View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8053_low_8 (Length: 313)
Name: NF8053_low_8
Description: NF8053
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8053_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 14 - 280
Target Start/End: Complemental strand, 1908679 - 1908417
Alignment:
| Q |
14 |
aaatcatcatataaatgatgcattaacatgaaggaacatatcaacttattcagaaaaacatgaacacaaaagtaaatattaaaaactaaacacgaagctc |
113 |
Q |
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| T |
1908679 |
aaatcatcatataaatgatgcattaacatgaaggaacatatcaacttattcagaaaaacatgaacacaaaagtaaatattaaaaactaaacacgaagctc |
1908580 |
T |
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| Q |
114 |
taaagaacgaagcgtatgttaagcctattaataaatcatgaagctctaaagaatgaagcatggaaggttggaatgacagaagaagtagaaactattgaaa |
213 |
Q |
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| T |
1908579 |
taaagaa----gcatatgttaagcctattgataaatcatgaagctctaaagaatgaagcatggaaggttggaatgacagaagaagtagaaactattgaaa |
1908484 |
T |
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| Q |
214 |
ggaacaatacatggaaacttagggtgtataagtcgaacaaattatactattgaactatgtagtataa |
280 |
Q |
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| T |
1908483 |
ggaacaatacatggaaacttagggtgtataagtcgaacaaattatactattgaactatgtagtataa |
1908417 |
T |
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