View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8048_high_5 (Length: 468)

Name: NF8048_high_5
Description: NF8048
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8048_high_5
NF8048_high_5
[»] chr6 (31 HSPs)
chr6 (135-452)||(8650792-8651115)
chr6 (135-452)||(4580310-4580633)
chr6 (135-452)||(25354059-25354382)
chr6 (137-452)||(21190855-21191179)
chr6 (135-398)||(25343472-25343736)
chr6 (149-452)||(31756202-31756516)
chr6 (243-452)||(32035275-32035488)
chr6 (257-452)||(21782742-21782941)
chr6 (304-452)||(8662770-8662922)
chr6 (149-452)||(17581496-17581796)
chr6 (290-452)||(21197010-21197174)
chr6 (287-452)||(18778584-18778754)
chr6 (290-453)||(21770545-21770711)
chr6 (290-398)||(21783356-21783462)
chr6 (290-398)||(21789579-21789685)
chr6 (149-225)||(21197250-21197326)
chr6 (135-225)||(21770787-21770877)
chr6 (318-437)||(34603336-34603457)
chr6 (318-437)||(34724613-34724734)
chr6 (304-453)||(6097999-6098153)
chr6 (135-218)||(21783545-21783636)
chr6 (135-218)||(21789768-21789859)
chr6 (9-51)||(8651377-8651419)
chr6 (9-51)||(17581147-17581189)
chr6 (9-51)||(32030040-32030082)
chr6 (9-51)||(21191444-21191486)
chr6 (9-51)||(21771138-21771180)
chr6 (302-366)||(1106229-1106294)
chr6 (160-226)||(20745431-20745497)
chr6 (149-206)||(30905821-30905877)
chr6 (9-43)||(13007218-13007252)
[»] chr2 (25 HSPs)
chr2 (135-452)||(36750262-36750585)
chr2 (149-452)||(28682934-28683241)
chr2 (135-452)||(13455947-13456270)
chr2 (135-452)||(13461888-13462211)
chr2 (135-452)||(44716793-44717117)
chr2 (149-452)||(31002240-31002548)
chr2 (135-452)||(30965175-30965499)
chr2 (149-452)||(31008218-31008526)
chr2 (161-452)||(13149675-13149968)
chr2 (135-452)||(35090638-35090964)
chr2 (135-452)||(35084665-35084991)
chr2 (149-452)||(11048542-11048847)
chr2 (149-452)||(35438699-35439001)
chr2 (299-452)||(23343574-23343731)
chr2 (149-225)||(23343417-23343493)
chr2 (133-223)||(19879444-19879536)
chr2 (162-224)||(29034697-29034759)
chr2 (298-452)||(29833222-29833378)
chr2 (9-51)||(28683518-28683560)
chr2 (9-51)||(35439944-35439986)
chr2 (163-225)||(29833079-29833142)
chr2 (9-48)||(35085257-35085296)
chr2 (9-51)||(13461583-13461625)
chr2 (166-272)||(28765461-28765567)
chr2 (345-384)||(31651664-31651703)
[»] chr4 (41 HSPs)
chr4 (135-452)||(24287834-24288155)
chr4 (135-452)||(6257194-6257517)
chr4 (149-435)||(10739346-10739635)
chr4 (149-435)||(10953115-10953404)
chr4 (150-452)||(33458255-33458562)
chr4 (135-452)||(48160807-48161126)
chr4 (135-452)||(48167026-48167345)
chr4 (184-435)||(10733253-10733507)
chr4 (184-435)||(10947022-10947276)
chr4 (149-394)||(33461444-33461688)
chr4 (149-452)||(49976450-49976757)
chr4 (149-452)||(50168458-50168763)
chr4 (149-398)||(44831659-44831915)
chr4 (290-452)||(26963330-26963494)
chr4 (149-283)||(10733514-10733648)
chr4 (149-283)||(10947283-10947417)
chr4 (150-377)||(4632246-4632482)
chr4 (149-429)||(19686341-19686617)
chr4 (135-225)||(26957023-26957115)
chr4 (150-392)||(3769434-3769673)
chr4 (345-452)||(26956818-26956929)
chr4 (368-452)||(4632869-4632957)
chr4 (287-394)||(50427369-50427483)
chr4 (155-257)||(35177666-35177770)
chr4 (325-422)||(9237402-9237502)
chr4 (150-223)||(17627002-17627075)
chr4 (149-226)||(32284543-32284620)
chr4 (372-452)||(34308061-34308144)
chr4 (9-51)||(10733923-10733965)
chr4 (9-51)||(10947692-10947734)
chr4 (9-51)||(26957377-26957419)
chr4 (9-51)||(48166722-48166764)
chr4 (154-224)||(50155827-50155897)
chr4 (9-51)||(50168138-50168180)
chr4 (149-226)||(33045108-33045185)
chr4 (319-375)||(50155990-50156046)
chr4 (357-452)||(55473134-55473230)
chr4 (135-176)||(26971824-26971867)
chr4 (167-210)||(50427238-50427281)
chr4 (9-51)||(17627349-17627391)
chr4 (328-384)||(28704553-28704609)
[»] chr3 (38 HSPs)
chr3 (135-452)||(11839714-11840037)
chr3 (133-452)||(17055781-17056106)
chr3 (135-452)||(10244323-10244646)
chr3 (135-452)||(10238201-10238524)
chr3 (149-453)||(30051090-30051398)
chr3 (135-452)||(38455541-38455862)
chr3 (135-452)||(10760639-10760962)
chr3 (135-452)||(38449054-38449375)
chr3 (149-452)||(49151475-49151782)
chr3 (149-452)||(49157542-49157849)
chr3 (135-452)||(42191209-42191532)
chr3 (135-452)||(42197151-42197474)
chr3 (149-452)||(8331650-8331957)
chr3 (149-452)||(55003401-55003705)
chr3 (169-452)||(11846052-11846340)
chr3 (149-452)||(13444921-13445221)
chr3 (149-453)||(53069042-53069345)
chr3 (135-283)||(10769131-10769281)
chr3 (288-452)||(10766860-10767028)
chr3 (246-452)||(17593270-17593481)
chr3 (150-452)||(48128036-48128335)
chr3 (287-399)||(34300498-34300610)
chr3 (149-244)||(13837537-13837632)
chr3 (298-452)||(28964881-28965036)
chr3 (135-223)||(26429639-26429729)
chr3 (150-453)||(46656538-46656855)
chr3 (171-385)||(12108728-12108945)
chr3 (362-452)||(24643540-24643635)
chr3 (9-51)||(10238787-10238829)
chr3 (9-51)||(49157223-49157265)
chr3 (149-225)||(28964743-28964811)
chr3 (9-51)||(10761224-10761266)
chr3 (9-51)||(11840300-11840342)
chr3 (183-225)||(24643773-24643815)
chr3 (165-225)||(34300369-34300429)
chr3 (9-51)||(38449637-38449679)
chr3 (9-51)||(42191795-42191837)
chr3 (9-51)||(24644065-24644107)
[»] chr1 (19 HSPs)
chr1 (135-452)||(25387493-25387816)
chr1 (135-452)||(25381524-25381847)
chr1 (149-452)||(34739849-34740156)
chr1 (135-452)||(50306045-50306359)
chr1 (135-452)||(31057892-31058214)
chr1 (135-451)||(31051392-31051718)
chr1 (149-398)||(8092893-8093142)
chr1 (135-452)||(1078092-1078394)
chr1 (149-452)||(44409864-44410180)
chr1 (149-453)||(24926743-24927057)
chr1 (150-452)||(27955025-27955330)
chr1 (149-453)||(24963690-24964005)
chr1 (152-444)||(38151973-38152257)
chr1 (167-452)||(12183568-12183867)
chr1 (9-51)||(24927343-24927385)
chr1 (9-51)||(25382110-25382152)
chr1 (9-51)||(12184171-12184213)
chr1 (9-51)||(31057588-31057630)
chr1 (148-200)||(23254012-23254063)
[»] chr7 (29 HSPs)
chr7 (149-452)||(3817300-3817607)
chr7 (149-452)||(3811158-3811465)
chr7 (149-452)||(28420948-28421255)
chr7 (135-452)||(20238798-20239121)
chr7 (149-452)||(351650-351956)
chr7 (149-452)||(339243-339541)
chr7 (135-453)||(5979161-5979486)
chr7 (149-449)||(35147996-35148305)
chr7 (239-452)||(42767283-42767501)
chr7 (159-436)||(43539853-43540138)
chr7 (149-327)||(15843810-15843988)
chr7 (149-327)||(15860919-15861097)
chr7 (135-452)||(5849378-5849696)
chr7 (180-452)||(12803893-12804170)
chr7 (149-452)||(22741907-22742225)
chr7 (290-431)||(26383630-26383774)
chr7 (287-419)||(30219269-30219404)
chr7 (149-248)||(35150736-35150837)
chr7 (149-452)||(26380947-26381238)
chr7 (150-316)||(7608306-7608475)
chr7 (150-226)||(3677889-3677965)
chr7 (318-394)||(18666547-18666622)
chr7 (9-51)||(351331-351373)
chr7 (9-51)||(3811744-3811786)
chr7 (9-51)||(35148583-35148625)
chr7 (10-51)||(26383212-26383253)
chr7 (192-246)||(24690848-24690900)
chr7 (150-215)||(18656883-18656948)
chr7 (149-186)||(26383532-26383569)
[»] chr8 (27 HSPs)
chr8 (135-452)||(9935129-9935449)
chr8 (135-452)||(32896860-32897183)
chr8 (135-452)||(32890736-32891059)
chr8 (149-452)||(14417804-14418108)
chr8 (135-452)||(5542149-5542472)
chr8 (138-452)||(42992992-42993309)
chr8 (149-452)||(36818835-36819141)
chr8 (135-452)||(10705685-10706014)
chr8 (135-384)||(10699877-10700127)
chr8 (135-451)||(22219706-22220039)
chr8 (149-436)||(39735558-39735844)
chr8 (255-452)||(7771202-7771402)
chr8 (149-452)||(39727306-39727604)
chr8 (296-452)||(14799405-14799564)
chr8 (261-452)||(1882740-1882939)
chr8 (149-225)||(42033664-42033740)
chr8 (150-225)||(1883039-1883114)
chr8 (354-453)||(24250171-24250273)
chr8 (377-452)||(1171414-1171492)
chr8 (9-51)||(14417505-14417547)
chr8 (189-355)||(1171249-1171414)
chr8 (9-51)||(5542735-5542777)
chr8 (9-51)||(22220300-22220342)
chr8 (9-49)||(10705382-10705422)
chr8 (9-48)||(32896555-32896594)
chr8 (403-448)||(39689782-39689828)
chr8 (9-51)||(39727858-39727902)
[»] chr5 (33 HSPs)
chr5 (149-452)||(12686168-12686475)
chr5 (149-452)||(12692270-12692577)
chr5 (149-452)||(28525375-28525682)
chr5 (149-452)||(7389537-7389843)
chr5 (149-452)||(28531471-28531778)
chr5 (135-452)||(41297127-41297447)
chr5 (150-452)||(30384365-30384681)
chr5 (149-452)||(30772145-30772454)
chr5 (135-302)||(32094364-32094533)
chr5 (135-302)||(32097165-32097334)
chr5 (287-449)||(24054335-24054502)
chr5 (149-452)||(19066096-19066408)
chr5 (264-452)||(32094148-32094340)
chr5 (135-379)||(20499986-20500231)
chr5 (286-452)||(32096949-32097119)
chr5 (149-452)||(19059753-19060067)
chr5 (310-452)||(16215163-16215309)
chr5 (321-453)||(14610184-14610322)
chr5 (154-258)||(14610037-14610141)
chr5 (160-436)||(26509722-26510000)
chr5 (317-384)||(28542269-28542336)
chr5 (315-436)||(26316798-26316922)
chr5 (320-378)||(37896365-37896423)
chr5 (9-51)||(28525959-28526001)
chr5 (9-51)||(32094796-32094838)
chr5 (9-51)||(41296823-41296865)
chr5 (397-452)||(8706454-8706510)
chr5 (192-335)||(8706532-8706672)
chr5 (9-51)||(12686763-12686805)
chr5 (9-51)||(30771825-30771867)
chr5 (149-213)||(26318492-26318555)
chr5 (9-51)||(19060348-19060389)
chr5 (9-51)||(26509401-26509443)
[»] scaffold0363 (2 HSPs)
scaffold0363 (149-452)||(611-915)
scaffold0363 (9-51)||(1172-1214)
[»] scaffold0012 (1 HSPs)
scaffold0012 (149-453)||(172878-173186)
[»] scaffold0440 (1 HSPs)
scaffold0440 (149-452)||(1182-1490)
[»] scaffold0208 (3 HSPs)
scaffold0208 (135-452)||(6370-6693)
scaffold0208 (135-452)||(12243-12566)
scaffold0208 (9-51)||(11928-11970)
[»] scaffold0236 (1 HSPs)
scaffold0236 (216-452)||(5465-5705)
[»] scaffold1114 (1 HSPs)
scaffold1114 (152-452)||(950-1255)
[»] scaffold0085 (2 HSPs)
scaffold0085 (290-394)||(38434-38536)
scaffold0085 (148-206)||(38289-38347)
[»] scaffold0185 (2 HSPs)
scaffold0185 (307-421)||(5945-6061)
scaffold0185 (167-230)||(5826-5889)
[»] scaffold0064 (1 HSPs)
scaffold0064 (9-51)||(13816-13858)


Alignment Details
Target: chr6 (Bit Score: 251; Significance: 1e-139; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 135 - 452
Target Start/End: Complemental strand, 8651115 - 8650792
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8651115 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 8651016  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||||| |||||||||||||||||||||||| | ||||||    |||||||||||||||||||||||||||||||||||||||||||||    
T  8651015 tgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgccttgaaagctttatccaggtattcctaataccctaattcttaatatc 8650916  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaat 429  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||    
T  8650915 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaat 8650816  T
Q  430 ctgttt-tattaagacctaaattt 452  Q
    |||||| |||||||| ||||||||    
T  8650815 ctgtttatattaagagctaaattt 8650792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 135 - 452
Target Start/End: Complemental strand, 4580633 - 4580310
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4580633 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 4580534  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
    ||||||||||||||||| |||||||||||||||||||||||| | |||| | |||  |||||||||||||||||||||||||||||||||||||||||||    
T  4580533 cgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggttgttacaaaagctttatccaggtattcctaataccctaattcttaatatc 4580434  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaat 429  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||| ||||||||||||| |||||||||    
T  4580433 cttggtaaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcatagttgttgaacatgtattatgaaat 4580334  T
Q  430 ctgttt-tattaagacctaaattt 452  Q
    |||||| |||||||||||||||||    
T  4580333 ctgtttatattaagacctaaattt 4580310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 135 - 452
Target Start/End: Original strand, 25354059 - 25354382
Alignment:
Q  135 cgtacacggcaatactct--cttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    |||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25354059 cgtacacgacaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 25354158  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||||| |||||||||||||||||||||||| | ||||||  ||  ||||||||||||||||||||||||||||||||||||||||||     
T  25354159 tgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgctacaaaagctttatccaggtattcctaataccctaattcttaatat- 25354257  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaat 429  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||   ||| |  |||||||||||||| |||||||||    
T  25354258 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgctttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaat 25354357  T
Q  430 ctgtttt--attaagacctaaattt 452  Q
    |||||||  ||||||| ||||||||    
T  25354358 ctgtttttaattaagatctaaattt 25354382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 137 - 452
Target Start/End: Complemental strand, 21191179 - 21190855
Alignment:
Q  137 tacacggcaatactctct--tctccccatctgaagagaacttga---ggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctatt 231  Q
    ||||||||||||||||||  ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21191179 tacacggcaatactctctcttctccccatctgaagagaacttgatgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctatt 21191080  T
Q  232 gcgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatat 331  Q
    | |||||||| ||||||| |||||||||||||||||||||||| | ||||||    ||||||||||||||||||||| ||||||||||||||||||||||    
T  21191079 gtgtgtttcatatcatctcctctctttggttatcgttgttgatgagagggctgccttgaaagctttatccaggtatttctaataccctaattcttaatat 21190980  T
Q  332 ccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaa 428  Q
    | ||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||||| ||||||||||    
T  21190979 ctttgataaatcaaatatatcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatattttatgaaa 21190880  T
Q  429 tctgttt-tattaagacctaaattt 452  Q
    ||||||| || ||||||||||||||    
T  21190879 tctgtttataataagacctaaattt 21190855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 135 - 398
Target Start/End: Original strand, 25343472 - 25343736
Alignment:
Q  135 cgtacacggcaatactct--cttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    |||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25343472 cgtacacgacaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 25343571  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||||| |||||||||||||||||||||||| ||||||||  ||  ||||||||||| ||||||||||||||| ||||||||||||||     
T  25343572 tgtgtttcagatcatctcctctctttggttatcgttgttgatgaaagggctgctacaaaagctttatctaggtattcctaatactctaattcttaatat- 25343670  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta 398  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  25343671 cttgataaatcaaaaatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttctgcta 25343736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 149 - 452
Target Start/End: Complemental strand, 31756516 - 31756202
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctat--tgcgtgtttcagatca 246  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||  || |||||||||||||    
T  31756516 ctctcttctccccatctgaagagaacttgaggtataaaggtacctgttgaggaagaaccaaatcagccgccgctaaccctatattgtgtgtttcagatca 31756417  T
Q  247 tc---ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatc 343  Q
    ||   | |||||| ||  ||| |||| || | | |||||| | ||||||||| ||||||| ||||| |||||||||||||||||||||||||||||| ||    
T  31756416 tcacctcctctctctgtgtatggttgctgttgagagggctgtcatgaaagctctatccagatattcataataccctaattcttaatatccttgataattc 31756317  T
Q  344 aaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctg---tttta 437  Q
    |||||||||||||||||||| ||||||||||||||||||||  ||||||||| |    ||||||||||||||||||||||||||||||||||   |||||    
T  31756316 aaacatgtcgtagatccgattataatcatgttcaatgttttatttgcttccgttgttgattcataattgttgaacatgttttatgaaatctgttttttta 31756217  T
Q  438 ttaagacctaaattt 452  Q
    |||||||||||||||    
T  31756216 ttaagacctaaattt 31756202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 243 - 452
Target Start/End: Complemental strand, 32035488 - 32035275
Alignment:
Q  243 atcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaat 342  Q
    ||||||| |||||||||||||||||||||||| | ||||||    |||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  32035488 atcatctcctctctttggttatcgttgttgatgagagggctgccttgaaaggtttatccaggtattcctaataccctaattcttaataaccttgataaat 32035389  T
Q  343 caaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttt-tat 438  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||||||||||||||||||||||| |||    
T  32035388 caaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttatat 32035289  T
Q  439 taagacctaaattt 452  Q
    ||||||||||||||    
T  32035288 taagacctaaattt 32035275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 257 - 452
Target Start/End: Complemental strand, 21782941 - 21782742
Alignment:
Q  257 ttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtag 356  Q
    |||||||||||||||||| | ||||||    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21782941 ttggttatcgttgttgatgagagggctgccttgaaagctttatccagctattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtag 21782842  T
Q  357 atccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttt-tattaagacctaaattt 452  Q
    ||||||||||||||||||||||||||||| ||||||||||||   ||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  21782841 atccgatcataatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgtattatgaaatctgtttatattaagacctaaattt 21782742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 304 - 452
Target Start/End: Complemental strand, 8662922 - 8662770
Alignment:
Q  304 gtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---at 400  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||    
T  8662922 gtattcctaatagcctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgat 8662823  T
Q  401 tcataattgttgaacatgttttatgaaatctgttt-tattaagacctaaattt 452  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  8662822 tcataattgttgaacatgttttatgaaatctgtttatattaagagctaaattt 8662770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 149 - 452
Target Start/End: Original strand, 17581496 - 17581796
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctat-tgcgtgtttcagatcat 247  Q
    |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| ||| |||||  |   ||  || |||||||||     
T  17581496 ctctcttctccccatctgaagagaacttgaggcataaatgtacaagttgaggaagaaccaaatcagctgccactaaccgttgatgtttgcttcagatcac 17581595  T
Q  248 cttctctctt-tggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaa 346  Q
    || ||||||  | ||  | ||||||| | | |||||| | ||||||||||||||||||||||||||||||||||||||||         | |||||||||    
T  17581596 ctcctctctccttgtcgttgttgttgttgagagggctgtcatgaaagctttatccaggtattcctaataccctaattctt---------ggtaaatcaaa 17581686  T
Q  347 catgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctg-ttttattaag 442  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||||||||   ||||||||| ||||||||||||||||||| | || ||||||| ||    
T  17581687 catgtcgtagatcctataataatcatgttcaatgttttgtttgcttccgctatcgattcataatagttgaacatgttttatgaattatgtttttatttag 17581786  T
Q  443 acctaaattt 452  Q
    | ||||||||    
T  17581787 atctaaattt 17581796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 290 - 452
Target Start/End: Complemental strand, 21197174 - 21197010
Alignment:
Q  290 aaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttg 389  Q
    |||| ||||||||||||||| ||||||  |||||||| |||||||||||||||||||||||| ||||||||| ||||| | ||||||||||||||| |||    
T  21197174 aaagatttatccaggtattcataatac--taattcttgatatccttgataaatcaaacatgttgtagatccgttcatacttatgttcaatgttttgtttg 21197077  T
Q  390 cttccgcta---attcataattgttgaacatgttttatgaaatctg-ttttattaagacctaaattt 452  Q
    |||||||||   ||||||||| |||||||||||||||||||||||| ||||| || |||||||||||    
T  21197076 cttccgctattgattcataatcgttgaacatgttttatgaaatctgtttttactatgacctaaattt 21197010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 287 - 452
Target Start/End: Original strand, 18778584 - 18778754
Alignment:
Q  287 atgaaagctttatccaggtattcctaataccc-taattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttg 385  Q
    ||||||| ||||||||||||||||||| |||| |||||||||||||  ||||||||||||| | |||||||||||||||||||| |||||||| ||||||    
T  18778584 atgaaagttttatccaggtattcctaaaacccctaattcttaatata-ttgataaatcaaatacgtcgtagatccgatcataattatgttcaacgttttg 18778682  T
Q  386 gttgcttccgcta---attcataattgttgaacatg-ttttatgaaatctgtttt-attaagacctaaattt 452  Q
     ||||||||||||   |||||||||| ||||||||| ||||||||||| |||||| ||||||||||||||||    
T  18778683 tttgcttccgctattgattcataattattgaacatgtttttatgaaatttgttttaattaagacctaaattt 18778754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 290 - 453
Target Start/End: Complemental strand, 21770711 - 21770545
Alignment:
Q  290 aaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttg 389  Q
    |||||||||| ||| ||||||||||||  |||||||| |||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||| ||     
T  21770711 aaagctttattcagatattcctaatac--taattcttgatatccttgataaatcaaacatgtcgtagatccgttcatatttatgttcaatgttttgttta 21770614  T
Q  390 cttccgc---taattcataattgttgaacatgttttatgaaatctgtttt--attaagacctaaatttt 453  Q
    ||||| |   ||||| |  |||||||| ||||| ||||||||||||||||  |||||||||||||||||    
T  21770613 cttcctctattaatttacgattgttgatcatgtattatgaaatctgtttttaattaagacctaaatttt 21770545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 290 - 398
Target Start/End: Complemental strand, 21783462 - 21783356
Alignment:
Q  290 aaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttg 389  Q
    |||||||||| ||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||| |||    
T  21783462 aaagctttattcaggtattcctaatac--taattcttgatatccttgataaatcaaacatgtcgtagatccgttcatatttatgttcaatgttttgtttg 21783365  T
Q  390 cttccgcta 398  Q
    |||||||||    
T  21783364 cttccgcta 21783356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 290 - 398
Target Start/End: Complemental strand, 21789685 - 21789579
Alignment:
Q  290 aaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttg 389  Q
    |||||||||| ||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||| |||    
T  21789685 aaagctttattcaggtattcctaatac--taattcttgatatccttgataaatcaaacatgtcgtagatccgttcatatttatgttcaatgttttgtttg 21789588  T
Q  390 cttccgcta 398  Q
    |||||||||    
T  21789587 cttccgcta 21789579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 21197326 - 21197250
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac 225  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21197326 ctctcttctccccatctgaagagaacttgaggcataaagataccggttgaggaagaaccaaatcagccgccgctaac 21197250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 21770877 - 21770787
Alignment:
Q  135 cgtacacggcaatactctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac 225  Q
    |||||||||||| |||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21770877 cgtacacggcaaaactctctcttctccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgctgctaac 21770787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 34603457 - 34603336
Alignment:
Q  318 ctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaa 414  Q
    |||||| |||||||||||||||||||||||||| | |||||||||||||||| |||||||||| |||| |||||| |||||   |||||||||||||  |    
T  34603457 ctaattgttaatatccttgataaatcaaacatgccatagatccgatcataattatgttcaatgctttgtttgctt-cgctatttattcataattgttaca 34603359  T
Q  415 catgttttatgaaatctgtttta 437  Q
    |||||||||| |||| |||||||    
T  34603358 catgttttattaaatatgtttta 34603336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 34724734 - 34724613
Alignment:
Q  318 ctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaa 414  Q
    |||||| |||||||||||||||||||||||||| | |||||||||||||||| |||||||||| |||| |||||| |||||   |||||||||||||  |    
T  34724734 ctaattgttaatatccttgataaatcaaacatgccatagatccgatcataattatgttcaatgctttgtttgctt-cgctatttattcataattgttaca 34724636  T
Q  415 catgttttatgaaatctgtttta 437  Q
    |||||||||| |||| |||||||    
T  34724635 catgttttattaaatatgtttta 34724613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 6097999 - 6098153
Alignment:
Q  304 gtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta----a 399  Q
    ||||||||||||||||||||||||| || |||||||||||||||| |||||||||||| ||    |||||||||||||||||  | |||||||||    |    
T  6097999 gtattcctaataccctaattcttaacat-cttgataaatcaaacacgtcgtagatccgttc---ttcatgttcaatgttttgtctacttccgctatttga 6098094  T
Q  400 ttcataa---ttgttgaacatgttttatgaaatctg--ttttattaagacctaaatttt 453  Q
    |||||||   ||||||||||||||||||||||| ||  |||||||||||||||| ||||    
T  6098095 ttcataattgttgttgaacatgttttatgaaatttgttttttattaagacctaagtttt 6098153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 135 - 218
Target Start/End: Complemental strand, 21783636 - 21783545
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggta------ccggttgaggaagaaccaaatcagccgc 218  Q
    |||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||    
T  21783636 cgtacacggcaaaactctctcttctccccatctgaagagaacttgaggcataaaggtaaaggtgccggttgaggaagaaccaaatcagccgc 21783545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 135 - 218
Target Start/End: Complemental strand, 21789859 - 21789768
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggta------ccggttgaggaagaaccaaatcagccgc 218  Q
    |||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||    
T  21789859 cgtacacggcaaaactctctcttctccccatctgaagagaacttgaggcataaaggtaaaggtgccggttgaggaagaaccaaatcagccgc 21789768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 8651419 - 8651377
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8651419 attattaagatatgtagcccaagtgggagattgttggaatatt 8651377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 17581147 - 17581189
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  17581147 attattaagatatgtagcccaagtgggagattgttggaatatt 17581189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 32030082 - 32030040
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  32030082 attattaagatatgtagcccaagtgggagattgttggaatatt 32030040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 21191486 - 21191444
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  21191486 attattaagatatgtagcccaagtggaagattgttggaatatt 21191444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 21771180 - 21771138
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  21771180 attattaagatatgtagcccaagtgagagattgttggaatatt 21771138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 366
Target Start/End: Original strand, 1106229 - 1106294
Alignment:
Q  302 aggtattcctaataccct-aattcttaatatccttgataaatcaaacatgtcgtagatccgatcat 366  Q
    |||||||||||||||| | |||| ||||||| |||||| |||||||||||| ||||||||||||||    
T  1106229 aggtattcctaataccttgaattattaatattcttgatgaatcaaacatgttgtagatccgatcat 1106294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 20745431 - 20745497
Alignment:
Q  160 ccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaact 226  Q
    |||||||||||||||||| ||| |||| |||||| |||||||| |||||||| || | |||||||||    
T  20745431 ccatctgaagagaacttggggcttaaaagtaccgattgaggaaaaaccaaattagtcaccgctaact 20745497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 30905877 - 30905821
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaac 206  Q
    |||||||| |||||||||||||||||||||||||||||  ||||  ||||||||||||    
T  30905877 ctctcttc-ccccatctgaagagaacttgaggcataaatataccaattgaggaagaac 30905821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 13007218 - 13007252
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgtt 43  Q
    ||||||||||||||||||||||||| |||||||||    
T  13007218 attattaagatatgtagcccaagtgagagattgtt 13007252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 251; Significance: 1e-139; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 135 - 452
Target Start/End: Original strand, 36750262 - 36750585
Alignment:
Q  135 cgtacacggcaatactct--cttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    |||||||| |||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  36750262 cgtacacgacaatactctctcttctccccatctgaagagaacttgaggcataaagataccggttgaggaagaaccaaatcagccgccgctaactctattg 36750361  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||||| |||||||||||||||||||||||||| ||||||  |||||||| ||||||||||||||||||||||||||||||||||||||    
T  36750362 tgtgtttcagatcatctcctctctttggttatcgttgttgattagagggctgctatgaaagttttatccaggtattcctaataccctaattcttaatatc 36750461  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaat 429  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||    
T  36750462 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaat 36750561  T
Q  430 ctg-ttttattaagacctaaattt 452  Q
    ||| |||||||||||| |||||||    
T  36750562 ctgtttttattaagacttaaattt 36750585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 149 - 452
Target Start/End: Complemental strand, 28683241 - 28682934
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||    
T  28683241 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgctgttaactctattgtgtgtttcagatcatc 28683142  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
      ||||| |||||||||||||||||| | |||| | |  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28683141 cactctccttggttatcgttgttgatgagagggttgtcttgaaagctttatccaggtattcctaataccctaattcttaataaccttgataaatcaaaca 28683042  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttt-tattaagac 444  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||||||||||||||||||||||| |||||||||    
T  28683041 tgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttatattaagac 28682942  T
Q  445 ctaaattt 452  Q
    ||||||||    
T  28682941 ctaaattt 28682934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 135 - 452
Target Start/End: Original strand, 13455947 - 13456270
Alignment:
Q  135 cgtacacggcaatactct--cttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13455947 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccaccgctaactctattg 13456046  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||||| |||||||||||||| ||||||||| | ||||||    ||||||||||||||||||||||||||||||||||||||||||| |    
T  13456047 tgtgtttcagatcatctcctctctttggttatagttgttgatgagagggctgccttgaaagctttatccaggtattcctaataccctaattcttaatacc 13456146  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaat 429  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||   ||||| ||||||||||||||| |||||||||    
T  13456147 cttgataaatcaaacatgtcgtagatccgatcataatcaggttcaatgttttgtttgcttccgctattgattcacaattgttgaacatgtattatgaaat 13456246  T
Q  430 ctgttt-tattaagacctaaattt 452  Q
    || ||| |||||||||||| ||||    
T  13456247 ctatttatattaagacctatattt 13456270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 135 - 452
Target Start/End: Original strand, 13461888 - 13462211
Alignment:
Q  135 cgtacacggcaatactct--cttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13461888 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccaccgctaactctattg 13461987  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||||| |||||||||||||| ||||||||| | ||||||    ||||||||||||||||||||||||||||||||||||||||||| |    
T  13461988 tgtgtttcagatcatctcctctctttggttatagttgttgatgagagggctgccttgaaagctttatccaggtattcctaataccctaattcttaatacc 13462087  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaat 429  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||   ||||| ||||||||||||||| |||||||||    
T  13462088 cttgataaatcaaacatgtcgtagatccgatcataatcaggttcaatgttttgtttgcttccgctattgattcacaattgttgaacatgtattatgaaat 13462187  T
Q  430 ctgttt-tattaagacctaaattt 452  Q
    || ||| |||||||||||| ||||    
T  13462188 ctatttatattaagacctatattt 13462211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 135 - 452
Target Start/End: Complemental strand, 44717117 - 44716793
Alignment:
Q  135 cgtacacggcaatact--ctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44717117 cgtacacggcaatactatctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 44717018  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||||| |||||||||||||||||||||||| | || |||  ||  |||||||||||||||||||||||||||||||||||||||||||    
T  44717017 tgtgtttcagatcatctcctctctttggttatcgttgttgatgagagagctgctacaaaagctttatccaggtattcctaataccctaattcttaatatc 44716918  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt-ggttgcttccgcta---attcataattgttgaacatgttttatgaaa 428  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||   ||| ||||  |||||||||||||||||| |    
T  44716917 cttggtaaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttcttttgcttccgctattgattgataaccgttgaacatgttttatgata 44716818  T
Q  429 tctg-ttttattaagacctaaattt 452  Q
    |||| ||||||||||||||||||||    
T  44716817 tctgtttttattaagacctaaattt 44716793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 149 - 452
Target Start/End: Original strand, 31002240 - 31002548
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||    
T  31002240 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaattagtcgccgctaactctattgtgtgtttcagatcatc 31002339  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    | |||| ||||||||||||||||||| | ||||||  ||  |||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||    
T  31002340 tcctctttttggttatcgttgttgatgagagggctgctacaaaagctttattcaggtattcctaataccctaattcttgatattcttgataaatcaaaca 31002439  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgtttt--attaaga 443  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||   ||| |  |||||||||||||| ||||||||||||||||  |||||||    
T  31002440 tgtcgtagatccgatcataatcatgttcaatattttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgtttttaattaaga 31002539  T
Q  444 cctaaattt 452  Q
    |||||||||    
T  31002540 cctaaattt 31002548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 135 - 452
Target Start/End: Original strand, 30965175 - 30965499
Alignment:
Q  135 cgtacacggcaatactct--cttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    |||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  30965175 cgtacacgacaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaattagtcgccgctaactctattg 30965274  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     ||||||||||||||||  ||||||||||||||||||||||| | ||||||  ||  |||| ||||| |||||||||||||||||||||||||||| ||     
T  30965275 tgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctacaaaagatttatacaggtattcctaataccctaattcttaaaata 30965374  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaat 429  Q
     |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||   ||| || |||||||||||||| |||||||||    
T  30965375 attgataaatcaaacatgtcgtagatccgatcataatcatgttcaatattttgtttgcttccgctattgatttatgattgttgaacatgtattatgaaat 30965474  T
Q  430 ctgtttt--attaagacctaaattt 452  Q
    |||||||  ||||||||||||||||    
T  30965475 ctgtttttaattaagacctaaattt 30965499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 149 - 452
Target Start/End: Original strand, 31008218 - 31008526
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||    
T  31008218 ctctcttctccccatctgaagagaacttgaggcataaaagtaccggttgaggaagaaccaaattagtcgccgctaactctattgtgtgtttcagatcatc 31008317  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    | |||| ||||||||||||||||||| | ||||||  ||  |||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||    
T  31008318 tcctctttttggttatcgttgttgatgagagggctgctacaaaagctttattcaggtattcctaataccctaattcttgatattcttgataaatcaaaca 31008417  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgtttt--attaaga 443  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||   ||| |  |||||||||||||| ||||||||||||||||  |||||||    
T  31008418 tgtcgtagatccgatcataatcatgttcaatattttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgtttttaattaaga 31008517  T
Q  444 cctaaattt 452  Q
    |||||||||    
T  31008518 cctaaattt 31008526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 161 - 452
Target Start/End: Complemental strand, 13149968 - 13149675
Alignment:
Q  161 catctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatcttctctctttgg 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  13149968 catctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctctctttgg 13149869  T
Q  261 ttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatcc 360  Q
    |||||||||||||| | ||||||  ||  |||| ||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13149868 ttatcgttgttgatgagagggctgctacaaaagttttat-caggtattcttaataccctaattcttaatat-cttgataaatcaaacatgtcgtagatcc 13149771  T
Q  361 gatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttt-tattaagacctaaattt 452  Q
    ||||||||||||||||||||||||| ||||||||||||   ||| |  |||||||||||||| ||||||||||||||| |||||||||||||||||    
T  13149770 gatcataatcatgttcaatgttttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgtttatattaagacctaaattt 13149675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 135 - 452
Target Start/End: Complemental strand, 35090964 - 35090638
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctatt- 231  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  35090964 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaaccctattt 35090865  T
Q  232 -------gcgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattc 324  Q
           |  |||||||||||| ||     || || |||| |||| || | | ||||||   |||||||||||||||||||||||||||||| ||||||     
T  35090864 atttattgtttgtttcagatcacct-----ctctgtttattgttgatgctgagagggctgccatgaaagctttatccaggtattcctaatacactaattg 35090770  T
Q  325 ttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttt 421  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||||    
T  35090769 ttaatattcttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttt 35090670  T
Q  422 tatgaaatctgttt-tattaagacctaaattt 452  Q
    |||||||||||||| |||||||||||||||||    
T  35090669 tatgaaatctgtttatattaagacctaaattt 35090638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 135 - 452
Target Start/End: Complemental strand, 35084991 - 35084665
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctatt- 231  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  35084991 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaaccctattt 35084892  T
Q  232 -------gcgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattc 324  Q
           |  |||||||||||| ||     || || |||| |||| || | | ||||||   |||||||||||||||||||||||||||||| ||||||     
T  35084891 atttattgtttgtttcagatcacct-----ctctgtttattgttgatgctgagagggctgccatgaaagctttatccaggtattcctaatacactaattg 35084797  T
Q  325 ttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttt 421  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||   |||||||||||||||||||||||    
T  35084796 ttaatattcttgataaatcaaacatgtcgtagatccgatcataatcattttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttt 35084697  T
Q  422 tatgaaatctgttt-tattaagacctaaattt 452  Q
    |||||||||||||| |||||||||||||||||    
T  35084696 tatgaaatctgtttatattaagacctaaattt 35084665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 149 - 452
Target Start/End: Complemental strand, 11048847 - 11048542
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcg---tgtttcagatc 245  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||| ||||| | |||     |||||||||||    
T  11048847 ctctcttctccccatctgaagagaacttgaggcataaaggtaccagttgaggaagaaccaaattagtcgccg-taactgtgttgatatttgtttcagatc 11048749  T
Q  246 atcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaa 345  Q
    | ||||||||||     || |||||||   | |||||| | || ||||||||||||| ||||||||| | ||||||||||||||||||||| || |||||    
T  11048748 accttctctcttg----attgttgttgtcgagagggctgtcataaaagctttatccaagtattcctagtgccctaattcttaatatccttggtacatcaa 11048653  T
Q  346 acatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatct-gttttattaa 441  Q
    ||||| |||| |||| |||||||||||||||||||||||| ||||||| ||||   |||||||||||||| |||||||||||||||| |  ||||| |||    
T  11048652 acatgacgtatatccaatcataatcatgttcaatgttttgtttgcttcagctattgattcataattgttggacatgttttatgaaatttatttttaataa 11048553  T
Q  442 gacctaaattt 452  Q
    |||||||||||    
T  11048552 gacctaaattt 11048542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 149 - 452
Target Start/End: Complemental strand, 35439001 - 35438699
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctat-tgcgtgtttcagatcat 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |   ||  ||||||||||||     
T  35439001 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaaccgttgatgtttgtttcagatcac 35438902  T
Q  248 cttctctctt----tggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatc 343  Q
    || ||||||     | ||| | |||||||   | | ||||   ||||||||||||| |||||||||||||||||||| ||| || ||         ||||    
T  35438901 ctcctctctccttatcgttgttgttgttgtcgagacggctgccatgaaagctttatacaggtattcctaataccctatttcctagta---------aatc 35438811  T
Q  344 aaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttttatta 440  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||   |||||||| |||||||||||||||||||||| ||||||||||    
T  35438810 aaacatgtcgtagatccgatcataatcatgttcaatgttttatttgcttccgctattgattcataactgttgaacatgttttatgaaatttgttttatta 35438711  T
Q  441 agacctaaattt 452  Q
    || |||||||||    
T  35438710 aggcctaaattt 35438699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 299 - 452
Target Start/End: Original strand, 23343574 - 23343731
Alignment:
Q  299 tccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgc-- 396  Q
    |||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| ||||||||||      
T  23343574 tccatgtattcctaataccccaactcttaatatccttgataaatcaaacatgtcgtagattcgttcatattcatgttcaatgttttgtttgcttccgctg 23343673  T
Q  397 -taattcataattgttgaacatgttttatgaaatctgtt-ttattaagacctaaattt 452  Q
     | |||| |||| ||||||||||||||||||||||| || |||| |||| ||||||||    
T  23343674 ttgattcgtaatcgttgaacatgttttatgaaatctcttcttatcaagatctaaattt 23343731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 23343417 - 23343493
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac 225  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  23343417 ctctcttctccccatctgaagagaacttgaggcataaaggtatcggttgaggaagaaccaaatcagccgctgctaac 23343493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 133 - 223
Target Start/End: Original strand, 19879444 - 19879536
Alignment:
Q  133 atcgtacacggcaatactct--cttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgcta 223  Q
    |||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||    
T  19879444 atcgtacacggcaaaactctctcttctccccatctgaagagaacttgaggcataaaggtaccgattgaagaagaatcaaatcagccgccgcta 19879536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 29034697 - 29034759
Alignment:
Q  162 atctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaa 224  Q
    |||||||||||||||||| |||||||||||| |||||||||||| |||||||||| |||||||    
T  29034697 atctgaagagaacttgagacataaaggtaccagttgaggaagaatcaaatcagccaccgctaa 29034759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 452
Target Start/End: Original strand, 29833222 - 29833378
Alignment:
Q  298 atccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgct 397  Q
    |||||||||||| ||||||| ||||| ||  |||| |||||||||||||||||| || |||||||||||||| ||||||||| ||||  ||| ||||| |    
T  29833222 atccaggtattcttaatacc-taattattgttatc-ttgataaatcaaacatgttgtcgatccgatcataattatgttcaatattttatttgtttccgtt 29833319  T
Q  398 a---attcataattgttgaacatgttttatgaaatctgttt-tattaagacctaaattt 452  Q
    |   ||||| |||| || ||||||| ||||||||||| ||| |||| | ||||||||||    
T  29833320 attgattcacaattattaaacatgtattatgaaatctctttatatttatacctaaattt 29833378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 28683560 - 28683518
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  28683560 attattaagatatgtagcccaagtgggagattgttggaatatt 28683518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 35439986 - 35439944
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  35439986 attattaagatatgtagcccaagtgggagattgttggaatatt 35439944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 29833079 - 29833142
Alignment:
Q  163 tctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaa-tcagccgccgctaac 225  Q
    |||||||||||||||| | ||||| ||| ||||||||||||||||||| | |||||||||||||    
T  29833079 tctgaagagaacttgaaggataaatgtatcggttgaggaagaaccaaatttagccgccgctaac 29833142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 35085296 - 35085257
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaat 48  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  35085296 attattaagatatgtaacccaagtgggagattgttggaat 35085257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 13461583 - 13461625
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  13461583 attattaagatatgtagcccaagtaggagattgttagaatatt 13461625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 272
Target Start/End: Original strand, 28765461 - 28765567
Alignment:
Q  166 gaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatcttctctctttggttatc 265  Q
    |||||||| ||||||||| ||||||||  |||||||||||||||||||  | || |||||  |  ||  ||||||||||||||||| || |||| |||||    
T  28765461 gaagagaatttgaggcatcaaggtacctattgaggaagaaccaaatcaatctcctctaaccttggtgtttgtttcagatcatcttcactatttgtttatc 28765560  T
Q  266 gttgttg 272  Q
     ||||||    
T  28765561 attgttg 28765567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 384
Target Start/End: Original strand, 31651664 - 31651703
Alignment:
Q  345 aacatgtcgtagatccgatcataatcatgttcaatgtttt 384  Q
    |||||||| || ||||||||||||||||||||||||||||    
T  31651664 aacatgtcataaatccgatcataatcatgttcaatgtttt 31651703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 250; Significance: 1e-139; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 135 - 452
Target Start/End: Original strand, 24287834 - 24288155
Alignment:
Q  135 cgtacacggcaatactct--cttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24287834 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 24287933  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||||| |||||||||||||||||||||||||| ||||||  |||||||| |||||||||||||||||||||||||||||||||||| |    
T  24287934 tgtgtttcagatcatctcctctctttggttatcgttgttgattagagggctgctatgaaagttttatccaggtattcctaataccctaattcttaataac 24288033  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaat 429  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||    
T  24288034 cttgataaatcaaacatgtcgtagatacgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaat 24288133  T
Q  430 ctgttttattaagacctaaattt 452  Q
    ||  |||||||||||||||||||    
T  24288134 ct-atttattaagacctaaattt 24288155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 135 - 452
Target Start/End: Complemental strand, 6257517 - 6257194
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6257517 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 6257418  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||||| ||| |||||||||||||||||||| | ||||||  || ||||||||||||||||||||||||||| |||||||||||| |||    
T  6257417 tgtgtttcagatcatctcctcactttggttatcgttgttgatgagagggctgctacgaaagctttatccaggtattcctaatatcctaattcttaacatc 6257318  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgc---taattcataattgttgaacatgttttatgaaat 429  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||   | ||| || |||||||||||||| |||||||||    
T  6257317 cttgataaatcaaacatgttgtagatccgatcataatcatgttcaatgttttgtttgcttccgctgttgatttatgattgttgaacatgtattatgaaat 6257218  T
Q  430 ctgttt-tattaagacctaaattt 452  Q
    || ||| |||||||||||||||||    
T  6257217 ctatttatattaagacctaaattt 6257194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 149 - 435
Target Start/End: Complemental strand, 10739635 - 10739346
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  10739635 ctctcttctccccatctgaagagaatttgaggcataaaggtatcggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcaaatcatc 10739536  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    | |||||||||||||||||||||||| | ||||||    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10739535 tcctctctttggttatcgttgttgatgagagggctgccttgaaaggtttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 10739436  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttt 435  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||   |||||||||||||||||||||||||||||||||||||    
T  10739435 tgtcgtagatccgatcataatcatgttcaatgttttgtttgcttctgctattgattcataattgttgaacatgttttatgaaatctgttt 10739346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 149 - 435
Target Start/End: Complemental strand, 10953404 - 10953115
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  10953404 ctctcttctccccatctgaagagaatttgaggcataaaggtatcggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcaaatcatc 10953305  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    | |||||||||||||||||||||||| | ||||||    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10953304 tcctctctttggttatcgttgttgatgagagggctgccttgaaaggtttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 10953205  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttt 435  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||   |||||||||||||||||||||||||||||||||||||    
T  10953204 tgtcgtagatccgatcataatcatgttcaatgttttgtttgcttctgctattgattcataattgttgaacatgttttatgaaatctgttt 10953115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 150 - 452
Target Start/End: Complemental strand, 33458562 - 33458255
Alignment:
Q  150 tctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatct 249  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33458562 tctcttctccccatctgaagagaacttgaggcataaaggtatcggttgagaaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatct 33458463  T
Q  250 tctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacat 349  Q
      ||||||||||||||||||||||| | ||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33458462 catctctttggttatcgttgttgatgagagggctgctaagaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacat 33458363  T
Q  350 gtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgtttt--attaagac 444  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||   ||| |  |||||||||||| | ||||||||||||||||  ||||||||    
T  33458362 gtcgtagatccgatcataatcatgttcaatattttgtttgcttccgctattgatttacgattgttgaacatatattatgaaatctgtttttaattaagac 33458263  T
Q  445 ctaaattt 452  Q
    ||||||||    
T  33458262 ctaaattt 33458255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 135 - 452
Target Start/End: Original strand, 48160807 - 48161126
Alignment:
Q  135 cgtacacggcaatactct--cttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||    
T  48160807 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtactggttgaggaagaaccaaattagtcgccgctaactctattg 48160906  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||||| |||||||||||||||||||||||| | |||||| |||  |||||||||| |||||||||||||||||||||||||||||||     
T  48160907 tgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgttacaaaagctttattcaggtattcctaataccctaattcttaatat- 48161005  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgctaattcataattgttgaacatgttttatgaaatct- 431  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |   | || ||||||||| |||||||||||||     
T  48161006 cttgataaatcaaacatgtcgtagatccgatcataattatgttcaatgttttgtttgcttccgctattgattcatagttgaacatattttatgaaatcta 48161105  T
Q  432 gttttattaagacctaaattt 452  Q
     ||||||||||||||||||||    
T  48161106 tttttattaagacctaaattt 48161126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 135 - 452
Target Start/End: Original strand, 48167026 - 48167345
Alignment:
Q  135 cgtacacggcaatactct--cttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||    
T  48167026 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtactggttgaggaagaaccaaattagtcgccgctaactctattg 48167125  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||||| |||||||||||||||||||||||| | |||||| |||  |||||||||| |||||||||||||||||||||||||||||||     
T  48167126 tgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgttacaaaagctttattcaggtattcctaataccctaattcttaatat- 48167224  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgctaattcataattgttgaacatgttttatgaaatct- 431  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |   | || ||||||||| |||||||||||||     
T  48167225 cttgataaatcaaacatgtcgtagatccgatcataattatgttcaatgttttgtttgcttccgctattgattcatagttgaacatattttatgaaatcta 48167324  T
Q  432 gttttattaagacctaaattt 452  Q
     ||||||||||||||||||||    
T  48167325 tttttattaagacctaaattt 48167345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 184 - 435
Target Start/End: Complemental strand, 10733507 - 10733253
Alignment:
Q  184 aaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggct 283  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||| |||||||||||||||||||||||| | ||||||    
T  10733507 aaaggtatcggttgaggaagaaccaaatcagccgtcgctaactctattgtgtgtttcaaatcatctcctctctttggttatcgttgttgatgagagggct 10733408  T
Q  284 cttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttt 383  Q
        |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10733407 gccttgaaaggtttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttt 10733308  T
Q  384 tggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttt 435  Q
    |  ||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  10733307 tatttgcttccgctattgattcataattgttgaacatgttttatgaaatctgttt 10733253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 184 - 435
Target Start/End: Complemental strand, 10947276 - 10947022
Alignment:
Q  184 aaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggct 283  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||| |||||||||||||||||||||||| | ||||||    
T  10947276 aaaggtatcggttgaggaagaaccaaatcagccgtcgctaactctattgtgtgtttcaaatcatctcctctctttggttatcgttgttgatgagagggct 10947177  T
Q  284 cttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttt 383  Q
        |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10947176 gccttgaaaggtttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttt 10947077  T
Q  384 tggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttt 435  Q
    |  ||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  10947076 tatttgcttccgctattgattcataattgttgaacatgttttatgaaatctgttt 10947022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 149 - 394
Target Start/End: Complemental strand, 33461688 - 33461444
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  33461688 ctctcttctccccatctgaaaagaacttgaggcataaaggtaccggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatc 33461589  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    |  |||||||| |||||||||||||| | ||||||  |   |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  33461588 tcatctctttgattatcgttgttgatgagagggctgctgcaaaagctttatccagatattcctaataccctaattcttaatat-cttgataaatcaaaca 33461490  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttcc 394  Q
    ||||||| |||||| |||||||||||||||||||||| ||||||||    
T  33461489 tgtcgtaaatccgaccataatcatgttcaatgttttgtttgcttcc 33461444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 149 - 452
Target Start/End: Original strand, 49976450 - 49976757
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactcta---ttgcgtgtttcagatc 245  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||    ||| |||||| |||||    
T  49976450 ctctcttctccccatctgaagagaacttgaggcataaag-taccg-ttgaggaagaaccaaatcagccgccgctaacccttattttgtgtgtttgagatc 49976547  T
Q  246 atc---ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaat 342  Q
    |||   | ||||||||| |||||||||||| | | |||  | |||| ||||||| |||  |||||||||||||| |||||| |||   ||||||||||||    
T  49976548 atcacctcctctctttgtttatcgttgttgttgagaggagtgttatcaaagcttcatct-ggtattcctaatactctaattatta---tccttgataaat 49976643  T
Q  343 caaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctg-ttttat 438  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||| |||||   |||||||||||||||| |||||||||||||| || ||||||    
T  49976644 caaacatgtcgtagatccgatcataatcatattcaatgttttgtttgctttcgctatcgattcataattgttgaatatgttttatgaaatttgtttttat 49976743  T
Q  439 taagacctaaattt 452  Q
    ||| | ||||||||    
T  49976744 taaaatctaaattt 49976757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 149 - 452
Target Start/End: Original strand, 50168458 - 50168763
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactcta-ttgcgtgtttcagatcat 247  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||  ||  |||  ||||||||||||     
T  50168458 ctcttttctctccatctgaagagaacttgaggcataaaggtaccg-ttgaggaagaactaaatcaaccgccgctaatccttgttgtttgtttcagatcac 50168556  T
Q  248 cttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaac 347  Q
     | |||||| || || | ||||||| || |  ||||   |||||||| | | |||||||||||| ||||| ||||| ||||||| |||||||||||||||    
T  50168557 atcctctctctgattgttgttgttg-ttgagtggctgccatgaaagcctcaaccaggtattccttatacc-taattgttaatattcttgataaatcaaac 50168654  T
Q  348 atgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatct-gttttattaaga 443  Q
    |||||||| || |||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  50168655 atgtcgtatattcgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacgtgttttatgtaatctggttttattaaga 50168754  T
Q  444 cctaaattt 452  Q
    |||||||||    
T  50168755 cctaaattt 50168763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 149 - 398
Target Start/End: Complemental strand, 44831915 - 44831659
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctatt--gcgtgtttcagatca 246  Q
    ||||||||||| |||| |||||||||||||||||||||  |||||||||||||||||||| |||||||| ||||||| |||||  | |||||||||||||    
T  44831915 ctctcttctccgcatccgaagagaacttgaggcataaaaataccggttgaggaagaaccacatcagccgtcgctaaccctattttgtgtgtttcagatca 44831816  T
Q  247 tct-----tctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaa 341  Q
    ||      ||||||| || |||||||||||| | | |||| | |||| ||||||| ||| |||||||| |||||||||| ||||||||||||||||||||    
T  44831815 tcaccttctctctctctgtttatcgttgttgttgagagggttgttatcaaagcttcatctaggtattcttaataccctagttcttaatatccttgataaa 44831716  T
Q  342 tcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta 398  Q
    | ||||||||||||||| |||||||| |||||||||||| ||   ||||||||||||    
T  44831715 ttaaacatgtcgtagattcgatcatattcatgttcaatgattaatttgcttccgcta 44831659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 290 - 452
Target Start/End: Complemental strand, 26963494 - 26963330
Alignment:
Q  290 aaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttg 389  Q
    |||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||| |||    
T  26963494 aaagctttatccaggtattcctaatac--taattcttgatatccttgataaatcaaacatgtcgtagatccgttcatacttatgttcaatgttttgtttg 26963397  T
Q  390 cttccgcta---attcataattgttgaacatgttttatgaaatctg-ttttattaagacctaaattt 452  Q
    |||||||||   ||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  26963396 cttccgctattgattcataatcgttgaacatgttttatgaaatttgtttttattaagacctaaattt 26963330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 149 - 283
Target Start/End: Complemental strand, 10733648 - 10733514
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||    
T  10733648 ctctcttctccccatctgaagagaatttgaggcataaaggtatcggttgaggaagaaccaaatcagccgtcgctaactctattgtgtgtttcaaatcatc 10733549  T
Q  249 ttctctctttggttatcgttgttgattaaagggct 283  Q
    | |||||||||||||||||||||||| | ||||||    
T  10733548 tcctctctttggttatcgttgttgatgagagggct 10733514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 149 - 283
Target Start/End: Complemental strand, 10947417 - 10947283
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||    
T  10947417 ctctcttctccccatctgaagagaatttgaggcataaaggtatcggttgaggaagaaccaaatcagccgtcgctaactctattgtgtgtttcaaatcatc 10947318  T
Q  249 ttctctctttggttatcgttgttgattaaagggct 283  Q
    | |||||||||||||||||||||||| | ||||||    
T  10947317 tcctctctttggttatcgttgttgatgagagggct 10947283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 150 - 377
Target Start/End: Original strand, 4632246 - 4632482
Alignment:
Q  150 tctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcaga------ 243  Q
    |||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||| | ||  ||||||||||          
T  4632246 tctcttcttctcatctgaagagaacttgaggcataaagataccggttgaggaagaaccaaatcagaagccgctaactatgttttgtgtttcagaattcag 4632345  T
Q  244 -tcatcttctctc---tttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgata 339  Q
     |||||   ||||   |||| |||| ||||||| | |||||| | | |||||||||||||||| ||||| || |||||||||||||||||||| ||||||    
T  4632346 atcatcacatctcctatttgtttatggttgttgttgaaagggttgtcatgaaagctttatccaagtatttctgataccctaattcttaatatc-ttgata 4632444  T
Q  340 aatcaaacatgtcgtagatccgatcataatcatgttca 377  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4632445 aatcaaacatgtcgtagatccgatcataatcatgttca 4632482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 149 - 429
Target Start/End: Complemental strand, 19686617 - 19686341
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    ||||||||||| ||||  ||||||| ||||||||||| ||||||||||||| | ||||||||||||| || | ||      ||| |||||||||||||||    
T  19686617 ctctcttctcctcatcccaagagaaattgaggcataatggtaccggttgagaacgaaccaaatcagctgctgata------ttgtgtgtttcagatcatc 19686524  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    ||||||||||||| ||| ||| || | ||| | || | || |||||||| | ||| ||||| |||||||| |||||||||||| |||||| |||||| ||    
T  19686523 ttctctctttggtgatcattgctgttgaaatgtctgtcatcaaagctttgttcag-tattcataatacccgaattcttaatatgcttgattaatcaagca 19686425  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaat 429  Q
    ||| ||||||||||| ||||| | ||||||| ||||| ||||||||| ||   ||| ||| || ||||||||||||||||||||    
T  19686424 tgttgtagatccgatgataattacgttcaatattttgtttgcttccgttattgatttatagttattgaacatgttttatgaaat 19686341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 26957115 - 26957023
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac 225  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26957115 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagtcgccgctaac 26957023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 150 - 392
Target Start/End: Original strand, 3769434 - 3769673
Alignment:
Q  150 tctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac-tctattgcgtgtttcagatcatc 248  Q
    ||||||||||| ||||||| ||||||  |||||||||  ||| ||||||||||||||||||||||||||| ||||| | | ||| || ||||| ||||      
T  3769434 tctcttctccctatctgaaaagaactataggcataaatatacgggttgaggaagaaccaaatcagccgccactaacctatgttgtgtatttcacatcacg 3769533  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
     | |||  |  || ||||||| || | | ||| |    || ||||| | || || |||||||||||||| ||||| |||||||||||||| ||| |||||    
T  3769534 atttcttctctgtgatcgttgctgttgagaggacc---atcaaagcctcattcaagtattcctaatacc-taattattaatatccttgattaatgaaaca 3769629  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgctt 392  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  3769630 tgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 3769673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 345 - 452
Target Start/End: Complemental strand, 26956929 - 26956818
Alignment:
Q  345 aacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctg-ttttatta 440  Q
    ||||||||||||||||| ||||| | ||||||||||||||  ||||||||||||   ||||||||| |||||||||||||||||||||||| ||||||||    
T  26956929 aacatgtcgtagatccgttcatacttatgttcaatgttttatttgcttccgctattgattcataatcgttgaacatgttttatgaaatctgtttttatta 26956830  T
Q  441 agacctaaattt 452  Q
    ||||||||||||    
T  26956829 agacctaaattt 26956818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 368 - 452
Target Start/End: Original strand, 4632869 - 4632957
Alignment:
Q  368 atcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctg-ttttattaagacctaaattt 452  Q
    |||||||||||||||||| |||||||||||    ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4632869 atcatgttcaatgttttgtttgcttccgctgttgattaataattgttgaacatgttttatgaaatctgtttttattaagacctaaattt 4632957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 50427369 - 50427483
Alignment:
Q  287 atgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatc--------aaacatgtcgtagatccgatcataatcatgttcaa 378  Q
    ||||| ||| ||||||||||||||||||||||||||||||||| | |||||||||||        |||||||||||| |||||||||||||||| |||||    
T  50427369 atgaacgctatatccaggtattcctaataccctaattcttaatcttcttgataaatcaataaattaaacatgtcgtacatccgatcataatcat-ttcaa 50427467  T
Q  379 tgttttggttgcttcc 394  Q
    ||||||| ||||||||    
T  50427468 tgttttgattgcttcc 50427483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 155 - 257
Target Start/End: Original strand, 35177666 - 35177770
Alignment:
Q  155 tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactcta--ttgcgtgtttcagatcatcttct 252  Q
    ||||| |||||||||||||||||||||||||| ||| |||||||| || || |||||||| ||||||||||||||  ||| |||||||||||||||  ||    
T  35177666 tctcctcatctgaagagaacttgaggcataaatgtatcggttgagaaataatcaaatcaggcgccgctaactctatgttgtgtgtttcagatcatcacct 35177765  T
Q  253 ctctt 257  Q
    |||||    
T  35177766 ctctt 35177770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 422
Target Start/End: Original strand, 9237402 - 9237502
Alignment:
Q  325 ttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttt 421  Q
    ||||||| ||||||||||||||||||||||| |||||| ||||||||| ||||||||| || |||||||  |||   |||||||||  ||||||||||||    
T  9237402 ttaatatacttgataaatcaaacatgtcgtaaatccgagcataatcatattcaatgttctgtttgcttcgactattcattcataatcattgaacatgttt 9237501  T
Q  422 t 422  Q
    |    
T  9237502 t 9237502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 17627075 - 17627002
Alignment:
Q  150 tctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgcta 223  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||||||||||||| |||  ||||| |||||    
T  17627075 tctcttctccccatctgaagagaactagaagcataaaagtaccggttgaggaagaacaaaactagccgtcgcta 17627002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 32284543 - 32284620
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaact 226  Q
    |||| |||||| |||||||||| |||||||||| ||||||||||| | |||||||||||||||||| |||| ||||||    
T  32284543 ctctattctcctcatctgaagaaaacttgaggcctaaaggtaccgatcgaggaagaaccaaatcagtcgccactaact 32284620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 372 - 452
Target Start/End: Complemental strand, 34308144 - 34308061
Alignment:
Q  372 tgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttttattaagacctaaattt 452  Q
    |||||||| |||||  |||||||||||   |||||||||| ||||||||||||||| ||||||||||||||||||| |||||||    
T  34308144 tgttcaatattttgtatgcttccgctattgattcataattattgaacatgttttataaaatctgttttattaagacgtaaattt 34308061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 10733965 - 10733923
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10733965 attattaagatatgtagcccaagtgggagattgttggaatatt 10733923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 10947734 - 10947692
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10947734 attattaagatatgtagcccaagtgggagattgttggaatatt 10947692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 26957419 - 26957377
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  26957419 attattaagatatgtagcccaagtgggagattgttggaatatt 26957377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 48166722 - 48166764
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  48166722 attattaagatatgtagcccaagtgggagattgttggaatatt 48166764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 50155827 - 50155897
Alignment:
Q  154 ttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaa 224  Q
    |||||| |||||||| ||||||| ||||||||||||||| || ||| ||||| ||||||||||||||||||    
T  50155827 ttctcctcatctgaaaagaacttaaggcataaaggtaccagtcgagaaagaatcaaatcagccgccgctaa 50155897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 50168138 - 50168180
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  50168138 attattaagatatgtagcccaagtgggagattgttggaatatt 50168180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 33045108 - 33045185
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaact 226  Q
    ||||||||||| |   |||||||||||||||  ||||| |||||||||||| |||||| ||||||||||||| |||||    
T  33045108 ctctcttctccgcgattgaagagaacttgagatataaaagtaccggttgagaaagaactaaatcagccgccgttaact 33045185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 50155990 - 50156046
Alignment:
Q  319 taattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgtt 375  Q
    ||||| ||||||| ||||||||||||||||||||||| |||||||| |||| |||||    
T  50155990 taattgttaatattcttgataaatcaaacatgtcgtatatccgatcttaattatgtt 50156046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 452
Target Start/End: Complemental strand, 55473230 - 55473134
Alignment:
Q  357 atccgatcataatcatgttcaatgttttggttgcttccgctaattcataattgttgaacatgttttatgaaatctgttt-tattaagacctaaattt 452  Q
    |||| ||||||||||| |||||| ||||  |||||||||||| |   | ||| |||||||| ||||||||||| ||||| |||||||||||||||||    
T  55473230 atccaatcataatcatattcaatattttatttgcttccgctattgatttattattgaacatattttatgaaatttgtttctattaagacctaaattt 55473134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 26971867 - 26971824
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaactt 176  Q
    ||||||||||||||||||||  ||||||||||||||||||||||    
T  26971867 cgtacacggcaatactctctcttctccccatctgaagagaactt 26971824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 50427238 - 50427281
Alignment:
Q  167 aagagaacttgaggcataaaggtaccggttgaggaagaaccaaa 210  Q
    ||||||| |||||||||||| |||||||||||| ||||||||||    
T  50427238 aagagaagttgaggcataaatgtaccggttgagtaagaaccaaa 50427281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 17627391 - 17627349
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||| || |||||||||||||||||| ||||||    
T  17627391 attattaagatatggagtccaagtgggagattgttgaaatatt 17627349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 384
Target Start/End: Original strand, 28704553 - 28704609
Alignment:
Q  328 atatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 384  Q
    ||||| |||||| ||||||||||| ||||||| ||||||| ||||| ||||| ||||    
T  28704553 atatctttgatacatcaaacatgttgtagatctgatcatattcatgctcaatatttt 28704609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 247; Significance: 1e-137; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 135 - 452
Target Start/End: Complemental strand, 11840037 - 11839714
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11840037 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 11839938  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||||| |||||||||||||||||||||||| | ||||||    |||||||||||||||||||||||||||||||||||||||||||||    
T  11839937 tgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgccttgaaagctttatccaggtattcctaataccctaattcttaatatc 11839838  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaat 429  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||||||| | |||||||    
T  11839837 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtatcatgaaat 11839738  T
Q  430 ctgttt-tattaagacctaaattt 452  Q
    |||||| |||||||||||||||||    
T  11839737 ctgtttatattaagacctaaattt 11839714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 133 - 452
Target Start/End: Complemental strand, 17056106 - 17055781
Alignment:
Q  133 atcgtacacggcaata-ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctatt 231  Q
    ||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17056106 atcgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctatt 17056007  T
Q  232 gcgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatat 331  Q
    | |||||||||||||||| || |||||||||| |||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  17056006 gtgtgtttcagatcatctcctatctttggttaccgttgttgattagagggctgctatgaaagctttatccaggtattcctaataccctaattcttaatat 17055907  T
Q  332 ccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaa 428  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||||| ||||||||||    
T  17055906 ccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatattttatgaaa 17055807  T
Q  429 tctg--ttttattaagacctaaattt 452  Q
     |||  ||||||||||||||||||||    
T  17055806 actgttttttattaagacctaaattt 17055781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 135 - 452
Target Start/End: Complemental strand, 10244646 - 10244323
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10244646 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaatgtaccggttgaggaagaaccaaatcagccgccgctaactctattg 10244547  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||| ||||||| |||||||||||||||||||||||| | |||||| |  |||||||||||||||||||||||||||| ||||||||||||||||    
T  10244546 tgtgtttcatatcatctcctctctttggttatcgttgttgatgagagggctgtcttgaaagctttatccaggtattcctaatagcctaattcttaatatc 10244447  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaat 429  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||    
T  10244446 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaat 10244347  T
Q  430 ctgttt-tattaagacctaaattt 452  Q
    |||||| |||||||| ||||||||    
T  10244346 ctgtttatattaagagctaaattt 10244323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 135 - 452
Target Start/End: Complemental strand, 10238524 - 10238201
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10238524 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaatgtaccggttgaggaagaaccaaatcagccgccgctaactctattg 10238425  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||| ||||| | |||||||||||||||||||||||| | |||||| |  |||||||||||||||||||||||||||| ||||||||||||||||    
T  10238424 tgtgtttcatatcatatcctctctttggttatcgttgttgatgagagggctgtcttgaaagctttatccaggtattcctaatagcctaattcttaatatc 10238325  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaat 429  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||    
T  10238324 cttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaat 10238225  T
Q  430 ctgttt-tattaagacctaaattt 452  Q
    |||||| |||||||| ||||||||    
T  10238224 ctgtttatattaagagctaaattt 10238201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 149 - 453
Target Start/End: Complemental strand, 30051398 - 30051090
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||    
T  30051398 ctctcttctgcccatctgaagagaacttgaggcataaaggtaccggttgaggaagaatcaaatcagccgtcgctaactctattgtgtgtttcagatcatc 30051299  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    | |||||||||||||| ||||| ||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30051298 tcctctctttggttattgttgtcgattagagggctgtaatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 30051199  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctg-ttttattaagac 444  Q
    ||||||||||| ||| ||||||||||||||| ||||| ||||||||||||   |||||||||||||||||||||||||||||||||| ||||||||||||    
T  30051198 tgtcgtagatctgattataatcatgttcaatattttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttttattaagac 30051099  T
Q  445 ctaaatttt 453  Q
    |||||||||    
T  30051098 ctaaatttt 30051090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 135 - 452
Target Start/End: Complemental strand, 38455862 - 38455541
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38455862 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 38455763  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||||| |||||||||||||||||||||||| | ||||||     ||||||||||||||||||||||||||||||||||||||||||||    
T  38455762 tgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgcctcgaaagctttatccaggtattcctaataccctaattcttaatatc 38455663  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaat 429  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||   ||| ||||||||||||||||| |||||||||    
T  38455662 cttgataaatcaaacatgttgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgtattatgaaat 38455563  T
Q  430 ctgttttattaagacctaaattt 452  Q
    || || |||||||||| ||||||    
T  38455562 ct-ttatattaagaccgaaattt 38455541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 135 - 452
Target Start/End: Complemental strand, 10760962 - 10760639
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    |||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  10760962 cgtacacgacaatactctctcttctccccatctgaagagaacttgaggcataaaggtactggttgaggaagaaccaaatcagtcgccgctaactctattg 10760863  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||||| |||||||||||||||||||||||| | ||||||    |||||||||||||||||||||||||||||||||||||||||||||    
T  10760862 tgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgccttgaaagctttatccaggtattcctaataccctaattcttaatatc 10760763  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaat 429  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||   ||| ||||||||||||||||| |||||||||    
T  10760762 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttatttgcttccgctattgatttataattgttgaacatgtattatgaaat 10760663  T
Q  430 ctg-ttttattaagacctaaattt 452  Q
    ||| ||||| ||||||||||||||    
T  10760662 ctgtttttaataagacctaaattt 10760639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 135 - 452
Target Start/End: Complemental strand, 38449375 - 38449054
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38449375 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 38449276  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||||| |||||||||||||||||||||||| | ||||||     ||||| ||||||||||||||||||||||||||||||||||||||    
T  38449275 tgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgcctcgaaagttttatccaggtattcctaataccctaattcttaatatc 38449176  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaat 429  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||   ||| ||||||||||||||||| |||||||||    
T  38449175 cttgataaatcaaacatgttgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgtattatgaaat 38449076  T
Q  430 ctgttttattaagacctaaattt 452  Q
    || || |||||||||| ||||||    
T  38449075 ct-ttatattaagaccgaaattt 38449054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 149 - 452
Target Start/End: Original strand, 49151475 - 49151782
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||    
T  49151475 ctctcttctccccatctgaagagaacgtgaggcataaaggtaccggttgaggaagaatcaaatcagccaccgctaactctattgtgtgtttcagatcatc 49151574  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    | |||||||||||||||||||||||| | ||||||    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  49151575 tcctctctttggttatcgttgttgatgagagggctgccttgaaagctttatccaggtattcataataccctaattcttaatatccttaataaatcaaaca 49151674  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttt-tattaagac 444  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||||||| ||||||||||||||| |||||||||    
T  49151675 tgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttatattaagac 49151774  T
Q  445 ctaaattt 452  Q
    ||||||||    
T  49151775 ctaaattt 49151782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 149 - 452
Target Start/End: Original strand, 49157542 - 49157849
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||    
T  49157542 ctctcttctccccatctgaagagaacgtgaggcataaaggtaccggttgaggaagaatcaaatcagccaccgctaactctattgtgtgtttcagatcatc 49157641  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    | |||||||||||||||||||||||| | ||||||    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  49157642 tcctctctttggttatcgttgttgatgagagggctgccttgaaagctttatccaggtattcataataccctaattcttaatatccttaataaatcaaaca 49157741  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttt-tattaagac 444  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||||||| ||||||||||||||| |||||||||    
T  49157742 tgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttatattaagac 49157841  T
Q  445 ctaaattt 452  Q
    ||||||||    
T  49157842 ctaaattt 49157849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 135 - 452
Target Start/End: Complemental strand, 42191532 - 42191209
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  42191532 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccaccgctaactctattg 42191433  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||||| |||||||||||||| ||||||||| | ||||||    ||||||||||||||||||||||||||||||||||||||||||| |    
T  42191432 tgtgtttcagatcatctcctctctttggttatagttgttgatgagagggctgccttgaaagctttatccaggtattcctaataccctaattcttaatacc 42191333  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaat 429  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||   ||||| ||||||||||||||| |||||||||    
T  42191332 cttgataaatcaaacatgtcgtagatccgatcataatcaggttcaatgttttgtttgcttccgctattgattcacaattgttgaacatgtattatgaaat 42191233  T
Q  430 ctgttt-tattaagacctaaattt 452  Q
    || ||| |||||||||||| ||||    
T  42191232 ctatttatattaagacctatattt 42191209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 135 - 452
Target Start/End: Complemental strand, 42197474 - 42197151
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  42197474 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccaccgctaactctattg 42197375  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||||| |||||||||||||| ||||||||| | ||||||    ||||||||||||||||||||||||||||||||||||||||||| |    
T  42197374 tgtgtttcagatcatctcctctctttggttatagttgttgatgagagggctgccttgaaagctttatccaggtattcctaataccctaattcttaatacc 42197275  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaat 429  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||   ||||| ||||||||||||||| |||||||||    
T  42197274 cttgataaatcaaacatgtcgtagatccgatcataatcaggttcaatgttttgtttgcttccgctattgattcacaattgttgaacatgtattatgaaat 42197175  T
Q  430 ctgttt-tattaagacctaaattt 452  Q
    || ||| |||||||||||| ||||    
T  42197174 ctatttatattaagacctatattt 42197151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 149 - 452
Target Start/End: Original strand, 8331650 - 8331957
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  8331650 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgttttagatcatc 8331749  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    | |||||||||||||||||||||||  | ||||||    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8331750 tcctctctttggttatcgttgttgacgagagggctgccttgaaagctttatccaggtattcctaatagcctaattcttaatatccttgataaatcaaaca 8331849  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttt-tattaagac 444  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||   ||| |||||||||||||||||||||| |||||| ||| ||||||||     
T  8331850 tgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgttttataaaatctatttatattaagag 8331949  T
Q  445 ctaaattt 452  Q
    ||||||||    
T  8331950 ctaaattt 8331957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 149 - 452
Target Start/End: Complemental strand, 55003705 - 55003401
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||||| || ||||||||||||    
T  55003705 ctctcttctccccatctgaagagaacttgaggcataaaggtaccgattgaggaa---ccaaatcagccgccgctaactctattgtgtatttcagatcatc 55003609  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    || ||||||||||||||||||||||||| ||||||  |||||||||||||||||| |||| |||||||||||||||||||||| |||||||||| |||||    
T  55003608 ttttctctttggttatcgttgttgattagagggctgctatgaaagctttatccagatatttctaataccctaattcttaatatacttgataaattaaaca 55003509  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctg-ttttattaagac 444  Q
    ||||||||||||||||||||||||||||||||||||  ||||||| ||||   |||||||||||||||||||||||||||||||||| ||||||||||||    
T  55003508 tgtcgtagatccgatcataatcatgttcaatgttttatttgcttctgctattgattcataattgttgaacatgttttatgaaatctgtttttattaagac 55003409  T
Q  445 ctaaattt 452  Q
    ||||||||    
T  55003408 ctaaattt 55003401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 169 - 452
Target Start/End: Complemental strand, 11846340 - 11846052
Alignment:
Q  169 gagaacttgaggcataaaggtaccggttgaggaagaaccaaa-tcagccgccgctaactctattgcgtgtttcagatcatcttctctctttggttatcgt 267  Q
    ||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11846340 gagaacttgcggcataaaggttccggttgaggaagaaccaaaatcagccgccgctaactctattgtgtgtttcagatcatcttctctctttggttatcgt 11846241  T
Q  268 tgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcata 367  Q
    ||||||| | |||||| |||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11846240 tgttgatgagagggctgttacaaaagctttatccaggtattcctaataccctaattcttaatatacttgataaatcaaacatgtcgtagatccgatcata 11846141  T
Q  368 atcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgtttt-attaagacctaaattt 452  Q
    |||||||||||||||||| ||||||||||||   ||| ||||||||||||||||| |||| ||||||||||| ||||||||||||||||    
T  11846140 atcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgtattataaaatctgttttaattaagacctaaattt 11846052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 149 - 452
Target Start/End: Original strand, 13444921 - 13445221
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||| || ||  ||| |||||||||||    
T  13444921 ctctcttctccccatctgaagagaacttgaggcataaaagtatcggttgaggaagaaccaaatcagccgccactaaccctgttttgtggttcagatcatc 13445020  T
Q  249 t--tctc-tctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaa 345  Q
       |||| |||||| |||| ||||||  | | || ||| | ||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13445021 acatctcctctttgtttatggttgttactgagagagctgtcatgaatgttttatctaggtattcctaataccctaattcttaatatccttgataaatcaa 13445120  T
Q  346 acatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatct-gttttattaa 441  Q
    |||||||||||||||||||||          ||||||||  ||||||||||||   ||| |||||||||||||||||| ||| ||||||  ||||||| |    
T  13445121 acatgtcgtagatccgatcat----------aatgttttatttgcttccgctattgatttataattgttgaacatgttctatcaaatctatttttattta 13445210  T
Q  442 gacctaaattt 452  Q
    |||||||||||    
T  13445211 gacctaaattt 13445221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 149 - 453
Target Start/End: Complemental strand, 53069345 - 53069042
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctatt--gcgtgtttcagatca 246  Q
    |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||  ||||  | |||||||||||||    
T  53069345 ctctcttctccccatctgaagagaact----------aggtaccggttgaggaagaaccaaatcagccgccgctaaccatattttgtgtgtttcagatca 53069256  T
Q  247 tc-----ttctc-tctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccc-taattcttaatatccttgata 339  Q
    ||     ||||| |||||| |    ||||||| | | | | ||   ||||||| ||||||||||||||| |||||||| | |||||||||||||||||||    
T  53069255 tcacaccttctcatctttgtt----gttgttgttaagatgactaccatgaaagttttatccaggtattcttaatacccctgattcttaatatccttgata 53069160  T
Q  340 aatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctg-ttt 435  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||   ||| |||||||||||||||||||||| ||||||| |||    
T  53069159 aatcaaacatgtcatagatccgatcataatcatgttcaatgttttgtttgcttccgctatcgatttataattgttgaacatgttttataaaatctgtttt 53069060  T
Q  436 tattaagacctaaatttt 453  Q
    ||||||||||||||||||    
T  53069059 tattaagacctaaatttt 53069042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 135 - 283
Target Start/End: Complemental strand, 10769281 - 10769131
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10769281 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 10769182  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggct 283  Q
     || ||||||||||||| |||||||||||||||||||||||| | ||||||    
T  10769181 tgtatttcagatcatctcctctctttggttatcgttgttgatgagagggct 10769131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 288 - 452
Target Start/End: Complemental strand, 10767028 - 10766860
Alignment:
Q  288 tgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggt 387  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  10767028 tgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccggtcataatcatgttcaatgttttgtt 10766929  T
Q  388 tgcttccgc---taattcataattgttgaacatgttttatgaaatctg-ttttattaagacctaaattt 452  Q
    |||||||||   | ||| ||||||||||||||||| ||||||||| || ||||| ||||||||||||||    
T  10766928 tgcttccgctgttgatttataattgttgaacatgtattatgaaatttgtttttaataagacctaaattt 10766860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 246 - 452
Target Start/End: Complemental strand, 17593481 - 17593270
Alignment:
Q  246 atcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaa 345  Q
    |||| |||||||||||||||||||||||| | ||||||     ||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  17593481 atctcctctctttggttatcgttgttgatgagagggctgcctcgaaaggtttatccaggtattcctaataccctaattcttaatattcttgataaattaa 17593382  T
Q  346 acatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgc---taattcataattgttgaacatgttttatgaaatctgtttt--atta 440  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||   | ||| |  |||||||||||| | ||||||||| | ||||  ||||    
T  17593381 acatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgcgattgatttacgattgttgaacatctattatgaaatatatttttaatta 17593282  T
Q  441 agacctaaattt 452  Q
    ||||||||||||    
T  17593281 agacctaaattt 17593270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 150 - 452
Target Start/End: Complemental strand, 48128335 - 48128036
Alignment:
Q  150 tctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatct 249  Q
    |||||||||||  |||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||||||  | |||  |||| ||||||| ||    
T  48128335 tctcttctccctgtctgaagagaactaaaggcataaaggtaccagttgaggaagaaccaaatcagccgctgctaacattgttgtttgttccagatcacct 48128236  T
Q  250 tctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaa-taccctaattcttaatatccttgataaatcaaaca 348  Q
      | | |||    | ||||||||     || |||   ||||||| |||||| ||||||||| || |||||||||||||||||| ||| ||||||||||||    
T  48128235 cattttttt----accgttgttgtg---agagctgccatgaaagttttatc-aggtattccaaaataccctaattcttaatattcttaataaatcaaaca 48128144  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctg-ttttattaagac 444  Q
    ||||||||| ||||||||||||||||||||||||||| ||| ||||||||   ||||||||||||||||||||||| |||||||||| ||||||| ||||    
T  48128143 tgtcgtagaaccgatcataatcatgttcaatgttttgtttgtttccgctattgattcataattgttgaacatgtttcatgaaatctgtttttattgagac 48128044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 34300498 - 34300610
Alignment:
Q  287 atgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgg 386  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||     
T  34300498 atgaaagcttaattcaggtattcctaataccctaattcttaatatcctttataaatcaaatatgtcgtagatccgatcataatcatgttcaatgttttgt 34300597  T
Q  387 ttgcttccgctaa 399  Q
    |||||||||||||    
T  34300598 ttgcttccgctaa 34300610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 13837537 - 13837632
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagat 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13837537 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 13837632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 298 - 452
Target Start/End: Original strand, 28964881 - 28965036
Alignment:
Q  298 atccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgct 397  Q
    |||||||||||||||||  | ||| | || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28964881 atccaggtattcctaatttc-taactattgatatctttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgct 28964979  T
Q  398 aattcataattgttgaacatgttttatgaaatctgtttt--attaagacctaaattt 452  Q
    | |   | |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  28964980 attgattcattgttgaacatgttttatgaaatctgtttttaattaagacctaaattt 28965036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 26429729 - 26429639
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgcta 223  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26429729 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgcta 26429639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 150 - 453
Target Start/End: Original strand, 46656538 - 46656855
Alignment:
Q  150 tctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac-tctattgc-gtgtttcagat--- 244  Q
    ||||||||||||||||||| |||| | ||| ||||||||| |||||| ||||||| ||||||||  |||||||  | | | |||  |||||||| ||       
T  46656538 tctcttctccccatctgaatagaattagagacataaaggtgccggttaaggaagagccaaatcaatcgccgctggcatatgttgatgtgtttcatattat 46656637  T
Q  245 --catcttctctctttggtt---atcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgata 339  Q
      ||||| ||||| ||| ||   |||||||||| | | |||| | | |||||||||| || |||||||| |||||||||| ||||| |||||| ||||||    
T  46656638 atcatctcctctccttgttttagatcgttgttgttgagagggttgtcatgaaagcttcattcaggtatttctaataccctcattctcaatatcattgata 46656737  T
Q  340 aatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgc---taattcataattgttgaacatgttttatgaaatctg-ttt 435  Q
    |||||||||| ||||||||||||||||||| || || ||||||||  || |||| ||   ||||||||| || |||||||||||||||||||| || |||    
T  46656738 aatcaaacatatcgtagatccgatcataattatattgaatgttttatttacttcagctattaattcatatttattgaacatgttttatgaaatatgtttt 46656837  T
Q  436 tattaagacctaaatttt 453  Q
    |||| |||||||| ||||    
T  46656838 tatttagacctaattttt 46656855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 171 - 385
Target Start/End: Complemental strand, 12108945 - 12108728
Alignment:
Q  171 gaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac-tctattgcgtgtttcagatcatcttctctctttggtt---atcg 266  Q
    |||||||||||||||||||||||||| | ||||||||||||||| |||||||||| | | ||| |||||||| |||| ||  |||||  | ||   | ||    
T  12108945 gaacttgaggcataaaggtaccggttaaagaagaaccaaatcagtcgccgctaacctatgttgtgtgtttcatatcacctcatctctccgtttcagaccg 12108846  T
Q  267 ttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcat 366  Q
    ||  || | | | || | | || | ||||| || ||||||||| ||||||| ||||| |||||||||||||||||||||||||||| ||||||  |||||    
T  12108845 ttcatgttcagaaggttgtcattagagcttcattcaggtattcttaatacc-taattgttaatatccttgataaatcaaacatgtcttagatcaaatcat 12108747  T
Q  367 aatcatgttcaatgttttg 385  Q
    |||||| ||||||||||||    
T  12108746 aatcatattcaatgttttg 12108728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 362 - 452
Target Start/End: Complemental strand, 24643635 - 24643540
Alignment:
Q  362 atcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttt--tatgaaatctgttttattaagacctaaattt 452  Q
    |||||||||||||||||||||||  || |||||||||   |||||||| ||||||||||||||  |||||| | ||||||||||||||||||||||    
T  24643635 atcataatcatgttcaatgttttatttacttccgctattgattcataaatgttgaacatgttttatatgaagtttgttttattaagacctaaattt 24643540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 10238829 - 10238787
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10238829 attattaagatatgtagcccaagtgggagattgttggaatatt 10238787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 49157223 - 49157265
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  49157223 attattaagatatgtagcccaagtgggagattgttggaatatt 49157265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 28964743 - 28964811
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac 225  Q
    ||||||||||||||||||||||||||| |||||||        |||||||||||||||||||| |||||||||||||    
T  28964743 ctctcttctccccatctgaagagaactcgaggcat--------cggttgaggaagaaccaaattagccgccgctaac 28964811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 10761266 - 10761224
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  10761266 attattaagatatgtagcccaagtggaagattgttggaatatt 10761224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 11840342 - 11840300
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  11840342 attattaagatatgtagcccaagtaggagattgttggaatatt 11840300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 183 - 225
Target Start/End: Complemental strand, 24643815 - 24643773
Alignment:
Q  183 taaaggtaccggttgaggaagaaccaaatcagccgccgctaac 225  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  24643815 taaaggtaccggttgagaaagaaccaaatcagccgccgctaac 24643773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 34300369 - 34300429
Alignment:
Q  165 tgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac 225  Q
    ||||||||||||||||||| || ||||||||||| ||| |||||||| || ||||||||||    
T  34300369 tgaagagaacttgaggcatgaaagtaccggttgaagaataaccaaataagtcgccgctaac 34300429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 38449679 - 38449637
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    ||||||||||||||||||||||||||  |||||||||||||||    
T  38449679 attattaagatatgtagcccaagtggtggattgttggaatatt 38449637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 42191837 - 42191795
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  42191837 attattaagatatgtagcccaagtaggagattgttagaatatt 42191795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 24644107 - 24644065
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||| |||||||||||| | |||||||||||||||||||||||    
T  24644107 attactaagatatgtagtctaagtgggagattgttggaatatt 24644065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 247; Significance: 1e-137; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 135 - 452
Target Start/End: Complemental strand, 25387816 - 25387493
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25387816 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 25387717  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||||| |||||||||||||||||||||||| | |||||| || | |||||||||||||||||||||||||||||||||||||||||||    
T  25387716 tgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgtttttaaagctttatccaggtattcctaataccctaattcttaatatc 25387617  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaat 429  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||| |||||||||||||||||||||||    
T  25387616 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcatatttgttgaacatgttttatgaaat 25387517  T
Q  430 ctgttt-tattaagacctaaattt 452  Q
    |||||| |||||||| ||| ||||    
T  25387516 ctgtttatattaagatctatattt 25387493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 135 - 452
Target Start/End: Complemental strand, 25381847 - 25381524
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25381847 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 25381748  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||||| |||||||||||||||||||||||| | |||||| |||  |||||||||||||||||||||||||||||||||||||||||||    
T  25381747 tgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgttacaaaagctttatccaggtattcctaataccctaattcttaatatc 25381648  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaat 429  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||| ||||||||||||| |||||||||    
T  25381647 cttggtaaatcaaacatttcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcatagttgttgaacatgtattatgaaat 25381548  T
Q  430 ctgttt-tattaagacctaaattt 452  Q
    |||||| |||||||||||| ||||    
T  25381547 ctgtttatattaagacctatattt 25381524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 149 - 452
Target Start/End: Original strand, 34739849 - 34740156
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  34739849 ctctcttctcccaatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatt 34739948  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    |||||||||||||||||||||||||| | ||||||    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34739949 ttctctctttggttatcgttgttgatgagagggctgccttgaaaggtttattcaggtattcctaataccctaattcttaatatccttgataaatcaaaca 34740048  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttt-tattaagac 444  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||| ||||||||||||||||||||||||| |||||||||    
T  34740049 tgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgatgaacatgttttatgaaatctgtttatattaagac 34740148  T
Q  445 ctaaattt 452  Q
    ||||||||    
T  34740149 ctaaattt 34740156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 135 - 452
Target Start/End: Original strand, 50306045 - 50306359
Alignment:
Q  135 cgtacacggcaa-tactctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgc 233  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||     
T  50306045 cgtacacggcaaattctctcttctccccatctgaagagaacttgaggc-------taccggttgaggaagaaccaaatcagccgccgctaactctattgt 50306137  T
Q  234 gtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatcc 333  Q
    |||||||||||||||| |||||||||||||||||||||||| | ||||||    |||||||||||||||||||||||||||| ||||||||||||||| |    
T  50306138 gtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgccttgaaagctttatccaggtattcctaatagcctaattcttaatat-c 50306236  T
Q  334 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatc 430  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||   ||||||||||||||||||||||||||||||||    
T  50306237 ttgataaatcaaacatgtcgtagatccgattataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatc 50306336  T
Q  431 tgttt-tattaagacctaaattt 452  Q
    ||||| |||||||||||||||||    
T  50306337 tgtttatattaagacctaaattt 50306359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 135 - 452
Target Start/End: Original strand, 31057892 - 31058214
Alignment:
Q  135 cgtacacggcaatactct--cttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    |||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  31057892 cgtacacgacaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttaaggaagaaccaaatcagtcgccgctaactctattg 31057991  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||| ||||||||| |||||||||||||||||||||||| | |||| |  ||  |||| |||||||| |||||| |||||||||||||||||||||     
T  31057992 tgtgttttagatcatctcctctctttggttatcgttgttgatgagagggttgctacaaaagttttatccaagtattcttaataccctaattcttaatat- 31058090  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaat 429  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||| |  |||||||||||||| |||||||||    
T  31058091 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaat 31058190  T
Q  430 ctgttt-tattaagacctaaattt 452  Q
    |||||| |||||||||||||||||    
T  31058191 ctgtttatattaagacctaaattt 31058214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 135 - 451
Target Start/End: Original strand, 31051392 - 31051718
Alignment:
Q  135 cgtacacggcaatactct--cttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    |||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  31051392 cgtacacgacaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttaaggaagaaccaaatcagccgccgctaactctattg 31051491  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||||| |||||||||||||||||||||||| |||||| |  ||  |||| ||||||||||||||| |||||||||||||||||||||     
T  31051492 tgtgtttcagatcatctcctctctttggttatcgttgttgatgaaagggttgctacaaaagttttatccaggtattcttaataccctaattcttaatat- 31051590  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttt-----tat 424  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||   ||| |  |||||||||||||| |     |||    
T  31051591 cttgataaatcaaacatgtcgtagatccaatcataatcatgttcaatgttttgtttgcttccgctattgatttacgattgttgaacatgtattatgatat 31051690  T
Q  425 gaaatctgttt-tattaagacctaaatt 451  Q
    ||||||||||| ||||||||||||||||    
T  31051691 gaaatctgtttatattaagacctaaatt 31051718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 149 - 398
Target Start/End: Complemental strand, 8093142 - 8092893
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactcta-ttgcgtgtttcagatcat 247  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||  |||||||||||||    
T  8093142 ctcttttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac-ctagttgtttgtttcagatcat 8093044  T
Q  248 cttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaac 347  Q
    ||  ||||||||||||||||||||||| | ||| ||  ||  |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  8093043 ctcatctctttggttatcgttgttgatgagaggactgctacaaaagctttatccaggtattcctcatacccaaattcttaatatccttgataaatcaaac 8092944  T
Q  348 atgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta 398  Q
    ||||| |||||||||||||||||||||||||||||||  ||||||| ||||    
T  8092943 atgtcatagatccgatcataatcatgttcaatgttttatttgcttctgcta 8092893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 135 - 452
Target Start/End: Original strand, 1078092 - 1078394
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1078092 cgtacacggcaatactctctcttctcaccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagcggccgctaactctattg 1078191  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||     ||||                ||| | |||||| |||  |||||||||||||||||||| |||||||||||||||||||||     
T  1078192 tgtgtttcagatca-----tctc----------------gatgagagggctgttacaaaagctttatccaggtattcttaataccctaattcttaatatt 1078270  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaat 429  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||| ||||||||||||||||| |||||||||    
T  1078271 cttggtaaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattaataattgttgaacatgtattatgaaat 1078370  T
Q  430 ctgttt-tattaagacctaaattt 452  Q
    |||||| |||||||||||||||||    
T  1078371 ctgtttatattaagacctaaattt 1078394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 149 - 452
Target Start/End: Original strand, 44409864 - 44410180
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactct--at--------tgcgtgtt 238  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |  ||        ||  ||||    
T  44409864 ctctcttctccccatctgaagagaacttgaggcataaaggtactggttgaggaagaaccaaatcagccgccgctaaccgttgatgaagttgatgtttgtt 44409963  T
Q  239 tcagatcatcttctctctttggttatcgttgttgatt---aaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatcctt 335  Q
    |||||||| || ||||||    |||||||||||| |    | ||||||   || |||||||||||||||||||||||||||  |||||||| ||||||||    
T  44409964 tcagatcacctcctctctcc--ttatcgttgttgttgttgagagggctgccataaaagctttatccaggtattcctaatac--taattcttgatatcctt 44410059  T
Q  336 gataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctg 432  Q
    |||||||||||||||||||||||||| ||||| | ||||||||||||||| ||||||||||||   ||||||||| ||||||||||||||||||||||||    
T  44410060 gataaatcaaacatgtcgtagatccgttcatatttatgttcaatgttttgtttgcttccgctattgattcataatcgttgaacatgttttatgaaatctg 44410159  T
Q  433 -ttttattaagacctaaattt 452  Q
     ||||| ||||||||||||||    
T  44410160 tttttagtaagacctaaattt 44410180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 149 - 453
Target Start/End: Complemental strand, 24927057 - 24926743
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcg---------tgttt 239  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||  | |||           |||||    
T  24927057 ctctcttctccccatctgaagagaacttgaggcatataggtaccggttgaggaagaaccaaatcagctgccactaaccgtgttgatgttgatgtttgttt 24926958  T
Q  240 cagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatc--caggtattcctaataccctaattcttaatatccttga 337  Q
    ||||||| || ||||||||    ||||||||||   | || |||   |  ||||||| |||  ||||||||||||||||  ||||||||||||| |||||    
T  24926957 cagatcacctcctctcttt----atcgttgttgtcgagagtgctgccaccaaagcttcatcttcaggtattcctaatacgttaattcttaatattcttga 24926862  T
Q  338 taaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctg-t 433  Q
    |||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||   ||||||||| ||||||||||||||||| |||||| |    
T  24926861 taaatcaaacatgtcgtagatccgttcatattaatgttcaatgttttggttgcttccgctattgattcataatcgttgaacatgttttatg-aatctgtt 24926763  T
Q  434 tttattaagacctaaatttt 453  Q
    ||||||||||||||||||||    
T  24926762 tttattaagacctaaatttt 24926743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 150 - 452
Target Start/End: Original strand, 27955025 - 27955330
Alignment:
Q  150 tctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgcgtgtttcagatcat 247  Q
    |||||||||||||||||| |||||||| || |||||||||||||||||||||| ||| ||||||| || || ||||  | | ||| ||||||||||||||    
T  27955025 tctcttctccccatctga-gagaacttaagacataaaggtaccggttgaggaataactaaatcagtcgtcgttaacattttgttgtgtgtttcagatcat 27955123  T
Q  248 c---ttctctctttggttatcgttgttgattaaaggg--ctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaat 342  Q
    |   | ||||||||  |||||||||||| | | || |  || | ||||||||||||||||||| ||||||||||| || || || ||||||||     ||    
T  27955124 cacatcctctctttctttatcgttgttgttgagagagagctatcatgaaagctttatccaggtcttcctaatacctta-ttatttatatcctt-----at 27955217  T
Q  343 caaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgctaat--tcataattgttgaacatgttttatgaaatctg-ttttatt 439  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |  | || ||| || |||||||||||||||||||| |||||||    
T  27955218 caaacatgttgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattatgattattaaacatgttttatgaaatctgtttttatt 27955317  T
Q  440 aagacctaaattt 452  Q
    |||||||||||||    
T  27955318 aagacctaaattt 27955330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 149 - 453
Target Start/End: Complemental strand, 24964005 - 24963690
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcg---------tgttt 239  Q
    ||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||   || |||||  | |||           |||||    
T  24964005 ctctcttctccccatctgaagaggacttgaggcataaatgtactggttgaggaagaaccaaatcagtttccactaaccgtgttgatgttgatgtttgttt 24963906  T
Q  240 cagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatc--caggtattcctaataccctaattcttaatatccttga 337  Q
    ||||||| || ||||||||    ||||||||||   | ||||||   |  ||||||| |||  ||||||||||||||||  ||||||||| ||| |||||    
T  24963905 cagatcacctcctctcttt----atcgttgttgtcgagagggctaccaccaaagcttcatcttcaggtattcctaatactttaattcttactattcttga 24963810  T
Q  338 taaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctg-t 433  Q
    ||||||||||||| |||||||||| ||||| ||||||||||||||||| ||||||||||||   ||||||| | |||||||||||||||||||||||| |    
T  24963809 taaatcaaacatggcgtagatccgttcatattcatgttcaatgttttgtttgcttccgctattgattcatattcgttgaacatgttttatgaaatctgtt 24963710  T
Q  434 tttattaagacctaaatttt 453  Q
    |||||||||| |||||||||    
T  24963709 tttattaagatctaaatttt 24963690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 152 - 444
Target Start/End: Complemental strand, 38152257 - 38151973
Alignment:
Q  152 tcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac-tctattgcgtgtttcagatcatctt 250  Q
    |||||||||||||| |||| ||||||| ||||||||||||||||||| |||||||||||| ||| ||||||||| | | ||| || |||||||||||  |    
T  38152257 tcttctccccatctaaagaaaacttgaagcataaaggtaccggttgaagaagaaccaaattagctgccgctaacgtatgttgtgtatttcagatcatggt 38152158  T
Q  251 ctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatg 350  Q
     ||||       ||| |||||| | | |||  | | || |||| || || |||||||||||||||||||||||||||||||  |||||||||||||||||    
T  38152157 ttctcc------atcattgttgttgagaggattgtcatcaaagtttcattcaggtattcctaataccctaattcttaatatgtttgataaatcaaacatg 38152064  T
Q  351 tcgtagatccgatcataatcatgttcaatgttttggttgcttccgc---taattcataattgttgaacatgttttatgaaatctgttttattaagac 444  Q
    |||||||||      | |||||||||||| ||||| ||||||||||   | ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  38152063 tcgtagatc------tgatcatgttcaatattttgtttgcttccgctgttgattaataattgttgaacatgttttatgaaatctattttattaagac 38151973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 167 - 452
Target Start/End: Complemental strand, 12183867 - 12183568
Alignment:
Q  167 aagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactc-tattgcgtgtttcag---atcatcttctctctttggtt 262  Q
    |||||||||||||||||||||||| |||||||| || ||||||||||| ||| | |||| | |  || |||||||||   |||| |||||||||  | ||    
T  12183867 aagagaacttgaggcataaaggtagcggttgagaaataaccaaatcagtcgctggtaacccttgctgtgtgtttcagattatcaccttctctctcggttt 12183768  T
Q  263 atcgttgttgattaa--agggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatcc 360  Q
    |  |||| || | ||  | || |  |||||||||||||| |||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||    
T  12183767 acggttgatgttgaaataaggttgctatgaaagctttattcaggtattcctaatactcaaattcttaatat-cttgataaatcaaacatgtcgtagatcc 12183669  T
Q  361 gatcataatcatgttcaatgttttggttgcttccgcta---attcata-----attgttgaacatgttttatgaaatct-gttttattaagacctaaatt 451  Q
     |||||||| ||||||||| ||||| |||||||| |||   |||||||     |||||||||||| |||||||||||||  ||||||||||| |||||||    
T  12183668 aatcataattatgttcaatattttgtttgcttccactattgattcataattatattgttgaacatattttatgaaatctatttttattaagaactaaatt 12183569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 24927385 - 24927343
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  24927385 attattaagatatgtagcccaagtgggagattgttggaatatt 24927343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 25382152 - 25382110
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  25382152 attattaagatatgtagcccaagtgggagattgttggaatatt 25382110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 12184213 - 12184171
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  12184213 attattaagatatgtagcccaagtggaagattgttggaatatt 12184171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 31057588 - 31057630
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  31057588 attattaagatatgtagctcaagtgggagattgttggaatatt 31057630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 23254012 - 23254063
Alignment:
Q  148 actctcttctccccatctgaagagaacttgaggcataaaggtaccggttgagg 200  Q
    |||||||||||||||| |||| ||||||||| ||||||| ||| |||||||||    
T  23254012 actctcttctccccatatgaaaagaacttgatgcataaatgta-cggttgagg 23254063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 149 - 452
Target Start/End: Complemental strand, 3817607 - 3817300
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3817607 ctctcttctccccatctgaagagaacttgaggcataaaggtactggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatc 3817508  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    |||||||||||||||||||||||||| | |||| |    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3817507 ttctctctttggttatcgttgttgatgagagggttgccttgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 3817408  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttt-tattaagac 444  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||||||| ||||||||||||||| |||||||||    
T  3817407 tgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttatattaagac 3817308  T
Q  445 ctaaattt 452  Q
    ||||||||    
T  3817307 ctaaattt 3817300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 149 - 452
Target Start/End: Complemental strand, 3811465 - 3811158
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3811465 ctctcttctccccatctgaagagaacttgaggcataaaggtactggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatc 3811366  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    |||||||||| ||||||||||||||| | |||| |    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3811365 ttctctcttttgttatcgttgttgatgagagggttgccttgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 3811266  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttt-tattaagac 444  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||||||| ||||||||||||||| |||||||||    
T  3811265 tgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttatattaagac 3811166  T
Q  445 ctaaattt 452  Q
    ||| ||||    
T  3811165 ctacattt 3811158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 149 - 452
Target Start/End: Complemental strand, 28421255 - 28420948
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28421255 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatc 28421156  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    | |||||||||||||||||||||||| | ||||||    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28421155 tcctctctttggttatcgttgttgatgagagggctgccttgaaagctttatccaggtattcctaatagcctaattcttaatatccttgataaatcaaaca 28421056  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttt-tattaagac 444  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||   ||| ||||||||||||||||||||||||||||||||| ||| ||||     
T  28421055 tgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgttttatgaaatctgtttatatcaagag 28420956  T
Q  445 ctaaattt 452  Q
    ||||||||    
T  28420955 ctaaattt 28420948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 135 - 452
Target Start/End: Original strand, 20238798 - 20239121
Alignment:
Q  135 cgtacacggcaatactct--cttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20238798 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 20238897  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     ||||||||||||||||  ||||||||||||| ||||||||| | ||||||    |||||||||||||||||||||||||||||||||||||||||||||    
T  20238898 tgtgtttcagatcatctcatctctttggttattgttgttgatgagagggctgccttgaaagctttatccaggtattcctaataccctaattcttaatatc 20238997  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaat 429  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||  || ||||||||||||||||||||||||    
T  20238998 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgatgtatgattgttgaacatgttttatgaaat 20239097  T
Q  430 ctgttt-tattaagacctaaattt 452  Q
     ||||| |||||||||||||||||    
T  20239098 ttgtttatattaagacctaaattt 20239121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 149 - 452
Target Start/End: Original strand, 351650 - 351956
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  351650 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatc 351749  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    | |||| ||||||||||||||||||| | ||||||    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  351750 tcctct-tttggttatcgttgttgatgagagggctgccttgaaagctttatccaggtattcctaatagcctaattcttaatatccttgataaatcaaaca 351848  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgc---taattcataattgttgaacatgttttatgaaatctgttt-tattaagac 444  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||||     
T  351849 tgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctgttgattcataattgttgaacatgttttatgaaatctgtttatattaagag 351948  T
Q  445 ctaaattt 452  Q
    ||||||||    
T  351949 ctaaattt 351956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 149 - 452
Target Start/End: Original strand, 339243 - 339541
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  339243 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatc 339342  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    | ||||||||||||||| |||||| | |         |  || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  339343 tcctctctttggttatcattgttgttga---------tgagagagctttatccaggtattcctaatagcctaattcttaatatccttgataaatcaaaca 339433  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttt-tattaagac 444  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||||||||||||||||||| ||| ||||||||     
T  339434 tgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctctttatattaagag 339533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 135 - 453
Target Start/End: Complemental strand, 5979486 - 5979161
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    |||||||| |||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||    
T  5979486 cgtacacgacaatactctctcttctccccatctgaagagaacttgaggcataaaagtaccggttgaggaagaaccaaattagtcgccgctaactctattg 5979387  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||||| |||||||||||||||||||||||| | || |||  ||  ||||||||||||||||||||||||||||||||||||||| |||    
T  5979386 tgtgtttcagatcatctcctctctttggttatcgttgttgatgagagagctgctacaaaagctttatccaggtattcctaataccctaattcttaacatc 5979287  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaat 429  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||  |||| |||||| |||||   ||| |  |||||| ||||||| |||||||||    
T  5979286 cttaataaatcaaacatgtcgtagatccaatcataatcatgttcaatagtttgtttgctttcgctattgatttacgattgttcaacatgtattatgaaat 5979187  T
Q  430 ctgtttt--attaagacctaaatttt 453  Q
    |||||||  |||||||||||||||||    
T  5979186 ctgtttttaattaagacctaaatttt 5979161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 149 - 449
Target Start/End: Complemental strand, 35148305 - 35147996
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctatt--gcgtgtttcagatca 246  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||  ||||  | |||||||||||||    
T  35148305 ctctcttctccccatctgaagagaatttgaggcataaaggtaccggttgaggaagaaccaaatcagccgctgctgaccatattttgtgtgtttcagatca 35148206  T
Q  247 tc-----ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccc-taattcttaatatccttgataa 340  Q
    ||     |||||   || |||   ||||||| |   ||||||   |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  35148205 tcccaccttctcatatttgtt---gttgttgttacgagggctaccatgaaagctttatccaggtattcctaatacccctaattcttaatatccttgataa 35148109  T
Q  341 atcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctg-tttt 436  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||   ||| |||||||||||||||||||||||||||||| ||||    
T  35148108 atcaaacgtgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctatcgatttataattgttgaacatgttttatgaaatctgttttt 35148009  T
Q  437 attaagacctaaa 449  Q
    |||||||| ||||    
T  35148008 attaagacataaa 35147996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 239 - 452
Target Start/End: Complemental strand, 42767501 - 42767283
Alignment:
Q  239 tcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgat 338  Q
    ||||||||||||||||||||| |||||||||||||| | ||||||  ||  |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42767501 tcagatcatcttctctctttgattatcgttgttgatgagagggctgctacaaaagctttatccagatattcctaataccctaattcttaatatccttgat 42767402  T
Q  339 aaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttt 435  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||   ||||||||||||||||||||| |||||||||||||||    
T  42767401 aaatcaaatatgtcgtagatccgatcataatcatgttcaatattttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgttt 42767302  T
Q  436 t--attaagacctaaattt 452  Q
    |  ||||||||||||||||    
T  42767301 ttaattaagacctaaattt 42767283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 159 - 436
Target Start/End: Original strand, 43539853 - 43540138
Alignment:
Q  159 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctatt--gcgtgtttcagatcatc---ttctc 253  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||  ||||  | |||||||||||||||   | |||    
T  43539853 cccatctgaagagaactttaggcataaaggtactggttgaggaagaaccaaatcagtcgccgctaaccatattttgtgtgtttcagatcatcacctcctc 43539952  T
Q  254 tctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcg 353  Q
    |||||| |||||||||||| | | |||  | |||| ||||||| |||||||||||| ||||||||||||| ||||||| ||||||||||||||||||| |    
T  43539953 tctttgtttatcgttgttgttgagaggattgttatcaaagcttcatccaggtattcataataccctaatttttaatattcttgataaatcaaacatgttg 43540052  T
Q  354 tagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgtttt 436  Q
    |||||||||||||||||||||||||| ||||  ||  ||||||||   |||||||||| ||||||||||| |||||||||||||||    
T  43540053 tagatccgatcataatcatgttcaatattttatttaattccgctattgattcataattattgaacatgttctatgaaatctgtttt 43540138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 149 - 327
Target Start/End: Original strand, 15843810 - 15843988
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    |||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  15843810 ctctattctccccatctgaagagaacttgaggcataaatgtaccagttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttccgatcatc 15843909  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattctta 327  Q
    | |||||||||||||| ||||||||||| ||||||  ||||||||||| ||||||||||||||||||||||||||||||    
T  15843910 tcctctctttggttattgttgttgattagagggctgctatgaaagcttgatccaggtattcctaataccctaattctta 15843988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 149 - 327
Target Start/End: Original strand, 15860919 - 15861097
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    |||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  15860919 ctctattctccccatctgaagagaacttgaggcataaatgtaccagttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttccgatcatc 15861018  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattctta 327  Q
    | |||||||||||||| ||||||||||| ||||||  ||||||||||| ||||||||||||||||||||||||||||||    
T  15861019 tcctctctttggttattgttgttgattagagggctgctatgaaagcttgatccaggtattcctaataccctaattctta 15861097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 135 - 452
Target Start/End: Original strand, 5849378 - 5849696
Alignment:
Q  135 cgtacacggcaatactctctt--ctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac-tctatt 231  Q
    |||||||||||| ||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | | ||    
T  5849378 cgtacacggcaa-actctcttttctccccatctgaagataacttgaggcataaaggtaccggttgaggaagaaccaaatcagacgccgctaacatatgtt 5849476  T
Q  232 gcgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatat 331  Q
    | || |||||||||||  | ||||       |||||||||| | | || ||| | || ||||||| |||||||||||||||||| |||||||||| ||||    
T  5849477 gtgtatttcagatcatagtttctcc------atcgttgttgttgagagagctgtcattaaagcttcatccaggtattcctaatatcctaattcttgatat 5849570  T
Q  332 ccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacat-gttttatgaa 427  Q
    |||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||   |||||||||  ||||||||  |||||| ||    
T  5849571 ccttgataaatcaaacatgtcgtagatccgttcatatttatgttcaatgttttggttgcttccgctattgattcataatcattgaacataattttataaa 5849670  T
Q  428 atctg-ttttattaagacctaaattt 452  Q
    || || ||||||||||||||||||||    
T  5849671 atttgtttttattaagacctaaattt 5849696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 180 - 452
Target Start/End: Original strand, 12803893 - 12804170
Alignment:
Q  180 gcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcg---tgtttcagatcatcttctctctttggttatcgttgttgatta 276  Q
    |||||||||||||||||||||||||||| |||||| || |||||||  | |||     ||||||| |||| || ||||||||    ||||||||||   |    
T  12803893 gcataaaggtaccggttgaggaagaacctaatcagtcgtcgctaaccatgttgatgtttgtttcaaatcacctcctctcttt----atcgttgttgtcga 12803988  T
Q  277 aagggctcttatgaaagctttatcc--aggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgt 374  Q
     ||||||  ||  ||||||| ||||  |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||  ||||||    
T  12803989 gagggctgctaccaaagcttcatccccaggtattcttaataccctaattcttaatattcttgataaatcaaacatgtcgtagatccgttcatgttcatgt 12804088  T
Q  375 tcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctg-ttttattaagacctaaattt 452  Q
    ||||||||||| ||||||||||||   ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  12804089 tcaatgttttgcttgcttccgctattgattcataatcgttgaacatgttttatgaaatctgtttttattaagacctaaattt 12804170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 149 - 452
Target Start/End: Complemental strand, 22742225 - 22741907
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcg---------tgttt 239  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||  | |||           |||||    
T  22742225 ctctcttctcccaatctgaagagaacttgaggcataaaggtaccagttgatgaaaaaccaaatcagccgccgctaaccgtgttgatgttgatatttgttt 22742126  T
Q  240 cagatcatcttctctctttggttatcgttgttgattaa-agggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgat 338  Q
    |||||||||| ||||||||    |||||||||  | || ||||||   |  | ||||| |||||||||||||||||||| |||| || |||||| |||||    
T  22742125 cagatcatctcctctcttt----atcgttgtttgtcaagagggctgccaccatagcttcatccaggtattcctaatacc-taatcctcaatatc-ttgat 22742032  T
Q  339 aaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta----------attcataattgttgaacatgttttatgaaa 428  Q
    ||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||          ||||||||||||||||||||||||||||||    
T  22742031 aaatcaaacatgtcgtagatccgatcataatcatgttcaatgttcagtttgcttccgctattgttgattcattcataattgttgaacatgttttatgaaa 22741932  T
Q  429 tctgtt-ttattaagacctaaattt 452  Q
     ||||| ||||| ||||||||||||    
T  22741931 cctgttcttattgagacctaaattt 22741907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 290 - 431
Target Start/End: Original strand, 26383630 - 26383774
Alignment:
Q  290 aaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttg 389  Q
    ||||||| ||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||    
T  26383630 aaagcttcatcaaggtattcctaataccctaattcttagtatgcttgataaatcaaacatgtcgtagatccgatcatgatcatgttcaatattttgtttg 26383729  T
Q  390 cttc---cgctaattcataattgttgaacatgttttatgaaatct 431  Q
     |||    | | ||||||||||||||||||||| |||||||||||    
T  26383730 tttctgttgttgattcataattgttgaacatgtcttatgaaatct 26383774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 287 - 419
Target Start/End: Complemental strand, 30219404 - 30219269
Alignment:
Q  287 atgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgg 386  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||| || ||||||||||||||||||||||||| ||||| |||||||||| ||||||     
T  30219404 atgaaagctttatccagatattcctaataccataattcttaatatctttaataaatcaaacatgtcgtagatccgttcatattcatgttcaacgttttgt 30219305  T
Q  387 ttgcttccgcta---attcataattgttgaacatgt 419  Q
    ||| ||||||||   |||||||||| ||||||||||    
T  30219304 ttgattccgctaatgattcataattattgaacatgt 30219269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 35150837 - 35150736
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgcgtgtttcagatca 246  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||  | | ||| |||||||||||||    
T  35150837 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaagaataaccaaatcagccgccgctaaccatattttgtgtgtttcagatca 35150738  T
Q  247 tc 248  Q
    ||    
T  35150737 tc 35150736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 149 - 452
Target Start/End: Original strand, 26380947 - 26381238
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac-tctattgcgtgtttcagatcat 247  Q
    |||||||||||| ||||||||| ||||| ||||||||||||| | |||||||||||||||||||||||||||||||| |   ||| || ||||| |||||    
T  26380947 ctctcttctcccgatctgaagaaaactttaggcataaaggtagcagttgaggaagaaccaaatcagccgccgctaacgtaagttgtgtatttcatatcat 26381046  T
Q  248 cttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaac 347  Q
      | |||      | |||||||||| | | |||| | | || ||||||| ||||| ||| ||||||||||||||||||||  || |||||||||          
T  26381047 ggtttct------tcatcgttgttgttgagagggttgtcatcaaagcttcatcca-gtactcctaataccctaattcttagcatgcttgataaa------ 26381133  T
Q  348 atgtcgtagatccgatcataatcatgttcaatgttttggttgctt---ccgctaattcataattgttgaacatgttttatgaaatctgttttattaagac 444  Q
       | ||||||| |||||| |||||||||||| || || ||| ||   ||  | ||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  26381134 ---tagtagatctgatcatgatcatgttcaatattgtgtttgttttcccccttgattcataattgttgaacatgtcttatgaaatctattttatttagac 26381230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 150 - 316
Target Start/End: Original strand, 7608306 - 7608475
Alignment:
Q  150 tctcttctcccc-atctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaa--ctctattgcgtgtttcagatca 246  Q
    |||||||||||| ||| |||||||||||||| ||||||||||||| || |||||| |||||||||| |||||||||  | ||  || |||||||||||||    
T  7608306 tctcttctcccccatcggaagagaacttgagtcataaaggtaccgatttaggaagtaccaaatcagtcgccgctaatccgcttatgtgtgtttcagatca 7608405  T
Q  247 tcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaatac 316  Q
    |||  |||||||||||||| |||||||| | | | || | || |||||||||| ||| |||| |||||||    
T  7608406 tctcatctctttggttatcattgttgatgagatgactgtcatcaaagctttattcagatatttctaatac 7608475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 3677889 - 3677965
Alignment:
Q  150 tctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaact 226  Q
    ||||||||| |||||||||||||| |||||||||||| ||| |||||||||||||| ||||||| | |||| |||||    
T  3677889 tctcttctctccatctgaagagaaattgaggcataaaagtatcggttgaggaagaaacaaatcaactgccggtaact 3677965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 394
Target Start/End: Complemental strand, 18666622 - 18666547
Alignment:
Q  318 ctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttcc 394  Q
    |||||| |||||||| ||| |||||||||||||||||| ||| ||||||||||| ||||||||||||| ||||||||    
T  18666622 ctaattattaatatcattgctaaatcaaacatgtcgta-atctgatcataatcaagttcaatgttttgtttgcttcc 18666547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 351331 - 351373
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  351331 attattaagatatgtagcccaagtgggagattgttggaatatt 351373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 3811786 - 3811744
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  3811786 attattaagatatgtagcccaagtgggagattgttggaatatt 3811744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 35148625 - 35148583
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  35148625 attattaagatatgtagcccaagtgggagattgttggaatatt 35148583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 26383212 - 26383253
Alignment:
Q  10 ttattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  26383212 ttattgagatatgtagcccaagtgggagattgttggaatatt 26383253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 246
Target Start/End: Original strand, 24690848 - 24690900
Alignment:
Q  192 cggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatca 246  Q
    |||||||||||||||||||||||||||||||||| |  |||| ||||||||||||    
T  24690848 cggttgaggaagaaccaaatcagccgccgctaaccc--ttgcttgtttcagatca 24690900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 18656948 - 18656883
Alignment:
Q  150 tctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagc 215  Q
    ||||||||| || |||||||||||||  || |||||| ||| | ||||||||||||||||||||||    
T  18656948 tctcttctctccgtctgaagagaactaaagacataaaagtaacagttgaggaagaaccaaatcagc 18656883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 26383532 - 26383569
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaa 186  Q
    |||||||||||| || ||||||||||||||||||||||    
T  26383532 ctctcttctccctatttgaagagaacttgaggcataaa 26383569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 240; Significance: 1e-133; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 135 - 452
Target Start/End: Original strand, 9935129 - 9935449
Alignment:
Q  135 cgtacacggcaatactctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcg 234  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |    
T  9935129 cgtacacgacaa-actctcttctccccatctgaagagaacttgaggcataaaggtaccgattgaggaagaaccaaatcagccgccgctaaatctattgtg 9935227  T
Q  235 tgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatcct 334  Q
    ||||||||||||||| || |||||||||| |||||||||||| ||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9935228 tgtttcagatcatctcctatctttggttaacgttgttgattagagggctgctatgaaagatttatccaggtattcctaataccctaattcttaatatcct 9935327  T
Q  335 tgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatct 431  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||    
T  9935328 tgataaatcaaacatgtcgtagatccgatcataatcatattcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatct 9935427  T
Q  432 g-ttttattaagacctaaattt 452  Q
    | ||||||||||||||||||||    
T  9935428 gtttttattaagacctaaattt 9935449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 135 - 452
Target Start/End: Original strand, 32896860 - 32897183
Alignment:
Q  135 cgtacacggcaatactct--cttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32896860 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 32896959  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     ||||||||||||||||  ||||||||||||| ||||||||| | |||| | |  |||||||||||||||||||||||||||||||||||||||||||||    
T  32896960 tgtgtttcagatcatctcatctctttggttattgttgttgatgagagggttgtcttgaaagctttatccaggtattcctaataccctaattcttaatatc 32897059  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaat 429  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||||||| |||||||||    
T  32897060 cttggtaaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaat 32897159  T
Q  430 ctgttt-tattaagacctaaattt 452  Q
    |||||| |||||||||||||||||    
T  32897160 ctgtttatattaagacctaaattt 32897183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 135 - 452
Target Start/End: Original strand, 32890736 - 32891059
Alignment:
Q  135 cgtacacggcaatactct--cttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32890736 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 32890835  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     ||||||||||||||||  ||||||||||||| ||||||||| | |||| |    |||||||||||||||||||||||||||||||||||||||||||||    
T  32890836 tgtgtttcagatcatctcatctctttggttattgttgttgatgagagggttgccttgaaagctttatccaggtattcctaataccctaattcttaatatc 32890935  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaat 429  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||||||| |||||||||    
T  32890936 cttggtaaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaat 32891035  T
Q  430 ctgttt-tattaagacctaaattt 452  Q
    |||||| |||||||||||||||||    
T  32891036 ctgtttatattaagacctaaattt 32891059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 149 - 452
Target Start/End: Original strand, 14417804 - 14418108
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  14417804 ctctcttctccccatctgaagagaacttgaggcataaacgtaccggttgaggaagaaccaaatcagccgccgctaaaactattgtgtgtttcagatcatc 14417903  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    ||||||||||||||||||| |||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14417904 ttctctctttggttatcgtcgttgattagagggctgctatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 14418003  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgctaattcataattgttgaacatgttttatgaaatctg-ttttattaagaccta 447  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |   | || ||| |||||||||||||||||||| |||||||||||||||    
T  14418004 tgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcatagttaaacatgttttatgaaatctgtttttattaagaccta 14418103  T
Q  448 aattt 452  Q
    |||||    
T  14418104 aattt 14418108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 135 - 452
Target Start/End: Complemental strand, 5542472 - 5542149
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5542472 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 5542373  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||||| | |||||||||||||||||||||| | ||||||    ||||||||||||| |||||||||||||||||||||||||||||||    
T  5542372 tgtgtttcagatcatctcccctctttggttatcgttgttgatgagagggctgccttgaaagctttatctaggtattcctaataccctaattcttaatatc 5542273  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaat 429  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||||||| |||| ||||    
T  5542272 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattataaaat 5542173  T
Q  430 ctgttt-tattaagacctaaattt 452  Q
    || ||| |||||| ||||||||||    
T  5542172 ctatttatattaaaacctaaattt 5542149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 138 - 452
Target Start/End: Complemental strand, 42993309 - 42992992
Alignment:
Q  138 acacggcaatactctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgt 237  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  42993309 acacggcaatactct-ttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgt 42993211  T
Q  238 ttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttga 337  Q
    |||||||||||| |||||||||||||||||||||||| | ||||    ||  ||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  42993210 ttcagatcatctcctctctttggttatcgttgttgatgagagggtggctacaaaagctttatcaaggtattcctaataccctaattcttaatatc-ttga 42993112  T
Q  338 taaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgtt 434  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||||||| ||||||||||||||    
T  42993111 taaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtt 42993012  T
Q  435 tt--attaagacctaaattt 452  Q
    ||  ||||||||||||||||    
T  42993011 tttaattaagacctaaattt 42992992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 149 - 452
Target Start/End: Original strand, 36818835 - 36819141
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  36818835 ctctcttctccccatctgatgagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatc 36818934  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    | |||||||||||||||||||||||| | |||||   ||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  36818935 tcctctctttggttatcgttgttgatgagagggcggctacaaaagctttatccaggtattcctaataccctaattcttaatat-cttgataaatcaaaca 36819033  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttt-tattaagac 444  Q
    |||||||||||||||||||||||| |||||||||||| |||||||| |||   ||||||||||||||||||||| |||||| || ||||| |||||||||    
T  36819034 tgtcgtagatccgatcataatcatattcaatgttttgtttgcttccactattgattcataattgttgaacatgtattatgagatttgtttatattaagac 36819133  T
Q  445 ctaaattt 452  Q
    ||||||||    
T  36819134 ctaaattt 36819141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 135 - 452
Target Start/End: Original strand, 10705685 - 10706014
Alignment:
Q  135 cgtacacggcaatactct--cttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    |||||||| |||||||||  |||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10705685 cgtacacgacaatactctctcttctccccatctgaagagaacttaagccataaaggtaccggttgaggaagaatcaaatcagccgccgctaactctattg 10705784  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||||| |||||||||||||||||||||||| | ||||||  ||  ||||||||||||||||| ||||||||||||||||||||||||     
T  10705785 tgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgctacaaaagctttatccaggtaatcctaataccctaattcttaatat- 10705883  T
Q  333 cttgataaatcaaacatgtcgtagatccg------atcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgtttta 423  Q
    |||||||||||||||||||||||||||||      |||||||||||||||||||||||| |||||| |||||   ||| |  |||||| ||||||| |||    
T  10705884 cttgataaatcaaacatgtcgtagatccgatcataatcataatcatgttcaatgttttgtttgcttacgctattgatttacgattgttaaacatgtatta 10705983  T
Q  424 tgaaatctgtttt--attaagacctaaattt 452  Q
    |||||||||||||  ||||||||||||||||    
T  10705984 tgaaatctgtttttaattaagacctaaattt 10706014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 135 - 384
Target Start/End: Original strand, 10699877 - 10700127
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||||  |||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10699877 cgtacacggcaatactctctcttctctccatctgacgaaaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 10699976  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||| | |||||||||||||||||||||||| | ||||||  ||  |||| ||||||||| |||||||||||||||||||||||||||     
T  10699977 tgtgtttcagatcatttcctctctttggttatcgttgttgatgagagggctgctacaaaagttttatccagatattcctaataccctaattcttaatat- 10700075  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 384  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10700076 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 10700127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 135 - 451
Target Start/End: Complemental strand, 22220039 - 22219706
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  22220039 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccactaactttattg 22219940  T
Q  233 cgtgtttcagatcatcttctctctttggttatc----------gttgttgattaaagggctcttatgaaagctt-tatccaggtattcctaataccctaa 321  Q
      ||||||||||||  || | |||||| |||||          ||||||| | | ||||||   || |||||||  ||||||||||||||||||||||||    
T  22219939 tttgtttcagatca-attttttctttgtttatcgttgttgttggttgttgttgagagggctgccatcaaagcttcaatccaggtattcctaataccctaa 22219841  T
Q  322 ttcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt-ggttgcttccgcta---attcataattgttgaacat 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||   || |||| ||||   |||||||| | ||||||||    
T  22219840 ttcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaaagttttctttttcttctgctattgattcataactattgaacat 22219741  T
Q  418 gttttatgaaatct-gttttattaagacctaaatt 451  Q
    ||||||||||||||  |||||||||||||||||||    
T  22219740 gttttatgaaatctctttttattaagacctaaatt 22219706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 149 - 436
Target Start/End: Complemental strand, 39735844 - 39735558
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactcta-ttgcgtgtttcagatcat 247  Q
    ||||||||||||||||||||||| |||||||||||||| ||||| ||| |||||||| ||||||||||||||||||| ||  |||  ||||||||||||     
T  39735844 ctctcttctccccatctgaagagtacttgaggcataaatgtaccagttaaggaagaatcaaatcagccgccgctaacccttgttgtttgtttcagatcac 39735745  T
Q  248 cttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaac 347  Q
    |||||||||||    | |||||||| | | |||| |   ||||||  ||||||||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  39735744 cttctctcttt----accgttgttgttgagagggttgccatgaaat-tttatccaggtattccttataccctagttcttaatatctttgataaatcaaac 39735650  T
Q  348 atgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgtttt 436  Q
    ||||||||||| | |||||||||||||||||| ||||  || |||||||||   ||||||||||||||||||||||||||||||||| ||||    
T  39735649 atgtcgtagatacaatcataatcatgttcaatattttatttacttccgctattgattcataattgttgaacatgttttatgaaatctatttt 39735558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 255 - 452
Target Start/End: Original strand, 7771202 - 7771402
Alignment:
Q  255 ctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgt 354  Q
    |||||||||||||||||||| | |||| |  ||  ||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  7771202 ctttggttatcgttgttgatgagagggttgctacaaaagctt-atccaggtattcttaataccctaattcttaatatccttggtaaatcaaacatgtcgt 7771300  T
Q  355 agatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttt-tattaagacctaaat 450  Q
    ||||||||||||||||||||||||||||||| ||||||||||||   ||| ||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  7771301 agatccgatcataatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgtattatgaaatctgtttatattaagacctaaat 7771400  T
Q  451 tt 452  Q
    ||    
T  7771401 tt 7771402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 149 - 452
Target Start/End: Complemental strand, 39727604 - 39727306
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactc-tattgcgtgtttcagatcat 247  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |  ||  ||||||||||||     
T  39727604 ctctcttctccccatctcaagagtacttgaggcataaaggtaccggttgaggaagaaccaaatcagcagccgctaacccttgctgtttgtttcagatcac 39727505  T
Q  248 cttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaac 347  Q
    |||||||||    ||| |||||||| | | |||| |   | ||||| ||| |||||||||| || |||||||||||||||||||||||||||||||||||    
T  39727504 cttctctct----ttaccgttgttgttgagagggttgccaagaaagttttttccaggtatttcttataccctaattcttaatatccttgataaatcaaac 39727409  T
Q  348 atgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgtt----ttatta 440  Q
    ||||         ||||||||||||||||||||||||| ||||||||| ||   ||||||||||||||||||||||||||||||||| ||    ||||||    
T  39727408 atgt---------gatcataatcatgttcaatgttttgtttgcttccgttattgattcataattgttgaacatgttttatgaaatctatttttattatta 39727318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 296 - 452
Target Start/End: Complemental strand, 14799564 - 14799405
Alignment:
Q  296 ttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccg 395  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14799564 ttatccaggtattcctaataccctaattcttaatatc-ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccg 14799466  T
Q  396 cta---attcataattgttgaacatgttttatgaaatctgttt-tattaagacctaaattt 452  Q
    |||   ||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||    
T  14799465 ctattgattcataattgttgaacatgtattatgaaatttgtttatattaagacctaaattt 14799405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 261 - 452
Target Start/End: Complemental strand, 1882939 - 1882740
Alignment:
Q  261 ttatcgttgttgattaaagggctcttatgaaagctttatc--caggtattcctaataccctaattcttaatatccttgataaatcaaacatgtc-gtaga 357  Q
    |||||||||||| | | ||||||   |||||||||| |||  |||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||    
T  1882939 ttatcgttgttgttgagagggctgccatgaaagcttcatctccaggtattcctaataccctaattcttaacatccttgataaatcaaacatgtcattaga 1882840  T
Q  358 tccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttt--tattaagacctaaattt 452  Q
    |||| ||||| ||||||||||||||||| ||||||||||||   |||| ||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  1882839 tccgttcatattcatgttcaatgttttgtttgcttccgctattgattcttaattgttgaacatgttctatgaaatctgttttatattaagacctaaattt 1882740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 42033664 - 42033740
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac 225  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42033664 ctctcttctctccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac 42033740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 1883114 - 1883039
Alignment:
Q  150 tctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac 225  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||    
T  1883114 tctcttctccccatctgaagagaacttgagacataaaggtactggttgaggaagaaccaaattagccgccgctaac 1883039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 354 - 453
Target Start/End: Original strand, 24250171 - 24250273
Alignment:
Q  354 tagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttttattaagacctaaat 450  Q
    |||||||||||||||| ||||||||| ||||| ||| ||||||||   ||||||| ||||| ||||||||||||||||| |||||| |||||||||||||    
T  24250171 tagatccgatcataataatgttcaatattttgtttgtttccgctattgattcatatttgttcaacatgttttatgaaatatgtttttttaagacctaaat 24250270  T
Q  451 ttt 453  Q
    |||    
T  24250271 ttt 24250273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 377 - 452
Target Start/End: Original strand, 1171414 - 1171492
Alignment:
Q  377 aatgttttggttgcttccgc---taattcataattgttgaacatgttttatgaaatctgttttattaagacctaaattt 452  Q
    ||||||||| ||||||||||   | | |||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  1171414 aatgttttgtttgcttccgcggttgaatcataattgttgaatatgtttcatgaaatctgttttattaagacctaaattt 1171492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 14417505 - 14417547
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  14417505 attattaagatatgtagcccaagtgggagattgttggaatatt 14417547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 355
Target Start/End: Original strand, 1171249 - 1171414
Alignment:
Q  189 taccggttgaggaagaaccaaatcagccgccgctaa-ctctattgcgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctctta 287  Q
    |||||||||||||||||||||||||||||||||||| |  | |||  ||||||||||||  |  ||||| || |||  |||| || | | || |||   |    
T  1171249 taccggttgaggaagaaccaaatcagccgccgctaaccgttgttgtttgtttcagatcacatcatctctctgtttactgttgctgttgagagagctgcca 1171348  T
Q  288 tgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgta 355  Q
    | ||||||||| |||||||||||||||| ||||||||||  ||| |||||||||||||| ||||||||    
T  1171349 taaaagctttaaccaggtattcctaata-cctaattcttgttat-cttgataaatcaaatatgtcgta 1171414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 5542777 - 5542735
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  5542777 attattaagatatgtcgcccaagtgggagattgttggaatatt 5542735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 22220342 - 22220300
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  22220342 attattaagatgtgtagcccaagtgggagattgttggaatatt 22220300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 10705382 - 10705422
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaata 49  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  10705382 attattaagatatgtagtccaagtgggagattgttggaata 10705422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 32896555 - 32896594
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaat 48  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  32896555 attattaagatatgtaacccaagtgggagattgttggaat 32896594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 39689782 - 39689828
Alignment:
Q  403 ataattgttgaacatgttttatgaaatctg-ttttattaagacctaa 448  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||    
T  39689782 ataattgttgaacatgttttatgaaatctgtttttattaaaacctaa 39689828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 39727902 - 39727858
Alignment:
Q  9 attattaagatatgtagcccaag--tgggagattgttggaatatt 51  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||    
T  39727902 attattaagatatgtagcccatgcgtgggagattgttggaatatt 39727858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 149 - 452
Target Start/End: Complemental strand, 12686475 - 12686168
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12686475 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatc 12686376  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    | |||||||||||||||||||||||| | ||||||    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12686375 tcctctctttggttatcgttgttgatgagagggctgccttgaaagctttatccaggtattcctaatagcctaattcttaatatccttgataaatcaaaca 12686276  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttt-tattaagac 444  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||   ||| ||||||||||||||||||||||||||||||||| ||| ||||     
T  12686275 tgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgttttatgaaatctgtttatatcaagag 12686176  T
Q  445 ctaaattt 452  Q
    ||||||||    
T  12686175 ctaaattt 12686168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 149 - 452
Target Start/End: Complemental strand, 12692577 - 12692270
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12692577 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatc 12692478  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    | |||||||||||||||||||||||| | ||||||    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12692477 tcctctctttggttatcgttgttgatgagagggctgccttgaaagctttatccaggtattcctaatagcctaattcttaatatccttgataaatcaaaca 12692378  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttt-tattaagac 444  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||   ||| ||||||||||||||||||||||||||||||||| ||| ||||     
T  12692377 tgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgttttatgaaatctgtttatatcaagag 12692278  T
Q  445 ctaaattt 452  Q
    ||||||||    
T  12692277 ctaaattt 12692270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 149 - 452
Target Start/End: Complemental strand, 28525682 - 28525375
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||| |||||||||||||||    
T  28525682 ctctcttctccccatctgaagagaacgtgaggcataaaggtaccggttgaggaagaatcaaatcagccaccgctgactctattgtgtgtttcagatcatc 28525583  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    | |||||||||||||||||||||||| | ||||||    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  28525582 tcctctctttggttatcgttgttgatgagagggctgccttgaaagctttatccaggtattcataataccctaattcttaatatccttaataaatcaaaca 28525483  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttt-tattaagac 444  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||||||| ||||||||||||||| |||||||||    
T  28525482 tgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttatattaagac 28525383  T
Q  445 ctaaattt 452  Q
    ||||||||    
T  28525382 ctaaattt 28525375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 149 - 452
Target Start/End: Complemental strand, 7389843 - 7389537
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  7389843 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagtcgccgctaactctattgtgtgtttcagatcatc 7389744  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    | |||||||||||||||||||||||| | || ||   ||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7389743 tcctctctttggttatcgttgttgatgagagagcggctacaaaagctttatccaggtattcctaataccctaattcttaatatc-ttgataaatcaaaca 7389645  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttt-tattaagac 444  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||||||| ||||||||| ||||| |||||||||    
T  7389644 tgtcgtggatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatttgtttatattaagac 7389545  T
Q  445 ctaaattt 452  Q
    ||||||||    
T  7389544 ctaaattt 7389537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 149 - 452
Target Start/End: Complemental strand, 28531778 - 28531471
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||| ||||| ||||||||| |||||||||||||||    
T  28531778 ctctcttctccccatctgaagagaacgtgaggcataaaggtactggttgaggaagaatcaaatcagccaccgctgactctattgtgtgtttcagatcatc 28531679  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    | |||||||||||||||||||||||| | ||||||    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  28531678 tcctctctttggttatcgttgttgatgagagggctgccttgaaagctttatccaggtattcataataccctaattcttaatatccttaataaatcaaaca 28531579  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttt-tattaagac 444  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||||||| ||||||||||||||| |||||||||    
T  28531578 tgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttatattaagac 28531479  T
Q  445 ctaaattt 452  Q
    ||||||||    
T  28531478 ctaaattt 28531471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 135 - 452
Target Start/End: Original strand, 41297127 - 41297447
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaact---tgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactcta 229  Q
    |||||||| |||||||||||  |||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41297127 cgtacacgacaatactctctcttctccccatctgaagagaactacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactcta 41297226  T
Q  230 ttgcgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaat 329  Q
    ||| ||||||||||||| || ||||| |||||||||||||||||| | |||| |    |||||||      |||||||||||||||||||||||||| ||    
T  41297227 ttgtgtgtttcagatcacctcctctccttggttatcgttgttgatgagagggttgccttgaaagc------caggtattcctaataccctaattctttat 41297320  T
Q  330 atccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatga 426  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||   ||||||||||||||||||||| ||||||    
T  41297321 atccttgataaatcaaacatgtcgtagatccgatcataattatgttcaatgttttgtttgcttctgctattgattcataattgttgaacatgtattatga 41297420  T
Q  427 aatctgttt-tattaagacctaaattt 452  Q
    ||||| ||| |||||||||| ||||||    
T  41297421 aatctctttatattaagacccaaattt 41297447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 150 - 452
Target Start/End: Complemental strand, 30384681 - 30384365
Alignment:
Q  150 tctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaa-ctctattgcgtgtttcagat---- 244  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| || | ||| |||||||||||        
T  30384681 tctcttctccccatctgaagagaactcgaggtataaaggtaccggttgaggaagaaccaaatcagtcgccgctaagctatgttgtgtgtttcagattaga 30384582  T
Q  245 -catcttctctctttggtt---atcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataa 340  Q
     ||||| ||||| ||| ||   ||||||| ||   | || | | | | |||||||| |||||||||||| ||||||||| ||||||||||||||||||||    
T  30384581 tcatctcctctccttgttttagatcgttgatggcgagagagttgtcacgaaagcttcatccaggtattcttaatacccttattcttaatatccttgataa 30384482  T
Q  341 atcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctg---tt 434  Q
    |||| ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||   ||||||||||||||||||||||||||||||||||   ||    
T  30384481 atcagacatgtc-tagatccgatcataatcgtgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgttttt 30384383  T
Q  435 ttattaagacctaaattt 452  Q
    ||||||| ||||||||||    
T  30384382 ttattaaaacctaaattt 30384365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 149 - 452
Target Start/End: Original strand, 30772145 - 30772454
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctat--tgcgtgtttcagatca 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |  || |||||||||||||    
T  30772145 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaatcaaatcagccgccgctaaccctttgttgtgtgtttcagatca 30772244  T
Q  247 tc-----ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaa 341  Q
    ||     ||||||   || |||| ||||||||    ||||||   || ||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30772245 tcacaccttctct---tgtttattgttgttgag---agggctgccataaaaactttatccaggtaatcctaataccctaattcttaatatccttgataaa 30772338  T
Q  342 tcaaacatgtcgtagatccgatcataatcatgttcaatgttttggtt-gcttccgcta---attcataattgttgaacatgttttatgaaatct-gtttt 436  Q
    |||||||||| || |||||||||||||||||||||| |||||| ||| |||||| ||    |||||||||| |||||||||||||||||||| |  ||||    
T  30772339 tcaaacatgttgtcgatccgatcataatcatgttcattgtttttgtttgcttccactgtttattcataattattgaacatgttttatgaaatttattttt 30772438  T
Q  437 attaagacctaaattt 452  Q
    ||||||| ||||||||    
T  30772439 attaagaactaaattt 30772454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 135 - 302
Target Start/End: Complemental strand, 32094533 - 32094364
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    |||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  32094533 cgtacacgacaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaattagccgccgctaactctattg 32094434  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatcca 302  Q
     ||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||| |||||||||    
T  32094433 tgtgtttcagatcatcttctctctttggttattgttgttgattaaagggctgctatgaaacctttatcca 32094364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 135 - 302
Target Start/End: Complemental strand, 32097334 - 32097165
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32097334 cgtacacggaaatactctctattctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaactaaatcagccgccgctaactctattg 32097235  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatcca 302  Q
     ||||||||||||||||  ||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  32097234 tgtgtttcagatcatctcatctctttggttatcgttgttgattaaagggctgctatgaaagctttatcca 32097165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 287 - 449
Target Start/End: Original strand, 24054335 - 24054502
Alignment:
Q  287 atgaaagctttatccaggtattcctaata-ccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttg 385  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24054335 atgaaagctttatccaggtattcctaatatcccaaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttg 24054434  T
Q  386 gttgcttccgcta---attcataattgttgaacatgttttatgaaatctg-ttttattaagacctaaa 449  Q
     ||||||||||||   ||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  24054435 tttgcttccgctatagatttataattgttgaacatgttttatgaaatctgtttttattaagacctaaa 24054502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 149 - 452
Target Start/End: Complemental strand, 19066408 - 19066096
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcg-------tgtttca 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||  | |||         |||||||    
T  19066408 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaatcaaatcagctgccgctaaccgtgttgatgtgggtttgtttca 19066309  T
Q  242 gatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatc--caggtattcctaataccctaattcttaatatccttgata 339  Q
    |||||  ||||||||||    ||||||||||   | || |||   |  ||||||| |||  | ||||||||||||||| |||||||||||||||||||||    
T  19066308 gatcactttctctcttt----atcgttgttgtcgagagagctgccaccaaagcttcatctcctggtattcctaataccataattcttaatatccttgata 19066213  T
Q  340 aatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctg-ttt 435  Q
    |||||||||||||||||||||| ||||| ||||| | ||||||||| ||||||||||||   ||| ||||| |||||||||| |||||||||| || |||    
T  19066212 aatcaaacatgtcgtagatccgttcatattcatgcttaatgttttgtttgcttccgctaatgatttataatcgttgaacatggtttatgaaatatgtttt 19066113  T
Q  436 tattaagacctaaattt 452  Q
    ||||||||| |||||||    
T  19066112 tattaagacttaaattt 19066096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 264 - 452
Target Start/End: Complemental strand, 32094340 - 32094148
Alignment:
Q  264 tcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgat 363  Q
    ||||||||| | | ||||||  |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  32094340 tcgttgttgttgagagggctgctatgaaagctttattcaggtattcctaatacc-taattcttaatatccttgataaatcaaacatgtcgtagatcctat 32094242  T
Q  364 cataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgtttt--attaagacctaaattt 452  Q
    |||||||||||||||||||||| ||||||||||||   ||| |  |||||||||||||| |||| |||||||||||  ||||||||||||||||    
T  32094241 cataatcatgttcaatgttttgtttgcttccgctattgatttacgattgttgaacatgtattataaaatctgtttttaattaagacctaaattt 32094148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 135 - 379
Target Start/End: Original strand, 20499986 - 20500231
Alignment:
Q  135 cgtacacggcaatactctct--tctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    |||||||||||| |||||||  |||| |||| |||||||||||||||||||||| ||||||||| |||||||||||||||| |||| ||||||  | |||    
T  20499986 cgtacacggcaaaactctctgttctctccatttgaagagaacttgaggcataaatgtaccggttaaggaagaaccaaatcaaccgctgctaaccttcttg 20500085  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
      |||||||||||  ||| ||||| || ||||||||| || | | ||||||   || |||| |||||||||||||| ||||||| |||||||||| ||||    
T  20500086 tttgtttcagatcgcctt-tctctctgtttatcgttgatgttgagagggctgccataaaagttttatccaggtatttctaatactctaattcttagtatc 20500184  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaat 379  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||    
T  20500185 cttgataaatcaagtatgtcgtagatccgatcataatcatgttcaat 20500231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 286 - 452
Target Start/End: Complemental strand, 32097119 - 32096949
Alignment:
Q  286 tatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttg 385  Q
    |||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32097119 tatgaaagctttattcaggtaatcctaatacc-taattcttaatatccttgataaatcaaacatgtcgtagatcctatcataatcatgttcaatgttttg 32097021  T
Q  386 gttgcttccgcta---attcataattgttgaacatgttttatgaaatctgtttt--attaagacctaaattt 452  Q
     ||||||||||||   ||| |  |||||||||||||| ||||||||||||||||  ||||||||||||||||    
T  32097020 tttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgtttttaattaagacctaaattt 32096949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 149 - 452
Target Start/End: Complemental strand, 19060067 - 19059753
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcg---------tgttt 239  Q
    |||||||||||| || |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||  | |||           |||||    
T  19060067 ctctcttctcccgatatgaagagaacttgaggcataaaagtaccagttgaggaagaaccaaatcagccgccgctaaccgtgttgatgtggatgtttgttt 19059968  T
Q  240 cagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatc--caggtattcctaataccctaattcttaatatccttga 337  Q
    ||||||| |||||||||||    ||||||||||   | ||||||   |  ||||||| |||  |||||||| ||||||||||||||||||||||||||||    
T  19059967 cagatcaccttctctcttt----atcgttgttgtcgagagggctgccaccaaagcttcatctccaggtatttctaataccctaattcttaatatccttga 19059872  T
Q  338 taaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctg-t 433  Q
    |||||||||||||||||||||||| | ||| ||||||| ||| ||||| |||||||| |||   ||| ||||| |||||| | |||||||||||| || |    
T  19059871 taaatcaaacatgtcgtagatccgtttatattcatgtttaatattttgtttgcttcccctaatgatttataatcgttgaatacgttttatgaaatatgtt 19059772  T
Q  434 tttattaagacctaaattt 452  Q
    |||||||||||||||||||    
T  19059771 tttattaagacctaaattt 19059753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 310 - 452
Target Start/End: Complemental strand, 16215309 - 16215163
Alignment:
Q  310 ctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataa 406  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||| ||||||||||||   ||||||||    
T  16215309 ctaataccctaatttttaatatccttgataaatcaaacatttcgtagatccaatcataatcatgttaaatgttttgtttgcttccgctattgattcataa 16215210  T
Q  407 ttgttgaacatgttttatgaaatctg-ttttattaagacctaaattt 452  Q
    |||||||| |||| |||||||||||| |||||| |||||||||||||    
T  16215209 ttgttgaatatgtgttatgaaatctgtttttataaagacctaaattt 16215163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 321 - 453
Target Start/End: Original strand, 14610184 - 14610322
Alignment:
Q  321 attcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgc---taattcataattgttgaacat 417  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||  ||||||||||   |||||||||||||||||||||    
T  14610184 attcttaatatccttgataaatcaaacatgtcgtaaatccgatcataatcatgttcaatggtttatttgcttccgctattaattcataattgttgaacat 14610283  T
Q  418 gttttatgaaatctg---ttttattaagacctaaatttt 453  Q
    |||||||||||||||   |||| ||||||||||||||||    
T  14610284 gttttatgaaatctgtttttttgttaagacctaaatttt 14610322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 154 - 258
Target Start/End: Original strand, 14610037 - 14610141
Alignment:
Q  154 ttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatcttctc 253  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| || |||  ||||||||||||||| |||    
T  14610037 ttctccccatctgaagagaactttaggcataaaagtaccggttgaggaagaaccaaatcagccgccgctaacccttttgtttgtttcagatcatctcctc 14610136  T
Q  254 tcttt 258  Q
    |||||    
T  14610137 tcttt 14610141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 160 - 436
Target Start/End: Original strand, 26509722 - 26510000
Alignment:
Q  160 ccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctat--tgcgtgtttcagatc---atcttctc- 253  Q
    |||||||| ||||||| ||||||||||||||||| ||||||||| | ||||||||||||| |  |||||||  || || |||||||||   || |||||     
T  26509722 ccatctgatgagaactagaggcataaaggtaccgattgaggaagtatcaaatcagccgccaccgactctatgttgtgtatttcagatcgcgat-ttctcc 26509820  T
Q  254 tctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcg 353  Q
    |||||    ||||||| || | | ||| || | || ||||||| || ||  ||||||||||||| |||||||||||||| ||||| ||||||| ||||||    
T  26509821 tctttcag-atcgttgatgttgagaggactgtcatcaaagcttcattcatatattcctaatacc-taattcttaatatc-ttgatgaatcaaatatgtcg 26509917  T
Q  354 tagatccgatcataatcatgttcaatgttttggttgcttccgctaattcataattgttgaacatgttttatgaaatctgtttt 436  Q
    ||| |   |||||||| ||||||||||||||| |||||||| ||| ||||||||  |||||||||||||||||||||||||||    
T  26509918 tagtttatatcataattatgttcaatgttttgtttgcttccactatttcataatgattgaacatgttttatgaaatctgtttt 26510000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 317 - 384
Target Start/End: Original strand, 28542269 - 28542336
Alignment:
Q  317 cctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 384  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  28542269 cctaattcttaatatccttgataaatcaaacatgtcgtagtttcgatcataatcatgttcaatgtttt 28542336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 315 - 436
Target Start/End: Complemental strand, 26316922 - 26316798
Alignment:
Q  315 accctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgc---taattcataattgtt 411  Q
    ||||||||| |||||| | | ||||||||||||||||| ||||||| |||||| | ||||||||||||||  |||||||| |   ||||| | |||| ||    
T  26316922 accctaattattaataccgtagataaatcaaacatgtcctagatccaatcatattaatgttcaatgttttttttgcttccactattaatttaaaattatt 26316823  T
Q  412 gaacatgttttatgaaatctgtttt 436  Q
    |||||||||||||||||| ||||||    
T  26316822 gaacatgttttatgaaatatgtttt 26316798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 320 - 378
Target Start/End: Complemental strand, 37896423 - 37896365
Alignment:
Q  320 aattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaa 378  Q
    |||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  37896423 aattattaatattcttgataaatcaatcatgtcgtagatccgatcataatcatgttcaa 37896365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 28526001 - 28525959
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  28526001 attattaagatatgtagcccaagtgggagattgttggaatatt 28525959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 32094838 - 32094796
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  32094838 attattaagatatgtagcccaagtgggagattgttggaatatt 32094796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 41296823 - 41296865
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  41296823 attattaagatatgtagcccaagtgggagattgttggaatatt 41296865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 397 - 452
Target Start/End: Complemental strand, 8706510 - 8706454
Alignment:
Q  397 taattcataattgttgaacatgttttatgaaatct-gttttattaagacctaaattt 452  Q
    ||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||    
T  8706510 taattcataattgttgaacatattttatgaaatctatttttattaagacctaaattt 8706454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 335
Target Start/End: Complemental strand, 8706672 - 8706532
Alignment:
Q  192 cggttgaggaagaaccaaatcagccgccgctaac----tctattgcgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctctta 287  Q
    |||||||||||||||||||||||||| |||||||    || |||   ||||||||||||||| |||||||| ||    |||| || | | | || | | |    
T  8706672 cggttgaggaagaaccaaatcagccgtcgctaaccccttcaatt---tgtttcagatcatctcctctctttcgt----gttgctgttgagatggttgtca 8706580  T
Q  288 tgaaagctttatccaggtattcctaataccctaattcttaatatcctt 335  Q
    ||||||| | || |||||||||||||||||||||||||||||||||||    
T  8706579 tgaaagcataattcaggtattcctaataccctaattcttaatatcctt 8706532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 12686805 - 12686763
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  12686805 attattaagatatgtaacccaagtgggagattgttggaatatt 12686763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 30771825 - 30771867
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  30771825 attattaagatatgtagcccaagtgagagattgttggaatatt 30771867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 26318555 - 26318492
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatca 213  Q
    |||||||||||| |||||||||||||||  || ||||| |||||||||||| |||||||||||||    
T  26318555 ctctcttctccc-atctgaagagaacttatggtataaatgtaccggttgagaaagaaccaaatca 26318492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 19060389 - 19060348
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    ||||||||||||||||||||||||||||| |||||| ||||||    
T  19060389 attattaagatatgtagcccaagtgggag-ttgttgaaatatt 19060348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 26509401 - 26509443
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||| ||||| ||||| ||||||||||||||||||    
T  26509401 attattaagataagtagcacaagtaggagattgttggaatatt 26509443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 233; Significance: 1e-128; HSPs: 2)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 149 - 452
Target Start/End: Complemental strand, 915 - 611
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  915 ctctcttctccccatctgaagagaacttgaggcataaacgtaccggttgaggaagaaccaaatcagccgccgctaaaactattgtgtgtttcagatcatc 816  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    ||||||||||||||||||| |||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  815 ttctctctttggttatcgtcgttgattagagggctgctatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 716  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgctaattcataattgttgaacatgttttatgaaatctg-ttttattaagaccta 447  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |   | || ||| |||||||||||||||||||| |||||||||||||||    
T  715 tgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcatagttaaacatgttttatgaaatctgtttttattaagaccta 616  T
Q  448 aattt 452  Q
    |||||    
T  615 aattt 611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 1214 - 1172
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  1214 attattaagatatgtagcccaagtgggagattgttggaatatt 1172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 149 - 453
Target Start/End: Complemental strand, 173186 - 172878
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  173186 ctctcttctccccatctgaagagaacttgaggcataaaggtactggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatc 173087  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    |||||||||||||||||||||||||| | |||||| |  ||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||    
T  173086 ttctctctttggttatcgttgttgataagagggctatcttgaaagctttatccatgtattcctaatatcctaattcttaatatccttgataaattaaaca 172987  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctgttt-tattaagac 444  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||   |||||||||||| ||||||||||||||||| |||||| |||||||||    
T  172986 tgtcgtagatccgatcataatcattttcaatgttttgtttgcttccgctattgattcataattgtagaacatgttttatgaaacctgtttatattaagac 172887  T
Q  445 ctaaatttt 453  Q
    |||||||||    
T  172886 ctaaatttt 172878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 149 - 452
Target Start/End: Complemental strand, 1490 - 1182
Alignment:
Q  149 ctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatc 248  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||    
T  1490 ctctcttctccccatctgaagagaacttgaggcataaatgtaccggttgaggaaaaaccaaatcagtcgccgctaactctattgtgtgtttcagatcatc 1391  T
Q  249 ttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 348  Q
    | |||||||||||||||||||||||| | |||| |    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1390 tcctctctttggttatcgttgttgatgagagggatgccttgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaaca 1291  T
Q  349 tgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgc---taattcataattgttgaacatgttttatgaaatctgtttt--attaaga 443  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||   | ||||||||||||||||||||||||||||||||||||||  |||||||    
T  1290 tatcgtagatccgatcataatcatgttcaatgttttgtttgcttccgcctttgattcataattgttgaacatgttttatgaaatctgtttttaattaaga 1191  T
Q  444 cctaaattt 452  Q
    |||||||||    
T  1190 cctaaattt 1182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 212; Significance: 1e-116; HSPs: 3)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 135 - 452
Target Start/End: Original strand, 6370 - 6693
Alignment:
Q  135 cgtacacggcaatactct--cttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6370 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 6469  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||||| |||||||||||||||||||||||| | ||||||    |||||||||||||||||||||||||||| ||||||||||||||||    
T  6470 tgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgccttgaaagctttatccaggtattcctaatagcctaattcttaatatc 6569  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcat-aattgttgaacatgttttatgaaa 428  Q
    ||||||||||||||||||| |||||| |  ||||||||||||||||||||||| ||||||||||||   |||||| |||||||||||||| |||||||||    
T  6570 cttgataaatcaaacatgttgtagattcagtcataatcatgttcaatgttttgtttgcttccgctattgattcataaattgttgaacatggtttatgaaa 6669  T
Q  429 tctgttt-tattaagacctaaattt 452  Q
    | ||||| |||||||| ||||||||    
T  6670 t-tgtttatattaagagctaaattt 6693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 135 - 452
Target Start/End: Original strand, 12243 - 12566
Alignment:
Q  135 cgtacacggcaatactct--cttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 232  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12243 cgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattg 12342  T
Q  233 cgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatc 332  Q
     |||||||||||||||| |||||||||||||||||||||||| | ||| ||    |||||||||||||||| ||||||||||| ||||||||||||||||    
T  12343 tgtgtttcagatcatctcctctctttggttatcgttgttgatgagaggactgccttgaaagctttatccagatattcctaatagcctaattcttaatatc 12442  T
Q  333 cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcat-aattgttgaacatgttttatgaaa 428  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||  ||||||||||||   |||||| |||||||||| ||| |||||||||    
T  12443 cttgataaatcaaacatgtcgtagattcgatcataattatgttcaatgttttatttgcttccgctattgattcataaattgttgaatatggtttatgaaa 12542  T
Q  429 tctgttt-tattaagacctaaattt 452  Q
    | ||||| |||||||| ||||||||    
T  12543 t-tgtttatattaagagctaaattt 12566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 11928 - 11970
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  11928 attattaagatatgtaacccaagtgggagattgttggaatatt 11970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 171; Significance: 1e-91; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 216 - 452
Target Start/End: Original strand, 5465 - 5705
Alignment:
Q  216 cgccgctaactctattgcgtgtttcagatcatcttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaata 315  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| | ||||||    ||||||||||||||||||||||||||||    
T  5465 cgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgccttgaaagctttatccaggtattcctaata 5564  T
Q  316 ccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttg 412  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||    
T  5565 gcctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttg 5664  T
Q  413 aacatgttttatgaaatctgttt-tattaagacctaaattt 452  Q
    ||||||||||||||||||||||| ||| |||| ||||||||    
T  5665 aacatgttttatgaaatctgtttatatcaagagctaaattt 5705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1114 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold1114
Description:

Target: scaffold1114; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 152 - 452
Target Start/End: Original strand, 950 - 1255
Alignment:
Q  152 tcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactc-tattgcgtgtttcagatcat--- 247  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| | |  || ||||||| ||||||       
T  950 tcttctccccatctgaagagaacttgaggcataaagataacggttgaggaagaaccaaatcagccgccactaacccttggtgtgtgtttccgatcatcac 1049  T
Q  248 --cttctctctttggttatcgttgttgattaaagggctcttatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaa 345  Q
      |||||||  ||  |||| |||| || | | || |||   ||||||| ||||||||| |||| ||||||| |||||| ||||||| | |||||| ||||    
T  1050 accttctcttgtt--ttattgttgatgttgagagagctgccatgaaagttttatccagatatttctaatactctaattgttaatatgcatgataagtcaa 1147  T
Q  346 acatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attcataattgttgaacatgttttatgaaatctg-ttttattaa 441  Q
    ||||||||| ||||||||||||||||| |  ||    ||| |||||| || ||   ||||||||| |||||||||||||||||||||||| |||||||||    
T  1148 acatgtcgttgatccgatcataatcatatctaa---attgtttgctttcgatattgattcataatggttgaacatgttttatgaaatctgtttttattaa 1244  T
Q  442 gacctaaattt 452  Q
    || || |||||    
T  1245 gatctgaattt 1255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 290 - 394
Target Start/End: Original strand, 38434 - 38536
Alignment:
Q  290 aaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttg 389  Q
    ||||||| |||||||||||||||||||| ||||| ||||||| ||||||||| ||||||||| ||||||||||||||||  ||||||||||||||| |||    
T  38434 aaagcttcatccaggtattcctaatacc-taattattaatattcttgataaa-caaacatgttgtagatccgatcataactatgttcaatgttttgtttg 38531  T
Q  390 cttcc 394  Q
    |||||    
T  38532 cttcc 38536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 38289 - 38347
Alignment:
Q  148 actctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaac 206  Q
    ||||| |||| ||||||||||||||||||||| |||||||||| | |||||||||||||    
T  38289 actctattcttcccatctgaagagaacttgagacataaaggtatcagttgaggaagaac 38347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 307 - 421
Target Start/End: Original strand, 5945 - 6061
Alignment:
Q  307 ttcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttggttgcttccgcta---attca 403  Q
    ||||||||||| |||||  ||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||  | ||||||   ||| |    
T  5945 ttcctaatacc-taattaataatatttttgataaatcaaacatgtcgtagatccgatcatattcatgttcaatgttttgtttaatgccgctattgattaa 6043  T
Q  404 taattgttgaacatgttt 421  Q
    ||||| ||||||||||||    
T  6044 taattattgaacatgttt 6061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 230
Target Start/End: Original strand, 5826 - 5889
Alignment:
Q  167 aagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctat 230  Q
    |||| ||||||||||||||| |||||||||||||||||||||||| || || ||||||| ||||    
T  5826 aagataacttgaggcataaatgtaccggttgaggaagaaccaaattagtcgtcgctaaccctat 5889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 13816 - 13858
Alignment:
Q  9 attattaagatatgtagcccaagtgggagattgttggaatatt 51  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  13816 attattaagatatgtagcccaagtgggggattgttggaatatt 13858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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