View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8057_low_15 (Length: 225)
Name: NF8057_low_15
Description: NF8057
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8057_low_15 |
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Alignment Details
Target: chr6 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 15 - 183
Target Start/End: Complemental strand, 9058517 - 9058349
Alignment:
| Q |
15 |
aatatacttgtaacataccttaccatatattagagcttgcaaaataatgcagctcaatatgattgtacaaagagttnnnnnnnngtgccgctatcaacat |
114 |
Q |
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| T |
9058517 |
aatatacttgtaacataccttaccatatattagagcttgcaaaataatgcagctcaatatgattgtacaaagagttaaaaaaaagtgccgctatcaacat |
9058418 |
T |
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| Q |
115 |
tatatttggtccgagtggaattggatttaaaccttttaaacaaggtatttgggtcgagttttatggatg |
183 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |
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| T |
9058417 |
tatatttggtccgagtggaattggatttgaaccttttaaacaaggtatctgggtcgagttttatggatg |
9058349 |
T |
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