View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8050_high_27 (Length: 211)
Name: NF8050_high_27
Description: NF8050
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8050_high_27 |
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Alignment Details
Target: chr2 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 22 - 197
Target Start/End: Original strand, 13591067 - 13591242
Alignment:
| Q |
22 |
agagagagcattctctatcgatatttttccagnnnnnnncatggctaccgtcaacaaccaccagcacaactccgatcacagcacatacaccgtcaacatg |
121 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13591067 |
agagagagcattctctatcgatatttttccagaaaaaaacatggctaccgtcaacaaccaccagcacaactccgatcacagcacatacaccgtcaacatg |
13591166 |
T |
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| Q |
122 |
cacggaagcaagataaccgtgactgttacagccttcgcctccatagtggaaaactggatcaaaacaacattcatct |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13591167 |
cacggaagcaagataaccgtgactgttacagccttcgcctccatagtggaaaactggatcaaaacaacattcatct |
13591242 |
T |
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