View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8045_low_42 (Length: 218)

Name: NF8045_low_42
Description: NF8045
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8045_low_42
NF8045_low_42
[»] chr4 (23 HSPs)
chr4 (4-218)||(24478306-24478519)
chr4 (141-210)||(32057713-32057782)
chr4 (142-218)||(24870659-24870735)
chr4 (155-218)||(38944384-38944447)
chr4 (5-94)||(24469215-24469304)
chr4 (140-218)||(31263490-31263567)
chr4 (155-218)||(37340111-37340174)
chr4 (140-218)||(5333195-5333272)
chr4 (140-218)||(6487908-6487985)
chr4 (140-218)||(7413154-7413231)
chr4 (140-218)||(7459234-7459311)
chr4 (140-218)||(7512829-7512906)
chr4 (140-218)||(16476926-16477003)
chr4 (140-218)||(30044573-30044650)
chr4 (140-218)||(36526130-36526207)
chr4 (140-218)||(39284564-39284641)
chr4 (140-218)||(49882698-49882775)
chr4 (141-218)||(13389082-13389158)
chr4 (140-217)||(18813433-18813509)
chr4 (141-218)||(36752421-36752497)
chr4 (140-218)||(12821227-12821302)
chr4 (140-218)||(21378350-21378425)
chr4 (138-218)||(28758439-28758519)
[»] chr7 (18 HSPs)
chr7 (147-218)||(12645293-12645364)
chr7 (147-218)||(36251712-36251783)
chr7 (161-218)||(6328183-6328240)
chr7 (147-218)||(46021426-46021497)
chr7 (140-218)||(27396303-27396380)
chr7 (140-218)||(39580537-39580615)
chr7 (141-218)||(35157074-35157150)
chr7 (141-217)||(16842037-16842113)
chr7 (140-218)||(34708736-34708811)
chr7 (138-218)||(45957320-45957400)
chr7 (140-218)||(26794974-26795053)
chr7 (140-218)||(4674298-4674375)
chr7 (140-218)||(8037606-8037684)
chr7 (140-218)||(8059907-8059985)
chr7 (140-218)||(17895696-17895773)
chr7 (140-218)||(31717359-31717436)
chr7 (140-218)||(48612579-48612656)
chr7 (138-218)||(41708530-41708608)
[»] chr1 (19 HSPs)
chr1 (147-218)||(44836113-44836184)
chr1 (140-218)||(27078610-27078687)
chr1 (140-218)||(13048796-13048873)
chr1 (140-218)||(13053793-13053870)
chr1 (140-218)||(15324443-15324520)
chr1 (140-218)||(48392018-48392095)
chr1 (155-218)||(11080964-11081027)
chr1 (147-218)||(23225286-23225356)
chr1 (147-218)||(27227145-27227216)
chr1 (140-218)||(8312516-8312594)
chr1 (140-218)||(13018135-13018212)
chr1 (140-218)||(19338167-19338244)
chr1 (140-218)||(47429581-47429658)
chr1 (141-218)||(32947682-32947758)
chr1 (141-218)||(35758337-35758413)
chr1 (147-218)||(236632-236701)
chr1 (140-218)||(270312-270387)
chr1 (174-218)||(8793197-8793241)
chr1 (170-218)||(45458674-45458721)
[»] chr2 (16 HSPs)
chr2 (140-218)||(816408-816486)
chr2 (140-218)||(22999137-22999215)
chr2 (140-218)||(22382321-22382399)
chr2 (140-218)||(22914347-22914425)
chr2 (139-218)||(32517805-32517884)
chr2 (147-218)||(40710830-40710901)
chr2 (140-218)||(4014802-4014879)
chr2 (140-218)||(23497501-23497578)
chr2 (140-218)||(36216742-36216819)
chr2 (140-218)||(36755010-36755087)
chr2 (140-218)||(40812079-40812156)
chr2 (140-218)||(44948081-44948158)
chr2 (140-217)||(31671227-31671304)
chr2 (141-218)||(34667106-34667182)
chr2 (141-218)||(36754731-36754807)
chr2 (147-203)||(637041-637097)
[»] chr8 (26 HSPs)
chr8 (140-218)||(11100277-11100354)
chr8 (140-218)||(13403408-13403484)
chr8 (140-218)||(41562504-41562583)
chr8 (155-217)||(24197831-24197893)
chr8 (140-218)||(36586544-36586621)
chr8 (142-218)||(19649489-19649564)
chr8 (140-218)||(24242572-24242651)
chr8 (155-214)||(32778564-32778623)
chr8 (162-205)||(39709634-39709677)
chr8 (171-218)||(40418190-40418237)
chr8 (140-215)||(42007320-42007394)
chr8 (140-218)||(4430724-4430801)
chr8 (140-218)||(6317362-6317439)
chr8 (140-218)||(25063402-25063479)
chr8 (140-218)||(27817438-27817515)
chr8 (140-218)||(31639091-31639168)
chr8 (140-206)||(33540226-33540292)
chr8 (140-218)||(34711544-34711621)
chr8 (140-218)||(37295188-37295265)
chr8 (173-218)||(11021399-11021444)
chr8 (141-218)||(27849733-27849809)
chr8 (142-218)||(4977025-4977100)
chr8 (162-218)||(11109867-11109923)
chr8 (140-218)||(16501711-16501786)
chr8 (141-205)||(37820883-37820947)
chr8 (142-218)||(38953471-38953546)
[»] scaffold0879 (1 HSPs)
scaffold0879 (5-94)||(3478-3567)
[»] chr6 (6 HSPs)
chr6 (140-210)||(9297827-9297897)
chr6 (140-218)||(10531448-10531525)
chr6 (140-218)||(31444281-31444356)
chr6 (140-218)||(1855068-1855145)
chr6 (140-218)||(12795008-12795085)
chr6 (140-218)||(735507-735582)
[»] chr5 (33 HSPs)
chr5 (140-218)||(6672303-6672380)
chr5 (140-218)||(22792098-22792176)
chr5 (140-218)||(23311162-23311239)
chr5 (140-218)||(34856643-34856720)
chr5 (140-217)||(30528045-30528122)
chr5 (140-217)||(30568385-30568462)
chr5 (155-218)||(1271159-1271222)
chr5 (140-218)||(8595470-8595546)
chr5 (139-218)||(16496662-16496740)
chr5 (139-218)||(25328292-25328370)
chr5 (140-218)||(42645452-42645531)
chr5 (140-218)||(1244170-1244247)
chr5 (140-218)||(4165021-4165098)
chr5 (147-217)||(9640530-9640599)
chr5 (140-218)||(17869113-17869190)
chr5 (140-218)||(18625604-18625681)
chr5 (140-218)||(23074633-23074710)
chr5 (140-217)||(26266988-26267066)
chr5 (140-218)||(26802396-26802473)
chr5 (140-218)||(26809946-26810023)
chr5 (140-218)||(26824973-26825050)
chr5 (140-218)||(27389916-27389993)
chr5 (140-218)||(34930287-34930364)
chr5 (140-218)||(36569341-36569418)
chr5 (140-218)||(36790304-36790381)
chr5 (140-218)||(36854147-36854224)
chr5 (147-217)||(37191307-37191376)
chr5 (140-218)||(39150915-39150992)
chr5 (140-218)||(42448273-42448350)
chr5 (141-218)||(10393492-10393568)
chr5 (161-218)||(26526575-26526632)
chr5 (140-218)||(39527994-39528069)
chr5 (142-214)||(41215225-41215297)
[»] chr3 (22 HSPs)
chr3 (140-218)||(47069069-47069146)
chr3 (138-218)||(21129108-21129188)
chr3 (140-218)||(2096572-2096651)
chr3 (140-218)||(29212052-29212131)
chr3 (140-218)||(31828462-31828538)
chr3 (140-218)||(1242279-1242356)
chr3 (140-218)||(3440788-3440865)
chr3 (140-218)||(3917828-3917905)
chr3 (140-218)||(4232166-4232243)
chr3 (140-218)||(5998771-5998848)
chr3 (140-218)||(8128279-8128356)
chr3 (140-218)||(10229019-10229096)
chr3 (140-218)||(11029726-11029803)
chr3 (140-218)||(15003690-15003767)
chr3 (140-218)||(24910277-24910354)
chr3 (140-218)||(27002729-27002806)
chr3 (140-218)||(32960967-32961044)
chr3 (140-218)||(48555898-48555975)
chr3 (140-217)||(19163697-19163773)
chr3 (141-206)||(37278525-37278590)
chr3 (140-217)||(43897952-43898028)
chr3 (141-218)||(45475222-45475298)
[»] scaffold0223 (1 HSPs)
scaffold0223 (155-216)||(22984-23045)
[»] scaffold0160 (1 HSPs)
scaffold0160 (155-218)||(22144-22207)
[»] scaffold0515 (1 HSPs)
scaffold0515 (140-218)||(2540-2617)
[»] scaffold0402 (1 HSPs)
scaffold0402 (140-218)||(1230-1307)
[»] scaffold0306 (1 HSPs)
scaffold0306 (140-218)||(2540-2617)


Alignment Details
Target: chr4 (Bit Score: 175; Significance: 2e-94; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 24478306 - 24478519
Alignment:
Q  4 atattggtgcagacaaccatatttcgtataaataagcaaaattatgttttatgctataacttttgtgccactattgtcaatgaattaataagctacttca 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  24478306 atattggtgcagacaaccatatttcgtataaataagcaaaattatgttttatgctataacttttgtgccactattgtcaatgaattaataagctacttc- 24478404  T
Q  104 aacttaattacttgtgttgacatgaccattcggtacttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggagg 203  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||    
T  24478405 aacttaattacttgtgttgacgtgaccatacggtacttttttgtttggtacatagaggagatgacaaaaccatcataaacccacacatataaagtggagg 24478504  T
Q  204 taccggggttcgaac 218  Q
    || | | ||||||||    
T  24478505 tatcagagttcgaac 24478519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 32057713 - 32057782
Alignment:
Q  141 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggg 210  Q
    ||||| ||| ||| |||||||||||| |||||||||| ||||| |||||| | |||||||||||||||||    
T  32057713 ttttttttttgtagatagacgagatgacaaaaccatcataaactcacacacacaaagtggaggtaccggg 32057782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 24870735 - 24870659
Alignment:
Q  142 ttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||| ||||||| ||| |||||||| |||| ||||| ||||| ||||||  |||||||||||||||| |||||||||    
T  24870735 ttttttttggtagataaacgagatggcaaagccatcataaactcacacacgtaaagtggaggtaccgaggttcgaac 24870659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 38944384 - 38944447
Alignment:
Q  155 atagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||||||||| |||||||||| ||||| |||| | ||||||||||||||  |||||||||||    
T  38944384 atagacgagatgacaaaaccatcataaactcacatacataaagtggaggtattggggttcgaac 38944447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 24469304 - 24469215
Alignment:
Q  5 tattggtgcagacaaccatatttcgt-ataaataagcaaaattatgttttatgctataacttttgtgccactattgtcaatgaattaataa 94  Q
    |||||||  ||| ||||||||||| | ||||| |||||||| ||| |||||||||||| |||| ||| ||||||| |||||||||||||||    
T  24469304 tattggtcaagaaaaccatatttctttataaaaaagcaaaagtatcttttatgctatagcttt-gtgtcactattttcaatgaattaataa 24469215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 31263490 - 31263567
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| ||||||||||||||||||||||    
T  31263490 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacataa-gtggaggtaccggggttcgaac 31263567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 37340111 - 37340174
Alignment:
Q  155 atagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||||||||| ||||| |||| ||||| |||||| | ||||||||| ||||| |||||||||    
T  37340111 atagacgagatgacaaaatcatcataaactcacacacacaaagtggagataccgtggttcgaac 37340174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 5333195 - 5333272
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  5333195 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 5333272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 6487985 - 6487908
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  6487985 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 6487908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 7413231 - 7413154
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| ||||  |||  ||||| ||||||||||| |||||||||||||| |||||||    
T  7413231 ttttttttttggtagatagacgaaatgacaaagtcattataaactcacacatataa-gtggaggtaccgggattcgaac 7413154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 7459311 - 7459234
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| ||||  |||  ||||| ||||||||||| |||||||||||||| |||||||    
T  7459311 ttttttttttggtagatagacgaaatgacaaagtcattataaactcacacatataa-gtggaggtaccgggattcgaac 7459234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 7512906 - 7512829
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  7512906 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 7512829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 16476926 - 16477003
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  16476926 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 16477003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 30044573 - 30044650
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  30044573 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 30044650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 36526130 - 36526207
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  36526130 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 36526207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 39284564 - 39284641
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||||| ||  ||||| |||||| | || ||||||||||||||||||||||    
T  39284564 ttttttttttggtagatagacgaaatgacaaaactattataaactcacacacacaa-gtggaggtaccggggttcgaac 39284641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 49882698 - 49882775
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  49882698 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 49882775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 13389158 - 13389082
Alignment:
Q  141 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    ||||| || |||| |||||||| ||| |||| ||||  ||||| |||||| |||| ||||||||||||||||||||||    
T  13389158 ttttttttgggtagatagacgaaatggcaaagccattataaactcacacacataa-gtggaggtaccggggttcgaac 13389082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 18813509 - 18813433
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaa 217  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || |||||||||||||||||||||    
T  18813509 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaa 18813433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 36752497 - 36752421
Alignment:
Q  141 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    ||||| ||||||| |||||||| ||| |||| ||||  ||||| |||| |||||| ||||||||| ||||||||||||    
T  36752497 tttttttttggtagatagacgaaatgacaaagccattataaactcacatatataa-gtggaggtatcggggttcgaac 36752421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 12821302 - 12821227
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |   |||||||||||||||||||||||    
T  12821302 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacaca---agtggaggtaccggggttcgaac 12821227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 21378425 - 21378350
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| ||||||||   |||||||||||||| ||||||||    
T  21378425 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacata---agtggaggtaccggagttcgaac 21378350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 218
Target Start/End: Complemental strand, 28758519 - 28758439
Alignment:
Q  138 acttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||||| ||||||| ||||| |||||  ||||  |||  ||||| |||||| | ||||||||||||| |||||||||||    
T  28758519 acttttttttttggtagatagaagagattgcaaagtcattataaactcacacacacaaagtggaggtactggggttcgaac 28758439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 5e-21; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 12645293 - 12645364
Alignment:
Q  147 tttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    ||||||| |||||||||||| |||||||||| |||||||||||| ||||||||||||||| |||||||||||    
T  12645293 tttggtagatagacgagatgacaaaaccatcataaacccacacacataaagtggaggtacaggggttcgaac 12645364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 36251783 - 36251712
Alignment:
Q  147 tttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    ||||||| |||||||||||| |||||||||| ||||| |||||| ||||||||||  |||||||||||||||    
T  36251783 tttggtagatagacgagatggcaaaaccatcataaactcacacacataaagtggaaataccggggttcgaac 36251712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 6328183 - 6328240
Alignment:
Q  161 gagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| |||||||||| ||||| |||||| |||||||||||||| ||||||||||||    
T  6328183 gagatgacaaaaccatcataaactcacacacataaagtggaggtatcggggttcgaac 6328240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 46021426 - 46021497
Alignment:
Q  147 tttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    ||||||| ||||| |||||| |||| ||||| ||||| |||||| | ||| |||||||||||||||||||||    
T  46021426 tttggtagatagaagagatggcaaagccatcataaactcacacacacaaaatggaggtaccggggttcgaac 46021497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 27396303 - 27396380
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||||||||  ||||| |||||| | || ||||||||||||||||||||||    
T  27396303 ttttttttttggtagatagacgaaatggcaaaaccattataaactcacacacacaa-gtggaggtaccggggttcgaac 27396380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 39580537 - 39580615
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||  ||||| |||||| |||||||||| ||||  |||||| ||||||||||||||| ||| |||||||    
T  39580537 ttttttttttggttgatagaagagatggcaaaaccatcataaaatcacacacataaagtggaggtactgggattcgaac 39580615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 35157074 - 35157150
Alignment:
Q  141 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    ||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| ||||||||||||||||||||||    
T  35157074 tttttttttggtagatagacgaaatggcaaagccattataaactcacacacataa-gtggaggtaccggggttcgaac 35157150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 16842037 - 16842113
Alignment:
Q  141 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaa 217  Q
    ||||| ||| ||| |||||||||||   ||||||||| ||||| || ||| |||||||||||||| |||||||||||    
T  16842037 ttttttttttgtagatagacgagatagaaaaaccatcataaactcatacacataaagtggaggtatcggggttcgaa 16842113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 34708811 - 34708736
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| ||||||||   |||||||||||||||||||||||    
T  34708811 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacata---agtggaggtaccggggttcgaac 34708736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 218
Target Start/End: Original strand, 45957320 - 45957400
Alignment:
Q  138 acttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||||| ||||||| ||||| |||||| ||||  | || |||||  ||||| | |||||||||||||||||||||||||    
T  45957320 acttttttttttggtagatagaagagatgacaaagtcttcataaactaacacacacaaagtggaggtaccggggttcgaac 45957400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 26795053 - 26794974
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatata-aagtggaggtaccggggttcgaac 218  Q
    |||||| |||||||  ||||||| ||| |||||||||  ||||| |||||| ||| ||||||||||||||| ||||||||    
T  26795053 ttttttttttggtagttagacgaaatggcaaaaccattataaactcacacacatataagtggaggtaccggagttcgaac 26794974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 4674298 - 4674375
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  4674298 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 4674375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 8037684 - 8037606
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| || |||| |||||||||||| ||||| |||| ||||| || ||| ||||| ||||||||| || ||||||||    
T  8037684 tttttttttgggtagatagacgagatggcaaaatcatcataaactcatacacataaaatggaggtactggagttcgaac 8037606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 8059985 - 8059907
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||| ||| |||||||||||| ||||  |||   |||| |||||||| ||||| |||||||||||||||||||    
T  8059985 tttttttttttgtagatagacgagatgacaaagtcatgacaaactcacacatacaaagttgaggtaccggggttcgaac 8059907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 17895773 - 17895696
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  17895773 ttttttttttggtagatagacgaaatgacaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 17895696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 31717436 - 31717359
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| ||||||||||||| ||||||||    
T  31717436 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacataa-gtggaggtaccggagttcgaac 31717359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 48612656 - 48612579
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| ||| ||||||||||||||||||    
T  48612656 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacataa-gtgaaggtaccggggttcgaac 48612579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 218
Target Start/End: Original strand, 41708530 - 41708608
Alignment:
Q  138 acttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||||| ||||||| ||||| ||||||  ||| ||||| ||||| ||||  || |||||||||||| ||||||||||||    
T  41708530 acttttttttttggtagatagaagagatggtaaagccatcataaactcaca--tacaaagtggaggtatcggggttcgaac 41708608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 3e-16; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 44836113 - 44836184
Alignment:
Q  147 tttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    ||||||| ||||| |||||| |||| ||||| ||||| |||||||||||||||||| |||||||||||||||    
T  44836113 tttggtagatagatgagatgacaaagccatcataaactcacacatataaagtggagataccggggttcgaac 44836184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 27078687 - 27078610
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| ||| |||| ||| |||||||||| ||||| |||||| |||| ||||||||||||||||||||||    
T  27078687 ttttttttttggtaaataaacgaaatggcaaaaccatcataaactcacacacataa-gtggaggtaccggggttcgaac 27078610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 13048796 - 13048873
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||  ||| |||||||||  ||||| |||||| ||||| |||||||||||||||||||||    
T  13048796 ttttttttttggtagatagacggaatggcaaaaccattataaactcacacacataaa-tggaggtaccggggttcgaac 13048873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 13053793 - 13053870
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||  ||| |||||||||  ||||| |||||| ||||| |||||||||||||||||||||    
T  13053793 ttttttttttggtagatagacggaatggcaaaaccattataaactcacacacataaa-tggaggtaccggggttcgaac 13053870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 15324443 - 15324520
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| || |||| |||||||| ||| |||||||||| ||||| |||||| | || ||||||||||||||||||||||    
T  15324443 tttttttttaggtagatagacgaaatggcaaaaccatcataaactcacacacacaa-gtggaggtaccggggttcgaac 15324520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 48392095 - 48392018
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| ||||||||||||||||||||||    
T  48392095 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacataa-gtggaggtaccggggttcgaac 48392018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 11080964 - 11081027
Alignment:
Q  155 atagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||||||||| |||||||||| || || || ||| |||||||||||||| ||||||| ||||    
T  11080964 atagacgagatgacaaaaccatcatatactcatacacataaagtggaggtatcggggtttgaac 11081027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 23225286 - 23225356
Alignment:
Q  147 tttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    ||||||| |||||||| ||| |||||||||  ||||| |||||| | || ||||||||||||||||||||||    
T  23225286 tttggtatatagacgaaatggcaaaaccattataaactcacacacacaa-gtggaggtaccggggttcgaac 23225356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 27227216 - 27227145
Alignment:
Q  147 tttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    ||||||| |||||||||||| ||||  |||| ||||| || ||| ||||||||||| ||| |||||||||||    
T  27227216 tttggtagatagacgagatggcaaagtcatcctaaactcatacacataaagtggagttacaggggttcgaac 27227145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 8312516 - 8312594
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| ||| | |||||| |||| ||| | ||||| ||| || | |||||||||||||||||||||||||    
T  8312516 ttttttttttggtagataaaagagatggcaaagccaccataaactcactcacacaaagtggaggtaccggggttcgaac 8312594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 13018212 - 13018135
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  |||||  ||||||| || ||||||||||||||||||||||    
T  13018212 ttttttttttggtagatagacgaaatgacaaagccattataaactgacacatacaa-gtggaggtaccggggttcgaac 13018135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 19338167 - 19338244
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  19338167 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 19338244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 47429581 - 47429658
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| |||||||||||||| |||||||    
T  47429581 ttttttttttggtagatagacgaaatgacaaagccattataaactcacacacataa-gtggaggtaccgggattcgaac 47429658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 32947758 - 32947682
Alignment:
Q  141 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    ||||| |||||||||||||  | ||| |||||||||| ||||| |||||| ||||||||||| |  ||||||||||||    
T  32947758 tttttttttggtacatagaaaa-atgacaaaaccatcataaactcacacacataaagtggagatgtcggggttcgaac 32947682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 35758413 - 35758337
Alignment:
Q  141 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    ||||| ||||||| |||||||| |||  ||| ||||  ||||| |||||| |||| ||||||||||||||||||||||    
T  35758413 tttttttttggtagatagacgaaatggtaaagccattataaactcacacacataa-gtggaggtaccggggttcgaac 35758337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 236701 - 236632
Alignment:
Q  147 tttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    ||||||| |||||| ||||| ||||  |||| ||||| ||||||||  ||||| ||||||||||||||||||    
T  236701 tttggtagatagacaagatgacaaagtcatcataaactcacacata--aagtgaaggtaccggggttcgaac 236632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 270312 - 270387
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |   |||||||||||||||||||||||    
T  270312 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacaca---agtggaggtaccggggttcgaac 270387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 8793197 - 8793241
Alignment:
Q  174 catcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||| ||||| |||||| | |||||||||||||||||||||||||    
T  8793197 catcataaactcacacacacaaagtggaggtaccggggttcgaac 8793241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 45458674 - 45458721
Alignment:
Q  170 aaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    ||||||| ||||||||||||| ||||| |||||||| ||||||||||||    
T  45458674 aaaccattgtaaacccacacacataaa-tggaggtatcggggttcgaac 45458721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 816486 - 816408
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||| ||| |||||||||||| |||||||||| ||||| |||||| | |||||||| ||||||||||||||||    
T  816486 tttttttttttgtagatagacgagatggcaaaaccatcataaactcacacacacaaagtggatgtaccggggttcgaac 816408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 22999215 - 22999137
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||||||| |||||||||| ||||| |||||| | |||||||||||  ||||||||||||    
T  22999215 ttttttttttggtagatagacgagatgacaaaaccatcataaactcacacacacaaagtggaggtgtcggggttcgaac 22999137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 22382321 - 22382399
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||||||| |||||||||| ||||| |||| | | |||||||||||  ||||||||||||    
T  22382321 ttttttttttggtagatagacgagatgacaaaaccatcataaactcacatacacaaagtggaggtgtcggggttcgaac 22382399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 22914347 - 22914425
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||||||| |||||||||| ||||| |||| | | |||||||||||  ||||||||||||    
T  22914347 ttttttttttggtagatagacgagatgacaaaaccatcataaactcacatacacaaagtggaggtgtcggggttcgaac 22914425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 218
Target Start/End: Original strand, 32517805 - 32517884
Alignment:
Q  139 cttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    ||||||| ||||||| |||||  ||||| ||||  |||| ||||| |||||| | |||||||||||||||||||||||||    
T  32517805 cttttttttttggtagatagataagatggcaaagtcatcataaactcacacacacaaagtggaggtaccggggttcgaac 32517884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 40710830 - 40710901
Alignment:
Q  147 tttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    ||||||| |||||||| ||  |||| ||||| ||||| |||| | | |||||||||||||||||||||||||    
T  40710830 tttggtagatagacgaaattgcaaagccatcataaacacacaaacacaaagtggaggtaccggggttcgaac 40710901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 4014802 - 4014879
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  4014802 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 4014879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 23497501 - 23497578
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  23497501 ttttttttttggtagatagacgaaatgacaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 23497578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 36216742 - 36216819
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  36216742 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 36216819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 36755087 - 36755010
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  36755087 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 36755010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 40812156 - 40812079
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| ||| ||||||||||||||||||    
T  40812156 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacataa-gtgaaggtaccggggttcgaac 40812079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 44948158 - 44948081
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||||| || ||||||||||||| ||||||||    
T  44948158 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacatacaa-gtggaggtaccggagttcgaac 44948081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 31671304 - 31671227
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaa 217  Q
    |||||| ||||||| |||||||||| | ||||  |||| ||||| |||||||||||||||| |  | |||||||||||    
T  31671304 ttttttttttggtagatagacgagacggcaaagtcatcataaactcacacatataaagtggggtaatcggggttcgaa 31671227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 34667182 - 34667106
Alignment:
Q  141 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    ||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  34667182 tttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 34667106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 36754731 - 36754807
Alignment:
Q  141 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    ||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  36754731 tttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 36754807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 637097 - 637041
Alignment:
Q  147 tttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggagg 203  Q
    ||||||| |||||||||||| ||||| |||| ||||| |||||| | ||||||||||    
T  637097 tttggtagatagacgagatggcaaaatcatcataaactcacacacacaaagtggagg 637041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 11100277 - 11100354
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||||||||  |||||||||||| |  ||||||||||||||||||||||||    
T  11100277 ttttttttttggtaaatagacgaaatgacaaaaccattataaacccacacaca-caagtggaggtaccggggttcgaac 11100354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 13403408 - 13403484
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| ||||| ||||||  ||||||||| ||||| |||||| |  ||||||||||||||||||||||||    
T  13403408 ttttttttttggtagatagaagagatggaaaaaccatcataaactcacacaca--aagtggaggtaccggggttcgaac 13403484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 41562583 - 41562504
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatata-aagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||||||||  ||||| |||||| | | ||||||||||||||||||||||||    
T  41562583 ttttttttttggtagatagacgaaatggcaaaaccattataaactcacacacacacaagtggaggtaccggggttcgaac 41562504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 24197831 - 24197893
Alignment:
Q  155 atagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaa 217  Q
    ||||| |||||| |||||||||| ||||| |||||| |||||||||||||| ||| |||||||    
T  24197831 atagaagagatgacaaaaccatcataaactcacacacataaagtggaggtatcggagttcgaa 24197893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 36586621 - 36586544
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||||| || ||||||||||||||||||||||    
T  36586621 ttttttttttggtagatagacgaaatgacaaagccattataaactcacacatacaa-gtggaggtaccggggttcgaac 36586544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 19649489 - 19649564
Alignment:
Q  142 ttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| ||||||||||||||||||||||    
T  19649489 ttttttttggtagatagacgaaatgacaaagccattataaactcacacacataa-gtggaggtaccggggttcgaac 19649564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 24242572 - 24242651
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatata-aagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| ||||  ||||||||||  ||||| | | ||||||||||||||||||||||||    
T  24242572 ttttttttttggtagatagacgaaatgacaaagtcatcgtaaactgacacacacacaagtggaggtaccggggttcgaac 24242651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 32778623 - 32778564
Alignment:
Q  155 atagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttc 214  Q
    |||||||||||| |||| ||||| |||||||||||| | |||||||||||| ||| ||||    
T  32778623 atagacgagatgacaaagccatcataaacccacacacacaaagtggaggtatcggagttc 32778564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 205
Target Start/End: Original strand, 39709634 - 39709677
Alignment:
Q  162 agatgccaaaaccatcgtaaacccacacatataaagtggaggta 205  Q
    ||||| |||||||||| ||||| |||||||||||||||||||||    
T  39709634 agatggcaaaaccatcataaactcacacatataaagtggaggta 39709677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 40418237 - 40418190
Alignment:
Q  171 aaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    ||||||| ||||| |||||| |||||||||||||| ||||||||||||    
T  40418237 aaccatcataaactcacacacataaagtggaggtatcggggttcgaac 40418190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 215
Target Start/End: Original strand, 42007320 - 42007394
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcg 215  Q
    |||||| ||| ||| |||||||| ||| ||||||||| |||||| |||||| |||| |||||||||||||| ||||    
T  42007320 ttttttttttagtaaatagacgaaatgacaaaaccattgtaaactcacacacataa-gtggaggtaccgggattcg 42007394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 4430724 - 4430801
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  4430724 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 4430801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 6317439 - 6317362
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  6317439 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 6317362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 25063479 - 25063402
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  25063479 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 25063402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 27817438 - 27817515
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  27817438 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 27817515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 31639091 - 31639168
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| ||||  |||  |||||||||||| || ||||||||||||||| ||||||||    
T  31639091 ttttttttttggtagatagacgaaatggcaaagtcattataaacccacacacat-aagtggaggtaccggagttcgaac 31639168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 206
Target Start/End: Complemental strand, 33540292 - 33540226
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtac 206  Q
    |||||| ||||||| |||||||||||| |||| ||||| ||||| |||||||| || |||| |||||    
T  33540292 ttttttttttggtagatagacgagatggcaaagccatcataaactcacacatacaatgtggtggtac 33540226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 34711544 - 34711621
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  34711544 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 34711621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 37295265 - 37295188
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  37295265 ttttttttttggtagatagacgaaatgacaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 37295188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 11021444 - 11021399
Alignment:
Q  173 ccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    ||||| ||||| |||||| | |||||||||||||||||||||||||    
T  11021444 ccatcataaactcacacacacaaagtggaggtaccggggttcgaac 11021399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 27849733 - 27849809
Alignment:
Q  141 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    ||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  27849733 tttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 27849809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 4977025 - 4977100
Alignment:
Q  142 ttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  4977025 ttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 4977100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 11109867 - 11109923
Alignment:
Q  162 agatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    ||||| ||||| |||| |||||  ||||| ||||||||||| |||||||||||||||    
T  11109867 agatgacaaaatcatcataaactaacacacataaagtggagataccggggttcgaac 11109923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 16501786 - 16501711
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |   |||||||||||||||||||||||    
T  16501786 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacaca---agtggaggtaccggggttcgaac 16501711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 37820883 - 37820947
Alignment:
Q  141 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggta 205  Q
    ||||| ||||| | ||||| |||||| |||||||||| ||||| |||||| | ||||||||||||    
T  37820883 tttttttttggcagatagaagagatgacaaaaccatcataaactcacacacacaaagtggaggta 37820947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 38953471 - 38953546
Alignment:
Q  142 ttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  38953471 ttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 38953546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0879 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0879
Description:

Target: scaffold0879; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 3567 - 3478
Alignment:
Q  5 tattggtgcagacaaccatatttcgt-ataaataagcaaaattatgttttatgctataacttttgtgccactattgtcaatgaattaataa 94  Q
    |||||||  ||| ||||||||||| | ||||| |||||||| ||| |||||||||||| |||| ||| ||||||| |||||||||||||||    
T  3567 tattggtcaagaaaaccatatttctttataaaaaagcaaaagtatcttttatgctatagcttt-gtgtcactattttcaatgaattaataa 3478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000008; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 210
Target Start/End: Complemental strand, 9297897 - 9297827
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggg 210  Q
    |||||| || |||| ||||||| |||| |||||||||| ||||| |||||| | |||||||||||||||||    
T  9297897 tttttttttgggtagatagacgggatggcaaaaccatcataaactcacacacacaaagtggaggtaccggg 9297827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 10531525 - 10531448
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| ||||||||  || |||| ||||  ||||| |||||||| |||||||||||||||||||||||||    
T  10531525 ttttttttttggtaaatagacgaagtggcaaagccattataaactcacacata-aaagtggaggtaccggggttcgaac 10531448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 31444281 - 31444356
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| ||||||||   |||||||||||||||||||||||    
T  31444281 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacata---agtggaggtaccggggttcgaac 31444356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 1855145 - 1855068
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  1855145 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 1855068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 12795008 - 12795085
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| |||||||||||| |||||||||    
T  12795008 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacataa-gtggaggtaccgcggttcgaac 12795085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 735582 - 735507
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |   |||||||||||||||||||||||    
T  735582 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacaca---agtggaggtaccggggttcgaac 735507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.00000000008; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 6672380 - 6672303
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||||||||  ||||| |||||| | || ||||||||||||||||||||||    
T  6672380 ttttttttttggtagatagacgaaatggcaaaaccattataaactcacacacacaa-gtggaggtaccggggttcgaac 6672303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 22792098 - 22792176
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||||||||| || ||| ||||| |||| ||||| |||||| | |||||||||||  ||||||||||||    
T  22792098 ttttttttttggtacatagaagaaatggcaaaatcatcataaactcacacacacaaagtggaggtgtcggggttcgaac 22792176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 23311162 - 23311239
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| ||||||||||||||||||||||    
T  23311162 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacataa-gtggaggtaccggggttcgaac 23311239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 34856720 - 34856643
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| ||||||||||||||||||||||    
T  34856720 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacataa-gtggaggtaccggggttcgaac 34856643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 30528122 - 30528045
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaa 217  Q
    |||||| ||||||| ||||| || |||  ||| ||||||||||| |||||| | ||||||||||| ||||||||||||    
T  30528122 ttttttttttggtagatagaagaaatggtaaagccatcgtaaactcacacacacaaagtggaggtgccggggttcgaa 30528045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 30568462 - 30568385
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaa 217  Q
    |||||| ||||||| ||||| || |||  ||| ||||||||||| |||||| | ||||||||||| ||||||||||||    
T  30568462 ttttttttttggtagatagaagaaatggtaaagccatcgtaaactcacacacacaaagtggaggtgccggggttcgaa 30568385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 1271222 - 1271159
Alignment:
Q  155 atagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||||||||| |||||| ||| ||||| |||||||||||| ||||||||  ||| |||||||    
T  1271222 atagacgagatgacaaaacaatcataaactcacacatataaaatggaggtattgggattcgaac 1271159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 8595470 - 8595546
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| ||||| |||||| |||  ||||| |||  || |||||| |||||||||||||||||||||||||    
T  8595470 ttttttttttggtagatagaagagatggcaatgccatcataa--cctcacatacaaagtggaggtaccggggttcgaac 8595546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 218
Target Start/End: Complemental strand, 16496740 - 16496662
Alignment:
Q  139 cttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    ||||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  16496740 cttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 16496662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 218
Target Start/End: Original strand, 25328292 - 25328370
Alignment:
Q  139 cttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    ||||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  25328292 cttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 25328370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 42645452 - 42645531
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatata-aagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||||| | |||||||||||||| |||||||||    
T  42645452 ttttttttttggtagatagacgaaatgacaaagccattataaactcacacatacataagtggaggtaccgaggttcgaac 42645531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 1244170 - 1244247
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||||||||||  | ||||||||||||| ||||||||||    
T  1244170 ttttttttttggtagatagacgatatggcaaagccattataaacccacaca-ctcaagtggaggtaccagggttcgaac 1244247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 4165098 - 4165021
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  4165098 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 4165021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 9640530 - 9640599
Alignment:
Q  147 tttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaa 217  Q
    ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| |||||||||||||||||||||    
T  9640530 tttggtagatagacgaaatggcaaagccattataaactcacacacataa-gtggaggtaccggggttcgaa 9640599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 17869113 - 17869190
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||  |||||| |||| ||||||||||||||||||||||    
T  17869113 ttttttttttggtagatagacgaaatggcaaagccattataaattcacacacataa-gtggaggtaccggggttcgaac 17869190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 18625604 - 18625681
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||||| || |||||||||| |||||||||||    
T  18625604 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacatacaa-gtggaggtactggggttcgaac 18625681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 23074633 - 23074710
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  23074633 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 23074710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 26266988 - 26267066
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatata-aagtggaggtaccggggttcgaa 217  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | | |||||||||||||||||||||||    
T  26266988 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacacaagtggaggtaccggggttcgaa 26267066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 26802473 - 26802396
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  26802473 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 26802396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 26810023 - 26809946
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  26810023 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 26809946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 26825050 - 26824973
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  26825050 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 26824973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 27389916 - 27389993
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| |||||||||||| |||||||||    
T  27389916 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacataa-gtggaggtaccgaggttcgaac 27389993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 34930364 - 34930287
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  34930364 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 34930287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 36569418 - 36569341
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  36569418 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 36569341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 36790304 - 36790381
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  36790304 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 36790381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 36854147 - 36854224
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  36854147 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 36854224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 37191376 - 37191307
Alignment:
Q  147 tttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaa 217  Q
    ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| |||||||||||||||||||||    
T  37191376 tttggtagatagacgaaatggcaaagccattataaactcacacacataa-gtggaggtaccggggttcgaa 37191307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 39150915 - 39150992
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  39150915 ttttttttttggtagatagacgaaatgtcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 39150992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 42448350 - 42448273
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  42448350 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 42448273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 10393492 - 10393568
Alignment:
Q  141 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    ||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  10393492 tttttttttggtagatagacgaaatgacaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 10393568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 26526632 - 26526575
Alignment:
Q  161 gagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||  |||| ||||| |||||| |||||||||||||||||| ||||||||    
T  26526632 gagatggcaaattcatcataaactcacacacataaagtggaggtaccggagttcgaac 26526575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 39528069 - 39527994
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |   |||||||||||||||||||||||    
T  39528069 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacaca---agtggaggtaccggggttcgaac 39527994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 41215225 - 41215297
Alignment:
Q  142 ttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttc 214  Q
    |||| ||||||| || ||||||||| |||||| ||| ||||| || | | |||||||||||||| ||||||||    
T  41215225 ttttttttggtagattgacgagatgacaaaactatcataaactcatatacataaagtggaggtatcggggttc 41215297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.00000000008; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 47069146 - 47069069
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||||||||  ||||| |||||| | || ||||||||||||||||||||||    
T  47069146 ttttttttttggtagatagacgaaatggcaaaaccattataaactcacacacacaa-gtggaggtaccggggttcgaac 47069069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 218
Target Start/End: Complemental strand, 21129188 - 21129108
Alignment:
Q  138 acttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||| ||| ||||||| |||||| ||||| |||| ||||| ||||| |||| | | ||||| |||||||||||||||||||    
T  21129188 acttctttttttggtagatagacaagatggcaaagccatcataaactcacaaacacaaagtagaggtaccggggttcgaac 21129108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 2096572 - 2096651
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatata-aagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | | ||||||||||||||||||||||||    
T  2096572 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacacaagtggaggtaccggggttcgaac 2096651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 29212052 - 29212131
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatata-aagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | | ||||||||||||||||||||||||    
T  29212052 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacacaagtggaggtaccggggttcgaac 29212131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 31828538 - 31828462
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| ||||| |||||| |||||||||| ||||| |||||| |  |||||||||| |||| ||||||||    
T  31828538 ttttttttttggtagatagaagagatggcaaaaccatcataaacacacacaca--aagtggaggtgccggagttcgaac 31828462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 1242356 - 1242279
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  1242356 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 1242279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 3440865 - 3440788
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  3440865 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 3440788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 3917905 - 3917828
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  3917905 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 3917828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 4232166 - 4232243
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  4232166 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 4232243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 5998771 - 5998848
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  5998771 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 5998848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 8128279 - 8128356
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  8128279 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 8128356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 10229096 - 10229019
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  10229096 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 10229019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 11029803 - 11029726
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  11029803 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 11029726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 15003767 - 15003690
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||  ||||||||||||||||||||||    
T  15003767 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacatag-gtggaggtaccggggttcgaac 15003690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 24910277 - 24910354
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  24910277 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 24910354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 27002729 - 27002806
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||| ||| |||||||| ||| |||||||||  ||||| |||||| | || ||||||||||||||||||||||    
T  27002729 tttttttttttgtagatagacgaaatgacaaaaccattataaactcacacacacaa-gtggaggtaccggggttcgaac 27002806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 32960967 - 32961044
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  32960967 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 32961044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 48555975 - 48555898
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  48555975 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 48555898  T

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Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 19163773 - 19163697
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaa 217  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || |||||||||||||||||||||    
T  19163773 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaa 19163697  T

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Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 37278525 - 37278590
Alignment:
Q  141 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtac 206  Q
    ||||| ||| ||| |||||||||||| ||||  |||| ||||| |||||||| |||||||||||||    
T  37278525 ttttttttttgtagatagacgagatgacaaagtcatcataaactcacacatacaaagtggaggtac 37278590  T

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Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 43897952 - 43898028
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaa 217  Q
    |||||| ||||||| |||||||| ||| ||||  ||| |||||| |||||| | || |||||||||||||||||||||    
T  43897952 ttttttttttggtagatagacgaaatggcaaagtcattgtaaactcacacacacaa-gtggaggtaccggggttcgaa 43898028  T

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Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 45475222 - 45475298
Alignment:
Q  141 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    ||||| ||||||| |||||||| ||| |||||||||  ||||| |||||| | || ||||||||| ||||||||||||    
T  45475222 tttttttttggtagatagacgaaatggcaaaaccattataaactcacacacacaa-gtggaggtatcggggttcgaac 45475298  T

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Target: scaffold0223 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 23045 - 22984
Alignment:
Q  155 atagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcga 216  Q
    ||||||| |||| |||||||||| ||||| || ||| | |||||||||||||||||||||||    
T  23045 atagacgggatgacaaaaccatcataaactcaaacacacaaagtggaggtaccggggttcga 22984  T

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Target: scaffold0160 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 22207 - 22144
Alignment:
Q  155 atagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||||||||| ||||  |||| ||||| |||||| | |||||||||||| ||||||||||||    
T  22207 atagacgagatgacaaagtcatcataaactcacacacacaaagtggaggtatcggggttcgaac 22144  T

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Target: scaffold0515 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 2617 - 2540
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| |||| || |||||||| ||| |||| ||||  ||||| |||||| |||| ||||||||||||||||||||||    
T  2617 ttttttttttgatagatagacgaaatggcaaagccattataaactcacacacataa-gtggaggtaccggggttcgaac 2540  T

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Target: scaffold0402 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 1230 - 1307
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  1230 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 1307  T

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Target: scaffold0306 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 2617 - 2540
Alignment:
Q  140 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 218  Q
    |||||| |||| || |||||||| ||| |||| ||||  ||||| |||||| |||| ||||||||||||||||||||||    
T  2617 ttttttttttgatagatagacgaaatggcaaagccattataaactcacacacataa-gtggaggtaccggggttcgaac 2540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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