View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8049_high_4 (Length: 245)
Name: NF8049_high_4
Description: NF8049
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8049_high_4 |
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Alignment Details
Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 26411150 - 26410921
Alignment:
| Q |
1 |
taatcaaaacaaaacatataatataagattgagatagtaaaactaaaatattcttctcaccgaaagcacttttttcaaaacatcctttcatcactctcta |
100 |
Q |
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| T |
26411150 |
taatcaaaacaaaacatataatataagattgagatagtaaaactaaaatattcttctcaccgaaagcacttttttcaaaacatcctttcatcactctcta |
26411051 |
T |
|
| Q |
101 |
atcacacaatcacacaatttagtaaagtaaatcaataaattaaagacaaaaaacagaactaaccaggagcatcaatctcaggcataacacgaacaccacg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |
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| T |
26411050 |
atcacacaatcacacaatttagtaaagtaaatcaataaattaaagacaaaaaacagaactaaccaggagcatcgatctcagggataacacgaacaccacg |
26410951 |
T |
|
| Q |
201 |
atcaagcccaaattcaacaacccttttaac |
230 |
Q |
| |
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|||||||||||||||||||||||||||||| |
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| T |
26410950 |
atcaagcccaaattcaacaacccttttaac |
26410921 |
T |
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