View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8048_low_14 (Length: 283)
Name: NF8048_low_14
Description: NF8048
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8048_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 16 - 265
Target Start/End: Complemental strand, 47726271 - 47726022
Alignment:
| Q |
16 |
ctttcatgccatgattgggtaggttcacaatttcaccatttttgaatttaagtagtctatgtgatgatgttacaagaaaaataccctttacttaatgatt |
115 |
Q |
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| T |
47726271 |
ctttcatgccatgattgggtaggttcacaatttcaccatttttgaatttaagtagtctatgtgatgatgttacaagaaaaataccctttacttaatgatt |
47726172 |
T |
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| Q |
116 |
cagggaccaagagtttcatatgctaatcctaaactcttcaagcacttcatcagagcactctgcaatgccaacacttcagaaggattttggcctaacagag |
215 |
Q |
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| T |
47726171 |
cagggaccaagagtttcatatgctaatcctaaactcttcaagcacttcatcagagcactctgcaatgccaacacttcagaaggattttggcctaacagag |
47726072 |
T |
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| Q |
216 |
atgtgtccatccctcaattgaatttgcctgttggaaagcttggcccacct |
265 |
Q |
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| T |
47726071 |
atgtgtccatccctcaattgaatttgcctgttggaaagcttggcccacct |
47726022 |
T |
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