View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8058_low_35 (Length: 212)

Name: NF8058_low_35
Description: NF8058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8058_low_35
NF8058_low_35
[»] chr7 (39 HSPs)
chr7 (32-196)||(4501200-4501363)
chr7 (35-195)||(19277235-19277395)
chr7 (32-195)||(982891-983054)
chr7 (32-195)||(21326840-21327003)
chr7 (38-192)||(24527534-24527688)
chr7 (32-196)||(27521412-27521576)
chr7 (57-196)||(48539122-48539261)
chr7 (32-196)||(32584541-32584706)
chr7 (40-196)||(43856815-43856971)
chr7 (36-196)||(22197928-22198087)
chr7 (36-196)||(22239734-22239893)
chr7 (52-196)||(45613864-45614008)
chr7 (37-195)||(30216065-30216223)
chr7 (32-196)||(10905059-10905222)
chr7 (32-196)||(40726482-40726646)
chr7 (33-196)||(42295187-42295350)
chr7 (39-195)||(25186945-25187096)
chr7 (37-196)||(5825214-5825373)
chr7 (32-196)||(28517289-28517453)
chr7 (75-196)||(5972261-5972382)
chr7 (37-146)||(9281138-9281247)
chr7 (37-146)||(9292109-9292218)
chr7 (60-196)||(36558898-36559033)
chr7 (97-195)||(41117837-41117935)
chr7 (60-196)||(6634993-6635129)
chr7 (37-134)||(2904368-2904465)
chr7 (35-196)||(34772723-34772883)
chr7 (42-196)||(23792953-23793107)
chr7 (42-140)||(47679122-47679220)
chr7 (52-158)||(10032193-10032299)
chr7 (114-196)||(23037486-23037568)
chr7 (121-195)||(44525927-44526001)
chr7 (32-95)||(3676681-3676744)
chr7 (38-79)||(26770455-26770496)
chr7 (152-196)||(45003019-45003063)
chr7 (39-93)||(4879547-4879601)
chr7 (162-196)||(45974731-45974765)
chr7 (158-195)||(27027758-27027795)
chr7 (37-142)||(47251789-47251893)
[»] chr3 (34 HSPs)
chr3 (32-196)||(53785650-53785814)
chr3 (32-196)||(39583231-39583395)
chr3 (36-173)||(52741518-52741655)
chr3 (32-197)||(44198707-44198872)
chr3 (32-195)||(32546737-32546900)
chr3 (38-196)||(37133007-37133165)
chr3 (32-196)||(26772699-26772863)
chr3 (37-193)||(26856769-26856925)
chr3 (33-196)||(54508386-54508550)
chr3 (37-194)||(38670887-38671044)
chr3 (40-196)||(38978809-38978965)
chr3 (33-196)||(3443315-3443478)
chr3 (42-173)||(52411903-52412034)
chr3 (58-179)||(5338601-5338722)
chr3 (39-196)||(7900799-7900956)
chr3 (44-196)||(38145997-38146149)
chr3 (37-173)||(51234580-51234716)
chr3 (32-196)||(7502013-7502176)
chr3 (32-196)||(46940772-46940939)
chr3 (37-196)||(13582451-13582609)
chr3 (36-196)||(49017908-49018064)
chr3 (38-196)||(21552605-21552766)
chr3 (36-196)||(37992274-37992433)
chr3 (113-192)||(44781-44860)
chr3 (38-167)||(25324999-25325130)
chr3 (38-196)||(4473003-4473160)
chr3 (125-196)||(4763888-4763958)
chr3 (38-137)||(3376748-3376848)
chr3 (123-195)||(25094665-25094737)
chr3 (139-202)||(3643086-3643149)
chr3 (53-196)||(43123086-43123229)
chr3 (126-196)||(464977-465047)
chr3 (119-163)||(4669086-4669130)
chr3 (37-95)||(13772491-13772549)
[»] chr2 (29 HSPs)
chr2 (32-195)||(4413068-4413231)
chr2 (32-196)||(17344579-17344743)
chr2 (32-196)||(41867910-41868074)
chr2 (32-196)||(18744956-18745120)
chr2 (32-195)||(9685417-9685580)
chr2 (32-196)||(19161785-19161949)
chr2 (36-196)||(28224941-28225101)
chr2 (31-196)||(44686357-44686526)
chr2 (81-196)||(13413292-13413407)
chr2 (37-179)||(34814826-34814967)
chr2 (58-179)||(20142753-20142874)
chr2 (32-189)||(5532368-5532524)
chr2 (52-196)||(2886637-2886780)
chr2 (32-196)||(16351843-16352010)
chr2 (32-193)||(7760848-7761008)
chr2 (32-173)||(2888480-2888621)
chr2 (32-196)||(23484940-23485102)
chr2 (52-196)||(32029108-32029252)
chr2 (32-196)||(27502303-27502467)
chr2 (38-197)||(33612555-33612712)
chr2 (57-196)||(3825667-3825806)
chr2 (32-192)||(13147099-13147262)
chr2 (38-146)||(11921218-11921326)
chr2 (33-196)||(44720263-44720427)
chr2 (36-142)||(29808070-29808175)
chr2 (32-165)||(3968411-3968544)
chr2 (127-196)||(44684955-44685024)
chr2 (114-179)||(8036566-8036633)
chr2 (33-79)||(1296053-1296099)
[»] scaffold0490 (1 HSPs)
scaffold0490 (32-192)||(6279-6439)
[»] chr8 (40 HSPs)
chr8 (32-196)||(38815235-38815399)
chr8 (33-196)||(24124969-24125132)
chr8 (32-196)||(6592517-6592680)
chr8 (32-166)||(500199-500332)
chr8 (32-196)||(3187911-3188074)
chr8 (32-180)||(35739988-35740136)
chr8 (38-196)||(6618226-6618383)
chr8 (32-196)||(39434608-39434772)
chr8 (60-192)||(37514166-37514298)
chr8 (88-195)||(22589395-22589501)
chr8 (42-196)||(25021826-25021980)
chr8 (107-196)||(3821165-3821254)
chr8 (32-146)||(8882319-8882432)
chr8 (38-196)||(28196133-28196291)
chr8 (32-196)||(4073475-4073640)
chr8 (37-146)||(8619805-8619914)
chr8 (107-182)||(18804567-18804642)
chr8 (32-190)||(39671173-39671332)
chr8 (32-170)||(8115779-8115916)
chr8 (67-168)||(3863286-3863387)
chr8 (107-168)||(40223480-40223541)
chr8 (73-196)||(43823930-43824053)
chr8 (37-99)||(10189581-10189643)
chr8 (67-196)||(3825576-3825705)
chr8 (55-155)||(6120947-6121045)
chr8 (115-192)||(9259377-9259454)
chr8 (32-196)||(4699812-4699973)
chr8 (37-196)||(8540384-8540546)
chr8 (58-190)||(36004069-36004201)
chr8 (43-95)||(42922140-42922192)
chr8 (152-195)||(24451062-24451105)
chr8 (114-196)||(121805-121887)
chr8 (32-194)||(10556295-10556456)
chr8 (64-146)||(27715339-27715421)
chr8 (60-137)||(4097373-4097450)
chr8 (46-147)||(43421302-43421403)
chr8 (108-196)||(5329680-5329768)
chr8 (44-100)||(10950673-10950729)
chr8 (44-100)||(10958678-10958734)
chr8 (152-196)||(42659168-42659212)
[»] chr1 (28 HSPs)
chr1 (32-195)||(22346837-22347000)
chr1 (33-191)||(21472949-21473107)
chr1 (32-173)||(29169795-29169936)
chr1 (32-193)||(28041129-28041290)
chr1 (42-196)||(20259809-20259963)
chr1 (32-196)||(45659650-45659812)
chr1 (32-196)||(34644507-34644671)
chr1 (32-196)||(2898643-2898810)
chr1 (32-187)||(31737325-31737480)
chr1 (32-196)||(2764420-2764584)
chr1 (59-195)||(24177540-24177676)
chr1 (37-193)||(4861996-4862152)
chr1 (42-196)||(38731550-38731704)
chr1 (32-119)||(19035465-19035552)
chr1 (32-146)||(50314626-50314740)
chr1 (34-165)||(42919832-42919962)
chr1 (53-195)||(7213192-7213335)
chr1 (39-192)||(18616162-18616315)
chr1 (66-196)||(47459623-47459753)
chr1 (32-196)||(50161419-50161590)
chr1 (52-179)||(37932239-37932366)
chr1 (32-137)||(16500034-16500139)
chr1 (37-99)||(15584912-15584974)
chr1 (32-106)||(36486917-36486991)
chr1 (121-173)||(35387747-35387799)
chr1 (140-187)||(868513-868560)
chr1 (32-85)||(23043929-23043982)
chr1 (55-196)||(35550100-35550241)
[»] scaffold0148 (1 HSPs)
scaffold0148 (32-196)||(33191-33355)
[»] chr6 (24 HSPs)
chr6 (32-196)||(959522-959685)
chr6 (32-196)||(4206598-4206762)
chr6 (32-171)||(4165924-4166063)
chr6 (37-172)||(45684-45819)
chr6 (32-196)||(17249307-17249471)
chr6 (36-192)||(34304441-34304597)
chr6 (32-196)||(33220713-33220877)
chr6 (35-196)||(29338084-29338245)
chr6 (32-196)||(28625872-28626036)
chr6 (32-196)||(357719-357882)
chr6 (33-169)||(34415404-34415540)
chr6 (36-196)||(34554283-34554442)
chr6 (37-173)||(24016301-24016437)
chr6 (38-197)||(3714857-3715016)
chr6 (121-196)||(32115659-32115734)
chr6 (48-156)||(26225597-26225705)
chr6 (53-196)||(13398205-13398348)
chr6 (122-193)||(31703561-31703632)
chr6 (150-196)||(3137367-3137413)
chr6 (32-92)||(34168913-34168973)
chr6 (43-185)||(22985873-22986015)
chr6 (43-185)||(23802379-23802521)
chr6 (32-132)||(6225077-6225177)
chr6 (32-100)||(28543412-28543480)
[»] scaffold0009 (1 HSPs)
scaffold0009 (33-196)||(103047-103209)
[»] chr5 (36 HSPs)
chr5 (32-173)||(42921661-42921802)
chr5 (32-196)||(32269799-32269963)
chr5 (32-196)||(37873640-37873804)
chr5 (32-196)||(13166912-13167076)
chr5 (32-196)||(15292028-15292191)
chr5 (32-196)||(33692057-33692220)
chr5 (32-196)||(35310389-35310553)
chr5 (62-196)||(22188687-22188821)
chr5 (32-196)||(25663034-25663198)
chr5 (32-146)||(43129525-43129639)
chr5 (36-196)||(38875580-38875739)
chr5 (34-173)||(34335301-34335440)
chr5 (32-192)||(26212585-26212745)
chr5 (53-196)||(430543-430686)
chr5 (39-179)||(14423643-14423776)
chr5 (32-192)||(27336640-27336798)
chr5 (55-168)||(14723269-14723382)
chr5 (37-172)||(8100517-8100652)
chr5 (37-130)||(35455963-35456056)
chr5 (65-172)||(41343473-41343581)
chr5 (129-196)||(2566194-2566261)
chr5 (37-156)||(43115464-43115583)
chr5 (36-110)||(32230513-32230587)
chr5 (32-105)||(3114165-3114238)
chr5 (43-196)||(19260245-19260396)
chr5 (58-172)||(7716146-7716261)
chr5 (37-84)||(8858969-8859016)
chr5 (32-95)||(14436542-14436602)
chr5 (43-146)||(27294429-27294528)
chr5 (141-196)||(23023536-23023591)
chr5 (38-86)||(7143757-7143805)
chr5 (115-195)||(15809991-15810069)
chr5 (58-195)||(15833004-15833138)
chr5 (119-170)||(23423960-23424011)
chr5 (39-85)||(9829361-9829407)
chr5 (104-148)||(8087547-8087591)
[»] chr4 (45 HSPs)
chr4 (36-196)||(600698-600858)
chr4 (35-195)||(53170454-53170609)
chr4 (37-196)||(25504236-25504395)
chr4 (37-196)||(56462113-56462272)
chr4 (32-195)||(34107696-34107861)
chr4 (32-196)||(53619527-53619691)
chr4 (33-196)||(132326-132489)
chr4 (32-196)||(26521430-26521593)
chr4 (38-195)||(6865828-6865984)
chr4 (51-196)||(7536592-7536737)
chr4 (32-196)||(50000927-50001092)
chr4 (45-154)||(50483211-50483320)
chr4 (56-196)||(3329937-3330077)
chr4 (32-195)||(30940741-30940897)
chr4 (107-196)||(16955401-16955490)
chr4 (32-196)||(55933464-55933626)
chr4 (68-196)||(38535607-38535735)
chr4 (52-186)||(46440911-46441045)
chr4 (114-196)||(4419204-4419286)
chr4 (52-142)||(11562893-11562983)
chr4 (31-169)||(54190857-54190990)
chr4 (31-165)||(43849349-43849483)
chr4 (36-173)||(50462952-50463089)
chr4 (32-196)||(23255654-23255809)
chr4 (55-155)||(53098403-53098503)
chr4 (38-192)||(46391323-46391474)
chr4 (37-196)||(48656917-48657081)
chr4 (73-159)||(747812-747898)
chr4 (32-146)||(31847078-31847192)
chr4 (32-141)||(12918374-12918483)
chr4 (36-111)||(16957568-16957643)
chr4 (73-159)||(712636-712722)
chr4 (86-196)||(39001338-39001448)
chr4 (115-192)||(42455692-42455769)
chr4 (139-194)||(8738148-8738203)
chr4 (32-187)||(45386063-45386218)
chr4 (32-196)||(28739846-28740011)
chr4 (37-99)||(45760841-45760903)
chr4 (37-90)||(12053460-12053513)
chr4 (47-95)||(24719976-24720024)
chr4 (37-85)||(28883158-28883206)
chr4 (121-173)||(50464387-50464439)
chr4 (150-196)||(18981659-18981704)
chr4 (115-195)||(32312796-32312876)
chr4 (120-196)||(34213561-34213636)
[»] scaffold0470 (1 HSPs)
scaffold0470 (38-196)||(7544-7701)
[»] scaffold1768 (1 HSPs)
scaffold1768 (32-196)||(186-350)
[»] scaffold0186 (1 HSPs)
scaffold0186 (33-169)||(10329-10468)
[»] scaffold0224 (1 HSPs)
scaffold0224 (34-165)||(18369-18499)
[»] scaffold0031 (1 HSPs)
scaffold0031 (43-189)||(49363-49505)
[»] scaffold0493 (1 HSPs)
scaffold0493 (39-146)||(8525-8632)
[»] scaffold0110 (1 HSPs)
scaffold0110 (33-101)||(47542-47610)
[»] scaffold0119 (2 HSPs)
scaffold0119 (33-79)||(16192-16238)
scaffold0119 (88-170)||(16073-16154)


Alignment Details
Target: chr7 (Bit Score: 133; Significance: 2e-69; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 4501363 - 4501200
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  4501363 gtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttatataatttgcttttgacacttt-ggttttctagcaccagaggttgttgaccttc 4501265  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  4501264 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcctagattcatgaatgttgtgttt 4501200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 35 - 195
Target Start/End: Complemental strand, 19277395 - 19277235
Alignment:
Q  35 gccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctac 134  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||    
T  19277395 gccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcggtttcctagcaccagaggttgttgaccttctac 19277296  T
Q  135 atagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 195  Q
    |||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||    
T  19277295 atagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtt 19277235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 32 - 195
Target Start/End: Complemental strand, 983054 - 982891
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||| |||||||||||||| |||||    
T  983054 gtggccaaacatgagaaatcgtgttctgacaatcaacatgcttttataccatttgcttttgatactttcggttttctagcaccagaggttgttggccttc 982955  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 195  Q
    ||||||||||||||||| ||||||||| |||||||||||||  || || |||||||||||||||    
T  982954 tacatagagttcaaaaggtcatgcatatcaatgtcatgtcttctatgtccatgaatgttgtgtt 982891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 32 - 195
Target Start/End: Original strand, 21326840 - 21327003
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||| |||| |||||||| ||||||||||     
T  21326840 gtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcgatttcctagcaccagaggctgttgaccttt 21326939  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 195  Q
    ||||||||||||||||| |||||||||||||||| ||||||| ||||| |||||||||||||||    
T  21326940 tacatagagttcaaaaggtcatgcatagcaatgttatgtctcctaggtccatgaatgttgtgtt 21327003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 38 - 192
Target Start/End: Complemental strand, 24527688 - 24527534
Alignment:
Q  38 aaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 137  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||| |||| || |||||  ||||||||||||||||    
T  24527688 aaacatgagaaaacgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcagtttcctagcacgagaggcggttgaccttctacata 24527589  T
Q  138 gagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgt 192  Q
    ||||||||||| ||||||||||||||||||| |||| | ||| ||||||||||||    
T  24527588 gagttcaaaaggtcatgcatagcaatgtcatttctccttggtccatgaatgttgt 24527534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 27521576 - 27521412
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||  |||| ||||||||| ||| ||||| |||| | ||||||||||||||||||    
T  27521576 gtggtcaaacatgagaaaacgtgttctgacaatcaacatgcatttatacaatttacttttgacacttttggtttcctagcatcagaggttgttgaccttc 27521477  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||||||||||| ||||||||| |||||||||||||| || ||  |||||||||||||||    
T  27521476 tacatagagttcaaaaggtcatgcataacaatgtcatgtctcctaagtctatgaatgttgtgttt 27521412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 57 - 196
Target Start/End: Complemental strand, 48539261 - 48539122
Alignment:
Q  57 ctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgca 156  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||| |||||| | |||||||||||| |||||| |||||||    
T  48539261 ctgacaatcaacatgcttttataccatttgcttttgacactttcggttttctagcaccagaggctgttgatcgtctacatagagtccaaaaggtcatgca 48539162  T
Q  157 tagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  48539161 tagcaatgtcatgtctcctaggtccatgaatgttgtgttt 48539122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 32584706 - 32584541
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||| |||  |||| |||| ||||||||||||||||||||    
T  32584706 gtggtcaaacatgagaaaacgtgttctgacaatcaagatgcttttacaccatttgcttttgacactttatgtttcctagcaccagaggttgttgaccttc 32584607  T
Q  132 tacatagagtt-caaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    || |||||||| |||||| ||||||||| |||||| ||||||||||| |  |||||||||||||||    
T  32584606 tagatagagttccaaaagatcatgcatatcaatgttatgtctcatagatcgatgaatgttgtgttt 32584541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 40 - 196
Target Start/End: Complemental strand, 43856971 - 43856815
Alignment:
Q  40 acatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacataga 139  Q
    |||||||||| |||||| ||||||||||||||| ||||||  |||||||||||||||||| ||||| |||  ||||||||||||||||||||||||||||    
T  43856971 acatgagaaagcgtgttttgacaatcaacatgcgtttatacaatttgcttttgacatttttggtttcctaacaccagaggttgttgaccttctacataga 43856872  T
Q  140 gttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||| | ||||||| | |||||||||| ||| ||||| |||||||||| |||||    
T  43856871 gttcaaagggtcatgcacaacaatgtcatgactcctaggtccatgaatgttatgttt 43856815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 36 - 196
Target Start/End: Complemental strand, 22198087 - 22197928
Alignment:
Q  36 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctaca 135  Q
    ||||||||||||||  ||||||  |||||||||||| ||||||| |||||||||||| || ||||||||| |||| | ||||||||||||||||||||||    
T  22198087 ccaaacatgagaaagtgtgttccaacaatcaacatgtttttataccatttgcttttgtcactttcggtttcctagcatcagaggttgttgaccttctaca 22197988  T
Q  136 tagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||||||| | ||| ||||||| |||||||||| |||||  |||||||||||||||    
T  22197987 tagagttcaaaaggttatg-atagcaacgtcatgtctcctaggtcaatgaatgttgtgttt 22197928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 36 - 196
Target Start/End: Original strand, 22239734 - 22239893
Alignment:
Q  36 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctaca 135  Q
    ||||||||||||||  ||||||  |||||||||||| ||||||| |||||||||||| || ||||||||| |||| | ||||||||||||||||||||||    
T  22239734 ccaaacatgagaaagtgtgttccaacaatcaacatgtttttataccatttgcttttgtcactttcggtttcctagcatcagaggttgttgaccttctaca 22239833  T
Q  136 tagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||||||| | ||| ||||||| |||||||||| |||||  |||||||||||||||    
T  22239834 tagagttcaaaaggttatg-atagcaacgtcatgtctcctaggtcaatgaatgttgtgttt 22239893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 196
Target Start/End: Original strand, 45613864 - 45614008
Alignment:
Q  52 gtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttc 151  Q
    |||||||||||||||||||| ||||||| |||||| |||||||| ||||||||| | || |||||||| ||||  |||||||||||||||||||||||||    
T  45613864 gtgttctgacaatcaacatgtttttataccatttgattttgacactttcggtttccaagcaccagaggctgttagccttctacatagagttcaaaagttc 45613963  T
Q  152 atgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||| ||||||||  |||| ||||| ||||||||||||||||    
T  45613964 atgcataacaatgtcaaatctcctaggtccatgaatgttgtgttt 45614008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 37 - 195
Target Start/End: Original strand, 30216065 - 30216223
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 136  Q
    |||| |||||||| |||||| |||||||||||||| ||||||| ||||||||||||||| ||||||||| |||| | ||||| ||||||| |||| ||||    
T  30216065 caaatatgagaaagcgtgttttgacaatcaacatgtttttataccatttgcttttgacactttcggtttcctagcatcagagtttgttgatcttccacat 30216164  T
Q  137 agagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 195  Q
    | |||||||| | ||||||||||||||||||| |||| |||||  ||||||||||||||    
T  30216165 aaagttcaaatggtcatgcatagcaatgtcatatctcctaggtctatgaatgttgtgtt 30216223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 10905222 - 10905059
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    ||||||||| ||||||||| ||||||||||| |||||||||||| ||| ||||||||||||||| ||| ||||  |||| |||||||  |||||||||||    
T  10905222 gtggccaaatatgagaaaaagtgttctgacactcaacatgcttt-ataccatttgcttttgacacttttggttgcctagcaccagagtatgttgaccttc 10905124  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||||||||    |||||||| |||||||||||||| ||||| ||||||||| ||||||    
T  10905123 tacatagagttcaaagagccatgcataacaatgtcatgtctcctaggtccatgaatgtcgtgttt 10905059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 40726482 - 40726646
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||| | |||| |||||||||||||||||||| ||||||| |||||| |||||||| |||||| ||  ||| | ||||||||||||||||||    
T  40726482 gtggccaaacataataaaatgtgttctgacaatcaacatgtttttataccatttgtttttgacactttcggcttcatagcatcagaggttgttgaccttc 40726581  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||| |||| | | ||||||| |||||  ||||||| ||| | ||||||||||||||||    
T  40726582 tacatagagtccaaagggttatgcataacaatgctatgtctcctagatccatgaatgttgtgttt 40726646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 42295187 - 42295350
Alignment:
Q  33 tggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttct 132  Q
    ||||||||||| ||||| | | ||||||||||||||||| ||||||| |||||| |||| | | ||||||||| |||  ||||| |||||||||||||||    
T  42295187 tggccaaacataagaaagcttcttctgacaatcaacatgtttttataccatttgttttttatactttcggtttcctaacaccaggggttgttgaccttct 42295286  T
Q  133 acatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||| ||||||||  ||||||||| || ||||||||||| ||||| ||||||| ||||||||    
T  42295287 acatagcgttcaaaatatcatgcataacattgtcatgtctcctaggtccatgaatcttgtgttt 42295350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 39 - 195
Target Start/End: Original strand, 25186945 - 25187096
Alignment:
Q  39 aacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatag 138  Q
    ||||||||||| ||||||| || |||||||||| |||| || |||||||||||||     ||||||| | |  || ||||||||||||||||||| ||||    
T  25186945 aacatgagaaagcgtgttccgataatcaacatgtttttctaccatttgcttttga-----tcggtttccgaacactagaggttgttgaccttctatatag 25187039  T
Q  139 agttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 195  Q
    |||||||||| |||||||||||||||||||||||| ||| | |||||||||||||||    
T  25187040 agttcaaaaggtcatgcatagcaatgtcatgtctcctagatccatgaatgttgtgtt 25187096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 37 - 196
Target Start/End: Complemental strand, 5825373 - 5825214
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 136  Q
    ||||||||| ||  |||||| |||||||||||||| ||||||| ||||| ||||||||| ||||||  | |||| |||||||||||||||||||||||||    
T  5825373 caaacatgacaatgcgtgttatgacaatcaacatgtttttataccatttacttttgacactttcggcatcctagcaccagaggttgttgaccttctacat 5825274  T
Q  137 agagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||  ||| | | |||||||||||||| ||||||| |||||  ||| |||||||||||    
T  5825273 agagtcgaaagggttatgcatagcaatgttatgtctcctaggtctatggatgttgtgttt 5825214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 28517289 - 28517453
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||||| ||||||  ||||||||||||| ||||||| ||||||||||||||| ||| |  || |||| | |||||   ||||||||||    
T  28517289 gtggccaaacatgagaaagcgtgtttagacaatcaacatgtttttataccatttgcttttgacacttttgacttcctagcatcagagacagttgaccttc 28517388  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||| |||| | | ||||||| |||||| ||||||| || || ||||||||||||||||    
T  28517389 tacatagagtccaaagggttatgcataacaatgttatgtctcctaagtccatgaatgttgtgttt 28517453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 75 - 196
Target Start/End: Original strand, 5972261 - 5972382
Alignment:
Q  75 ttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctca 174  Q
    ||||| |||||| |||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||  |||||||||| |||||||| ||||     
T  5972261 ttataccatttgtttttgacattttcatttttctagtatcagaggttgttgaccttctacatagagttcaaaatgtcatgcatagtaatgtcatttctcc 5972360  T
Q  175 taggttcatgaatgttgtgttt 196  Q
     || |  |||||||||||||||    
T  5972361 cagatctatgaatgttgtgttt 5972382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 37 - 146
Target Start/End: Original strand, 9281138 - 9281247
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 136  Q
    ||||||||||||| |||||||| ||||||||||||||||||||  |||||  |||||||||||  | || |||| |||||| ||||||||||||||||||    
T  9281138 caaacatgagaaagcgtgttctaacaatcaacatgcttttatactatttggatttgacattttttgcttcctagcaccagatgttgttgaccttctacat 9281237  T
Q  137 agagttcaaa 146  Q
    ||||||||||    
T  9281238 agagttcaaa 9281247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 37 - 146
Target Start/End: Original strand, 9292109 - 9292218
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 136  Q
    ||||||||||||| |||||||| ||||||||||||||||||||  |||||  |||||||||||  | || |||| |||||| ||||||||||||||||||    
T  9292109 caaacatgagaaagcgtgttctaacaatcaacatgcttttatactatttggatttgacattttttgcttcctagcaccagatgttgttgaccttctacat 9292208  T
Q  137 agagttcaaa 146  Q
    ||||||||||    
T  9292209 agagttcaaa 9292218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 60 - 196
Target Start/End: Original strand, 36558898 - 36559033
Alignment:
Q  60 acaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatag 159  Q
    |||||||||||| |||||||| |||||| ||||||||||| |||||||||| |||| | || |||||| |||| ||||||||| ||| | |||||||||     
T  36558898 acaatcaacatgtttttatataatttgcatttgacatttttggttttctagcaccaaaagtcgttgactttctccatagagtt-aaatggtcatgcatat 36558996  T
Q  160 caatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
     ||| |||||||| |||||| ||||||||||||||||    
T  36558997 aaatatcatgtcttataggtccatgaatgttgtgttt 36559033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 97 - 195
Target Start/End: Original strand, 41117837 - 41117935
Alignment:
Q  97 tttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 195  Q
    ||||||||| |||  |||||| |||||| ||||||||||||||||| ||||| ||||||||||||||||||||| || ||||| |||||||||||||||    
T  41117837 tttcggtttcctaacaccagatgttgttaaccttctacatagagtttaaaagatcatgcatagcaatgtcatgtttcctaggtccatgaatgttgtgtt 41117935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 60 - 196
Target Start/End: Original strand, 6634993 - 6635129
Alignment:
Q  60 acaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatag 159  Q
    |||||||||||  ||||||||||||||||||||||| ||||| |||| ||| | ||||||||||||||||||||| || | || |||   || ||||||     
T  6634993 acaatcaacatatttttatatcatttgcttttgacagtttcgattttttagcatcagaggttgttgaccttctacgtaaaattaaaataatcttgcataa 6635092  T
Q  160 caatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||||||| ||| | ||| ||||||||||||    
T  6635093 caatgtcatgtctcctagatccataaatgttgtgttt 6635129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 37 - 134
Target Start/End: Complemental strand, 2904465 - 2904368
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctac 134  Q
    ||||||||||||| | ||||| ||||||||||||| |||||||||||||| || |||||| || || || |||| || ||||||||||||||||||||    
T  2904465 caaacatgagaaagcatgttccgacaatcaacatgattttatatcatttgtttgtgacatgtttggcttcctagcactagaggttgttgaccttctac 2904368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 35 - 196
Target Start/End: Complemental strand, 34772883 - 34772723
Alignment:
Q  35 gccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctac 134  Q
    |||||| ||||||||  |||||| |||||| || ||| ||||||| ||||||||||||| | ||||  |||  ||| |  ||||||||||||||||||||    
T  34772883 gccaaatatgagaaagtgtgttcggacaattaatatgtttttataccatttgcttttgaaactttcaatttcttag-attagaggttgttgaccttctac 34772785  T
Q  135 atagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||| | |||||||  ||||||||| ||||||||||| |  ||||| ||||||| ||||||||    
T  34772784 ataaacttcaaaaagtcatgcatatcaatgtcatgttttctaggtccatgaatattgtgttt 34772723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 42 - 196
Target Start/End: Complemental strand, 23793107 - 23792953
Alignment:
Q  42 atgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagt 141  Q
    |||||||||  |||| ||||||||||||||||| ||||||| ||   ||||||| ||| | |||  ||| |||| ||||||||||||||||| ||| |||    
T  23793107 atgagaaaatatgttttgacaatcaacatgcttctatatcaattatgtttgacacttttgttttcttagcaccacaggttgttgaccttctaaatacagt 23793008  T
Q  142 tcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||| | |||| ||||| ||||| ||||||| |||||  || ||| ||||||||    
T  23793007 tcaaaggatcatacatagtaatgtaatgtctcctaggtctataaatcttgtgttt 23792953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 42 - 140
Target Start/End: Complemental strand, 47679220 - 47679122
Alignment:
Q  42 atgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagag 140  Q
    ||||||||  ||||||| |||||||| || ||||||||  |||||| ||||||||||||||||| |||| | || ||||||||||||||||| ||||||    
T  47679220 atgagaaagtgtgttctcacaatcaatatacttttatactatttgcgtttgacattttcggtttcctagcatcacaggttgttgaccttctaaatagag 47679122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 158
Target Start/End: Original strand, 10032193 - 10032299
Alignment:
Q  52 gtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttc 151  Q
    |||||||||||||||| ||| |||||||  |||||||||||| |||||| | ||  ||| |  ||| |||||| ||||||||||||||||||||| | ||    
T  10032193 gtgttctgacaatcaatatgtttttatactatttgcttttgatattttcagcttcttagcattagatgttgttaaccttctacatagagttcaaaggatc 10032292  T
Q  152 atgcata 158  Q
    |||||||    
T  10032293 atgcata 10032299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 196
Target Start/End: Complemental strand, 23037568 - 23037486
Alignment:
Q  114 cagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||||||||| ||||| ||| ||||||| | | ||||||||||||||||| |||| |||||  |||||| ||||||||    
T  23037568 cagaggttgttgaccatctacgtagggttcaaagggttatgcatagcaatgtcatttctcttaggtctatgaattttgtgttt 23037486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 44526001 - 44525927
Alignment:
Q  121 tgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 195  Q
    |||||||||||||||| |||||||||||   ||||||| |||||||||||||| ||  | |||||||||||||||    
T  44526001 tgttgaccttctacatggagttcaaaagaatatgcataacaatgtcatgtctcctatatccatgaatgttgtgtt 44525927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 3676744 - 3676681
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgaca 95  Q
    |||| ||||||| ||||| |||||||| || ||||| ||||||||||| |||||||||||||||    
T  3676744 gtggtcaaacatcagaaagcgtgttcttactatcaatatgcttttataccatttgcttttgaca 3676681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 26770496 - 26770455
Alignment:
Q  38 aaacatgagaaaacgtgttctgacaatcaacatgcttttata 79  Q
    |||||||||||||||||||||||||||| | |||||||||||    
T  26770496 aaacatgagaaaacgtgttctgacaatctatatgcttttata 26770455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 45003019 - 45003063
Alignment:
Q  152 atgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||    
T  45003019 atgcatagcaatgttatgtctcataggaccatgaatgttgtgttt 45003063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 4879547 - 4879601
Alignment:
Q  39 aacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttga 93  Q
    |||||||||||||||||||| |||||||| ||  |||||| |||||||| |||||    
T  4879547 aacatgagaaaacgtgttctaacaatcaaaatatttttatgtcatttgcgtttga 4879601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 196
Target Start/End: Original strand, 45974731 - 45974765
Alignment:
Q  162 atgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||||| ||||||||||||||||||||||    
T  45974731 atgtcatgtctcctaggttcatgaatgttgtgttt 45974765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 27027758 - 27027795
Alignment:
Q  158 agcaatgtcatgtctcataggttcatgaatgttgtgtt 195  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  27027758 agcaatgtcatgtctcctaggtccatgaatgttgtgtt 27027795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 142
Target Start/End: Original strand, 47251789 - 47251893
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 136  Q
    |||| |||||||||| |||||| ||||||  ||||||||||||  ||||| ||||||||||||||  || |||| | |||||   |||||| || |||||    
T  47251789 caaatatgagaaaacatgttctcacaatcctcatgcttttata-aatttgtttttgacattttcgacttcctagcatcagagacggttgacattttacat 47251887  T
Q  137 agagtt 142  Q
    ||||||    
T  47251888 agagtt 47251893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 125; Significance: 1e-64; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 53785814 - 53785650
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||| ||||||||||||||||||||    
T  53785814 gtggccaaacacgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcggtttcctagcaccagaggttgttgaccttc 53785715  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||| |||||    
T  53785714 tacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttatgttt 53785650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 39583231 - 39583395
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||| ||||||||| |||| | || |||||||||||||||    
T  39583231 gtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttatatcatttgttttcgacactttcggtttcctagcatcataggttgttgaccttc 39583330  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    | ||||||||||||| | |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  39583331 tgcatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggttcatgaatgtcgtgttt 39583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 36 - 173
Target Start/End: Original strand, 52741518 - 52741655
Alignment:
Q  36 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctaca 135  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||| |||| ||||||||||||||||||||||||    
T  52741518 ccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacacttttggtttcctagcaccagaggttgttgaccttctaca 52741617  T
Q  136 tagagttcaaaagttcatgcatagcaatgtcatgtctc 173  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  52741618 tagagttcaaaaggtcatgcatagcaatgtcatgtctc 52741655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 32 - 197
Target Start/End: Complemental strand, 44198872 - 44198707
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||| |||||||||  ||  ||| |||| |||||||||||    
T  44198872 gtggccaaacatgagaaagcgtgttctgagaatcaacatgcttttataccatttgcttttgacactttcggtttcttaacacccgaggctgttgaccttc 44198773  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttg 197  Q
    ||||||||||||| ||| | |||||||||||||||||||||| ||||| |||||||||||||||||    
T  44198772 tacatagagttcagaaggttatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtttg 44198707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 32 - 195
Target Start/End: Complemental strand, 32546900 - 32546737
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||||| ||||||| |||||||||||| |||||||| ||||||||||||||| |||| |||| |||| |||| ||| |||||||||||    
T  32546900 gtggccaaacatgagaaagcgtgttcggacaatcaacatacttttataccatttgcttttgacactttcagtttcctagcaccaaaggctgttgaccttc 32546801  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 195  Q
    ||||||||||||||||  |||||||||| ||||||||||||| ||||| |||||||||||||||    
T  32546800 tacatagagttcaaaaagtcatgcatagtaatgtcatgtctcctaggtccatgaatgttgtgtt 32546737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 38 - 196
Target Start/End: Original strand, 37133007 - 37133165
Alignment:
Q  38 aaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 137  Q
    |||||||||||| ||||||||||||||||||||| ||||||| |||||| |||| ||| |||||||||  ||| ||||||||||||||||||||||||||    
T  37133007 aaacatgagaaagcgtgttctgacaatcaacatgtttttataccatttgttttttacactttcggtttcttagcaccagaggttgttgaccttctacata 37133106  T
Q  138 gagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||| |||| |||||||||||||||||||||||| || ||| |||||||||||||||    
T  37133107 gagttctaaaggtcatgcatagcaatgtcatgtctcctaagttaatgaatgttgtgttt 37133165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 26772863 - 26772699
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| || || |||| | ||||||  ||||||||||    
T  26772863 gtggccaaacatcagaaaacgtgttctgacaatcaacatgcttttataccatttgcttttgacacttttggcttcctagcatcagaggcagttgaccttc 26772764  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    || ||||||| |||| | | ||||||| |||||| ||||||| ||||| ||||||||||||||||    
T  26772763 tatatagagtacaaaggattatgcataacaatgttatgtctcctaggtccatgaatgttgtgttt 26772699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 37 - 193
Target Start/End: Original strand, 26856769 - 26856925
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 136  Q
    |||| |||| ||| |||||| |||||||||||||||||||||| ||| ||||||||||  ||||| ||| |||| || ||||  ||||||||||||||||    
T  26856769 caaatatgataaagcgtgttgtgacaatcaacatgcttttataccatctgcttttgacgctttcgatttcctagcactagagactgttgaccttctacat 26856868  T
Q  137 agagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtg 193  Q
    |||||||||| | |||||||||||||||||||||||| |||||| ||||||||||||    
T  26856869 agagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtg 26856925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 54508386 - 54508550
Alignment:
Q  33 tggccaaacatgagaaaa-cgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||| ||||||||||||| | |||||||||||| |||||| ||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||    
T  54508386 tggctaaacatgagaaaaacttgttctgacaattaacatgtttttatatcatttgcttttgacatttttgattttctagcaccagaggttgttgaccttc 54508485  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    | ||||  || |||| | |||||| || |||| |||| |||  ||||| ||||||||||||||||    
T  54508486 tgcataaggtacaaaggatcatgcgtaacaatatcatatctgctaggtccatgaatgttgtgttt 54508550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 37 - 194
Target Start/End: Original strand, 38670887 - 38671044
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 136  Q
    ||||||||||||| |||||||||||||||||||||||||||||  ||||| |||||||| ||| || ||||||| | ||||||  | |||||||||||||    
T  38670887 caaacatgagaaagcgtgttctgacaatcaacatgcttttatacaatttgtttttgacacttttggctttctagcatcagaggcggatgaccttctacat 38670986  T
Q  137 agagt-tcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgt 194  Q
    ||||| | || |||| |||||||||||||| ||||||| ||||| ||||||||||||||    
T  38670987 agagtctaaagagtt-atgcatagcaatgttatgtctcctaggtccatgaatgttgtgt 38671044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 196
Target Start/End: Original strand, 38978809 - 38978965
Alignment:
Q  40 acatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacataga 139  Q
    ||||| |||||||| || |||||||||| ||| |||||||  ||||| |||||||| ||| ||||| |||| ||| ||||  |||||||||||||||| |    
T  38978809 acatgtgaaaacgtattttgacaatcaatatgtttttatactatttgtttttgacacttttggtttcctagcacctgaggccgttgaccttctacatata 38978908  T
Q  140 gttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||| | ||||||| ||||||||||||||||||||| || ||||||||||||    
T  38978909 gttcaaaaggtgatgcataacaatgtcatgtctcataggtttatcaatgttgtgttt 38978965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 3443315 - 3443478
Alignment:
Q  33 tggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttct 132  Q
    ||||||||||||| |||  || |||| |||||||||||||||||||| ||||| || |||||| |||| |||| |||| || ||||||||||||||||||    
T  3443315 tggccaaacatgaaaaagtgtattctaacaatcaacatgcttttataccattttctgttgacactttcagtttcctagcactagaggttgttgaccttct 3443414  T
Q  133 acatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||||||| | |||||| ||| |||||| |||||| ||  |  |||||||||||||||    
T  3443415 acatagagttcaaagggtcatgcgtaggaatgtcttgtctcctaaatctatgaatgttgtgttt 3443478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 42 - 173
Target Start/End: Original strand, 52411903 - 52412034
Alignment:
Q  42 atgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagt 141  Q
    |||||| | ||||||||||||||||||||||||||||  ||||||||||||||| |||| | ||||||  || ||| || ||||||||||||||||||||    
T  52411903 atgagagagcgtgttctgacaatcaacatgcttttattccatttgcttttgacactttcagctttctaacactagatgtcgttgaccttctacatagagt 52412002  T
Q  142 tcaaaagttcatgcatagcaatgtcatgtctc 173  Q
    ||||| | ||||||||| ||||||||||||||    
T  52412003 tcaaagggtcatgcataacaatgtcatgtctc 52412034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 58 - 179
Target Start/End: Complemental strand, 5338722 - 5338601
Alignment:
Q  58 tgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcat 157  Q
    ||||| ||||||||||||||||  |||||||||||||| |||||| || |||| || |||| |||||||| |||||||||||||||||||| |||||| |    
T  5338722 tgacagtcaacatgcttttatacaatttgcttttgacactttcggcttcctagcactagagattgttgacattctacatagagttcaaaaggtcatgcgt 5338623  T
Q  158 agcaatgtcatgtctcataggt 179  Q
    ||||||||| ||||||||||||    
T  5338622 agcaatgtcttgtctcataggt 5338601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 7900956 - 7900799
Alignment:
Q  39 aacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatag 138  Q
    ||||||||||| ||| ||||||||||||||||||||||||| |||||| |||||||| |||||| || |||| | |||||||||||||||||||||||||    
T  7900956 aacatgagaaagcgttttctgacaatcaacatgcttttataccatttgtttttgacactttcggcttcctagcatcagaggttgttgaccttctacatag 7900857  T
Q  139 agttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||  || | | || ||||||||||| |||| || ||||| ||| ||| || |||||    
T  7900856 agtttgaaggattatacatagcaatgttatgtttcctaggtccatcaatattttgttt 7900799  T

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Target: chr3; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 44 - 196
Target Start/End: Complemental strand, 38146149 - 38145997
Alignment:
Q  44 gagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttc 143  Q
    |||| |||||||| |||||||||||||| ||||||| ||||| | ||||||| ||| |  || |||| ||||||||||||| || |||||| ||||||||    
T  38146149 gagacaacgtgttttgacaatcaacatgtttttataccatttacatttgacacttttgacttcctagcaccagaggttgtttacattctacttagagttc 38146050  T
Q  144 aaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||| | ||||||||| |||||||||||||| ||||| |||||| |||||||||    
T  38146049 aaagggtcatgcataacaatgtcatgtctcctaggtccatgaacgttgtgttt 38145997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 37 - 173
Target Start/End: Complemental strand, 51234716 - 51234580
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 136  Q
    ||||||||| ||| | |||| |||||| ||||||||||||||| |||||  |||||||| |||||  ||||||| | |||||||||||||||||||||||    
T  51234716 caaacatgaaaaagcatgttatgacaaccaacatgcttttataccatttatttttgacactttcgactttctagcatcagaggttgttgaccttctacat 51234617  T
Q  137 agagttcaaaagttcatgcatagcaatgtcatgtctc 173  Q
    |||||||||||| | ||||||| |||||| |||||||    
T  51234616 agagttcaaaaggttatgcataacaatgttatgtctc 51234580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 7502013 - 7502176
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgctttt-atatcatttgcttttgacattttcggttttctagtaccagaggttgttgacctt 130  Q
    |||| ||||||||||||| |||||||  |||||||||||| |||| ||| ||||| ||||||||||||| ||||| |||| |||||||||||||||||||    
T  7502013 gtggtcaaacatgagaaagcgtgttcgaacaatcaacatgttttttataccattttcttttgacatttttggtttcctagcaccagaggttgttgacctt 7502112  T
Q  131 ctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||  |||||| ||| | ||||||| | |||||||||| ||||||| | ||||||| || |||||    
T  7502113 ctac--agagtttaaagggtcatgcacaacaatgtcatgactcatagatccatgaatattatgttt 7502176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 46940772 - 46940939
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgacc--- 128  Q
    |||||||||||| ||||||| ||||| ||||||||||||||||||||| |||||| |||||||| ||| |   | |||| |||| ||  | ||||||       
T  46940772 gtggccaaacattagaaaacatgttccgacaatcaacatgcttttataccatttgtttttgacacttttgacgtcctagcaccatagactattgaccagc 46940871  T
Q  129 ttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||||||||||| | |||||||   |||||||||| ||||||||||||||||||||||||||    
T  46940872 ttctacatagagttcaaaggatcatgcacgacaatgtcatgactcataggttcatgaatgttgtgttt 46940939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 37 - 196
Target Start/End: Complemental strand, 13582609 - 13582451
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 136  Q
    ||||||| |||||  ||||||||||||||||| || ||||||| |||||| |||| ||| ||| | ||| |||| ||||    ||||||||||||||||     
T  13582609 caaacataagaaagtgtgttctgacaatcaacgtgtttttataccatttgttttt-acacttttgatttcctagcaccaacaattgttgaccttctacag 13582511  T
Q  137 agagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||||| ||||||||| |||||||||||||| ||||  ||||||||||||||||    
T  13582510 agagttcaaaaggtcatgcataacaatgtcatgtctcctaggaccatgaatgttgtgttt 13582451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 36 - 196
Target Start/End: Complemental strand, 49018064 - 49017908
Alignment:
Q  36 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctaca 135  Q
    ||||||||||||||  ||||||| |||||||||||| ||||||| |||||  |||| ||| ||||||||| |||| ||| ||||||||||| |||||||     
T  49018064 ccaaacatgagaaagtgtgttctaacaatcaacatgtttttataccattttttttttacactttcggtttcctagcacccgaggttgttgatcttctacg 49017965  T
Q  136 tagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    || |||||||||| |||||||||  ||||||||||    |||||  |||||||||||||||    
T  49017964 taaagttcaaaaggtcatgcatataaatgtcatgt----taggtcaatgaatgttgtgttt 49017908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 21552766 - 21552605
Alignment:
Q  38 aaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 137  Q
    ||||||| ||||| || || |||||||||||||||||| ||| |||||  ||||||||||||| |||| |||| | |||||  |||||||||||||||||    
T  21552766 aaacatgggaaaatgtattatgacaatcaacatgcttt-ataccatttatttttgacattttcagtttcctagcatcagagactgttgaccttctacata 21552668  T
Q  138 gagttcaaaagttcatgcatagca----atgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||||| |||||||||| |    || |||| |||| ||||| ||||||||||||||||    
T  21552667 gagttcaaaaggtcatgcatagtacgtaatatcatatctcctaggtccatgaatgttgtgttt 21552605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 36 - 196
Target Start/End: Complemental strand, 37992433 - 37992274
Alignment:
Q  36 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctaca 135  Q
    ||||||||||| || | ||||||||||||||||||| ||||||||||||| |||||||   ||| || ||  ||| || |||||||||||||||||||||    
T  37992433 ccaaacatgaggaagcatgttctgacaatcaacatgattttatatcatttacttttgatggttttggcttcatagcactagaggttgttgaccttctaca 37992334  T
Q  136 tagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
     ||||||| || | ||||||| || ||||||||| ||| || || ||||||||||||||||    
T  37992333 aagagttc-aagggtcatgcacagtaatgtcatgactcgtacgtgcatgaatgttgtgttt 37992274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 44860 - 44781
Alignment:
Q  113 ccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgt 192  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||| ||||||||||||    
T  44860 ccagaggctgttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtttcctaggtccatgaatgttgt 44781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 38 - 167
Target Start/End: Complemental strand, 25325130 - 25324999
Alignment:
Q  38 aaacatgagaaaacgtgttctgacaatcaacat--gcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctaca 135  Q
    |||||| | ||||||| || || ||||||||||  | ||||||| ||||||||||  ||| ||||| ||| |||| |||| || ||||||||||||||||    
T  25325130 aaacattataaaacgtattttggcaatcaacatatgtttttataccatttgctttcaacactttcgatttcctagcaccatagattgttgaccttctaca 25325031  T
Q  136 tagagttcaaaagttcatgcatagcaatgtca 167  Q
    ||||||||||| | ||||||||||||||||||    
T  25325030 tagagttcaaatgatcatgcatagcaatgtca 25324999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 4473160 - 4473003
Alignment:
Q  38 aaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 137  Q
    |||||||| ||| |||||||| || ||||| ||| |||||||  ||||| |||||||| |||||| || |||| ||||||  || || ||||||||||||    
T  4473160 aaacatgaaaaagcgtgttctaaccatcaatatgtttttatactatttgtttttgacactttcggcttcctagcaccagaa-ttcttaaccttctacata 4473062  T
Q  138 gagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
     ||||||||   |||||||||||||| ||||||||| |||||  |||||| ||||||||    
T  4473061 aagttcaaagaatcatgcatagcaatttcatgtctcctaggtctatgaatattgtgttt 4473003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 4763888 - 4763958
Alignment:
Q  125 gaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||| | ||| ||||||||||||||||    
T  4763888 gaccttctacatagagttcaaaaggttatgcatagcaatgtcatgtctcct-ggtccatgaatgttgtgttt 4763958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 3376748 - 3376848
Alignment:
Q  38 aaacatgagaaaacgtgttctgacaatcaacatgcttt-tatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 136  Q
    |||||||| ||||| | |||| |||||||||||  ||| || | |||||||||||||| |||| ||||| |||| || ||||||||||||||||||||||    
T  3376748 aaacatgataaaacatattctcacaatcaacatattttatagaccatttgcttttgacttttttggtttcctagcactagaggttgttgaccttctacat 3376847  T
Q  137 a 137  Q
    |    
T  3376848 a 3376848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 195
Target Start/End: Original strand, 25094665 - 25094737
Alignment:
Q  123 ttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 195  Q
    ||||||||||||||| |||||||| | |||||||||||||||| || |||  || || |||||||||||||||    
T  25094665 ttgaccttctacatatagttcaaatggtcatgcatagcaatgtaatatcttttaagtccatgaatgttgtgtt 25094737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 3643149 - 3643086
Alignment:
Q  139 agttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttgatgat 202  Q
    |||||||| | ||||||||| ||||||||||| |  ||||| ||||||||||||||||||||||    
T  3643149 agttcaaaggatcatgcataacaatgtcatgttttttaggtccatgaatgttgtgtttgatgat 3643086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 196
Target Start/End: Complemental strand, 43123229 - 43123086
Alignment:
Q  53 tgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttca 152  Q
    ||||||||||||||||||| | |||||  |||| |  |||||| ||| | |||||||| |||| || |||||||| ||||||| | |||||||| | ||     
T  43123229 tgttctgacaatcaacatgttgttatactatttacgattgacacttttgattttctagcaccatagtttgttgactttctacaaaaagttcaaagggtcg 43123130  T
Q  153 tgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||| ||| | |||||| ||||||  || ||| ||||||||    
T  43123129 tgcatagaaatattatgtcttataggtcaataaatattgtgttt 43123086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 464977 - 465047
Alignment:
Q  126 accttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||||| |||||| ||  ||||||||| |||| | |||| |||||| ||||||||||||||||||    
T  464977 accttctacatatagttcataaagtcatgcataacaatattatgtttcatagattcatgaatgttgtgttt 465047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 4669086 - 4669130
Alignment:
Q  119 gttgttgaccttctacatagagttcaaaagttcatgcatagcaat 163  Q
    |||||||||||||||||||||||||| ||| ||||||||| ||||    
T  4669086 gttgttgaccttctacatagagttcagaagatcatgcataacaat 4669130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 13772549 - 13772491
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgaca 95  Q
    |||||||||||||||||||||   |||||||||  |||||||| ||||||| |||||||    
T  13772549 caaacatgagaaaacgtgttccatcaatcaacacacttttataccatttgcgtttgaca 13772491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 1e-61; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 32 - 195
Target Start/End: Original strand, 4413068 - 4413231
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||| ||||||| ||||||||||||    
T  4413068 gtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcggtttcctagcaccagagattgttgaccttc 4413167  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 195  Q
    ||||||| ||||||||| ||||||||||||| |||||||||| ||||| |||||||||||||||    
T  4413168 tacatagggttcaaaaggtcatgcatagcaaagtcatgtctcctaggtccatgaatgttgtgtt 4413231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 17344743 - 17344579
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    ||||||||||| ||||||||||||| | |||||||||||||||||||| ||||||||||||||| |||| |||| |||| |||| ||| |||||||||||    
T  17344743 gtggccaaacacgagaaaacgtgttttcacaatcaacatgcttttataccatttgcttttgacactttcagtttcctagcaccataggctgttgaccttc 17344644  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||||||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  17344643 tacatagagttcaaaaggtcatgcataacaatgtcatgtctcctaggtccatgaatgttgtgttt 17344579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 41867910 - 41868074
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||| ||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| |||||| || |||| |||||||| |||||||||||    
T  41867910 gtggtcaaacatgagaaagcatgttctgacaatcaacatgcttttataccatttgcttttgacactttcgggttcctagcaccagaggctgttgaccttc 41868009  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||||||||||| ||||||||| ||||||||||||||  |||| ||||||||||||||||    
T  41868010 tacatagagttcaaaaggtcatgcataacaatgtcatgtctcccaggtccatgaatgttgtgttt 41868074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 18744956 - 18745120
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    ||||||||||| |||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||| |||| ||| ||||| |||||    
T  18744956 gtggccaaacacgagaaagcgtgttctgacaatcaacatacttttataccatttgcttttgacattttcgattttctagcaccataggctgttggccttc 18745055  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||||||||||| ||||||||||||||||||| | || |||||  |||||||||||||||    
T  18745056 tacatagagttcaaaagatcatgcatagcaatgtcatatttcctaggtctatgaatgttgtgttt 18745120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 32 - 195
Target Start/End: Original strand, 9685417 - 9685580
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||| ||| | |||||||| || ||||| ||| |||||||    
T  9685417 gtggccaaacatgaaaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacacttttgattttctagcactagaggctgtggaccttc 9685516  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 195  Q
    || |||||||||||||| ||||| |||||||||||||||||| ||||| |||||||||||||||    
T  9685517 tatatagagttcaaaaggtcatggatagcaatgtcatgtctcctaggtccatgaatgttgtgtt 9685580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 19161785 - 19161949
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||| ||||||||| ||| ||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||| ||  || ||||| || | |||||     
T  19161785 gtgggcaaacatgaaaaagcgtgttctgacaatcaacatgtttttataccatttgcttttgacactttcggttttgtaacactagaggctgcttaccttt 19161884  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||||||||||| ||||||||| |||||||||||||| |||||  ||||||  |||||||    
T  19161885 tacatagagttcaaaaggtcatgcatatcaatgtcatgtctcctaggtcaatgaatagtgtgttt 19161949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 36 - 196
Target Start/End: Complemental strand, 28225101 - 28224941
Alignment:
Q  36 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctaca 135  Q
    ||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||||| |||||| || ||||   ||||||||||||||||||||||    
T  28225101 ccaaatatgagaaagcgtattctgacaatcaacatgcttttataccatttgcttttgacactttcggcttcctagcttcagaggttgttgaccttctaca 28225002  T
Q  136 tagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||| |||| | | ||||||  |||| | ||||||| |||||  |||||||||||||||    
T  28225001 tagagtccaaaggattatgcatgacaatattatgtctcctaggtcaatgaatgttgtgttt 28224941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 31 - 196
Target Start/End: Complemental strand, 44686526 - 44686357
Alignment:
Q  31 tgtggccaaacatgagaaaacgtgttctgacaatcaa----catgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttga 126  Q
    ||||||||||||||||||| |||||||||||||||||    |||||||||||||  || |||||||||| |||||| || |||| | ||||| |||||||    
T  44686526 tgtggccaaacatgagaaagcgtgttctgacaatcaatcaacatgcttttatattgttcgcttttgacactttcggcttcctagcatcagagtttgttga 44686427  T
Q  127 ccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||||||| | |||| | | |||||||||||||| ||||||| ||||| | ||||||||||||||    
T  44686426 ccttctacatagattccaaagggttatgcatagcaatgttatgtctcctaggtccgtgaatgttgtgttt 44686357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 81 - 196
Target Start/End: Complemental strand, 13413407 - 13413292
Alignment:
Q  81 catttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggtt 180  Q
    |||||| |||||||| ||||||||||| || | |||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||     
T  13413407 catttgtttttgacactttcggttttcaagcagcagaggctgttgaccttctacatagagttcaaaaggtcatgcataacaatgtcatgtctcctaggtc 13413308  T
Q  181 catgaatgttgtgttt 196  Q
    ||||||||||||||||    
T  13413307 catgaatgttgtgttt 13413292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 37 - 179
Target Start/End: Original strand, 34814826 - 34814967
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 136  Q
    ||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||| |||||| || |||  |||||||  ||||||||||||||||    
T  34814826 caaacatgagaaagcgtgttctgacaatcaatatgcttttataccatttgctttcgacactttcgg-ttcctaacaccagagactgttgaccttctacat 34814924  T
Q  137 agagttcaaaagttcatgcatagcaatgtcatgtctcataggt 179  Q
    |||||||||| | ||||||||| |||||| ||||||| |||||    
T  34814925 agagttcaaatggtcatgcataacaatgttatgtctcttaggt 34814967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 58 - 179
Target Start/End: Original strand, 20142753 - 20142874
Alignment:
Q  58 tgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcat 157  Q
    |||||||||||||||||||||| ||||| ||||||||| ||| |||||||||| | || |||||||||||||| ||||||||||||||||| |||| |||    
T  20142753 tgacaatcaacatgcttttataccattttcttttgacacttttggttttctagcatcaaaggttgttgaccttatacatagagttcaaaaggtcatacat 20142852  T
Q  158 agcaatgtcatgtctcataggt 179  Q
    | |||||||||||||| |||||    
T  20142853 aacaatgtcatgtctcctaggt 20142874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 189
Target Start/End: Complemental strand, 5532524 - 5532368
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||  |||| ||||||||| |||  | || |||| |||| |||||||||| ||||    
T  5532524 gtggtcaaacatgagaaaacgtgttgtgacaatcaacatgcttttatactatttacttttgacacttt-agcttcctagcaccataggttgttgagcttc 5532426  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgt 189  Q
    ||||||||||||||| | ||||||| | ||||| |||| ||| || ||||||||||||    
T  5532425 tacatagagttcaaagggtcatgcacaacaatgccatgactcctaagttcatgaatgt 5532368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 52 - 196
Target Start/End: Original strand, 2886637 - 2886780
Alignment:
Q  52 gtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttc 151  Q
    |||||||||||||||||||| |||||||||||||| |||||| ||||||||||| | || | |||||| |||||| ||| |||||||||||||||||  |    
T  2886637 gtgttctgacaatcaacatgtttttatatcatttgtttttgatattttcggtttccaagcatcagaggctgttgatcttttacatagagttcaaaagagc 2886736  T
Q  152 atgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||||| |||| |||| | ||| ||| ||||||||||||    
T  2886737 atgcatagcaatatcatatctcgt-ggtccataaatgttgtgttt 2886780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 16351843 - 16352010
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttc---ggttttctagtaccagaggttgttgacc 128  Q
    |||| |||||||||||||| ||||||| |||||||||||  ||||||||  |||||||||||||||||    || | | ||  | |||||||||||||||    
T  16351843 gtggtcaaacatgagaaaatgtgttctcacaatcaacataattttatattgtttgcttttgacattttgtttggctctttatcatcagaggttgttgacc 16351942  T
Q  129 ttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||||||||||| | ||||||| | |||||||||||||| ||||| ||||||| || |||||    
T  16351943 ttctacatagagttcaaatggtcatgcacaacaatgtcatgtctcttaggtacatgaatattatgttt 16352010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 7760848 - 7761008
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||| |||||||||||||| ||| ||||||| |||  |||  ||  |||||| || ||||  || |||||||||  ||||||||||||||||||||    
T  7760848 gtggccaatcatgagaaaacgtgatctaacaatca-catattttcttacgatttgcattagacacctttggttttctatcaccagaggttgttgaccttc 7760946  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtg 193  Q
    ||||||||||||||| | |||||| ||||||||| |||||||||| ||||| ||||| ||||    
T  7760947 tacatagagttcaaaggatcatgcgtagcaatgtgatgtctcataagttcaagaatgatgtg 7761008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 32 - 173
Target Start/End: Complemental strand, 2888621 - 2888480
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||| |||| | || ||||| ||| || || |||  || |||||||||||||||||    
T  2888621 gtggacaaacatgagaaaacgtgttctgacaatcaacatgtttttataccattcgtttatgacacttttggcttcctaacacaagaggttgttgaccttc 2888522  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctc 173  Q
    |||| |  ||||||||  ||||||| | ||||||||| ||||    
T  2888521 tacacaaggttcaaaatgtcatgcacaacaatgtcatatctc 2888480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 23484940 - 23485102
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    ||||||||| |||||||| | ||||||||||||||||||||||||||| |||||| ||||||||  ||| |||| |||| |||||| |    |||| |      
T  23484940 gtggccaaatatgagaaagcatgttctgacaatcaacatgcttttataccatttgtttttgaca-cttctgtttcctagcaccaga-gacaatgacttct 23485037  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||||||||||| ||||||||| |||||  ||||||| ||||| |||||| |||||||||    
T  23485038 tacatagagttcaaaagatcatgcataacaatgctatgtctcctaggtccatgaacgttgtgttt 23485102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 52 - 196
Target Start/End: Original strand, 32029108 - 32029252
Alignment:
Q  52 gtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttc 151  Q
    |||||| ||||||||||||||||| |||||||||| |||||||| |||| | || | |    |||||| ||||||||||||||||||||||||||   ||    
T  32029108 gtgttcagacaatcaacatgctttcatatcatttgtttttgacactttcagcttcccaacttcagaggctgttgaccttctacatagagttcaaagagtc 32029207  T
Q  152 atgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    || |||| ||||||||||||| ||||| |||||||| | ||||||    
T  32029208 atccataacaatgtcatgtcttataggatcatgaatatcgtgttt 32029252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 27502467 - 27502303
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgctttt-gacattttcggttttctagtaccagaggttgttgacctt 130  Q
    |||| ||||||||||||||||||||| ||||| ||||||||||||||| || |||||||| |||| |||||  || |||| | || |   ||||||||||    
T  27502467 gtggtcaaacatgagaaaacgtgttccgacaaacaacatgcttttata-caattgctttttgacactttcgacttcctagcatcatatactgttgacctt 27502369  T
Q  131 ctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||| | |||| | | |||||||||||| ||||||||| ||| |  |||||||||||||||    
T  27502368 ctacatagaatccaaagggttatgcatagcaatatcatgtctcctagatctatgaatgttgtgttt 27502303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 38 - 197
Target Start/End: Original strand, 33612555 - 33612712
Alignment:
Q  38 aaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 137  Q
    ||||||||||||||||||| |||||||||||||| |||||||  |||||  ||||||| ||| || || |||  ||| |||||||||||| |||||||      
T  33612555 aaacatgagaaaacgtgttttgacaatcaacatgattttatacaatttgtatttgacacttttggcttcctaacaccggaggttgttgacattctaca-- 33612652  T
Q  138 gagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttg 197  Q
    ||||||| | | ||   |||||||||||| |||| | ||||| |||||||||||||||||    
T  33612653 gagttcagagggtcgctcatagcaatgtcttgtcccctaggtccatgaatgttgtgtttg 33612712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 57 - 196
Target Start/End: Complemental strand, 3825806 - 3825667
Alignment:
Q  57 ctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgca 156  Q
    ||||||||| ||||| |||||| ||||||||||  |||| ||||  ||| |||| | || ||||||||||||||| |||| |||||||||   |||||||    
T  3825806 ctgacaatctacatgtttttatttcatttgcttcagacactttcaatttcctagcatcaaaggttgttgaccttcaacatcgagttcaaagaatcatgca 3825707  T
Q  157 tagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||||||||||  ||||  ||| ||||||||||||    
T  3825706 tagcaatgtcatgtcttctaggaccataaatgttgtgttt 3825667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 32 - 192
Target Start/End: Original strand, 13147099 - 13147262
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacat---gcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgacc 128  Q
    |||| ||||||||||||| |||||||||||||||| |||     ||||||| |||||| |||||||| ||| |||||||||  ||||||| |||||||||    
T  13147099 gtggtcaaacatgagaaagcgtgttctgacaatcagcatatactttttataccatttgattttgacacttttggttttctaacaccagagattgttgacc 13147198  T
Q  129 ttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgt 192  Q
    |||| |||| ||| |||| | || |||| | ||||||| |||||  || |||||||||| ||||    
T  13147199 ttcttcatatagtacaaagggtcgtgcacaacaatgtcttgtcttctaagttcatgaatattgt 13147262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 38 - 146
Target Start/End: Original strand, 11921218 - 11921326
Alignment:
Q  38 aaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 137  Q
    |||||| ||||||||||||||||||||||||||  ||||||| | |||| |||| | | ||||  |||||| ||| || ||  |||||||||||||||||    
T  11921218 aaacattagaaaacgtgttctgacaatcaacatatttttataccgtttgttttttatactttcaattttctggtatcatagactgttgaccttctacata 11921317  T
Q  138 gagttcaaa 146  Q
    |||||||||    
T  11921318 gagttcaaa 11921326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 44720427 - 44720263
Alignment:
Q  33 tggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgaca-ttttcggttttctagtaccagaggttgttgaccttc 131  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||| | ||||  ||| ||| ||||  | || |||  ||||||||||||| || ||     
T  44720427 tggccaaacatgaaaaaacgtgttatgacaatcaacatgtttttataccgtttgaatttaacatttttttgcttcctaacaccagaggttgttcactttt 44720328  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||| |||||||| | ||||||||| |||| |  | |||||||||| ||| |||  |||||||    
T  44720327 tacataaagttcaaaggatcatgcataacaatattttatctcataggtccataaataatgtgttt 44720263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 142
Target Start/End: Complemental strand, 29808175 - 29808070
Alignment:
Q  36 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctaca 135  Q
    |||||||||||| | |||||| | |||||||||||| ||||||| ||||||||||| ||||| |   ||| |||| | | ||||||||||||||| ||||    
T  29808175 ccaaacatgagacagcgtgttataacaatcaacatg-ttttataccatttgcttttcacattatttatttcctagcatcggaggttgttgaccttttaca 29808077  T
Q  136 tagagtt 142  Q
    |||||||    
T  29808076 tagagtt 29808070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 165
Target Start/End: Original strand, 3968411 - 3968544
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||| |||| |||||||||| |||| |||||||||| |||||||||||  |||||| ||||||||||| |  ||  ||||| | ||| ||||| ||||||    
T  3968411 gtggtcaaatatgagaaaacatgttttgacaatcaatatgcttttatacaatttgcgtttgacatttttgacttcatagtatctgagtttgttaaccttc 3968510  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgt 165  Q
    || | | |||||||| | ||| ||||| ||||||    
T  3968511 tataaaaagttcaaaggatcacgcataacaatgt 3968544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 44684955 - 44685024
Alignment:
Q  127 ccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||||||||||||| | ||||||||| |||| | |||||| ||| || ||||||||||||||||    
T  44684955 ccttctacatagagttcaaagggtcatgcataacaatattatgtcttataagtccatgaatgttgtgttt 44685024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 179
Target Start/End: Original strand, 8036566 - 8036633
Alignment:
Q  114 cagaggttgttgaccttctacatagagttcaaaagttcatgc--atagcaatgtcatgtctcataggt 179  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||  ||| |||||||||||||| |||||    
T  8036566 cagaggttgttgaccttttacatagagttcaaaggtttatgcatatatcaatgtcatgtctcctaggt 8036633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 1296053 - 1296099
Alignment:
Q  33 tggccaaacatgagaaaacgtgttctgacaatcaacatgcttttata 79  Q
    ||||||||||||||||||  |||||||||||| |||||| |||||||    
T  1296053 tggccaaacatgagaaaatatgttctgacaataaacatgtttttata 1296099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 117; Significance: 9e-60; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 32 - 192
Target Start/End: Complemental strand, 6439 - 6279
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||| |||| |||| |||| |||||||| |||||||||||    
T  6439 gtggccaaacatgagaaagcgtgttctgacaatcaacatgcttctataccatttgcttttgacactttcagtttcctagcaccagaggctgttgaccttc 6340  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgt 192  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||    
T  6339 tacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgt 6279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 9e-60; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 38815399 - 38815235
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||| | || |||| |||||||| |||||||||||    
T  38815399 gtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttccgcttcctagcaccagagggtgttgaccttc 38815300  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  38815299 tacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttt 38815235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 24125132 - 24124969
Alignment:
Q  33 tggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttct 132  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||| ||| | ||| |||| |||||||||||||| ||||||    
T  24125132 tggccaaacatgagaaagcgtgctctgacaatcaacatgcttttataccatttgcttttgacaattttgatttcctagcaccagaggttgttggccttct 24125033  T
Q  133 acatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  24125032 acataaagttcaaaaggtcatgcatagcaatgtcatgtctcataggtccatgaatgttgtgttt 24124969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 6592680 - 6592517
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||||| |||||||| |||||||||||| ||||| | ||||||||||||||| |||| |||| ||||  |||||||||||||||||||    
T  6592680 gtggccaaacatgagaaagcgtgttctcacaatcaacatgattttaaaccatttgcttttgacactttcagtttcctagctccagaggttgttgaccttc 6592581  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    | ||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||    
T  6592580 tgcatagagttcaaaaggtcatgcata-taatgtcatgtctcataggttcatgaatgttgtgttt 6592517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 32 - 166
Target Start/End: Complemental strand, 500332 - 500199
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||  ||||| ||||| |||||    
T  500332 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttataccatttacttttgacattttcggtttcctagtatgagagg-tgttggccttc 500234  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtc 166  Q
    ||||||||||||||||| ||||||||| |||||||    
T  500233 tacatagagttcaaaaggtcatgcatatcaatgtc 500199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 3188074 - 3187911
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    ||||| ||||||||| || ||||||||||||||||||||||||||||| ||||||||||||| | |||||| || |||| | ||||||||||| ||||||    
T  3188074 gtggcaaaacatgaggaagcgtgttctgacaatcaacatgcttttataccatttgcttttgaaactttcggcttcctagcatcagaggttgttaaccttc 3187975  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||| ||||| | | |||||||||||||| ||||||| ||||| ||||||||||||||||    
T  3187974 tacatagag-tcaaagggttatgcatagcaatgttatgtctcctaggtccatgaatgttgtgttt 3187911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 32 - 180
Target Start/End: Original strand, 35739988 - 35740136
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||||| || |||||||||||||||||| |||||||  ||| |||||||||| |||| |||| |||| ||||||| ||||||||||||    
T  35739988 gtggccaaacatgagaaagcgggttctgacaatcaacatgtttttatacaattagcttttgacactttcagtttcctagcaccagagattgttgaccttc 35740087  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggtt 180  Q
    ||||||||||||||||  ||||||||| |||||||||||| | ||||||    
T  35740088 tacatagagttcaaaaagtcatgcataacaatgtcatgtcccctaggtt 35740136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 6618383 - 6618226
Alignment:
Q  38 aaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 137  Q
    |||||||||||| |||||||| |||||||||||| ||||| | ||||||||||||||| |||| |||| ||||  |||||| ||||||||||| | ||||    
T  6618383 aaacatgagaaagcgtgttctcacaatcaacatgattttaaaccatttgcttttgacactttcagtttcctagctccagagattgttgaccttttgcata 6618284  T
Q  138 gagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    | ||||||||| |||||||||  ||||||||||||||||||| |||||||||| |||||    
T  6618283 gcgttcaaaaggtcatgcata-taatgtcatgtctcataggtccatgaatgttatgttt 6618226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 39434772 - 39434608
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| ||| |  || |||| | ||||||   |||| ||||    
T  39434772 gtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgtttttgacacttttgacttcctagcatcagaggcatttgatcttc 39434673  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||| |||| | | ||||||| |||||| ||||||| ||| | ||||||||||||||||    
T  39434672 tacatagagtccaaagggttatgcatatcaatgtaatgtctcttagatccatgaatgttgtgttt 39434608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 60 - 192
Target Start/End: Complemental strand, 37514298 - 37514166
Alignment:
Q  60 acaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatag 159  Q
    ||||||||||||| ||||||  |||||||||||||| ||||  ||| ||||  ||||||| |||||||||||||||||||||||||||| |||||||||     
T  37514298 acaatcaacatgcgtttatactatttgcttttgacactttcaatttcctagcgccagaggctgttgaccttctacatagagttcaaaaggtcatgcatat 37514199  T
Q  160 caatgtcatgtctcataggttcatgaatgttgt 192  Q
    |||||| | ||||| ||||| ||||||||||||    
T  37514198 caatgttacgtctcttaggtccatgaatgttgt 37514166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 88 - 195
Target Start/End: Original strand, 22589395 - 22589501
Alignment:
Q  88 ttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaat 187  Q
    |||||||| ||||||||| |||| |||||||| ||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||    
T  22589395 ttttgacactttcggtttcctagcaccagaggctgttgacttt-tacatagagttcaaaaggtcatgcatagcaatgtcatgtctcataggtctatgaat 22589493  T
Q  188 gttgtgtt 195  Q
    ||||||||    
T  22589494 gttgtgtt 22589501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 42 - 196
Target Start/End: Original strand, 25021826 - 25021980
Alignment:
Q  42 atgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagt 141  Q
    ||||||||  ||||||| |||||||||||| ||||||| ||||| ||||||||||||| || || |||| ||||||||||||||||| || ||| | |||    
T  25021826 atgagaaagtgtgttctcacaatcaacatgtttttataccattttcttttgacatttttggcttcctagcaccagaggttgttgaccatccacacaaagt 25021925  T
Q  142 tcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||| | ||||||| | ||||||||| |||| ||||| || |||||||||||||    
T  25021926 tcaaagggtcatgcacaacaatgtcatatctcctaggtccaggaatgttgtgttt 25021980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 107 - 196
Target Start/End: Complemental strand, 3821254 - 3821165
Alignment:
Q  107 ctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||| ||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||| ||||||||| |||||| |||||    
T  3821254 ctagaaccagaggttgttgaccttctacatagagttcaaagggtaatgcatagcaatgtcatgtctcctaggttcataaatgttatgttt 3821165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 146
Target Start/End: Complemental strand, 8882432 - 8882319
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||| | |||||| |||||| | |||| ||||||||| ||||||||||||||| | |     
T  8882432 gtggccaaacatgagaaagcgtgttctgacaatcaatatgcttttaaaccatttgtttttga-actttcagttttctagcaccagaggttgttgaacatt 8882334  T
Q  132 tacatagagttcaaa 146  Q
     ||||||||||||||    
T  8882333 cacatagagttcaaa 8882319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 28196291 - 28196133
Alignment:
Q  38 aaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 137  Q
    ||||||||||||  ||||| ||| ||| |||||| ||||||| |||||| |||||||| ||| |  || |||| |||| |||||||||||| ||||| ||    
T  28196291 aaacatgagaaagtgtgttatgataataaacatgtttttataccatttgtttttgacacttttgtcttcctagcaccataggttgttgaccatctacgta 28196192  T
Q  138 gagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||| | ||||||| | |||||||||||||| ||| | || | |||||||||||    
T  28196191 gagttcaaaggatcatgcacaacaatgtcatgtctcctagatccacggatgttgtgttt 28196133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 4073640 - 4073475
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggt-tttctagtaccagaggttgttgacctt 130  Q
    |||| |||||| ||||||||||||| |  ||||||||||| |||||||  |||||| ||||||| ||| |   ||| |||||||||||||||||||||||    
T  4073640 gtggtcaaacaagagaaaacgtgttttaccaatcaacatgattttatacaatttgcatttgacacttttgccatttttagtaccagaggttgttgacctt 4073541  T
Q  131 ctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||| |||  ||||    ||||||||||||||||||||| ||  || | | ||||||||||||||    
T  4073540 ctacagagaaatcaatgagtcatgcatagcaatgtcatgtttccaagatccgtgaatgttgtgttt 4073475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 37 - 146
Target Start/End: Complemental strand, 8619914 - 8619805
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 136  Q
    ||||||||| ||| ||| || ||||||||||| |||||||||| |||||| |||| ||||||| || ||||||  |||||||||||||||| ||| ||||    
T  8619914 caaacatgaaaaagcgtattttgacaatcaacgtgcttttataccatttgtttttaacatttttggctttctaacaccagaggttgttgactttcgacat 8619815  T
Q  137 agagttcaaa 146  Q
    |||| |||||    
T  8619814 agagctcaaa 8619805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 107 - 182
Target Start/End: Complemental strand, 18804642 - 18804567
Alignment:
Q  107 ctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttca 182  Q
    |||| |||||||| ||||||||||||||||||| |||||||| ||||||||| |||||||||| ||| ||||||||    
T  18804642 ctagcaccagaggctgttgaccttctacatagatttcaaaaggtcatgcataacaatgtcatgactcctaggttca 18804567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 32 - 190
Target Start/End: Original strand, 39671173 - 39671332
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttg-acattttcggttttctagtaccagaggttgttgacctt 130  Q
    ||||||||||  |||||| |||||| ||||||| |||||| |||||||  ||||  ||||  |||||||||| || |||| ||||||||||||| |||||    
T  39671173 gtggccaaaccagagaaagcgtgttttgacaattaacatgtttttatacaatttatttttttacattttcggcttcctagcaccagaggttgttaacctt 39671272  T
Q  131 ctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgtt 190  Q
     ||| ||||||| ||| | ||||| |||  ||||||||||||| ||| | ||||||||||    
T  39671273 ttacgtagagttaaaagggtcatgaataaaaatgtcatgtctcctagatccatgaatgtt 39671332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 8115916 - 8115779
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||| ||||| | ||||| | |||||| | |||||| || |||||||| ||||||| ||||||| ||| |||||| ||  |  |||||||||||||||||    
T  8115916 gtggtcaaacgtaagaaatcttgttctaataatcaatatacttttataccatttgcatttgacacttttggttttttaa-atgagaggttgttgaccttc 8115818  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgt 170  Q
    |||||| |||||||| | |||||||| ||||||||||||    
T  8115817 tacataaagttcaaaggatcatgcattgcaatgtcatgt 8115779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 168
Target Start/End: Complemental strand, 3863387 - 3863286
Alignment:
Q  67 acatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtc 166  Q
    ||||||||||||  ||||||| | ||||| ||| || || |||| |||||||||| |||||||||||||||||||||||| | |  ||||||||||||||    
T  3863387 acatgcttttattccatttgcatgtgacacttttggcttcctaggaccagaggttattgaccttctacatagagttcaaagggtagtgcatagcaatgtc 3863288  T
Q  167 at 168  Q
    ||    
T  3863287 at 3863286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 40223480 - 40223541
Alignment:
Q  107 ctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcat 168  Q
    |||| ||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  40223480 ctagcaccggaggttgttgaccttctacatagagttcaaaaggtcatgcataacaatgtcat 40223541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 73 - 196
Target Start/End: Complemental strand, 43824053 - 43823930
Alignment:
Q  73 ttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtct 172  Q
    ||||||| ||||||||||||||| ||| || || || | |  ||||| | ||||||||  |||||||||||||| | |||||||||||||||||||||||    
T  43824053 ttttataccatttgcttttgacacttttggcttccttgcattagaggctattgacctttcacatagagttcaaatggtcatgcatagcaatgtcatgtct 43823954  T
Q  173 cataggttcatgaatgttgtgttt 196  Q
    |  || | ||| ||||||||||||    
T  43823953 ccgagatccattaatgttgtgttt 43823930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 10189643 - 10189581
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacatttt 99  Q
    |||||| |||||| | ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  10189643 caaacaagagaaagcatgttctgacaatcaacatgtttttatatcatttgcatttgacatttt 10189581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 196
Target Start/End: Complemental strand, 3825705 - 3825576
Alignment:
Q  67 acatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtc 166  Q
    ||||||||||||  ||||||| | |||||  || || || |||| |||| ||||||||||||||||||| ||| ||||||   | ||||||||||| |||    
T  3825705 acatgcttttattccatttgcatgtgacacctttggcttcctagaaccataggttgttgaccttctacacagaattcaaagagtaatgcatagcaacgtc 3825606  T
Q  167 atgtctcataggttcatgaatgttgtgttt 196  Q
    |||| |||||| | ||||||| ||||||||    
T  3825605 atgtttcatagatccatgaatattgtgttt 3825576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 55 - 155
Target Start/End: Complemental strand, 6121045 - 6120947
Alignment:
Q  55 ttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatg 154  Q
    |||| |||||||||||| ||||||| ||| ||  ||||||| ||| ||||||||||||||| |||| ||||| || ||||| |||||||||||| |||||    
T  6121045 ttctcacaatcaacatgtttttatagcatgtg--tttgacacttttggttttctagtaccaaaggtcgttgatctcctacaaagagttcaaaaggtcatg 6120948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 115 - 192
Target Start/End: Original strand, 9259377 - 9259454
Alignment:
Q  115 agaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgt 192  Q
    |||||||||||||||||||||||||||||| |   ||||||||||||||||||| | || || || ||||||||||||    
T  9259377 agaggttgttgaccttctacatagagttcacagactcatgcatagcaatgtcatatatcctaagtccatgaatgttgt 9259454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 4699973 - 4699812
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||| ||  |||||||| ||||| |||||| ||||| | |||||| | || ||| ||| || ||  ||| |||||||| |||||||||||    
T  4699973 gtggccaaacatgataag-cgtgttctcacaattaacatgtttttacaccatttg-tgttaacacttttggcttcatagcaccagaggctgttgaccttc 4699876  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    || ||| |||||||| || |||| |||||||| | ||||| | ||||| ||||||||||||||||    
T  4699875 tatataaagttcaaaggt-catgaatagcaatattatgtcacctaggtccatgaatgttgtgttt 4699812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 196
Target Start/End: Original strand, 8540384 - 8540546
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctac-- 134  Q
    ||||||| |||||| ||||||| |||||| ||||| |||||| |||| ||| ||||||| ||||   ||||||  | |||||||||||||| ||||||      
T  8540384 caaacattagaaaatgtgttctaacaatcgacatgtttttatgtcatctgcatttgacactttcaactttctaacatcagaggttgttgactttctacat 8540483  T
Q  135 -atagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
     ||| |||||||| | |||||| || ||||||||||| |  ||  ||||| ||||||||||||    
T  8540484 aataaagttcaaagggtcatgcttaacaatgtcatgttttctattttcataaatgttgtgttt 8540546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 190
Target Start/End: Complemental strand, 36004201 - 36004069
Alignment:
Q  58 tgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcat 157  Q
    |||||||||||||| ||||||| ||||| | ||||||||||| |  || |||  ||||||||||||||||| |||| | ||||||  || | ||||| ||    
T  36004201 tgacaatcaacatgtttttataccatttacatttgacatttttgacttcctatcaccagaggttgttgaccatctaaaaagagtttcaagggtcatggat 36004102  T
Q  158 agcaatgtcatgtctcataggttcatgaatgtt 190  Q
    | |||  | ||||||||||||| ||||||||||    
T  36004101 aacaacattatgtctcataggtccatgaatgtt 36004069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 42922140 - 42922192
Alignment:
Q  43 tgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgaca 95  Q
    |||||||||||||| |||||||||| ||||||||| ||||||||| |||||||    
T  42922140 tgagaaaacgtgttttgacaatcaaaatgcttttaaatcatttgcctttgaca 42922192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 195
Target Start/End: Complemental strand, 24451105 - 24451062
Alignment:
Q  152 atgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 195  Q
    |||||||||||||||||||||| ||||| |||||||||||||||    
T  24451105 atgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtt 24451062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 196
Target Start/End: Original strand, 121805 - 121887
Alignment:
Q  114 cagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||| |||||||| ||||||| | |||| ||||| ||||||||| ||||||||||||   || || |||| |||||||||||    
T  121805 cagagattgttgacattctacacaaagtttaaaagatcatgcatatcaatgtcatgtcatctaagtccatggatgttgtgttt 121887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 10556295 - 10556456
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||| ||||||||||||||| | |||||| |||||||||| |||||||| | |||  ||||||| ||  |  || |||| || ||||   |||||  |||    
T  10556295 gtggtcaaacatgagaaaacatattctgaaaatcaacatgtttttatataaattgtatttgacacttatgacttcctagcactagagacagttgatattc 10556394  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgt 194  Q
    | ||||||||||||    ||||||| | ||||||| || |||||| |||||||||||||||||    
T  10556395 tgcatagagttcaatgagtcatgcaaaacaatgtcgtggctcata-gttcatgaatgttgtgt 10556456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 146
Target Start/End: Complemental strand, 27715421 - 27715339
Alignment:
Q  64 tcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaa 146  Q
    |||||||||||||||| ||||| | ||||| |||||  | || |||||| || | ||||||||||||||| | ||||||||||    
T  27715421 tcaacatgcttttataccatttacgtttgatatttttagcttcctagtatcataagttgttgaccttctaaaaagagttcaaa 27715339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 137
Target Start/End: Original strand, 4097373 - 4097450
Alignment:
Q  60 acaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 137  Q
    |||||||||||  |||||||| |||| | ||||| ||||| |  ||||||| | |||||||||||||| |||||||||    
T  4097373 acaatcaacatatttttatatgatttacatttgaaatttttgcctttctagcatcagaggttgttgactttctacata 4097450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 147
Target Start/End: Original strand, 43421302 - 43421403
Alignment:
Q  46 gaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaa 145  Q
    |||||||||  | |||||| |||||| |||||||||||||   ||||||| ||| ||||||||| ||| | || || ||||||||||| | |||| ||||    
T  43421302 gaaaacgtgcaccgacaattaacatgtttttatatcatttttgtttgacacttttggttttctaatactaaagattattgaccttctaaaaagagctcaa 43421401  T
Q  146 aa 147  Q
    ||    
T  43421402 aa 43421403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 5329680 - 5329768
Alignment:
Q  108 tagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||| |||| ||||||||||||| ||| ||||||||| | ||||| | | |||| ||||||||| || ||  || ||||||||||||    
T  5329680 tagtactagagattgttgaccttctgcattgagttcaaagggtcatggacaacaatatcatgtctcctatgtctatcaatgttgtgttt 5329768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 10950673 - 10950729
Alignment:
Q  44 gagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttc 100  Q
    ||||||||||||||| ||||| ||||| |||||||| ||||| | ||||||| ||||    
T  10950673 gagaaaacgtgttctaacaattaacatacttttataccatttacatttgacactttc 10950729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 10958678 - 10958734
Alignment:
Q  44 gagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttc 100  Q
    ||||||||||||||| ||||| ||||| |||||||| ||||| | ||||||| ||||    
T  10958678 gagaaaacgtgttctaacaattaacatacttttataccatttacatttgacactttc 10958734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 42659212 - 42659168
Alignment:
Q  152 atgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||||| | ||||||  ||||||||||||||||||||||    
T  42659212 atgcatagcaatattatgtcttctaggttcatgaatgttgtgttt 42659168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 8e-57; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 32 - 195
Target Start/End: Complemental strand, 22347000 - 22346837
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    ||||||||| |||||||| |||||||||||||||||||||| |||||| | ||||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  22347000 gtggccaaatatgagaaagcgtgttctgacaatcaacatgcgtttataccttttgcttttgacactttcggtttcctagtagcagaggttgttgaccttc 22346901  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 195  Q
    |||| |||||||||||| |||||||||| ||||||||||||| |||||| ||||||||||||||    
T  22346900 tacacagagttcaaaaggtcatgcatagaaatgtcatgtctcctaggtttatgaatgttgtgtt 22346837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 33 - 191
Target Start/End: Complemental strand, 21473107 - 21472949
Alignment:
Q  33 tggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttct 132  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||| || | |||| |||| |||||||| ||||||||||||    
T  21473107 tggccaaacatgagaaagcgtgttctgacaatcaacatgtttttataccatttgcttttgacacttgcagtttcctagcaccagaggctgttgaccttct 21473008  T
Q  133 acatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttg 191  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||    
T  21473007 acatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttg 21472949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 32 - 173
Target Start/End: Original strand, 29169795 - 29169936
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||| ||||||||||||| ||||||    
T  29169795 gtggccaaacacgagaaaacgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcggtttcctagcaccagaggttgttaaccttc 29169894  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctc 173  Q
    ||||||||||||||||| ||||||| ||||||||||||||||    
T  29169895 tacatagagttcaaaaggtcatgcacagcaatgtcatgtctc 29169936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 28041129 - 28041290
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    ||||||||||||||||||  |||||||||||||||||| | ||||||| ||||||||||||||| ||||||||| |||| ||||||||  ||||||||||    
T  28041129 gtggccaaacatgagaaagtgtgttctgacaatcaacaggtttttataccatttgcttttgacactttcggtttcctagcaccagaggcggttgaccttc 28041228  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtg 193  Q
    ||||||||||||||||| ||||||||||||||||||||||   || || |||||||||||||    
T  28041229 tacatagagttcaaaaggtcatgcatagcaatgtcatgtcctctaagtccatgaatgttgtg 28041290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 42 - 196
Target Start/End: Original strand, 20259809 - 20259963
Alignment:
Q  42 atgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagt 141  Q
    |||||||| ||||||||||||||||||||| ||||||| |||||  | |||||| |||||||||  ||| ||||||||||||||||||||||||||||||    
T  20259809 atgagaaagcgtgttctgacaatcaacatgtttttataccatttattgttgacactttcggtttcttagcaccagaggttgttgaccttctacatagagt 20259908  T
Q  142 tcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||| |||||||||| |||||||||||||||| ||| || ||||||||||||    
T  20259909 tcaaaaggtcatgcatagtaatgtcatgtctcataagttaataaatgttgtgttt 20259963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 45659650 - 45659812
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||| |||  |||||||| |||||||||||    
T  45659650 gtggccaaacacgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcgatttcctatcaccagaggctgttgaccttc 45659749  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |  |||||||||||||| |||||||||||||||||||||||| |||||  || ||||| ||||||    
T  45659750 t--atagagttcaaaagatcatgcatagcaatgtcatgtctcctaggtcaataaatgtcgtgttt 45659812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 34644671 - 34644507
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||||| |||||| |||||||| |||||| || |||| | ||||||||||||||||||    
T  34644671 gtggccaaacatgagaaagcgtgttctgacaacctacatgcttttataccatttgtttttgacactttcggcttcctagcatcagaggttgttgaccttc 34644572  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||| |||| | | ||||||| |||||| ||||||| ||||| ||||||||||||||||    
T  34644571 tacatagagtccaaagggttatgcatatcaatgttatgtctcctaggtccatgaatgttgtgttt 34644507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 2898810 - 2898643
Alignment:
Q  32 gtggccaaacatgagaaaa----cgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgac 127  Q
    ||||||||||||||||||     ||||||||||||||||| | | ||||||| ||||||||||||| | ||||||||| |||| ||||||||||||||||    
T  2898810 gtggccaaacatgagaaagtgagcgtgttctgacaatcaata-gtttttataccatttgcttttgatactttcggtttcctagcaccagaggttgttgac 2898712  T
Q  128 cttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||||||||||||||| ||||||||| |||| |||||||||||| | |||||||||||||||||    
T  2898711 cttctacatagagttcaaaagatcatgcataacaatatcatgtctcatacgatcatgaatgttgtgttt 2898643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 31737325 - 31737480
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||| |||||| |||||||| ||||| |||||||| |  ||||| | ||||| |||    
T  31737325 gtggccaaacatgagaaaacatattctgacaatcaacatgcttttataccatttgtttttgacactttcgattttctagcattagaggctattgacattc 31737424  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaat 187  Q
    ||||||||||||||||| ||||||||| |||||| |||| || ||| | |||||||    
T  31737425 tacatagagttcaaaaggtcatgcatatcaatgttatgtttcctagatccatgaat 31737480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 2764584 - 2764420
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||  ||||| ||||||||| |||| | || |||| | ||||||||||||||||||    
T  2764584 gtggtcaaacatgagaaaacgtgttccgacaatcaacatgcttttatgccattttcttttgacactttcagcttcctagcatcagaggttgttgaccttc 2764485  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||| ||| |||| | | ||||| | |||||| ||||||| ||||| ||| ||||||||||||    
T  2764484 tacataaagtccaaagggttatgcaaatcaatgttatgtctcttaggtccataaatgttgtgttt 2764420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 59 - 195
Target Start/End: Original strand, 24177540 - 24177676
Alignment:
Q  59 gacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcata 158  Q
    ||||||||||||  ||||||| |||||| |||||||| ||||||||| |||| | |||||| |||| ||||||||||||||||||||||  |||||||||    
T  24177540 gacaatcaacatatttttataccatttgtttttgacagtttcggtttcctagcatcagaggctgtttaccttctacatagagttcaaaaagtcatgcata 24177639  T
Q  159 gcaatgtcatgtctcataggttcatgaatgttgtgtt 195  Q
    |||||||||| |||| ||||| |||||||||||||||    
T  24177640 gcaatgtcatatctcctaggtccatgaatgttgtgtt 24177676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 37 - 193
Target Start/End: Original strand, 4861996 - 4862152
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 136  Q
    ||||||||||||| ||| ||||||||| |||||| ||||||||  |||||||||||||| ||||| ||| |||  |||| | ||||||||||||||||||    
T  4861996 caaacatgagaaagcgtcttctgacaagcaacatacttttatacaatttgcttttgacactttcgatttcctaacaccaaaagttgttgaccttctacat 4862095  T
Q  137 agagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtg 193  Q
    |||||||||| | ||||||||| |||||||| ||| | ||| | |||||||||||||    
T  4862096 agagttcaaagggtcatgcataacaatgtcacgtcccttagatccatgaatgttgtg 4862152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 42 - 196
Target Start/End: Complemental strand, 38731704 - 38731550
Alignment:
Q  42 atgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagt 141  Q
    |||||||| |||||||||||||||||||| ||||||||  |||||||||||| | ||| || ||  ||| ||||||||||||| ||||||||||||||||    
T  38731704 atgagaaagcgtgttctgacaatcaacatacttttatacaatttgcttttgaaacttttggcttcttagcaccagaggttgttaaccttctacatagagt 38731605  T
Q  142 tcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||| | ||||||| |  ||||||||| ||| ||||| ||||||| ||||||||    
T  38731604 tcaaagggtcatgcacaataatgtcatgactcctaggtccatgaatattgtgttt 38731550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 19035552 - 19035465
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagagg 119  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| || |||||| |||| ||||||||    
T  19035552 gtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttacttttgacacttacggtttcctagcaccagagg 19035465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 32 - 146
Target Start/End: Original strand, 50314626 - 50314740
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||| ||||||||| ||||| |||||| |||||||||||||||||||| ||||| |||||||||||||   ||| |||  || ||| ||||||||| |||    
T  50314626 gtggtcaaacatgacaaaacttgttctcacaatcaacatgcttttataccatttacttttgacattttttatttcctaacacaagatgttgttgactttc 50314725  T
Q  132 tacatagagttcaaa 146  Q
    |||||||||||||||    
T  50314726 tacatagagttcaaa 50314740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 34 - 165
Target Start/End: Complemental strand, 42919962 - 42919832
Alignment:
Q  34 ggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttcta 133  Q
    |||||||||||||||| |||||||| |||||||||||| |||||| |||| ||||||||||| ||| | ||| | || |  |||| ||||| ||||||||    
T  42919962 ggccaaacatgagaaa-cgtgttctcacaatcaacatgtttttatgtcatctgcttttgacacttttgatttccaagcagtagagattgttaaccttcta 42919864  T
Q  134 catagagttcaaaagttcatgcatagcaatgt 165  Q
    ||||||||| ||| | ||||||| ||||||||    
T  42919863 catagagtttaaagggtcatgcagagcaatgt 42919832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 53 - 195
Target Start/End: Complemental strand, 7213335 - 7213192
Alignment:
Q  53 tgttctgacaatcaacatgctttt-atatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttc 151  Q
    |||||||| ||| |||||| |||| |||||||||  |||||||| ||||||||| |||| |  ||||  |||||| ||||| |||| |||||||||  ||    
T  7213335 tgttctgataattaacatgttttttatatcatttatttttgacactttcggtttcctagcattagagactgttgagcttctgcataaagttcaaaatgtc 7213236  T
Q  152 atgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 195  Q
    |||||||  ||||||||||||  ||||| |||||||||||||||    
T  7213235 atgcataataatgtcatgtcttctaggtccatgaatgttgtgtt 7213192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 39 - 192
Target Start/End: Original strand, 18616162 - 18616315
Alignment:
Q  39 aacatgagaaaacgtgttctgacaatcaacatgc-ttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 137  Q
    ||||||||||||||||||| || ||||||||||  ||||||| |||||| |||| ||| |||||  ||||||| ||| |||| ||||||| |||||||||    
T  18616162 aacatgagaaaacgtgttc-gataatcaacatgtgttttataccatttgtttttaacactttcgactttctagcacccgaggctgttgacattctacata 18616260  T
Q  138 gagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgt 192  Q
     | |||||| | |||||||||||||| | |||| || ||||| ||| ||| ||||    
T  18616261 taattcaaagggtcatgcatagcaatattatgtatcttaggtccataaatattgt 18616315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 66 - 196
Target Start/End: Complemental strand, 47459753 - 47459623
Alignment:
Q  66 aacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgt 165  Q
    |||||| ||||||| ||||||||||||| | ||| || || |||||| ||||||  |||||||||||||||||||| |||| |   ||||||||||||||    
T  47459753 aacatgtttttataccatttgcttttgatacttttggcttcctagtatcagaggcagttgaccttctacatagagtccaaaggaatatgcatagcaatgt 47459654  T
Q  166 catgtctcataggttcatgaatgttgtgttt 196  Q
     ||||||| || ||  || ||||||||||||    
T  47459653 tatgtctcctaagtctataaatgttgtgttt 47459623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 50161419 - 50161590
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgctttt---gacattttcggttttctagtaccagaggttgttgacc 128  Q
    |||| ||||||||||||| |||||||| ||||||||||||||||||||||||||  ||||    | | ||| || |  |||| |||| |||||| ||||     
T  50161419 gtggacaaacatgagaaagcgtgttctcacaatcaacatgcttttatatcatttttttttttatatacttttggctccctagcaccaaaggttgatgaca 50161518  T
Q  129 ttctacatagagttcaaaagttcatgcatagcaatgtcatgt-----ctcataggttcatgaatgttgtgttt 196  Q
    |||||||||||||||||| | ||||||| ||||||| |||||     | ||||||| ||||||||||||||||    
T  50161519 ttctacatagagttcaaaggatcatgcagagcaatg-catgttacgacacataggtccatgaatgttgtgttt 50161590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 52 - 179
Target Start/End: Original strand, 37932239 - 37932366
Alignment:
Q  52 gtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttc 151  Q
    ||||||||||||||||| || ||||| || |||   |||| ||| |||||| || |||| |||||||| ||||||| ||||| || ||||| |||  |||    
T  37932239 gtgttctgacaatcaacgtgtttttacattattatttttttacactttcggcttcctagcaccagaggatgttgacattctatattgagtttaaacattc 37932338  T
Q  152 atgcatagcaatgtcatgtctcataggt 179  Q
     ||||||| |||||||||||||||||||    
T  37932339 gtgcatagtaatgtcatgtctcataggt 37932366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 137
Target Start/End: Complemental strand, 16500139 - 16500034
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    ||||||||| || ||||||| |||||| ||||| ||||||| ||||||  |||||||||||||| ||| |  || |||| |  ||||| |||||||||||    
T  16500139 gtggccaaatataagaaaacatgttctaacaattaacatgcctttatactatttgcttttgacacttttgacttcctagcattagaggctgttgaccttc 16500040  T
Q  132 tacata 137  Q
    ||||||    
T  16500039 tacata 16500034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 15584974 - 15584912
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacatttt 99  Q
    |||||||  |||||||| ||||||||||||||||| || |||| ||||||| |||||||||||    
T  15584974 caaacattggaaaacgtattctgacaatcaacatgtttctataccatttgcgtttgacatttt 15584912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 36486991 - 36486917
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggtttt 106  Q
    |||| |||| |||||||| |||||| |||||||||| ||  |||||||| |||||||||||||| ||| ||||||    
T  36486991 gtggtcaaatatgagaaagcgtgttttgacaatcaatatctttttatataatttgcttttgacacttttggtttt 36486917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 173
Target Start/End: Original strand, 35387747 - 35387799
Alignment:
Q  121 tgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctc 173  Q
    |||||| ||||||||||||||||||| |  |||||||| ||||||||||||||    
T  35387747 tgttgatcttctacatagagttcaaagggacatgcatatcaatgtcatgtctc 35387799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 187
Target Start/End: Original strand, 868513 - 868560
Alignment:
Q  140 gttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaat 187  Q
    ||||||||| |||||||||||||||||||||||| || || |||||||    
T  868513 gttcaaaaggtcatgcatagcaatgtcatgtctcctaagtccatgaat 868560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 23043982 - 23043929
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcattt 85  Q
    ||||||||| ||||||||||  || || |||||||||||||||||||| |||||    
T  23043982 gtggccaaatatgagaaaacaagtactcacaatcaacatgcttttataccattt 23043929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 196
Target Start/End: Original strand, 35550100 - 35550241
Alignment:
Q  55 ttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatg 154  Q
    ||||||||||||||||  || ||||| |||| | ||||||| | | || || |||| || | ||||||||| ||||||| | |||||| ||| | |||||    
T  35550100 ttctgacaatcaacataattctatattatttacgtttgacactcttggcttcctagcactataggttgttggccttctaaaaagagtttaaaggatcatg 35550199  T
Q  155 catagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
     ||| |||||| ||||| | || ||| || ||||||||||||    
T  35550200 tataacaatgttatgtcccttatgtttattaatgttgtgttt 35550241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 33355 - 33191
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    ||||| |||||||||||| ||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||| |||  ||||||||||||||||||||    
T  33355 gtggctaaacatgagaaagcgtgttctgacaatcaacatgtttttataccatttacttttgacattttcggtttcctaacaccagaggttgttgaccttc 33256  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||||||||||| |||||||||||||| | ||||||| ||||| |||||| || ||||||    
T  33255 tacatagagttcaaaaggtcatgcatagcaattttatgtctcctaggtccatgaacgtcgtgttt 33191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 3e-50; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 959685 - 959522
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    ||||| || |||||||||||||||||||||||||||||||  |||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||    
T  959685 gtggctaaccatgagaaaacgtgttctgacaatcaacatgtctttataccatttgtttttgacattttcggtttcctagcaccagaggttgttgaccttc 959586  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||| || |||||||||| ||||||||||||||||  |||||| ||||| ||||||||||||||||    
T  959585 tacgta-agttcaaaaggtcatgcatagcaatgttgtgtctcctaggtccatgaatgttgtgttt 959522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 4206598 - 4206762
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    ||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||| || |||| ||||||||||||||||||||    
T  4206598 gtggctaaacatgagaaagcgtgttctgacaatgaacatgcttttatatcatttgcttttgacactttcgggttcctagcaccagaggttgttgaccttc 4206697  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||||||||||| ||||||||  |||||||||||| | |||||  |||||| | ||||||    
T  4206698 tacatagagttcaaaaggtcatgcatgacaatgtcatgtcacctaggtcaatgaatatagtgttt 4206762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 32 - 171
Target Start/End: Original strand, 4165924 - 4166063
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||| ||||||||||||||||||||    
T  4165924 gtggctaaacatgagaaagcgtgttctgacaatcaacatgcttttatatcatttgcttttgacactttcgggttcctagcaccagaggttgttgaccttc 4166023  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtc 171  Q
    ||||||||||| ||||| ||||||||  ||||||||||||    
T  4166024 tacatagagtttaaaaggtcatgcatgacaatgtcatgtc 4166063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 37 - 172
Target Start/End: Original strand, 45684 - 45819
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 136  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||| |||||||||  ||| |||||||| ||||||||||||||||    
T  45684 caaacatgagaaaacgtgttctgacaatcaacatgcttttattccatttgtttttgacactttcggtttcttagcaccagaggctgttgaccttctacat 45783  T
Q  137 agagttcaaaagttcatgcatagcaatgtcatgtct 172  Q
    |||||||||||| |||||||||||||||| ||||||    
T  45784 agagttcaaaaggtcatgcatagcaatgttatgtct 45819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 17249307 - 17249471
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||| ||| || || |||| | ||||||  ||||||||||    
T  17249307 gtggccaaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgcttttgacacttttggcttcctagcatcagaggcagttgaccttc 17249406  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||| |||| | | ||| |||||||||| ||||||| || |||||||||||||||||||    
T  17249407 tacatagagtccaaaggattatgtatagcaatgttatgtctcctaagttcatgaatgttgtgttt 17249471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 36 - 192
Target Start/End: Complemental strand, 34304597 - 34304441
Alignment:
Q  36 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctaca 135  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||| || || |||| | |||| | |||||||||||||||    
T  34304597 ccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttgggcttcctagcatcagatgatgttgaccttctaca 34304498  T
Q  136 tagagttcaaa-agttcatgcatagcaatgtcatgtctcataggttcatgaatgttgt 192  Q
    |||||| |||| |||| |||||||||||| |||||||||||||||  |||||||||||    
T  34304497 tagagtccaaagagtt-atgcatagcaatatcatgtctcataggtctatgaatgttgt 34304441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 33220713 - 33220877
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||||| |||||  |||||||||||||||||||||| ||||||||||||||| |||||| || |||| | | ||||||||||||||||    
T  33220713 gtggccaaacatgagaaagcgtgtgttgacaatcaacatgcttttataccatttgcttttgacactttcggcttcctagcatccgaggttgttgaccttc 33220812  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||| ||| |||| | | ||||||||||||||  |||||  ||||| ||||||||||| ||||    
T  33220813 tacatatagtccaaagggttatgcatagcaatgttgtgtcttctaggtccatgaatgttgcgttt 33220877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 35 - 196
Target Start/End: Original strand, 29338084 - 29338245
Alignment:
Q  35 gccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctac 134  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||| ||  |  || |||| ||||||| | |||||||||||||    
T  29338084 gccaaacatgagaaaacgtgttctaacaatcaacatgctcttataccatttgcttttgacacttctgacttcctagcaccagagatcgttgaccttctac 29338183  T
Q  135 atagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||  ||||||| | ||||||| | |||||||||| ||| ||||| ||||||||||||||||    
T  29338184 atatggttcaaagggtcatgcacatcaatgtcatgactcctaggtccatgaatgttgtgttt 29338245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 28626036 - 28625872
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgctttt-atatcatttgcttttgacattttcggttttctagtaccagaggttgttgacctt 130  Q
    ||||| ||||| |||||||||||||||||||||||||||  |||| ||| |||||| |||| ||| ||||  ||| |||| ||||||||||||||| |||    
T  28626036 gtggctaaacacgagaaaacgtgttctgacaatcaacattttttttataccatttgttttttacactttcaatttcctagcaccagaggttgttgagctt 28625937  T
Q  131 ctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||| |||||||||| ||||||||| | ||||||| ||||||||||  |||||||||||||||    
T  28625936 ctacataaagttcaaaaggtcatgcataac-atgtcatatctcataggtctatgaatgttgtgttt 28625872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 357719 - 357882
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| | |||| |||| ||| ||| | ||| |||  |  |||||||| ||||||||    
T  357719 gtggccaaacatgagaaagcgtgttctgacaatgaacatgcttttataacctttgtttttaacacttttg-tttcctaacattagaggttgatgaccttc 357817  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||| |||| | | | |||||||||||| || |||| ||||| ||||||||||||||||    
T  357818 tacatagagtccaaatgattaagcatagcaatgttatctctcctaggtccatgaatgttgtgttt 357882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 33 - 169
Target Start/End: Complemental strand, 34415540 - 34415404
Alignment:
Q  33 tggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttct 132  Q
    |||| ||||||||||||  |||||||||||||||||||||||||||  |||||| |||||||| ||| ||||| |||  |||| | |  |||||||||||    
T  34415540 tggcgaaacatgagaaagtgtgttctgacaatcaacatgcttttatgccatttgtttttgacactttaggtttcctaacaccaaatgcagttgaccttct 34415441  T
Q  133 acatagagttcaaaagttcatgcatagcaatgtcatg 169  Q
    | |||||||||||| | ||||||||||||||||||||    
T  34415440 atatagagttcaaatggtcatgcatagcaatgtcatg 34415404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 36 - 196
Target Start/End: Original strand, 34554283 - 34554442
Alignment:
Q  36 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctaca 135  Q
    |||||||||||||| |||||||||| |||||| ||| ||||||| ||||| |||||||||  ||||| || |||| |||||| | | ||||| |||||||    
T  34554283 ccaaacatgagaaagcgtgttctgataatcaagatgtttttataccatttacttttgacacattcggcttcctagcaccagatgctattgactttctaca 34554382  T
Q  136 tagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||| ||||| ||||| |||||||| ||||||||| || | |||||||| ||||||||    
T  34554383 tagagtttaaaaggtcatgtatagcaatatcatgtctcgtaag-tcatgaattttgtgttt 34554442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 173
Target Start/End: Complemental strand, 24016437 - 24016301
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 136  Q
    ||||||||||||| | |||||| |||||||||||| ||||||| |||||||| |||| | ||| ||||| |||| |||||| ||||||||  || |||||    
T  24016437 caaacatgagaaagcttgttctcacaatcaacatgtttttataccatttgctattgatagttttggtttcctagcaccagatgttgttgattttttacat 24016338  T
Q  137 agagttcaaaagttcatgcatagcaatgtcatgtctc 173  Q
    |||||||||| | ||||||| |  |||||||||||||    
T  24016337 agagttcaaagggtcatgcacaagaatgtcatgtctc 24016301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 38 - 197
Target Start/End: Complemental strand, 3715016 - 3714857
Alignment:
Q  38 aaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 137  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||| || |||||||| ||| |  ||  ||| |||| ||  | |||| ||||||||||    
T  3715016 aaacatgagaaaacgtgttctcacaattaacatgtttttatatcatctgtttttgacacttttgacttcttagcaccaaagactcttgatcttctacata 3714917  T
Q  138 gagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttg 197  Q
    ||||| |||   ||||||| | |||||||||||||||||  | |||||||||||||||||    
T  3714916 gagtttaaagaatcatgcacaacaatgtcatgtctcataaatccatgaatgttgtgtttg 3714857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 32115734 - 32115659
Alignment:
Q  121 tgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||||||||| |||||||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  32115734 tgttgaccttctacaaagagttcaaaaggtcatgcataacaatgtcatgtctcctaggtccatgaatgttgtgttt 32115659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 48 - 156
Target Start/End: Original strand, 26225597 - 26225705
Alignment:
Q  48 aaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaa 147  Q
    |||| |||||||||||||||||||||||| || || ||   ||||||||||| || ||||||| || ||| ||||||| ||||| ||||||||||||||     
T  26225597 aaacatgttctgacaatcaacatgcttttttaccagttatgtttgacatttttggctttctagcactagatgttgttggccttcaacatagagttcaaag 26225696  T
Q  148 gttcatgca 156  Q
    | |||||||    
T  26225697 gctcatgca 26225705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 196
Target Start/End: Original strand, 13398205 - 13398348
Alignment:
Q  53 tgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttca 152  Q
    ||||| ||||||||||||  |||||||  |||| ||||||| ||||| |  || |||  | |||| ||||||||| |||||||||||||||||||| | |    
T  13398205 tgttccgacaatcaacatatttttatactatttacttttgatatttttgacttcctaacatcagaagttgttgacattctacatagagttcaaaagatga 13398304  T
Q  153 tgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||| |||||||| | ||  ||| | ||| ||||||||||||    
T  13398305 tgcataacaatgtcacgacttctagatgcataaatgttgtgttt 13398348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 31703561 - 31703632
Alignment:
Q  122 gttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtg 193  Q
    ||||||||||||||||||||| ||| | ||||||| | |||| ||||||||||| ||||||||||| |||||    
T  31703561 gttgaccttctacatagagtttaaatgatcatgcacatcaatatcatgtctcattggttcatgaatattgtg 31703632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 3137367 - 3137413
Alignment:
Q  150 tcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  3137367 tcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttt 3137413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 34168973 - 34168913
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttg 92  Q
    |||||||||||||||||| | ||||  ||||| ||||||||||||||| ||||||||||||    
T  34168973 gtggccaaacatgagaaagcatgtttggacaagcaacatgcttttataccatttgcttttg 34168913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 185
Target Start/End: Complemental strand, 22986015 - 22985873
Alignment:
Q  43 tgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagtt 142  Q
    ||||||||| |||| || |||||||| | ||||||||  | |||  ||||||||||| || |  |||  | || |||||||| |||||||| |||||||     
T  22986015 tgagaaaacatgttatggcaatcaacgtacttttatactacttgtgtttgacatttttggctacctaacatcataggttgtttaccttctatatagagtc 22985916  T
Q  143 caaaagttcatgcatagcaatgtcatgtctcataggttcatga 185  Q
    |||||| |||| |||||| |||| || |||| |||||||||||    
T  22985915 caaaaggtcatacatagccatgttatatctcttaggttcatga 22985873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 185
Target Start/End: Original strand, 23802379 - 23802521
Alignment:
Q  43 tgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagtt 142  Q
    ||||||||| |||| || |||||||| | ||||||||  | |||  ||||||||||| || |  |||  | || |||||||| |||||||| |||||||     
T  23802379 tgagaaaacatgttatggcaatcaacgtacttttatactacttgtgtttgacatttttggctacctaacatcataggttgtttaccttctatatagagtc 23802478  T
Q  143 caaaagttcatgcatagcaatgtcatgtctcataggttcatga 185  Q
    |||||| |||| |||||| |||| || |||| |||||||||||    
T  23802479 caaaaggtcatacatagccatgttatatctcttaggttcatga 23802521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 132
Target Start/End: Complemental strand, 6225177 - 6225077
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||| |||||||||||||   |||| ||||||||||||||||| ||| |||||||  ||||||| ||| |  ||||||  |||||| | | |||||||||    
T  6225177 gtggtcaaacatgagaaattttgttgtgacaatcaacatgcttatatgtcatttgtgtttgacacttttgcctttctatcaccagatgctcttgaccttc 6225078  T
Q  132 t 132  Q
    |    
T  6225077 t 6225077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 28543480 - 28543412
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttc 100  Q
    |||||||||||||||||| |||||| ||| |||||  ||||| |||||  ||||| |||||||| ||||    
T  28543480 gtggccaaacatgagaaatcgtgttttgaaaatcactatgctcttatactatttgattttgacactttc 28543412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 103209 - 103047
Alignment:
Q  33 tggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttct 132  Q
    |||||||||| |||||| ||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||| |||| |||||||| ||||||||||||    
T  103209 tggccaaacacgagaaagcgtgt-ctgacaatcaacatgcttttataccatttgcttttgacactttcggtttcctagcaccagaggctgttgaccttct 103111  T
Q  133 acatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||| ||| ||||||| ||||||||| ||||||| |||||| ||||| ||||||||||||||||    
T  103110 acatcgagctcaaaaggtcatgcataacaatgtcgtgtctcctaggtccatgaatgttgtgttt 103047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 2e-48; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 32 - 173
Target Start/End: Complemental strand, 42921802 - 42921661
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||| |||| |||||||||||||| |||||    
T  42921802 gtggtcaaacacgagaaaacgtgttctgacaatcaacatgcttttataccatttgcttatgacactttcggtttcctagcaccagaggttgttggccttc 42921703  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctc 173  Q
    ||||||||||||| ||| ||||||||| ||||||||||||||    
T  42921702 tacatagagttcagaaggtcatgcataacaatgtcatgtctc 42921661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 32269799 - 32269963
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||| |||||||||||||  |||||||||||||||||| ||||||||| ||||||||||||| | ||||| ||| |||| || |||||||||||||||||    
T  32269799 gtggtcaaacatgagaaagtgtgttctgacaatcaacacgcttttataccatttgcttttgatactttcgatttcctagcactagaggttgttgaccttc 32269898  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    | |||  |||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  32269899 tgcatgaagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttt 32269963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 37873640 - 37873804
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||| ||| || || |||| ||||||||||||||||||||    
T  37873640 gtggccaaacatgagaaagcgtgttctgacaatcaacatgtttttataccatttgcttttgacacttttggcttcctagcaccagaggttgttgaccttc 37873739  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||||||||| | ||||||| | |||||||||| ||  |||||  |||||||||||||||    
T  37873740 tacatagagttcaaagggtcatgcagaacaatgtcatgacttctaggtctatgaatgttgtgttt 37873804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 13166912 - 13167076
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||| || |||| | |||||  |||||||||||    
T  13166912 gtggctaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcggcttcctagcatcagagactgttgaccttc 13167011  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||| |||| | | |||||||||||||  ||||||| ||||| ||||||||||| ||||    
T  13167012 tacatagagtccaaagggttatgcatagcaatggtatgtctcctaggtccatgaatgttgggttt 13167076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 15292028 - 15292191
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||  ||||| |||| ||| |||  ||||||||| || ||||||| |||| ||||    
T  15292028 gtggccaaacatgagaaaacgtgttctgacaatcaacatgtttttatacaatttgttttttacacttttagttttctagcactagaggttattgatcttc 15292127  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||| | |||||||||| ||||||||||||||||||  |||| ||||| ||||||||||||||||    
T  15292128 taca-aaagttcaaaaggtcatgcatagcaatgtcacatctcctaggtccatgaatgttgtgttt 15292191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 33692057 - 33692220
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||| |||||||||| ||||||||||||||||||| || ||||||||||||||| |||||| ||  ||| | |||||  |||||||||||    
T  33692057 gtggccaaacatgacaaaacgtgttatgacaatcaacatgcttttgtaccatttgcttttgacactttcggcttcttagcatcagagactgttgaccttc 33692156  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||| || |||| | | ||||||| |||||| |||||||||||||||||||||||| |||||    
T  33692157 tacatagtgtccaaagggt-atgcataacaatgttatgtctcataggttcatgaatgttctgttt 33692220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 35310553 - 35310389
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||| ||| ||||||||||| |||||| || || | | |||||| |||| ||||||    
T  35310553 gtggccaaacatgagaaagcatgttctgacaatcaacatgcttttataccatctgcttttgacactttcggcttcctggcatcagaggctgttaaccttc 35310454  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||| |||| | |  |||||| |||||| ||||||| ||||| ||||||||||||||||    
T  35310453 tacatagagtccaaagggttttgcatatcaatgttatgtctcctaggtccatgaatgttgtgttt 35310389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 62 - 196
Target Start/End: Original strand, 22188687 - 22188821
Alignment:
Q  62 aatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagca 161  Q
    |||||||||| |||||||  ||||| |||||||| ||||| |||| ||| |||||||| |||||||||||||||||||||||||||| ||||||||| ||    
T  22188687 aatcaacatgattttatactatttgtttttgacactttcgattttttagcaccagaggctgttgaccttctacatagagttcaaaaggtcatgcataaca 22188786  T
Q  162 atgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    || ||||||||| ||| ||||||||||||||||||    
T  22188787 atatcatgtctcctagattcatgaatgttgtgttt 22188821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 25663034 - 25663198
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||||| |||||||||| |||||||||| ||||||| ||||||||||||||| |||| | || |||| | |||| |||||||| ||||    
T  25663034 gtggccaaacatgagaaagcgtgttctgataatcaacatgtttttataccatttgcttttgacactttcagcttcctagcatcagaagttgttgatcttc 25663133  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||| |||| | | ||||||| |||||| ||||| | ||||| ||||||||||| ||||    
T  25663134 tacatagagtccaaagggttatgcatatcaatgttatgtcccctaggtccatgaatgttgagttt 25663198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 146
Target Start/End: Complemental strand, 43129639 - 43129525
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||| ||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||| |||  |||||| ||| |||||||||    
T  43129639 gtggtcaaacatgagaaaacgtgttctgacaatcaacatgtttttctaccatttgcttttgacattttcggtttcctaacaccagatgtttttgaccttc 43129540  T
Q  132 tacatagagttcaaa 146  Q
    |||| ||||||||||    
T  43129539 tacagagagttcaaa 43129525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 196
Target Start/End: Complemental strand, 38875739 - 38875580
Alignment:
Q  36 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctaca 135  Q
    ||||||||||||||  |||||||||||||||||||| |||| || |||||| |||||||| |||| | || |||| |||||||| || |||||||||||     
T  38875739 ccaaacatgagaaagtgtgttctgacaatcaacatgtttttgtaccatttgtttttgacactttcagcttcctagcaccagaggctgctgaccttctacg 38875640  T
Q  136 tagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||||||| ||||||||| ||||||| |||||| |||||  ||| |||||||||||    
T  38875639 tagagttcaaaaggtcatgcataacaatgtcttgtctcctaggtcaatg-atgttgtgttt 38875580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 34 - 173
Target Start/End: Complemental strand, 34335440 - 34335301
Alignment:
Q  34 ggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttcta 133  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||| |||||| |||||||| |||||  |||||   |||||||| |||||||||||||    
T  34335440 ggccaaacatgagaaagcgtgtcctgacaatcaacatgcttttataccatttgtttttgacactttcgactttctgacaccagaggctgttgaccttcta 34335341  T
Q  134 catagagttcaaaagttcatgcatagcaatgtcatgtctc 173  Q
    ||||||||||||  | |||||| || |||| |||||||||    
T  34335340 catagagttcaacggatcatgcgtaacaatctcatgtctc 34335301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 32 - 192
Target Start/End: Original strand, 26212585 - 26212745
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||||| ||| ||||||| ||||||||||||||||| |||||| |||| ||  |||| ||||  ||| |||||||| | || ||||||    
T  26212585 gtggccaaacatgagaaagcgtattctgacgatcaacatgcttttataccatttgttttttaccctttcagtttcttagcaccagaggctattaaccttc 26212684  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgt 192  Q
    ||||||||||||||||  ||||| || ||||| | ||||||| || || ||||||||||||    
T  26212685 tacatagagttcaaaatgtcatgtatggcaatattatgtctcctaagtccatgaatgttgt 26212745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 53 - 196
Target Start/End: Complemental strand, 430686 - 430543
Alignment:
Q  53 tgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttca 152  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||| |  ||  ||| | ||||||  |||||||||||||||||| | |||| | | |    
T  430686 tgttctgacaatcaacatgcttttataccatttgcttttgacacttttgtcttcatagcatcagaggcagttgaccttctacatagattccaaagggtta 430587  T
Q  153 tgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||| ||||| ||||||| ||||| ||||||||||||||||    
T  430586 tgcatagtaatgttatgtctcctaggtccatgaatgttgtgttt 430543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 39 - 179
Target Start/End: Complemental strand, 14423776 - 14423643
Alignment:
Q  39 aacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatag 138  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||    | |||| | |||||| ||||||||||||||||||    
T  14423776 aacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttc----tcctagcatcagaggctgttgaccttctacatag 14423681  T
Q  139 agttcaaaagttcatgcatagcaatgtcatgtctcataggt 179  Q
    ||||   ||| | || |||| |||||||||||||| |||||    
T  14423680 agtt---aaggtaattcataacaatgtcatgtctcttaggt 14423643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 32 - 192
Target Start/End: Complemental strand, 27336798 - 27336640
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||| ||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||| ||  || || |||| | ||||||  ||||||||||    
T  27336798 gtggtcaaacatgagaaatcgtgttctgacaatcaacatacttttataccatttgcttttgacacttgtggcttcctagcatcagaggcagttgaccttc 27336699  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgt 192  Q
    |||||||||   ||| | | ||| |||||||||| ||||||| || || ||||||||||||    
T  27336698 tacatagag--aaaatggttatgtatagcaatgttatgtctcctaagtccatgaatgttgt 27336640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 14723269 - 14723382
Alignment:
Q  55 ttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatg 154  Q
    |||||||||||||||||||||||||||||||| |||| ||| ||| |||||| ||| | ||||||||||||||||| ||| || |||||||||  |||||    
T  14723269 ttctgacaatcaacatgcttttatatcatttgttttttacacttttggttttttagcatcagaggttgttgaccttatacttaaagttcaaaatgtcatg 14723368  T
Q  155 catagcaatgtcat 168  Q
    |||| |||| ||||    
T  14723369 cataacaatatcat 14723382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 37 - 172
Target Start/End: Complemental strand, 8100652 - 8100517
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 136  Q
    |||||||||||||||||||| |||||||  ||||||||||||| |||||| || ||||| ||||   || ||   || |||||||||||||||||||| |    
T  8100652 caaacatgagaaaacgtgttgtgacaatttacatgcttttataccatttgtttgtgacactttcaacttccttccactagaggttgttgaccttctacgt 8100553  T
Q  137 agagttcaaaagttcatgcatagcaatgtcatgtct 172  Q
    |||||| |||  |||||||||| |||||||||||||    
T  8100552 agagtttaaagattcatgcatatcaatgtcatgtct 8100517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 35456056 - 35455963
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgacctt 130  Q
    ||||||||||||| |||||||| |||||||||||||||||||| | ||||||||||||| ||| || || |||| |||||||| ||||||||||    
T  35456056 caaacatgagaaagcgtgttctaacaatcaacatgcttttataccttttgcttttgacaattttggcttcctagcaccagaggatgttgacctt 35455963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 65 - 172
Target Start/End: Original strand, 41343473 - 41343581
Alignment:
Q  65 caacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat-agagttcaaaagttcatgcatagcaat 163  Q
    |||| |||||||||| |||||| ||| ||||| ||||||||||||| |||||||||||||| |||||||||| | |||||||| | ||||||||| ||||    
T  41343473 caacgtgcttttataccatttgttttcgacatattcggttttctagcaccagaggttgttggccttctacataatagttcaaaggatcatgcataacaat 41343572  T
Q  164 gtcatgtct 172  Q
     ||||||||    
T  41343573 atcatgtct 41343581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 2566194 - 2566261
Alignment:
Q  129 ttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||| | ||| ||||||||||||    
T  2566194 ttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctagatccatcaatgttgtgttt 2566261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 156
Target Start/End: Original strand, 43115464 - 43115583
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 136  Q
    |||| |||||||| |||||| |||||||||||||||||| ||| ||||||||||||||| ||  |  ||  ||  ||||||| ||||||||||||||| |    
T  43115464 caaatatgagaaagcgtgttttgacaatcaacatgctttcatagcatttgcttttgacacttctgacttcgtaacaccagagattgttgaccttctacgt 43115563  T
Q  137 agagttcaaaagttcatgca 156  Q
    |||||| ||| | |||||||    
T  43115564 agagtttaaatgatcatgca 43115583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 32230513 - 32230587
Alignment:
Q  36 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctag 110  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| ||| ||| || |||| ||| ||||||||||    
T  32230513 ccaaacatgagaaaatgtgttctgacaatcaacaagcttttataccatctgcgttcgacacttttggttttctag 32230587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 3114165 - 3114238
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttt 105  Q
    |||||||||||||||||| | |||||||||| |||||||| ||||||| |||||| |||||||| ||| |||||    
T  3114165 gtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggttt 3114238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 196
Target Start/End: Complemental strand, 19260396 - 19260245
Alignment:
Q  43 tgagaaaacgtgttctgacaatcaacatgcttttatatcatttgct-tttgacattttcggttttctagtaccagaggttgttgaccttctacatagagt 141  Q
    ||||||| |||||||  |||||||||||| |||||||||||||  | ||||| | |   |||||  |||||| | ||||| |||||||||||| ||||||    
T  19260396 tgagaaagcgtgttcgaacaatcaacatgtttttatatcattttgtgtttgatagt---ggtttcttagtactaaaggttattgaccttctacttagagt 19260300  T
Q  142 tcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||| | |||| |||| |||||| |||||| |||  |||||||||||| |||||    
T  19260299 tcaaagggtcatacataacaatgtaatgtcttatatattcatgaatgttatgttt 19260245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 7716261 - 7716146
Alignment:
Q  58 tgacaatcaacatgcttttatatcatttgc-ttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgca 156  Q
    ||||| |||| ||| || |||| ||||||| |||||||| ||| |||||||||| ||||||||||||||  ||| |||||| |||||||| | | |||||    
T  7716261 tgacattcaatatgtttctataccatttgcgttttgacacttttggttttctagcaccagaggttgttggtcttttacataaagttcaaaggattatgca 7716162  T
Q  157 tagcaatgtcatgtct 172  Q
    || |||| ||||||||    
T  7716161 taacaatatcatgtct 7716146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 8859016 - 8858969
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  8859016 caaacatgagaaagcgtgttctgacaatcaacatgtttttatatcatt 8858969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 14436602 - 14436542
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgaca 95  Q
    |||||||||||||| ||||||||||||   |||||||||| |||||||||||||| ||||||||    
T  14436602 gtggccaaacatgaaaaaacgtgttct---aatcaacatgtttttatatcatttgtttttgaca 14436542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 146
Target Start/End: Complemental strand, 27294528 - 27294429
Alignment:
Q  43 tgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagtt 142  Q
    |||| ||||||||| |||||||||||  |||||||||  |||||| ||  ||||||  |  ||||||| |||||||||||||||||||||||||| ||||    
T  27294528 tgaggaaacgtgttgtgacaatcaac--gcttttatactatttgcgttgcacattt--gtctttctagcaccagaggttgttgaccttctacatatagtt 27294433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 23023591 - 23023536
Alignment:
Q  141 ttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||| ||||||||| |||||||||||||| |||||  |||||||||||||||    
T  23023591 ttcaaaaggtcatgcatatcaatgtcatgtctcctaggtcgatgaatgttgtgttt 23023536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 7143805 - 7143757
Alignment:
Q  38 aaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttg 86  Q
    ||||||||||||||||||| | |||||||||||| |||||||| |||||    
T  7143805 aaacatgagaaaacgtgttttaacaatcaacatgtttttatatgatttg 7143757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 15810069 - 15809991
Alignment:
Q  115 agaggttgttgaccttctacatagagttcaaaa-gttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 195  Q
    |||||||||||||||   | ||||||||||||| | ||||| |||||||||||||||||| ||||  ||||||||| |||||    
T  15810069 agaggttgttgacct---atatagagttcaaaatggtcatgtatagcaatgtcatgtctcctaggcccatgaatgtcgtgtt 15809991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 195
Target Start/End: Complemental strand, 15833138 - 15833004
Alignment:
Q  58 tgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcat 157  Q
    |||||||||| ||  ||||||  ||||| | ||||||| ||| |  || |||| |||||| ||||||||   |||| |||||||||||| | ||||| ||    
T  15833138 tgacaatcaagatatttttattccatttacgtttgacacttttgacttcctagcaccagatgttgttga---tctatatagagttcaaatggtcatgtat 15833042  T
Q  158 agcaatgtcatgtctcataggttcatgaatgttgtgtt 195  Q
    | |||||||| ||||| ||| ||||||||||| |||||    
T  15833041 aacaatgtcacgtctcctagattcatgaatgtcgtgtt 15833004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 170
Target Start/End: Original strand, 23423960 - 23424011
Alignment:
Q  119 gttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgt 170  Q
    ||||||||||||||||||||| |||||| | |||| ||| ||||||||||||    
T  23423960 gttgttgaccttctacatagatttcaaaggatcattcattgcaatgtcatgt 23424011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 9829361 - 9829407
Alignment:
Q  39 aacatgagaaaacgtgttctgacaatcaacatgcttttatatcattt 85  Q
    ||||||| |||| ||||| |||||||||||||||||||||| |||||    
T  9829361 aacatgataaaatgtgttttgacaatcaacatgcttttataccattt 9829407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 8087547 - 8087591
Alignment:
Q  104 tttctagtaccagaggttgttgaccttctacatagagttcaaaag 148  Q
    |||||| || ||| |||||||||||||||||| ||||||||||||    
T  8087547 tttctattatcagcggttgttgaccttctacaaagagttcaaaag 8087591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 7e-48; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 36 - 196
Target Start/End: Original strand, 600698 - 600858
Alignment:
Q  36 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctaca 135  Q
    ||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||| || ||||||||| |||  ||||||||||||||||||||||||    
T  600698 ccaaacatgagaaaacgtgttctaacaattaacatgcttttataccatttgcttttgtcactttcggtttcctaacaccagaggttgttgaccttctaca 600797  T
Q  136 tagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||||||| ||||| ||| | |||||||||||| ||||| ||| |||| |||||||    
T  600798 tagagttcaaaaggtcatgtataactatgtcatgtctcctaggtccattaatgctgtgttt 600858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 35 - 195
Target Start/End: Complemental strand, 53170609 - 53170454
Alignment:
Q  35 gccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctac 134  Q
    ||||||||||||||| |||||||||||| |||||||||||       |||||||||||||| ||||||||| |||| |||||||| ||||||||||||||    
T  53170609 gccaaacatgagaaagcgtgttctgacagtcaacatgcttg------atttgcttttgacactttcggtttgctagcaccagaggctgttgaccttctac 53170516  T
Q  135 atagagttcaaaagttcatgcatagcaatgtcatgtctc--ataggttcatgaatgttgtgtt 195  Q
    |||||||||||||| ||||||||||||||||||||||||  ||||| ||||||||||||||||    
T  53170515 atagagttcaaaaggtcatgcatagcaatgtcatgtctcctatagg-tcatgaatgttgtgtt 53170454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 37 - 196
Target Start/End: Complemental strand, 25504395 - 25504236
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 136  Q
    |||||||||||||||||||||| |||||| ||||| ||||||| | ||||||||||||||||| ||||| |||| || ||||  |||||||||| || ||    
T  25504395 caaacatgagaaaacgtgttctaacaatcgacatgtttttataccgtttgcttttgacatttttggtttcctagcactagagactgttgaccttttaaat 25504296  T
Q  137 agagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||| ||||| |||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  25504295 agagtttaaaaggtcatgcatagtaatgtcatgtctcataggtccatgaatattgtgttt 25504236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 37 - 196
Target Start/End: Original strand, 56462113 - 56462272
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 136  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||| |||||| ||| |||| ||| ||||| |||| |||||||||||||||||||||||||    
T  56462113 caaacatgataaagcgtgttctgacaatcaacatgtttttataccatttgttttagacacttttggtttcctagcaccagaggttgttgaccttctacat 56462212  T
Q  137 agagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||| | ||||||||  |||||||||||||| || || ||| ||||||||||||    
T  56462213 agagttcaaaggatcatgcatgacaatgtcatgtctcctaagtccataaatgttgtgttt 56462272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 32 - 195
Target Start/End: Original strand, 34107696 - 34107861
Alignment:
Q  32 gtggccaaacatgagaaaacgtgt--tctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgacct 129  Q
    ||||||||||||||||||||||||  || || |||||||||| ||||||| |||||| |||||||| ||||| ||| |||| |||||||| |||||||||    
T  34107696 gtggccaaacatgagaaaacgtgtgttcagataatcaacatgtttttataccatttgtttttgacactttcgatttcctagcaccagaggctgttgacct 34107795  T
Q  130 tctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 195  Q
    ||||||||||||||||||  ||||||||| |||||| ||||||| ||| | |||||||||||||||    
T  34107796 tctacatagagttcaaaaagtcatgcataacaatgttatgtctcctagatccatgaatgttgtgtt 34107861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 53619691 - 53619527
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||| |  || |||| | ||||||  ||||||||||    
T  53619691 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttataccatttgtttttgacacttttgacttcctagcatcagaggcagttgaccttc 53619592  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||||  ||| | | ||||||| |||||| ||||||| ||||| ||||||||||||||||    
T  53619591 tacatagagtctaaagggttatgcataacaatgttatgtctcttaggtccatgaatgttgtgttt 53619527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 132489 - 132326
Alignment:
Q  33 tggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttct 132  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||| |||||| |||| ||| ||||||||| ||| || ||||| |||||||| ||||    
T  132489 tggcaaaacatgagaaatcgtgttctgacaatcaacatgcttttataccatttgttttttacactttcggtttcctaatatcagagattgttgacattct 132390  T
Q  133 acatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||| |||||| ||| | ||| ||||| |||||||||||||  ||||||||||| ||||||||||    
T  132389 acacagagtttaaagggtcaagcataacaatgtcatgtcttttaggttcatgattgttgtgttt 132326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 26521593 - 26521430
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||||||||| ||||||  ||| ||| ||||| |||| |||||||| |||||||||||    
T  26521593 gtggctaaacatgaaaaaacgtgttatgacaatcaacatgcttttatatcatatgctttcaacacttttggtttcctagcaccagaggctgttgaccttc 26521494  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||| |||||||| | |||||| |||||||||||||| || ||||  |||| |||||||||||    
T  26521493 tacatacagttcaaagggtcatgcgtagcaatgtcatgtatcctaggcccatg-atgttgtgttt 26521430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 38 - 195
Target Start/End: Original strand, 6865828 - 6865984
Alignment:
Q  38 aaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 137  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||  | ||  ||| || ||| |||||| ||||| ||||||    
T  6865828 aaacacgagaaaacgtgttctgactatcaacatgcttttatatcatttgcttttgacactttgagcttcatagcactagatgttgttaaccttttacata 6865927  T
Q  138 gagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 195  Q
    ||||||||| | | |||||||||||||||||||||| || | ||||||||||| ||||    
T  6865928 gagttcaaagggtaatgcatagcaatgtcatgtctccta-gatcatgaatgttctgtt 6865984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 51 - 196
Target Start/End: Original strand, 7536592 - 7536737
Alignment:
Q  51 cgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagtt 150  Q
    |||||| |||||||||||||| |||||||  ||||| |||||||| |||| |||| |||| ||||||||||||||||||||||||||||||||||| | |    
T  7536592 cgtgttttgacaatcaacatgtttttatacaatttgtttttgacaatttcagtttcctagcaccagaggttgttgaccttctacatagagttcaaatgat 7536691  T
Q  151 catgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    | ||||||||||| | ||||||| ||| | |||||||||| |||||    
T  7536692 cgtgcatagcaattttatgtctcgtagatccatgaatgttatgttt 7536737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 50000927 - 50001092
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgctttta-tatcatttgcttttgacattttcggttttctagtaccagaggttgttgacctt 130  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||| ||  |||||||||||||| ||| || ||||||| | ||||||  |||||||||    
T  50000927 gtggtcaaacatgagaaagcgtgttctgacaatcaacatgcttttaatacaatttgcttttgacacttttggctttctagcatcagaggcagttgacctt 50001026  T
Q  131 ctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||| ||| |||| | | |||||||||||||| ||||||| ||| | ||| ||||||||||||    
T  50001027 ctacatatagtccaaagggttatgcatagcaatgttatgtctcctagatccataaatgttgtgttt 50001092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 45 - 154
Target Start/End: Original strand, 50483211 - 50483320
Alignment:
Q  45 agaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttca 144  Q
    ||||| ||| ||||||||||||||||| ||||||| |||||||||| |||| ||||||||| |||| |||||||||||||||||||||||||||||||||    
T  50483211 agaaagcgtcttctgacaatcaacatgattttataccatttgctttcgacactttcggtttcctagcaccagaggttgttgaccttctacatagagttca 50483310  T
Q  145 aaagttcatg 154  Q
    |||| |||||    
T  50483311 aaaggtcatg 50483320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 56 - 196
Target Start/End: Complemental strand, 3330077 - 3329937
Alignment:
Q  56 tctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgc 155  Q
    ||||||||||||||||||||||||  |||||||||||||| ||| || || |||| | ||||||  |||||||||||||||||||| |||| | | ||||    
T  3330077 tctgacaatcaacatgcttttatactatttgcttttgacacttttggcttcctagcatcagaggcagttgaccttctacatagagtccaaagggttatgc 3329978  T
Q  156 atagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||| ||||||| ||||| |||||||| |||||||    
T  3329977 atagcaatgttatgtctcctaggtccatgaatgctgtgttt 3329937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 32 - 195
Target Start/End: Original strand, 30940741 - 30940897
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||| ||||| ||| |||| ||| |||| ||      |||    
T  30940741 gtggtcaaacatgagaaagcgtgttctgacaatcaacatgcttttatacca-ttgcttttgacactttcgatttcctagcacctgaggctg------ttc 30940833  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 195  Q
    ||||||||||||||||| ||||||||| ||||||||| | || |||||  ||||||||||||||    
T  30940834 tacatagagttcaaaaggtcatgcataacaatgtcatatatcctaggtctatgaatgttgtgtt 30940897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 107 - 196
Target Start/End: Complemental strand, 16955490 - 16955401
Alignment:
Q  107 ctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||  ||||||||||||||||    
T  16955490 ctagcaccagaggttgctgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggcccatgaatgttgtgttt 16955401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 55933464 - 55933626
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    ||||||||||||||||||   |||||| |||||||||||||||||||| ||||||||||||||| |||||  || |||| | |  |||||||||||||||    
T  55933464 gtggccaaacatgagaaagtttgttctaacaatcaacatgcttttataccatttgcttttgacactttcgacttcctagcatc--aggttgttgaccttc 55933561  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||| |||| | | || |||| |||| | ||||||| ||||| | ||||||||||||||    
T  55933562 tacatagagtccaaagggttatacataacaatattatgtctcctaggtccgtgaatgttgtgttt 55933626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 68 - 196
Target Start/End: Original strand, 38535607 - 38535735
Alignment:
Q  68 catgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtca 167  Q
    |||||| ||||| ||||||| ||||||| ||| |  || |||| ||||||||||||| ||| |||||||||||||||||   ||||||||||||||||||    
T  38535607 catgctcttataccatttgcatttgacacttttgacttcctagcaccagaggttgttcaccctctacatagagttcaaagagtcatgcatagcaatgtca 38535706  T
Q  168 tgtctcataggttcatgaatgttgtgttt 196  Q
    ||||| |||||| |||| |||||||||||    
T  38535707 tgtcttataggtccatggatgttgtgttt 38535735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 46440911 - 46441045
Alignment:
Q  52 gtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttc 151  Q
    ||||||| ||||| |||| | ||||||||||||||||||||||| |||||| || |||| | |||| | || |||||||||||||||||| |||| | |     
T  46440911 gtgttctaacaattaacacgtttttatatcatttgcttttgacactttcggcttcctagcatcagaagctgctgaccttctacatagagtccaaagggtt 46441010  T
Q  152 atgcatagcaatgtcatgtctcataggttcatgaa 186  Q
     ||||||||||||  ||||||||||||||||||||    
T  46441011 gtgcatagcaatgctatgtctcataggttcatgaa 46441045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 114 - 196
Target Start/End: Complemental strand, 4419286 - 4419204
Alignment:
Q  114 cagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    ||||||||||||||||||||||||||||||||| | | ||||||| |||||| ||||||| ||||| ||||||||||||||||    
T  4419286 cagaggttgttgaccttctacatagagttcaaagggttatgcataacaatgttatgtctcctaggtccatgaatgttgtgttt 4419204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 52 - 142
Target Start/End: Complemental strand, 11562983 - 11562893
Alignment:
Q  52 gtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagtt 142  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||  ||  ||||||||||| ||||||||| |||||    
T  11562983 gtgttcggacaatcaacatgcttttatatcatttactttagacattttcggttttctaacactcgaggttgttgatcttctacattgagtt 11562893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 169
Target Start/End: Original strand, 54190857 - 54190990
Alignment:
Q  31 tgtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgacctt 130  Q
    ||||| ||||||||||||||| | ||||||||||  ||||| ||||||     |||||||||||| ||| |  ||||||||| |||||||||||||||||    
T  54190857 tgtggtcaaacatgagaaaacatattctgacaatttacatgtttttat-----ttgcttttgacacttttgactttctagtatcagaggttgttgacctt 54190951  T
Q  131 ctacatagagttcaaaagttcatgcatagcaatgtcatg 169  Q
    | |||||||||||||| |  |||||||| ||||||||||    
T  54190952 ccacatagagttcaaagggccatgcataacaatgtcatg 54190990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 165
Target Start/End: Original strand, 43849349 - 43849483
Alignment:
Q  31 tgtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgacctt 130  Q
    |||||||||||| |||||| ||||||| || || |||||||||||||||  |||||  ||||||| ||| || || |||| |||| ||||||| || |||    
T  43849349 tgtggccaaacacgagaaagcgtgttcagataaccaacatgcttttatactatttgtgtttgacacttttggcttcctagaaccaaaggttgtggatctt 43849448  T
Q  131 ctacatagagttcaaaagttcatgcatagcaatgt 165  Q
    ||||| |||||||||| | ||||||||| ||||||    
T  43849449 ctacaaagagttcaaatggtcatgcataacaatgt 43849483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 36 - 173
Target Start/End: Original strand, 50462952 - 50463089
Alignment:
Q  36 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctaca 135  Q
    ||||||||||||||  || ||| ||||||||||||||||| ||| ||||||||||||||| ||| | ||| ||   |||||||  ||||||||||||||     
T  50462952 ccaaacatgagaaagtgtcttccgacaatcaacatgctttcataccatttgcttttgacacttttgatttccttacaccagagactgttgaccttctacg 50463051  T
Q  136 tagagttcaaaagttcatgcatagcaatgtcatgtctc 173  Q
    ||||||| ||| |  |||||||| ||||| ||||||||    
T  50463052 tagagtttaaagggccatgcataacaatgccatgtctc 50463089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 23255809 - 23255654
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| |||||| |||||||         ||  ||| | || |||  ||||||||||    
T  23255809 gtggccaaacatgagaaagcgtgttctgacaattaacatgcttttataccatttgtttttgac---------ttcttagcatcataggcagttgaccttc 23255719  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||| |||| | | ||||||| |||||| ||||||| || || ||||||| ||||||||    
T  23255718 tacatagagtccaaagggttatgcataacaatgttatgtctcctaagtccatgaatattgtgttt 23255654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 55 - 155
Target Start/End: Complemental strand, 53098503 - 53098403
Alignment:
Q  55 ttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatg 154  Q
    ||||||||||||||||| ||||  | | ||| ||||||||||||| ||||| |||| | ||||||||||| ||||||||||||||||||||| | |||||    
T  53098503 ttctgacaatcaacatgtttttgaaccgtttccttttgacatttttggtttcctagcatcagaggttgttaaccttctacatagagttcaaatggtcatg 53098404  T
Q  155 c 155  Q
    |    
T  53098403 c 53098403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 38 - 192
Target Start/End: Original strand, 46391323 - 46391474
Alignment:
Q  38 aaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 137  Q
    ||||| |||||||| |||||| |||  ||||||| ||||||| |||| |||| | ||||||||| ||| |||  |  |||||||||||||||||||||||    
T  46391323 aaacacgagaaaacatgttctcacagccaacatgtttttataccatt-gcttgtaacattttcgatttcctatcagtagaggttgttgaccttctacata 46391421  T
Q  138 gagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgt 192  Q
     |||||||||| ||||||  | |||||||||||||| ||  | ||||||||||||    
T  46391422 aagttcaaaagatcatgc--aacaatgtcatgtctcctaaatccatgaatgttgt 46391474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 196
Target Start/End: Original strand, 48656917 - 48657081
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagt-accagaggttgttgacctt----c 131  Q
    |||||||||||||  ||||| || ||||||| ||| ||||||| |||||| |||||||| |||||  ||  |||  |  ||||||||||||||||    |    
T  48656917 caaacatgagaaagtgtgttatgtcaatcaaaatgtttttataccatttgtttttgacactttcgacttcttagcgattagaggttgttgaccttccttc 48657016  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||| |||| | | |||||||||||||| |||||||||||||  |||||||||||||||    
T  48657017 tacatagagtccaaatgattatgcatagcaatgttatgtctcataggtctatgaatgttgtgttt 48657081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 73 - 159
Target Start/End: Original strand, 747812 - 747898
Alignment:
Q  73 ttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatag 159  Q
    ||||||| ||||||||||||| ||||  |||||  || || ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  747812 ttttataccatttgcttttgatatttctggtttcttaatatcagaggttgttgaccttctacatagagtttaaaaggtcatgcatag 747898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 32 - 146
Target Start/End: Complemental strand, 31847192 - 31847078
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||| ||||||||||||| | |||||||||| |||||||| |||| || ||||||||||||||| ||| || || |||| | |||| |  ||||||||||    
T  31847192 gtggtcaaacatgagaaaccatgttctgacagtcaacatgtttttttaccatttgcttttgacacttttggcttcctagcatcagaagcggttgaccttc 31847093  T
Q  132 tacatagagttcaaa 146  Q
    |||||||||| ||||    
T  31847092 tacatagagtccaaa 31847078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 141
Target Start/End: Original strand, 12918374 - 12918483
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||| ||||||| ||||| |||||||||||||||||||  ||||||||  |||| ||||||||| |||||  || |||| | ||||| ||||||||||||    
T  12918374 gtggtcaaacataagaaatcgtgttctgacaatcaacacacttttatactatttacttttgacactttcgacttcctagcatcagagattgttgaccttc 12918473  T
Q  132 tacatagagt 141  Q
    || |||||||    
T  12918474 tagatagagt 12918483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 16957643 - 16957568
Alignment:
Q  36 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagt 111  Q
    ||||||||||||||  ||| ||||| ||||||||||||| |||| ||||||||||||||| |||| ||||||||||    
T  16957643 ccaaacatgagaaagtgtgctctgataatcaacatgcttatataccatttgcttttgacactttcagttttctagt 16957568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 159
Target Start/End: Original strand, 712636 - 712722
Alignment:
Q  73 ttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatag 159  Q
    ||||||| ||||||||||||| ||||  |||||  || || |||||||||||| |||||||||||||||| ||||| ||||||||||    
T  712636 ttttataccatttgcttttgatatttctggtttcttaatatcagaggttgttgtccttctacatagagtttaaaaggtcatgcatag 712722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 196
Target Start/End: Complemental strand, 39001448 - 39001338
Alignment:
Q  86 gcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatga 185  Q
    |||||||||| ||| || || |||| | ||||||  |||||||||||||||||||| |||| | | ||||||| ||||||  |||||| ||||| |||||    
T  39001448 gcttttgacacttttggcttcctaggatcagaggcagttgaccttctacatagagtccaaaggattatgcataacaatgttgtgtctcctaggtccatga 39001349  T
Q  186 atgttgtgttt 196  Q
    |||||||||||    
T  39001348 atgttgtgttt 39001338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 115 - 192
Target Start/End: Original strand, 42455692 - 42455769
Alignment:
Q  115 agaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgt 192  Q
    |||||||||| ||||||||||||||||||||| | ||||| ||| ||||||||||| |  ||||| ||||||||||||    
T  42455692 agaggttgttaaccttctacatagagttcaaatgatcatggataacaatgtcatgttttctaggtccatgaatgttgt 42455769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 8738203 - 8738148
Alignment:
Q  139 agttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgt 194  Q
    |||||||| | |||||||||  ||||||||||||| ||||||||||||||||||||    
T  8738203 agttcaaaggctcatgcataaaaatgtcatgtctcttaggttcatgaatgttgtgt 8738148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 45386063 - 45386218
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||| ||||||| ||||| |||||||||||||||||  |  ||||||| ||||| | ||||| | ||| || ||||||| || ||||||  || ||||||    
T  45386063 gtggtcaaacataagaaagcgtgttctgacaatcaatttctttttataccatttacatttgaaacttttggctttctagcacaagaggtcattaaccttc 45386162  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaat 187  Q
    ||| || | |||||| | ||||||||| ||||||  |||||| || || |||||||    
T  45386163 tacctaaaattcaaagggtcatgcataacaatgttgtgtctcttaagtccatgaat 45386218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 28740011 - 28739846
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgc-ttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgacctt 130  Q
    ||||||||||| ||||||  ||||| ||||| | ||||||  ||||||| |||||   ||||||| |||||  || |||  |||| | ||||||||||||    
T  28740011 gtggccaaacacgagaaattgtgttgtgacagttaacatgtgttttataccatttatgtttgacactttcgacttcctaacaccacaagttgttgacctt 28739912  T
Q  131 ctacatagagttcaaaagttca-tgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
     ||||||||||||||  || || |||||| |||||| ||||||| ||||| ||| ||||||||||||    
T  28739911 ttacatagagttcaac-gtgcaatgcataacaatgttatgtctcctaggtccataaatgttgtgttt 28739846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 45760841 - 45760903
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacatttt 99  Q
    |||| |||||||| |||||| |||||||||||||  ||||||||| ||||| |||||||||||    
T  45760841 caaagatgagaaagcgtgttttgacaatcaacatatttttatatcttttgcatttgacatttt 45760903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 12053513 - 12053460
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttt 90  Q
    ||||||||||||| |||||||| |||||||| | | ||||||||||||||||||    
T  12053513 caaacatgagaaatcgtgttctaacaatcaaaacgtttttatatcatttgcttt 12053460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 24720024 - 24719976
Alignment:
Q  47 aaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgaca 95  Q
    |||||| |||||||||||||||||| ||||||||||||||  |||||||    
T  24720024 aaaacgcgttctgacaatcaacatgtttttatatcatttgtgtttgaca 24719976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 28883158 - 28883206
Alignment:
Q  37 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcattt 85  Q
    |||||||||||||||||||||  |||| ||||||| |||||||||||||    
T  28883158 caaacatgagaaaacgtgttcgaacaaccaacatgtttttatatcattt 28883206  T

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Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 173
Target Start/End: Original strand, 50464387 - 50464439
Alignment:
Q  121 tgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctc 173  Q
    |||||||||||||| ||||||| ||| | ||||||||| ||||||||||||||    
T  50464387 tgttgaccttctacgtagagtttaaagggtcatgcataacaatgtcatgtctc 50464439  T

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Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 18981659 - 18981704
Alignment:
Q  150 tcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||||    
T  18981659 tcatgcatagtaatgtcatgtctc-taggtccatgaatgttgtgttt 18981704  T

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Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 32312796 - 32312876
Alignment:
Q  115 agaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 195  Q
    |||||| ||||| ||| |||| |||||||||||| ||||||||| ||||||  |||||  ||| |  ||||||||||||||    
T  32312796 agaggtcgttgatcttatacaaagagttcaaaaggtcatgcataacaatgtagtgtcttctagatctatgaatgttgtgtt 32312876  T

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Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 34213636 - 34213561
Alignment:
Q  120 ttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    |||||||||||||| |||||||||||| | |||||| || ||||||  | |||| ||| | ||||||||||||||||    
T  34213636 ttgttgaccttctagatagagttcaaagggtcatgcctaacaatgt-gtctctcctagttccatgaatgttgtgttt 34213561  T

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Target: scaffold0470 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 7701 - 7544
Alignment:
Q  38 aaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 137  Q
    |||||||||||| |||||||| |||||||||||| ||||| | ||||||||||||||| |||| |||| ||||  |||||| ||||||||||| | ||||    
T  7701 aaacatgagaaagcgtgttctcacaatcaacatgattttaaaccatttgcttttgacactttcagtttcctagctccagagattgttgaccttttgcata 7602  T
Q  138 gagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    | ||||||||| |||||||||  ||||||||||||||||||| |||||||||| |||||    
T  7601 gcgttcaaaaggtcatgcata-taatgtcatgtctcataggtccatgaatgttatgttt 7544  T

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Target: scaffold1768 (Bit Score: 77; Significance: 6e-36; HSPs: 1)
Name: scaffold1768
Description:

Target: scaffold1768; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 186 - 350
Alignment:
Q  32 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 131  Q
    |||||||||||||||| |  | ||| |||| ||||||||||||||||| ||||||  ||||||| ||| ||||||||||||||| |||||||||||||||    
T  186 gtggccaaacatgagacagtgggttatgaccatcaacatgcttttataccatttgtgtttgacacttttggttttctagtaccaaaggttgttgaccttc 285  T
Q  132 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 196  Q
    | |||| |||||||||  |||| ||||||||||||||||||| ||| |  ||||| |||||||||    
T  286 tgcataaagttcaaaaagtcatacatagcaatgtcatgtctcctagatcgatgaacgttgtgttt 350  T

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Target: scaffold0186 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 33 - 169
Target Start/End: Complemental strand, 10468 - 10329
Alignment:
Q  33 tggccaaacatgagaaaacgtgttctgacaatcaa----catgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgacc 128  Q
    ||||||||||||| ||  |||||||||||||||||    |||||||||||| ||||||||||||||| ||  || || |||| |||||||||||||||||    
T  10468 tggccaaacatgataatgcgtgttctgacaatcaatcaacatgcttttataccatttgcttttgacacttgtggcttcctagcaccagaggttgttgacc 10369  T
Q  129 ttctacatagagttcaaaagttcatgcatagcaatgtcatg 169  Q
    ||||| |||||||| ||| |  |||||||| ||||||||||    
T  10368 ttcta-atagagttgaaagggccatgcataacaatgtcatg 10329  T

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Target: scaffold0224 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 34 - 165
Target Start/End: Original strand, 18369 - 18499
Alignment:
Q  34 ggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttcta 133  Q
    |||||||||||||||| |||||||| |||||||||||| |||||| |||| ||||||||||| ||| | ||| | || |  |||| ||||| ||||||||    
T  18369 ggccaaacatgagaaa-cgtgttctcacaatcaacatgtttttatgtcatctgcttttgacacttttgatttccaagcagtagagattgttaaccttcta 18467  T
Q  134 catagagttcaaaagttcatgcatagcaatgt 165  Q
    ||||||||| ||| | ||||||| ||||||||    
T  18468 catagagtttaaagggtcatgcagagcaatgt 18499  T

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Target: scaffold0031 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 43 - 189
Target Start/End: Complemental strand, 49505 - 49363
Alignment:
Q  43 tgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagtt 142  Q
    ||||||| |||||||||||||||||| |||||||||| ||||||||||||||| |||||  ||  ||  |||| ||||||  |    || ||||||||||    
T  49505 tgagaaatcgtgttctgacaatcaacgtgcttttataccatttgcttttgacactttcgacttcttaacaccaaaggttgagg----tcaacatagagtt 49410  T
Q  143 caaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgt 189  Q
    |||| | ||||||||| |||||||||||||| || || |||||||||    
T  49409 caaaggatcatgcataacaatgtcatgtctcttatgtccatgaatgt 49363  T

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Target: scaffold0493 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0493
Description:

Target: scaffold0493; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 8525 - 8632
Alignment:
Q  39 aacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatag 138  Q
    ||||||||||||| ||||||||||||||||||| ||||||| ||||||| ||| ||| ||| ||||| |||| || |||||||||  | ||||| || ||    
T  8525 aacatgagaaaacatgttctgacaatcaacatgtttttataccatttgcgtttaacacttttggtttcctagcactagaggttgtgaatcttctgcaaag 8624  T
Q  139 agttcaaa 146  Q
    ||||||||    
T  8625 agttcaaa 8632  T

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Target: scaffold0110 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 47542 - 47610
Alignment:
Q  33 tggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcg 101  Q
    |||||||||||||||||| ||||||||||| | |||||  ||||||| ||||||||||| ||| |||||    
T  47542 tggccaaacatgagaaaatgtgttctgacagttaacatatttttataccatttgcttttaacactttcg 47610  T

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Target: scaffold0119 (Bit Score: 35; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 16238 - 16192
Alignment:
Q  33 tggccaaacatgagaaaacgtgttctgacaatcaacatgcttttata 79  Q
    ||||||||||||||||||| |||||||||||| |||||| |||||||    
T  16238 tggccaaacatgagaaaacatgttctgacaataaacatgtttttata 16192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 170
Target Start/End: Complemental strand, 16154 - 16073
Alignment:
Q  88 ttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgt 170  Q
    |||| ||| ||| ||||| |||| |||| ||||| ||||| |||||||||||||||||| | |||||||||| ||| ||||||    
T  16154 tttttacacttttggtttcctagcacca-aggttattgactttctacatagagttcaaagggtcatgcatagtaatatcatgt 16073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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