View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8057_low_4 (Length: 602)
Name: NF8057_low_4
Description: NF8057
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8057_low_4 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 377; Significance: 0; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 7 - 543
Target Start/End: Complemental strand, 14749125 - 14748589
Alignment:
| Q |
7 |
agttaaatgtctccacctatcaaatgtgtgtactcatgctatttaataatgctgatagactaagctacaaggaaattgagcaagcaactgagattccagc |
106 |
Q |
| |
|
|||||||||| || |||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
14749125 |
agttaaatgtttctacctatcaaatgtgtgtactcatgctgtttaataatgctgataggctaagctacagggaaattgagcaagcaaccgagattccagc |
14749026 |
T |
|
| Q |
107 |
ttcagatttaaagaggtgcctgcaatctttggctttggttaagggaagaaatgtccttaggaaggagcctatgagtaaatatgttagtaagaatgatgca |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||| |
|
|
| T |
14749025 |
ttcagatttgaagaggtgcctgcaatctttggctttggttaagggaagaaatgtccttaggaaggagcctatgagtaaagatgttagtgaggatgatgca |
14748926 |
T |
|
| Q |
207 |
ttctttgttaatgacaatttcagtagcaaactgtataagttaaaaataggaattgtatttgctcaaaaggaatctgaaccggagaaactgaaaactcaac |
306 |
Q |
| |
|
||| ||||||||||||| ||||||||||||||||||||| |||||||||||| |||| || ||||||||||||| |||||||||||||| |||| || | |
|
|
| T |
14748925 |
ttcattgttaatgacaaattcagtagcaaactgtataaggtaaaaataggaactgtagttactcaaaaggaatcggaaccggagaaactaaaaattcggc |
14748826 |
T |
|
| Q |
307 |
aaagacttgaggaggagcggaagccgcagattgaggcagcaatagcgaggattatgaaatctaggaagcaacttgatcacaacaatcttatagctgaggt |
406 |
Q |
| |
|
||||| | | |||||| | |||||| |||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
14748825 |
aaagagtggtggaggaccagaagccccagattgaagcagcaatagtgaggattatgaaatctaggaagcaacttgagcacaacaatcttatagctgaggt |
14748726 |
T |
|
| Q |
407 |
cacaaagcagttgcagtcacaattccttgcaaatccaacagacgtaaagaaacggattgagtctctcattgaaagggagtttttgaagagagatgataat |
506 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||| | |
|
|
| T |
14748725 |
cacaaagcagttgcagtcgcgattccttgcaaatccaacagacataaagaaacggattgagtctctcattgaaagggactttttggagagagatgatagt |
14748626 |
T |
|
| Q |
507 |
gacagaaaactgtatcattatatttcttagaattggt |
543 |
Q |
| |
|
|||||||||||||||| ||| || |||||||||||| |
|
|
| T |
14748625 |
gacagaaaactgtatctgtatcttgcttagaattggt |
14748589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 7 - 546
Target Start/End: Complemental strand, 14764174 - 14763635
Alignment:
| Q |
7 |
agttaaatgtctccacctatcaaatgtgtgtactcatgctatttaataatgctgatagactaagctacaaggaaattgagcaagcaactgagattccagc |
106 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
14764174 |
agttaaatgtctccacctatcaaatgtgtatactcatgctgtttaataatgctgatagactaagctacagggaaattgagcaagcaaccgagattccagc |
14764075 |
T |
|
| Q |
107 |
ttcagatttaaagaggtgcctgcaatctttggctttggttaagggaagaaatgtccttaggaaggagcctatgagtaaatatgttagtaagaatgatgca |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| || |||| || |
|
|
| T |
14764074 |
ttcagatttgaagaggtgcctgcaatctttggctttggttaagggaagaaatgtccttaggaaggagcctatgggtaaagatgttagcgaggatgacaca |
14763975 |
T |
|
| Q |
207 |
ttctttgttaatgacaatttcagtagcaaactgtataagttaaaaataggaattgtatttgctcaaaaggaatctgaaccggagaaactgaaaactcaac |
306 |
Q |
| |
|
|||| ||||||||||| || || || |||||||||||| |||||||||||| ||| |||| ||||||||||| |||| |||||||||| | |||| || |
|
|
| T |
14763974 |
ttctatgttaatgacagatttagcagtaaactgtataagataaaaataggaactgttgttgcacaaaaggaatcggaactggagaaactggacactcgac |
14763875 |
T |
|
| Q |
307 |
aaagacttgaggaggagcggaagccgcagattgaggcagcaatagcgaggattatgaaatctaggaagcaacttgatcacaacaatcttatagctgaggt |
406 |
Q |
| |
|
||| | |||||||| |||||||| |||||||| |||||||||| ||||||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
14763874 |
aaaaagaggaggaggatcggaagccccagattgaagcagcaatagtgaggattatgaaatccaggaagcaacttgagcacaacaatcttatggctgaggt |
14763775 |
T |
|
| Q |
407 |
cacaaagcagttgcagtcacaattccttgcaaatccaacagacgtaaagaaacggattgagtctctcattgaaagggagtttttgaagagagatgataat |
506 |
Q |
| |
|
||| ||||||||||||| | ||||||| |||||||||| || |||||||||||||||||||||||| |||| |||| |||||| | |||||| | | |
|
|
| T |
14763774 |
cacgcagcagttgcagtcgcgattccttacaaatccaacggatgtaaagaaacggattgagtctctccttgagcgggaatttttggaaagagatactgtt |
14763675 |
T |
|
| Q |
507 |
gacagaaaactgtatcattatatttcttagaattggtaag |
546 |
Q |
| |
|
|||||||||||||||| ||| || | ||||||||||||| |
|
|
| T |
14763674 |
gacagaaaactgtatcgatatcttgcctagaattggtaag |
14763635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 336 - 481
Target Start/End: Complemental strand, 14811804 - 14811659
Alignment:
| Q |
336 |
attgaggcagcaatagcgaggattatgaaatctaggaagcaacttgatcacaacaatcttatagctgaggtcacaaagcagttgcagtcacaattccttg |
435 |
Q |
| |
|
||||| |||||||||| |||||||||||||| | |||||| |||||||| || ||| ||||||| ||||| |||||| |||| ||||| |||||| |
|
|
| T |
14811804 |
attgaagcagcaatagtgaggattatgaaattcaagaagcagcttgatcataagaatattatagcagaggtgacaaaggagttaaagtcattgttccttc |
14811705 |
T |
|
| Q |
436 |
caaatccaacagacgtaaagaaacggattgagtctctcattgaaag |
481 |
Q |
| |
|
||||||||||| |||||||| ||||||| ||||| |||||||| |
|
|
| T |
14811704 |
ttaatccaacagagataaagaaaaggattgaatctcttattgaaag |
14811659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 336 - 481
Target Start/End: Complemental strand, 15258799 - 15258654
Alignment:
| Q |
336 |
attgaggcagcaatagcgaggattatgaaatctaggaagcaacttgatcacaacaatcttatagctgaggtcacaaagcagttgcagtcacaattccttg |
435 |
Q |
| |
|
||||| |||||||||| |||||||||||||| | |||||| |||||||| || ||| ||||||| ||||| |||||| |||| ||||| |||||| |
|
|
| T |
15258799 |
attgaagcagcaatagtgaggattatgaaattcaagaagcagcttgatcataagaatattatagcagaggtgacaaaggagttaaagtcattgttccttc |
15258700 |
T |
|
| Q |
436 |
caaatccaacagacgtaaagaaacggattgagtctctcattgaaag |
481 |
Q |
| |
|
||||||||||| |||||||| ||||||| ||||| |||||||| |
|
|
| T |
15258699 |
ttaatccaacagagataaagaaaaggattgaatctcttattgaaag |
15258654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 14804713 - 14804626
Alignment:
| Q |
7 |
agttaaatgtctccacctatcaaatgtgtgtactcatgctatttaataatgctgatagactaagctacaaggaaattgagcaagcaac |
94 |
Q |
| |
|
||||| ||||||||||||||||||||||||| | ||| | |||||| ||| |||| |||||||||||||||||||||| ||||||| |
|
|
| T |
14804713 |
agttacatgtctccacctatcaaatgtgtgtcttgatgttgtttaatgatgttgatcaactaagctacaaggaaattgagaaagcaac |
14804626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 15251707 - 15251620
Alignment:
| Q |
7 |
agttaaatgtctccacctatcaaatgtgtgtactcatgctatttaataatgctgatagactaagctacaaggaaattgagcaagcaac |
94 |
Q |
| |
|
||||| ||||||||||||||||||||||||| | ||| | |||||| ||| |||| |||||||||||||||||||||| ||||||| |
|
|
| T |
15251707 |
agttacatgtctccacctatcaaatgtgtgtcttgatgttgtttaatgatgttgatcaactaagctacaaggaaattgagaaagcaac |
15251620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 383
Target Start/End: Original strand, 14708660 - 14708697
Alignment:
| Q |
346 |
caatagcgaggattatgaaatctaggaagcaacttgat |
383 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
14708660 |
caatagtgaggattaagaaatctaggaagcaacttgat |
14708697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 383
Target Start/End: Complemental strand, 14757515 - 14757478
Alignment:
| Q |
346 |
caatagcgaggattatgaaatctaggaagcaacttgat |
383 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
14757515 |
caatagtgaggattaagaaatctaggaagcaacttgat |
14757478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Complemental strand, 14804386 - 14804337
Alignment:
| Q |
336 |
attgaggcagcaatagcgaggattatgaaatctaggaagcaacttgatca |
385 |
Q |
| |
|
||||| ||||||||||||||||| ||||| | ||||||||| |||||||| |
|
|
| T |
14804386 |
attgaagcagcaatagcgaggatcatgaagtttaggaagcagcttgatca |
14804337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Complemental strand, 15251380 - 15251331
Alignment:
| Q |
336 |
attgaggcagcaatagcgaggattatgaaatctaggaagcaacttgatca |
385 |
Q |
| |
|
||||| ||||||||||||||||| ||||| | ||||||||| |||||||| |
|
|
| T |
15251380 |
attgaagcagcaatagcgaggatcatgaagtttaggaagcagcttgatca |
15251331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 355; Significance: 0; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 8 - 546
Target Start/End: Complemental strand, 17621231 - 17620693
Alignment:
| Q |
8 |
gttaaatgtctccacctatcaaatgtgtgtactcatgctatttaataatgctgatagactaagctacaaggaaattgagcaagcaactgagattccagct |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
17621231 |
gttaaatgtctccacctatcaaatgtgtgtactcatgctgtttaataatgctgatagactaagctacaaggaaattgagcaagcaactgaaattccagct |
17621132 |
T |
|
| Q |
108 |
tcagatttaaagaggtgcctgcaatctttggctttggttaagggaagaaatgtccttaggaaggagcctatgagtaaatatgttagtaagaatgatgcat |
207 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||| || |||| |||| |
|
|
| T |
17621131 |
tcagatttgaagaggtgcctgcaatctttggctttggttaagggaagaaatgtcctgaggaaggagcctacgagtaaagatgttagcgaggatgacgcat |
17621032 |
T |
|
| Q |
208 |
tctttgttaatgacaatttcagtagcaaactgtataagttaaaaataggaattgtatttgctcaaaaggaatctgaaccggagaaactgaaaactcaaca |
307 |
Q |
| |
|
||| |||||||||||| ||||||||||||||||||||| |||||||||||| |||| || |||||||||||||||||||||||||||| ||||||| ||| |
|
|
| T |
17621031 |
tctatgttaatgacaagttcagtagcaaactgtataagataaaaataggaactgtagttactcaaaaggaatctgaaccggagaaactaaaaactcgaca |
17620932 |
T |
|
| Q |
308 |
aagacttgaggaggagcggaagccgcagattgaggcagcaatagcgaggattatgaaatctaggaagcaacttgatcacaacaatcttatagctgaggtc |
407 |
Q |
| |
|
|||| || ||||||||||||||||||||| |||||||||| ||| |||||||||||||||||| || |||| ||||| ||||||||||||||||||||| |
|
|
| T |
17620931 |
aagagttaaggaggagcggaagccgcagactgaggcagcagtagtgaggattatgaaatctagatagaaactagatcagaacaatcttatagctgaggtc |
17620832 |
T |
|
| Q |
408 |
acaaagcagttgcagtcacaattccttgcaaatccaacagacgtaaagaaacggattgagtctctcattgaaagggagtttttgaagagagatgataatg |
507 |
Q |
| |
|
||||||||||||| ||| | ||||||||||||||||||||| ||||| |||| |||||||||||||||||| ||||| |||||| |||||||| | | | |
|
|
| T |
17620831 |
acaaagcagttgcggtcgcgattccttgcaaatccaacagaggtaaaaaaacagattgagtctctcattgagagggactttttggagagagataacagta |
17620732 |
T |
|
| Q |
508 |
acagaaaactgtatcattatatttcttagaattggtaag |
546 |
Q |
| |
|
||||||||||||||| ||| || |||||| |||||||| |
|
|
| T |
17620731 |
acagaaaactgtatcggtatcttgcttagagttggtaag |
17620693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 7 - 546
Target Start/End: Original strand, 17564425 - 17564964
Alignment:
| Q |
7 |
agttaaatgtctccacctatcaaatgtgtgtactcatgctatttaataatgctgatagactaagctacaaggaaattgagcaagcaactgagattccagc |
106 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
17564425 |
agttaaatgtctccacctatcaaatgtgtatactcatgctgtttaataatgctgatagactaagctacagggaaattgagcaagcaaccgagattccagc |
17564524 |
T |
|
| Q |
107 |
ttcagatttaaagaggtgcctgcaatctttggctttggttaagggaagaaatgtccttaggaaggagcctatgagtaaatatgttagtaagaatgatgca |
206 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| || |||| || |
|
|
| T |
17564525 |
ttcagatttgaagaggtgcctgcaatctttggctttggttaagggaagaaatgtccttaggaaggagcctatgggtaaagatgttagcgaggatgacaca |
17564624 |
T |
|
| Q |
207 |
ttctttgttaatgacaatttcagtagcaaactgtataagttaaaaataggaattgtatttgctcaaaaggaatctgaaccggagaaactgaaaactcaac |
306 |
Q |
| |
|
|||| ||||||||||| || || || |||||||||||| |||||||||||| ||| |||| ||||||||||| |||| |||||||||| | |||| || |
|
|
| T |
17564625 |
ttctatgttaatgacagatttagcagtaaactgtataagataaaaataggaactgttgttgcacaaaaggaatcggaactggagaaactggacactcgac |
17564724 |
T |
|
| Q |
307 |
aaagacttgaggaggagcggaagccgcagattgaggcagcaatagcgaggattatgaaatctaggaagcaacttgatcacaacaatcttatagctgaggt |
406 |
Q |
| |
|
||| | | |||||||| |||||||| |||||||| |||||||||| ||||||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
17564725 |
aaaaagtggaggaggatcggaagccccagattgaagcagcaatagtgaggattatgaaatccaggaagcaacttgagcacaacaatcttatggctgaggt |
17564824 |
T |
|
| Q |
407 |
cacaaagcagttgcagtcacaattccttgcaaatccaacagacgtaaagaaacggattgagtctctcattgaaagggagtttttgaagagagatgataat |
506 |
Q |
| |
|
||| ||||||||||||| | ||||||| |||||||||| || |||||||||||||||||||||||| |||| |||| |||||| | |||||| | | |
|
|
| T |
17564825 |
cacgcagcagttgcagtcgcgattccttacaaatccaacggatgtaaagaaacggattgagtctctccttgagcgggaatttttggaaagagatcctgtt |
17564924 |
T |
|
| Q |
507 |
gacagaaaactgtatcattatatttcttagaattggtaag |
546 |
Q |
| |
|
|||||||||||||||| ||| || | ||||||||||||| |
|
|
| T |
17564925 |
gacagaaaactgtatcgatatcttgcctagaattggtaag |
17564964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 336 - 481
Target Start/End: Original strand, 17522376 - 17522521
Alignment:
| Q |
336 |
attgaggcagcaatagcgaggattatgaaatctaggaagcaacttgatcacaacaatcttatagctgaggtcacaaagcagttgcagtcacaattccttg |
435 |
Q |
| |
|
||||| |||||||||| |||||||||||||| | |||||| |||||||| || ||| ||||||| ||||| |||||| |||| ||||| |||||| |
|
|
| T |
17522376 |
attgaagcagcaatagtgaggattatgaaattcaagaagcagcttgatcataagaatattatagcagaggtgacaaaggagttaaagtcattgttccttc |
17522475 |
T |
|
| Q |
436 |
caaatccaacagacgtaaagaaacggattgagtctctcattgaaag |
481 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||| |||||||| |
|
|
| T |
17522476 |
ttaatccaacagaaataaagaaaaggattgagtctcttattgaaag |
17522521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 383
Target Start/End: Original strand, 17571020 - 17571057
Alignment:
| Q |
346 |
caatagcgaggattatgaaatctaggaagcaacttgat |
383 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
17571020 |
caatagtgaggattaagaaatctaggaagcaacttgat |
17571057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 330; Significance: 0; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 7 - 544
Target Start/End: Complemental strand, 15194614 - 15194077
Alignment:
| Q |
7 |
agttaaatgtctccacctatcaaatgtgtgtactcatgctatttaataatgctgatagactaagctacaaggaaattgagcaagcaactgagattccagc |
106 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15194614 |
agttaaatgtttctacctatcaaatgtgtgtactcatgctatttaataatgctgatagattaagctacaaggaaattgagcaagcaactgagattccagc |
15194515 |
T |
|
| Q |
107 |
ttcagatttaaagaggtgcctgcaatctttggctttggttaagggaagaaatgtccttaggaaggagcctatgagtaaatatgttagtaagaatgatgca |
206 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||| ||| ||||||||| ||| ||||||| |
|
|
| T |
15194514 |
ttcagatttgaagatgtgcctgcaatctttggctttggttaagggtaaaaatgtcctaaggaaggagcctatgaataattatgttagtgagattgatgca |
15194415 |
T |
|
| Q |
207 |
ttctttgttaatgacaatttcagtagcaaactgtataagttaaaaataggaattgtatttgctcaaaaggaatctgaaccggagaaactgaaaactcaac |
306 |
Q |
| |
|
||||||||||||||||| |||||||| ||| |||||||| |||||||||||| |||| ||||| ||| |||| |||||||||||||||||||||||||| |
|
|
| T |
15194414 |
ttctttgttaatgacaagttcagtagaaaattgtataaggtaaaaataggaagtgtagttgctgaaacggaacctgaaccggagaaactgaaaactcaaa |
15194315 |
T |
|
| Q |
307 |
aaagacttgaggaggagcggaagccgcagattgaggcagcaatagcgaggattatgaaatctaggaagcaacttgatcacaacaatcttatagctgaggt |
406 |
Q |
| |
|
||| | ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||||||||| |||| || ||||| |||||| ||||||| || |
|
|
| T |
15194314 |
aaaaagttgaggaggagcggaggccgcagattcaggcttcaatagtgaggattatgaaatctaggaagaaactggaacacaataatcttgtagctgaagt |
15194215 |
T |
|
| Q |
407 |
cacaaagcagttgcagtcacaattccttgcaaatccaacagacgtaaagaaacggattgagtctctcattgaaagggagtttttgaagagagatgataat |
506 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||||| || |||||||||| |||||||||||| ||||| |||| ||||||| |||||||| | | | |
|
|
| T |
15194214 |
aacaaagcagttgcagtctcgattccttgcaaatccaacggaggtaaagaaacagattgagtctctaattgagagggtgtttttggagagagataacagt |
15194115 |
T |
|
| Q |
507 |
gacagaaaactgtatcattatatttcttagaattggta |
544 |
Q |
| |
|
||||||||| |||||| |||| || ||||||||||||| |
|
|
| T |
15194114 |
gacagaaaattgtatcgttatcttgcttagaattggta |
15194077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 7 - 544
Target Start/End: Complemental strand, 15205299 - 15204762
Alignment:
| Q |
7 |
agttaaatgtctccacctatcaaatgtgtgtactcatgctatttaataatgctgatagactaagctacaaggaaattgagcaagcaactgagattccagc |
106 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15205299 |
agttaaatgtttctacctatcaaatgtgtgtactcatgctatttaataatgctgatagattaagctacaaggaaattgagcaagcaactgagattccagc |
15205200 |
T |
|
| Q |
107 |
ttcagatttaaagaggtgcctgcaatctttggctttggttaagggaagaaatgtccttaggaaggagcctatgagtaaatatgttagtaagaatgatgca |
206 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||||||||||| | | ||||||| ||||||||||||||| ||| ||||||||| ||| ||||||| |
|
|
| T |
15205199 |
ttcagatttgaagatgtgcctgcaatctttggctttggttaagggtaaagatgtcctacggaaggagcctatgaataattatgttagtgagattgatgca |
15205100 |
T |
|
| Q |
207 |
ttctttgttaatgacaatttcagtagcaaactgtataagttaaaaataggaattgtatttgctcaaaaggaatctgaaccggagaaactgaaaactcaac |
306 |
Q |
| |
|
||||||||||||||||| |||||||||||| |||||||| |||||||||||| |||| ||||| ||| |||| |||||||||||||||||||||||||| |
|
|
| T |
15205099 |
ttctttgttaatgacaagttcagtagcaaattgtataaggtaaaaataggaagtgtagttgctgaaacggaacctgaaccggagaaactgaaaactcaag |
15205000 |
T |
|
| Q |
307 |
aaagacttgaggaggagcggaagccgcagattgaggcagcaatagcgaggattatgaaatctaggaagcaacttgatcacaacaatcttatagctgaggt |
406 |
Q |
| |
|
||||| ||||||||||||||| |||||||||| |||| |||||| ||||||||||||||| |||||| |||| || ||||| |||||| ||||||| || |
|
|
| T |
15204999 |
aaagagttgaggaggagcggaggccgcagattcaggcttcaatagtgaggattatgaaatcaaggaagaaactggaacacaataatcttgtagctgaagt |
15204900 |
T |
|
| Q |
407 |
cacaaagcagttgcagtcacaattccttgcaaatccaacagacgtaaagaaacggattgagtctctcattgaaagggagtttttgaagagagatgataat |
506 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||||| || |||||||||| |||||||||||| ||||| |||| ||||||| |||||||| | | | |
|
|
| T |
15204899 |
aacaaagcagttgcagtctcgattccttgcaaatccaacggaggtaaagaaacagattgagtctctaattgagagggtgtttttggagagagataacagt |
15204800 |
T |
|
| Q |
507 |
gacagaaaactgtatcattatatttcttagaattggta |
544 |
Q |
| |
|
||||| ||| |||||| |||| || ||||||||||||| |
|
|
| T |
15204799 |
gacaggaaattgtatcgttatcttgcttagaattggta |
15204762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 7 - 544
Target Start/End: Complemental strand, 15215032 - 15214495
Alignment:
| Q |
7 |
agttaaatgtctccacctatcaaatgtgtgtactcatgctatttaataatgctgatagactaagctacaaggaaattgagcaagcaactgagattccagc |
106 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15215032 |
agttaaatgtttctacctatcaaatgtgtgtactcatgctatttaataatgctgatagattaagctacaaggaaattgagcaagcaactgagattccagc |
15214933 |
T |
|
| Q |
107 |
ttcagatttaaagaggtgcctgcaatctttggctttggttaagggaagaaatgtccttaggaaggagcctatgagtaaatatgttagtaagaatgatgca |
206 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||||||||||| | | ||||||| ||||||||||||||| ||| ||||||||| ||| ||||||| |
|
|
| T |
15214932 |
ttcagatttgaagatgtgcctgcaatctttggctttggttaagggtaaatatgtcctatggaaggagcctatgaataattatgttagtgagattgatgca |
15214833 |
T |
|
| Q |
207 |
ttctttgttaatgacaatttcagtagcaaactgtataagttaaaaataggaattgtatttgctcaaaaggaatctgaaccggagaaactgaaaactcaac |
306 |
Q |
| |
|
||||||||||||||||| |||||||| ||| |||||||| |||||||||||| |||| ||||| ||| |||| |||||||||||||||||||||||||| |
|
|
| T |
15214832 |
ttctttgttaatgacaagttcagtagtaaattgtataaggtaaaaataggaagtgtagttgctgaaacggaacctgaaccggagaaactgaaaactcaat |
15214733 |
T |
|
| Q |
307 |
aaagacttgaggaggagcggaagccgcagattgaggcagcaatagcgaggattatgaaatctaggaagcaacttgatcacaacaatcttatagctgaggt |
406 |
Q |
| |
|
||| | ||||||||||||||| |||||||||| |||| |||||| ||||||||||||||| |||||| |||| || ||||| |||||| ||||||| || |
|
|
| T |
15214732 |
aaatagttgaggaggagcggaggccgcagattcaggcttcaatagtgaggattatgaaatcaaggaagaaactggaacacaataatcttgtagctgaagt |
15214633 |
T |
|
| Q |
407 |
cacaaagcagttgcagtcacaattccttgcaaatccaacagacgtaaagaaacggattgagtctctcattgaaagggagtttttgaagagagatgataat |
506 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||||| || ||||||||||||||||||||||| ||||| |||| ||||||| |||||||| | | | |
|
|
| T |
15214632 |
aacaaagcagttgcagtctcgattccttgcaaatccaacggaggtaaagaaacggattgagtctctaattgagagggtgtttttggagagagataacagt |
15214533 |
T |
|
| Q |
507 |
gacagaaaactgtatcattatatttcttagaattggta |
544 |
Q |
| |
|
||||||||| |||||| |||| || ||||||||||||| |
|
|
| T |
15214532 |
gacagaaaattgtatcgttatcttgcttagaattggta |
15214495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 2 - 522
Target Start/End: Complemental strand, 24394599 - 24394079
Alignment:
| Q |
2 |
gcataagttaaatgtctccacctatcaaatgtgtgtactcatgctatttaataatgctgatagactaagctacaaggaaattgagcaagcaactgagatt |
101 |
Q |
| |
|
|||| ||||||||||||| ||||| ||||||||||| || ||||| || ||||||||||||| ||| ||||||||||| ||||||||||||||||||||| |
|
|
| T |
24394599 |
gcatgagttaaatgtctctacctaccaaatgtgtgtccttatgcttttcaataatgctgataaacttagctacaaggagattgagcaagcaactgagatt |
24394500 |
T |
|
| Q |
102 |
ccagcttcagatttaaagaggtgcctgcaatctttggctttggttaagggaagaaatgtccttaggaaggagcctatgagtaaatatgttagtaagaatg |
201 |
Q |
| |
|
|| || | ||| | ||||| || |||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||||||| ||||| || || ||| |
|
|
| T |
24394499 |
cctgccccggatcttaagagatgtctgcaatcattggctttagttaagggaagaaatgtccttagaaaggagccgatgagtaaagatgttggtgaggatg |
24394400 |
T |
|
| Q |
202 |
atgcattctttgttaatgacaatttcagtagcaaactgtataagttaaaaataggaattgtatttgctcaaaaggaatctgaaccggagaaactgaaaac |
301 |
Q |
| |
|
|||| |||| ||| |||||||| |||||||| ||||| || ||| | |||||||||| |||| |||| ||||||||||| ||||| ||||||| | |||| |
|
|
| T |
24394399 |
atgctttctctgtcaatgacaagttcagtagtaaactatacaaggttaaaataggaactgtagttgcacaaaaggaatccgaacctgagaaacaggaaac |
24394300 |
T |
|
| Q |
302 |
tcaacaaagacttgaggaggagcggaagccgcagattgaggcagcaatagcgaggattatgaaatctaggaagcaacttgatcacaacaatcttatagct |
401 |
Q |
| |
|
|| || || | |||||||| ||||||| ||||||||||| ||||||| |||||| ||||||||||||| || ||||||||| ||||||||||||||| |
|
|
| T |
24394299 |
tcggcagcgagtggaggaggacaggaagcctcagattgaggcggcaatagtgaggatcatgaaatctaggaggctacttgatcataacaatcttatagct |
24394200 |
T |
|
| Q |
402 |
gaggtcacaaagcagttgcagtcacaattccttgcaaatccaacagacgtaaagaaacggattgagtctctcattgaaagggagtttttgaagagagatg |
501 |
Q |
| |
|
|| ||||||||||||||||||| || |||||||||||||||||||| || |||||||| ||||||||||||||||| |||| |||||| |||| |||| |
|
|
| T |
24394199 |
gaagtcacaaagcagttgcagttacgtttccttgcaaatccaacagaggtcaagaaacgcattgagtctctcattgagcgggactttttggagagggatg |
24394100 |
T |
|
| Q |
502 |
ataatgacagaaaactgtatc |
522 |
Q |
| |
|
|||| ||||||||| |||||| |
|
|
| T |
24394099 |
ataacgacagaaaaatgtatc |
24394079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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