View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8058_low_20 (Length: 274)
Name: NF8058_low_20
Description: NF8058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8058_low_20 |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 8 - 255
Target Start/End: Original strand, 42568499 - 42568740
Alignment:
| Q |
8 |
cgaagaatattacgatacagaaaactattgtataagataaacaattaaaatgaaaaatccagcatacatgtaaggtgagactgtgaagagtacaaggcaa |
107 |
Q |
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| T |
42568499 |
cgaagaaaattacgatacagaaaactattgtataagataaacaattaaaatgaaaaatccagcatacatgtaaggtgagactgtgaagagtacaaggcaa |
42568598 |
T |
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| Q |
108 |
cttggagggaagattggaatagtttggtacttggacatccccatctttcttcaaagatgctgcaacctgaaacaaaaacaaaatgaatgtaattataatt |
207 |
Q |
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| T |
42568599 |
cttggagggaagattggaatagtttggtacttggacatccccatctttcttcaaagatgctgcaacctgaaacaaaaacaaaatgaatg------taatt |
42568692 |
T |
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| Q |
208 |
ataattataatacggccatgtttggataaacaacttaatcaaacactt |
255 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42568693 |
ataattataatacggccatgtttggataaacaacttaatcaaacactt |
42568740 |
T |
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