View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8053_high_9 (Length: 252)
Name: NF8053_high_9
Description: NF8053
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8053_high_9 |
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Alignment Details
Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 43763170 - 43763399
Alignment:
| Q |
1 |
ctctatcctcgtttcttcatttactaagcttgtagccactcccaaaacactctctccgtaaacctcaaatgacacaaccattgcttttgctccttaaaaa |
100 |
Q |
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| T |
43763170 |
ctctatcctcgtttcttcatttactaagcttgtagccactcccaaaacactctctccataaacctcaaatgacacaaccattgcttttgctccttaaaaa |
43763269 |
T |
|
| Q |
101 |
acacaatacccttctttcttcaccaacgttgtcaatgtgtgcagacatgtctaataataatcctccttctacttctaaagccaaagacttctttccctct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43763270 |
acacaatacccttctttcttcaccaacgttgtcaatgtgtgcagacatgtctaataataatcctccttctacttctaaagccaaagacttctttccctct |
43763369 |
T |
|
| Q |
201 |
ccagctctctctcttagccttgtaagtcct |
230 |
Q |
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|||||||||||||||||||| ||||||||| |
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| T |
43763370 |
ccagctctctctcttagcctagtaagtcct |
43763399 |
T |
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