Q
    |||||||||||||||| |||| ||||||||||||  ||| ||||| || | |||||||| | ||||||| ||||||||||||||| ||| ||||||||||    
T  17754 acttatatgctcaagcgcgcaagcgagaaactttcgaaagtgttttcctctactgcaaacatgttaatttgttcttacactctttataaatagtgagtgt 17655  T
Q  216 aaactgaacaaataaacggactcacttcttaggatttcta 255  Q
    |||||||||||||||||  |||||||  || |||||||||    
T  17654 aaactgaacaaataaacatactcactcattgggatttcta 17615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0711
Description:

Target: scaffold0711; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 294 - 434
Target Start/End: Complemental strand, 1911 - 1771
Alignment:
Q  294 tatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgt 393  Q
    |||||||||||||||| |  ||||| || |||||  || ||||||||||||| | ||||||||||||| |||||| |||||||| | |||||| ||||||    
T  1911 tatttgatttgatagagtaatggcatagtaaaattgcaaagtcttgttacttctgcttcaggtcttcaactccttatataggcagtcatttgagagacgt 1812  T
Q  394 tggagaagattgtcagtgcaaatagagtcgttgtgaagctt 434  Q
    ||||||||| |||||||| ||||||||| |||| |||||||    
T  1811 tggagaagagtgtcagtgtaaatagagttgttgagaagctt 1771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 95 - 133
Target Start/End: Complemental strand, 2105 - 2067
Alignment:
Q  95 tgctcaaggtttcaccaagggacttatatgctcaagcac 133  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  2105 tgctcaaggtgtcaccaagagacttatatgctcaagcac 2067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 262 - 438
Target Start/End: Original strand, 2386 - 2562
Alignment:
Q  262 aaacttgaaaataaatcccaactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttca 361  Q
    |||||||||||||||| | || | |||||| ||||||||||||| ||| |  || ||||| |||||| || |||||||||| || ||||| |||||||||    
T  2386 aaacttgaaaataaattctaagtgtttttcactatttgatttgacagagtaatgacacagtaaaatagcaaagtcttgttatttcttctttaggtcttca 2485  T
Q  362 gctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagtcgttgtgaagctttgat 438  Q
     |||||| |||| ||| |||||||| ||||||||||||||| || |||  ||||||||||||||  |||| ||||||    
T  2486 actccttatataagcagtgatttgagagacgttggagaagagtgccagcacaaatagagtcgttaagaagatttgat 2562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 51 - 162
Target Start/End: Original strand, 1276 - 1388
Alignment:
Q  51 taagactttaccctactcaatcacaactgactgagatttc-tatatgctcaaggtttcaccaagggacttatatgctcaagcacgcatgcgagaaacttt 149  Q
    ||||||||| || | ||||||||||||| ||| ||| ||| ||  ||||||||||||||||||| |||||||||||||||| ||||| |||||| |||||    
T  1276 taagactttcccttgctcaatcacaactaactcagacttcctacgtgctcaaggtttcaccaagagacttatatgctcaagtacgcaggcgagagacttt 1375  T
Q  150 gtaaaatgtttgc 162  Q
     ||||||| ||||    
T  1376 ctaaaatggttgc 1388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 10743 - 10638
Alignment:
Q  11 tgcaagatacttcacttgcttaagaacaattgcttaattataagactttaccctactcaatcacaactgactgaga-tttctatatgctcaaggtttcac 109  Q
    ||||||| ||||| |||||||||| |||| |||||||       |||||||||| ||||||||||||||||||||| || |||  |||| ||||||||||    
T  10743 tgcaagagacttcccttgcttaagtacaactgcttaaa------actttaccctcctcaatcacaactgactgagacttcctaggtgctaaaggtttcac 10650  T
Q  110 caagggacttat 121  Q
    |||| |||||||    
T  10649 caagagacttat 10638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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