View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8047_high_18 (Length: 226)
Name: NF8047_high_18
Description: NF8047
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8047_high_18 |
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Alignment Details
Target: chr3 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 26 - 208
Target Start/End: Complemental strand, 48897679 - 48897497
Alignment:
| Q |
26 |
aaattcttgatatagtttgttgttgtatctatcatttcccgacaataaatatgggtatcagagtgaccggtgcgtttcaaaatttaatttaattcatatt |
125 |
Q |
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| T |
48897679 |
aaattcttgatatagtttgttgttgtaactatcatttcccgacaataaatatgggtatcagagtgaccggtgcgtttcaaaattttatttaattcatatt |
48897580 |
T |
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| Q |
126 |
attaacaaaatgcttcagattcacgtgaacttcaccaacaaaatgcataagtaaccataaaagctacttgcgagatggttagt |
208 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48897579 |
attaacaaaatgcttcagattcacgtgaacttcaccaacaaaatgcataagtaaccataaaagctacttgcgagatggttagt |
48897497 |
T |
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