View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8060_high_3 (Length: 378)
Name: NF8060_high_3
Description: NF8060
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8060_high_3 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 328; Significance: 0; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 13 - 360
Target Start/End: Complemental strand, 9336219 - 9335872
Alignment:
| Q |
13 |
aatattcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacc |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9336219 |
aatattcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacc |
9336120 |
T |
|
| Q |
113 |
tcaacagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactt |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
9336119 |
tcaacagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttctgcttgatgtccactt |
9336020 |
T |
|
| Q |
213 |
tattcttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaa |
312 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
9336019 |
tattcttcttttttaactcttccacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcaaa |
9335920 |
T |
|
| Q |
313 |
tagatcacccttaattgtgaggatagacacatcaaaagtaccgccacc |
360 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9335919 |
tagatcacccttaattgtgaggatagacacatcaaaagtaccgccacc |
9335872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 360
Target Start/End: Original strand, 30775099 - 30775439
Alignment:
| Q |
20 |
atacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaacag |
119 |
Q |
| |
|
||||||||||| |||| |||||| || | ||||||||| ||| ||||||||||||||||||||||||| || | ||||||| ||||| ||||||| |
|
|
| T |
30775099 |
atacactcattaaaaaggtccatattgatttcctcaaacttgacacgagtgattgatgaagaaaagtcaatgtcttgaaataaattatctatctcaacaa |
30775198 |
T |
|
| Q |
120 |
tggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattctt |
219 |
Q |
| |
|
|| | ||| || || ||| ||||||||||| | ||||| |||||||||||| || || | | |||| |||| | |||||||| || ||||| |
|
|
| T |
30775199 |
atgtgagaaacttgaaggagagtgtcctttttgccttttcacatgcagttctcaactgtctcaaagctcttggattcccggtaatgtccacgttgttctt |
30775298 |
T |
|
| Q |
220 |
cttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatca |
319 |
Q |
| |
|
| | || || || || ||||| || || | ||||||||||||||||||||| || || | ||| |||||||| || || ||||| ||||| || | |||| |
|
|
| T |
30775299 |
cgtcttaaattcctctacaaagtaattcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagcagttgctttaacttcaaacacatca |
30775398 |
T |
|
| Q |
320 |
cccttaattgtgaggatagacacatcaaaagtaccgccacc |
360 |
Q |
| |
|
| |||| ||||| | ||||||||||||||| || ||||| |
|
|
| T |
30775399 |
tctctaatggtgagaagagacacatcaaaagtcccaccacc |
30775439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 360
Target Start/End: Original strand, 35132299 - 35132635
Alignment:
| Q |
15 |
tattcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctc |
114 |
Q |
| |
|
|||||||||||||||| |||| ||| || | ||||||||| ||||| ||| |||||||||||||||| || || || |||||||| |||||| || |
|
|
| T |
35132299 |
tattcatacactcattaaaaaggtctgcattcatttcctcaaacttggcgcgattgattgatgaagaaaaatcaatgccttgaaataaagaatctacttc |
35132398 |
T |
|
| Q |
115 |
aacagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccacttta |
214 |
Q |
| |
|
|| | ||| ||||| | ||||| ||| || |||||||||| |||||||||||||| || ||||| |||| ||| ||||| ||||| |
|
|
| T |
35132399 |
aatattggcaacaacaaggaaagaaagtgatctctttgccctctagcaggcagttctcaa---------ggcttttgaattcccactaatgtctactttg |
35132489 |
T |
|
| Q |
215 |
ttcttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaata |
314 |
Q |
| |
|
||||| | || ||||||| ||||| ||||| ||||||||||||||||||||||| || || || || |||||||| || ||||| || |||| ||| | |
|
|
| T |
35132490 |
ttctttctcttgaactcttgtacaaagtagttcaccattctgttatcaaagtcctctccaccgagatgagtgtttccggcagtggccttaacttggaaga |
35132589 |
T |
|
| Q |
315 |
gatcacccttaattgtgaggatagacacatcaaaagtaccgccacc |
360 |
Q |
| |
|
|| | ||||||| || || || || ||||||||||| || ||||| |
|
|
| T |
35132590 |
cattatccttaatagtaagtattgaaacatcaaaagtgccaccacc |
35132635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 279; Significance: 1e-156; HSPs: 28)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 14 - 360
Target Start/End: Original strand, 8667260 - 8667606
Alignment:
| Q |
14 |
atattcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacct |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
8667260 |
atattcatacactcattgaaaaagtccatgttaagttcctcaaatttagcacgagtaattgatgaacaaaagtcgattcccgtaaataaagcatctacct |
8667359 |
T |
|
| Q |
114 |
caacagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccacttt |
213 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
8667360 |
caacagtggtaacaaaagcaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttctgactgatgtccacttt |
8667459 |
T |
|
| Q |
214 |
attcttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaat |
313 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||||||| ||||||||||| |||||||| ||||| || |
|
|
| T |
8667460 |
attcttcttttttaactcctcaacaaaatagttcaccattctgttatcgaagtcctcgcccccaaggtgagtgtttcctgcagtggctttcacttcaaag |
8667559 |
T |
|
| Q |
314 |
agatcacccttaattgtgaggatagacacatcaaaagtaccgccacc |
360 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
8667560 |
acatcacccttaattgtgaggatagacacatcaaaagtcccgccacc |
8667606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 13 - 360
Target Start/End: Complemental strand, 10494702 - 10494355
Alignment:
| Q |
13 |
aatattcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacc |
112 |
Q |
| |
|
||||||||||||||| |||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
10494702 |
aatattcatacactcgatgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacc |
10494603 |
T |
|
| Q |
113 |
tcaacagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactt |
212 |
Q |
| |
|
||||| ||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| | |
|
|
| T |
10494602 |
tcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgt |
10494503 |
T |
|
| Q |
213 |
tattcttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaa |
312 |
Q |
| |
|
||||||||||||| ||||| ||||||||||| || |||||||||||||| |||||||| || |||||||| ||||| ||||| |||||||||||||| || |
|
|
| T |
10494502 |
tattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcagtggcttttacttcaaa |
10494403 |
T |
|
| Q |
313 |
tagatcacccttaattgtgaggatagacacatcaaaagtaccgccacc |
360 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
10494402 |
gacatcacccttaattgtgaggatagacacatcaaaagtaccaccacc |
10494355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 13 - 360
Target Start/End: Complemental strand, 13333784 - 13333437
Alignment:
| Q |
13 |
aatattcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacc |
112 |
Q |
| |
|
||||||||||||||| |||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13333784 |
aatattcatacactcgatgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctact |
13333685 |
T |
|
| Q |
113 |
tcaacagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactt |
212 |
Q |
| |
|
||||||||||| ||||||| ||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| || || | |
|
|
| T |
13333684 |
tcaacagtggtgacaaaagaaaaggagagtatccttttttccctctcacaggcagttctcaacctccttaaggattttgggttcccactgatatcgacgt |
13333585 |
T |
|
| Q |
213 |
tattcttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaa |
312 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||| |||||||||||||| ||||| || || |||||||| |||||||||||||||||||||||||| || |
|
|
| T |
13333584 |
tattcttctttttgaactcctcaacaaaatagttcaccattctgttatcgaagtcttctcccccaaggtgagtgtttcctgcggtggcttttacttcaaa |
13333485 |
T |
|
| Q |
313 |
tagatcacccttaattgtgaggatagacacatcaaaagtaccgccacc |
360 |
Q |
| |
|
| ||||||| ||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
13333484 |
gacatcacccataattgtaaggatagacacatcaaaagtaccaccacc |
13333437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 13 - 360
Target Start/End: Original strand, 8654290 - 8654637
Alignment:
| Q |
13 |
aatattcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacc |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8654290 |
aatattgatacactcattgaaaaagtccatattaatttcctcaaatttagcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacc |
8654389 |
T |
|
| Q |
113 |
tcaacagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactt |
212 |
Q |
| |
|
||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || || ||||||| |
|
|
| T |
8654390 |
tcaacagtggtgacaaaagtaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttaccgctaatttccactt |
8654489 |
T |
|
| Q |
213 |
tattcttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaa |
312 |
Q |
| |
|
||||||||||||| ||||| || ||||| |||| |||||||||||||||||||| || || || |||||||||||||| || ||||||||||| || || |
|
|
| T |
8654490 |
tattcttctttttgaactcctctacaaagtagtacaccattctgttatcaaagtcttctccccctaggtgcgtgtttccagcagtggcttttacgtcaaa |
8654589 |
T |
|
| Q |
313 |
tagatcacccttaattgtgaggatagacacatcaaaagtaccgccacc |
360 |
Q |
| |
|
| |||||||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
8654590 |
gacatcacccttaattgtgagtatagacacatcaaaagtaccaccacc |
8654637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 17 - 360
Target Start/End: Original strand, 8659207 - 8659550
Alignment:
| Q |
17 |
ttcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaa |
116 |
Q |
| |
|
|||||||||||||| |||| ||||| || | ||||||||| |||||||||||||| ||||| | ||||| |||||| |||||||| ||| ||||||| |
|
|
| T |
8659207 |
ttcatacactcattaaaaagatccatattcatttcctcaaacctggcacgagtgattaatgaacagaagtctattccctgaaataaagaatcgacctcaa |
8659306 |
T |
|
| Q |
117 |
cagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttatt |
216 |
Q |
| |
|
||||||| |||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||| |
|
|
| T |
8659307 |
cagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacaggcagttctcaacctccttaaggattttgggttaccactaatgtccactttatt |
8659406 |
T |
|
| Q |
217 |
cttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaataga |
316 |
Q |
| |
|
||||||||| ||||| || ||||| ||||| ||||||||| ||||||||||||| ||||||||||| |||||||| | |||||||||||||| || | | |
|
|
| T |
8659407 |
cttctttttgaactcctctacaaagtagttcaccattctgctatcaaagtcctctcctccaaggtgagtgtttccagaagtggcttttacttcaaagaca |
8659506 |
T |
|
| Q |
317 |
tcacccttaattgtgaggatagacacatcaaaagtaccgccacc |
360 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
8659507 |
tcacccttcattgtaaggatagacacatcaaaagtaccaccacc |
8659550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 21 - 354
Target Start/End: Original strand, 1301308 - 1301641
Alignment:
| Q |
21 |
tacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaacagt |
120 |
Q |
| |
|
|||||||||| |||| ||||| |||| ||||||||| ||||||||||||||| ||||| | |||||||||||| |||||||| ||| |||||||| || |
|
|
| T |
1301308 |
tacactcattaaaaagatccatattaatttcctcaaacttggcacgagtgattaatgaacagaagtcgattccctgaaataaagaatcgacctcaacggt |
1301407 |
T |
|
| Q |
121 |
ggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttc |
220 |
Q |
| |
|
||| || ||||||||||| ||| ||||||||||||||||||| ||| |||||||||||||||||||||| |||| | ||| |||||||||||||||||| |
|
|
| T |
1301408 |
ggtgactaaagcaaaagagagtgtcctttttgccctctcacacgcaattctcaacctccttaaggatttctggttaccactaatgtccactttattcttc |
1301507 |
T |
|
| Q |
221 |
ttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatcac |
320 |
Q |
| |
|
||| | ||||| || ||||| ||| | |||||||| |||||||||||||| ||||||||||| || ||||| | |||||||||||||| || | ||| | |
|
|
| T |
1301508 |
tttctgaactcctctacaaagtagctcaccattctattatcaaagtcctctcctccaaggtgagtatttccaccagtggcttttacttcaaagacatcgc |
1301607 |
T |
|
| Q |
321 |
ccttaattgtgaggatagacacatcaaaagtacc |
354 |
Q |
| |
|
|||| || || ||||||||||||||||||||||| |
|
|
| T |
1301608 |
ccttgatggtaaggatagacacatcaaaagtacc |
1301641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 23 - 360
Target Start/End: Original strand, 17260091 - 17260428
Alignment:
| Q |
23 |
cactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaacagtgg |
122 |
Q |
| |
|
||||||| |||| |||||| || | ||| ||||| ||||||||||||||||| |||||||| | | ||| |||||||||| |||||||||||| ||| |
|
|
| T |
17260091 |
cactcataaaaaaggtccatattgatttcttcaaacttggcacgagtgattgacgaagaaaaattaacacccttaaataaagcgtctacctcaacattgg |
17260190 |
T |
|
| Q |
123 |
taacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttctt |
222 |
Q |
| |
|
| ||| | |||||||| ||| |||||||||| | ||||| |||||||||||||||||||||| ||||||||||| | | ||||||| ||| ||| | | |
|
|
| T |
17260191 |
tcacagaggcaaaagaaagtgtcctttttgctttttcacatgcagttctcaacctccttaaggcttttgggttcccaataatgtccaattttttcgttct |
17260290 |
T |
|
| Q |
223 |
ttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatcaccc |
322 |
Q |
| |
|
||| | ||| || |||||||||| |||||||| |||||||||||||| || ||||| || |||| ||| ||||||| || |||||||| | | | || |
|
|
| T |
17260291 |
tttgatctcctctacaaaatagtacaccattctattatcaaagtcctcacccccaagatgagtgtctccaccggtggccttaacttcgaagaccttatcc |
17260390 |
T |
|
| Q |
323 |
ttaattgtgaggatagacacatcaaaagtaccgccacc |
360 |
Q |
| |
|
|||||||| | || ||||||||||||||| || ||||| |
|
|
| T |
17260391 |
ttaattgtaacgagagacacatcaaaagtccccccacc |
17260428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 23 - 360
Target Start/End: Original strand, 17267789 - 17268126
Alignment:
| Q |
23 |
cactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaacagtgg |
122 |
Q |
| |
|
||||||| |||| |||||| || | ||||||||| ||||||||||||||||| |||||||| || | ||| |||||||||| |||||||||||| ||| |
|
|
| T |
17267789 |
cactcatcaaaaaggtccatattgatttcctcaaacttggcacgagtgattgacgaagaaaaatcaacacccttaaataaagcgtctacctcaacattgg |
17267888 |
T |
|
| Q |
123 |
taacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttctt |
222 |
Q |
| |
|
| ||| | || ||||| ||| |||||||||| | ||||| ||||||||||||||||| | || ||||||||||| | || | || ||| || ||| | |
|
|
| T |
17267889 |
tcacagaggcgaaagaaagtgtcctttttgctttttcacatgcagttctcaacctcctcatggcttttgggttcccaacaattttcaatttttttttcct |
17267988 |
T |
|
| Q |
223 |
ttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatcaccc |
322 |
Q |
| |
|
||| | || ||||||||||||| |||||||| |||||||||||||| || ||||| || |||| ||| ||||||| || |||||||| | | | || |
|
|
| T |
17267989 |
tttgatttcctcaacaaaatagtataccattctattatcaaagtcctcacccccaagatgagtgtctccaccggtggccttaacttcgaagaccttatcc |
17268088 |
T |
|
| Q |
323 |
ttaattgtgaggatagacacatcaaaagtaccgccacc |
360 |
Q |
| |
|
|||||||| | || ||||||||||||||| || ||||| |
|
|
| T |
17268089 |
ttaattgtaacgagagacacatcaaaagtcccaccacc |
17268126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 360
Target Start/End: Complemental strand, 27831197 - 27830856
Alignment:
| Q |
19 |
catacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaaca |
118 |
Q |
| |
|
|||||| |||||||||| |||||| || | ||||||||| || ||||||||||| |||| | ||||| || ||| |||||| ||||||| ||||| | |
|
|
| T |
27831197 |
catacattcattgaaaaggtccatattgatttcctcaaactttgcacgagtgatcattgaaaagaagtcaatgccctcaaataaggcatctatctcaata |
27831098 |
T |
|
| Q |
119 |
gtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattct |
218 |
Q |
| |
|
|| || ||| || |||||| ||| ||||||||||| ||||||| ||||||| |||||| |||| | ||||||||| ||| ||||||||| | |||| |
|
|
| T |
27831097 |
gtagtgtcaacagaaaaagagagtgtcctttttgccttctcacattaggttctcagcctcctcaaggctcttgggttcccactaatgtccactcttttct |
27830998 |
T |
|
| Q |
219 |
tcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatc |
318 |
Q |
| |
|
|||| || ||| | || ||||||||||| ||||| || |||||||||||||| || |||||||| |||||||| || || || || |||| ||| | | |
|
|
| T |
27830997 |
tcttcttgaacacctccacaaaatagttcaccatcctattatcaaagtcctctccaccaaggtgagtgtttccagcagttgccttaacttggaagacctt |
27830898 |
T |
|
| Q |
319 |
acccttaattgtgaggatagacacatcaaaagtaccgccacc |
360 |
Q |
| |
|
| |||||||||| | | ||||||||||||||| || ||||| |
|
|
| T |
27830897 |
atccttaattgtaacaagagacacatcaaaagtcccaccacc |
27830856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 53 - 360
Target Start/End: Original strand, 8646757 - 8647064
Alignment:
| Q |
53 |
tcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaacagtggtaacaaaagcaaaagacagtatcctttttg |
152 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| || || ||||||||| ||||| |||| ||||| | |||||||||| ||| ||||||||| |
|
|
| T |
8646757 |
tcaaatttggcacgagtgattgatgaaataaagtcaatgccattaaataaagaatctaattcaatggtggtgcaagaagcaaaagatagtgtcctttttg |
8646856 |
T |
|
| Q |
153 |
ccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaactcttcaacaaaatagttaaccat |
252 |
Q |
| |
|
| ||||| || || ||||||||||||||||||| | ||| ||| | | | |||||||| || |||||||| || || |||| |||| | || ||||| |
|
|
| T |
8646857 |
ctctctcgcatgccgttctcaacctccttaaggctcttgagtttccagtaatgtccaccttgttcttcttgttaaattcttgtgcaaagtggtccaccat |
8646956 |
T |
|
| Q |
253 |
tctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatcacccttaattgtgaggatagacacatcaaaagta |
352 |
Q |
| |
|
||| ||||||||||||| ||||| ||||| |||||||| ||||||||||| || | || | | | |||||||||| |||| ||||||||||||||| |
|
|
| T |
8646957 |
tctactatcaaagtcctctcctccgaggtgagtgtttccagcggtggctttaacatgaaagaccttatccttaattgtaaggagagacacatcaaaagtt |
8647056 |
T |
|
| Q |
353 |
ccgccacc |
360 |
Q |
| |
|
|| ||||| |
|
|
| T |
8647057 |
ccaccacc |
8647064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 22 - 360
Target Start/End: Original strand, 3147113 - 3147451
Alignment:
| Q |
22 |
acactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaacagtg |
121 |
Q |
| |
|
||||||| |||||| ||||| || | ||||||||| ||||||||||||||||||||| | ||||| | |||| |||||||| ||||| ||||| ||| |
|
|
| T |
3147113 |
acactcagtgaaaagatccatattgatttcctcaaacttggcacgagtgattgatgaaaataagtcaaatccctgaaataaagaatctatctcaatggtg |
3147212 |
T |
|
| Q |
122 |
gtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttct |
221 |
Q |
| |
|
|| | | ||||||||| ||||| | |||||| || ||||| || ||| ||||||||||||||| | ||| |||| ||| ||||| || || ||||||| |
|
|
| T |
3147213 |
gtgatgacagcaaaagatagtattcgttttgctctttcacacgccgttttcaacctccttaaggctcttgagttctcactaatgtctaccttgttcttct |
3147312 |
T |
|
| Q |
222 |
tttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatcacc |
321 |
Q |
| |
|
| || ||||| |||| ||||| ||||| || |||||||||||||| || |||||||| |||||||||||| |||| || |||| || | | | | |
|
|
| T |
3147313 |
tcttaaactcccgtgcaaagtagttcaccatcctattatcaaagtcctctcccccaaggtgggtgtttcctgcgatggccttaacttgaaagaccttatc |
3147412 |
T |
|
| Q |
322 |
cttaattgtgaggatagacacatcaaaagtaccgccacc |
360 |
Q |
| |
|
||||||||| || | ||||||||||||||| || ||||| |
|
|
| T |
3147413 |
cttaattgtaagaagagacacatcaaaagtcccaccacc |
3147451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 17 - 300
Target Start/End: Original strand, 6789356 - 6789639
Alignment:
| Q |
17 |
ttcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaa |
116 |
Q |
| |
|
|||||||||||||| |||| ||||| || | ||||||||| ||||| ||||| | ||||||| |||||||| ||| |||||||| |||||||||| |
|
|
| T |
6789356 |
ttcatacactcattaaaaatatccatattgatttcctcaaacttggcccgagtaagtgatgaaatgaagtcgatgccctgaaataaagagtctacctcaa |
6789455 |
T |
|
| Q |
117 |
cagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttatt |
216 |
Q |
| |
|
||| || || | | ||||||| |||| |||||| ||||| ||||| |||||||||||||| ||||||| ||| ||| | | | || |||||||| || |
|
|
| T |
6789456 |
tagtagtgacgacaacaaaagagagtacccttttggccctttcacacgcagttctcaaccttcttaaggcccttgagtttccagtaatatccactttgtt |
6789555 |
T |
|
| Q |
217 |
cttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggc |
300 |
Q |
| |
|
|||| | || ||||| || |||| ||||| |||| || ||||||||||||||| ||||| ||||| |||||||| ||||||| |
|
|
| T |
6789556 |
cttcctcttaaactcctctgcaaagtagtttaccaatcggttatcaaagtcctctcctccgaggtgagtgtttccaccggtggc |
6789639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 360
Target Start/End: Complemental strand, 8586032 - 8585687
Alignment:
| Q |
15 |
tattcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctc |
114 |
Q |
| |
|
|||| ||||||||||| |||| |||||| || | ||||||||| ||| |||| |||||||||||||| || |||| ||| | ||||| ||| | || |
|
|
| T |
8586032 |
tatttatacactcattaaaaaggtccatattgatttcctcaaacttgacacgcgtgattgatgaagagaaatcgacgccctcacataaataatcaatttc |
8585933 |
T |
|
| Q |
115 |
aacagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccacttta |
214 |
Q |
| |
|
|| ||| || || || ||||| ||| ||||||||||| | ||||| || ||||| |||| ||| || | | |||||||| | | || ||||| || |
|
|
| T |
8585932 |
aatagtagtgaccaatttgaaagaaagtgtcctttttgccttttcacatgccgttcttaaccgcctcaaagctcttgggttcttagtaatatccacattg |
8585833 |
T |
|
| Q |
215 |
ttcttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaata |
314 |
Q |
| |
|
||||| | || || || |||||||| ||||| | ||||||||||||||||||| | || |||||||| || ||||| ||||| ||||| ||||| || | |
|
|
| T |
8585832 |
ttctttctcttaaattcctcaacaaagtagttcaacattctgttatcaaagtcccctcccccaaggtgagtatttccagcggttgctttaacttcaaaga |
8585733 |
T |
|
| Q |
315 |
gatcacccttaattgtgaggatagacacatcaaaagtaccgccacc |
360 |
Q |
| |
|
|||||| ||||||||||||| ||||||||||||||| || ||||| |
|
|
| T |
8585732 |
catcacctttaattgtgaggagagacacatcaaaagtcccaccacc |
8585687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 250 - 360
Target Start/End: Original strand, 8628609 - 8628719
Alignment:
| Q |
250 |
cattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatcacccttaattgtgaggatagacacatcaaaa |
349 |
Q |
| |
|
||||||||||||||||||||| || |||||||| || ||||| || |||||||| ||||| || | |||||| ||||||||||||| ||||||||||||| |
|
|
| T |
8628609 |
cattctgttatcaaagtcctctccaccaaggtgagtatttccagcagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaa |
8628708 |
T |
|
| Q |
350 |
gtaccgccacc |
360 |
Q |
| |
|
|| || ||||| |
|
|
| T |
8628709 |
gtcccaccacc |
8628719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 144 - 267
Target Start/End: Original strand, 8545604 - 8545727
Alignment:
| Q |
144 |
tcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaactcttcaacaaaata |
243 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||| |||| || |||||||||||| || ||| | || |||||| | || ||||| | ||||| || |
|
|
| T |
8545604 |
tcctttttgccttctcacaggcagttctcaacctcctcaaggcttctgggttccgactaatatcctcattgttcttcctcttgaactccttcacaaagta |
8545703 |
T |
|
| Q |
244 |
gttaaccattctgttatcaaagtc |
267 |
Q |
| |
|
|| |||||||||||||||||||| |
|
|
| T |
8545704 |
attcaccattctgttatcaaagtc |
8545727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 360
Target Start/End: Complemental strand, 8636436 - 8636324
Alignment:
| Q |
248 |
accattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatcacccttaattgtgaggatagacacatcaa |
347 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |||| ||| || |||||||| ||||| || | ||||| |||||| |||| |||||||| || | |
|
|
| T |
8636436 |
accattctgttatcaaagtcctctcctccaaggtgtgtgtctccggcagtggctttaacttcaaagacttcacctttaattttgagtatagacacgtcga |
8636337 |
T |
|
| Q |
348 |
aagtaccgccacc |
360 |
Q |
| |
|
| ||||| ||||| |
|
|
| T |
8636336 |
atgtaccaccacc |
8636324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 144 - 360
Target Start/End: Complemental strand, 29582038 - 29581822
Alignment:
| Q |
144 |
tcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaactcttcaacaaaata |
243 |
Q |
| |
|
|||| |||||||||||||| || ||||||| | ||||||| | ||||||||||| ||| ||||||| || |||||| | || ||||| | |||| || |
|
|
| T |
29582038 |
tcctctttgccctctcacaagctgttctcagcttccttaaagcttttgggttcccactaatgtccaaattgttcttcctcttcaactcattcgcaaagta |
29581939 |
T |
|
| Q |
244 |
gttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatcacccttaattgtgaggatagacaca |
343 |
Q |
| |
|
|| ||||||| ||||||||||||||| ||||| ||||| || | || || ||||| || ||||| || |||| |||| | |||||| | ||||||| |
|
|
| T |
29581938 |
attcaccattcggttatcaaagtcctctcctcctaggtgagtatcgccagcagtggccttcacttcaaacttatcatccttgagtgtgagaagagacaca |
29581839 |
T |
|
| Q |
344 |
tcaaaagtaccgccacc |
360 |
Q |
| |
|
|||||||| || ||||| |
|
|
| T |
29581838 |
tcaaaagtgccaccacc |
29581822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 351
Target Start/End: Original strand, 8576297 - 8576504
Alignment:
| Q |
144 |
tcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaactcttcaacaaaata |
243 |
Q |
| |
|
||||||||||| | ||||| |||||||||||||||||||||| ||||| ||| ||| || ||| |||| | ||| || | ||||| | |||||| | |
|
|
| T |
8576297 |
tcctttttgccttttcacaagcagttctcaacctccttaaggcttttgaattctcactaatatcctctttgtacttgttcctgaactccttaacaaagtg |
8576396 |
T |
|
| Q |
244 |
gttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatcacccttaattgtgaggatagacaca |
343 |
Q |
| |
|
| |||||| ||||||||||||| | |||||| ||||| |||| ||| || ||||| || |||||||| | || ||||| |||||| ||||||||| |
|
|
| T |
8576397 |
atccaccattatgttatcaaagtcttggcctcctaggtgagtgtctccggcagtggccttgacttcgaagacattgttcttaactgtgagaatagacaca |
8576496 |
T |
|
| Q |
344 |
tcaaaagt |
351 |
Q |
| |
|
|||||||| |
|
|
| T |
8576497 |
tcaaaagt |
8576504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 360
Target Start/End: Original strand, 8590602 - 8590825
Alignment:
| Q |
137 |
gacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaactcttcaa |
236 |
Q |
| |
|
|||||| ||||||| ||||||||||| || ||| |||||||||| | | ||| ||||| ||| | ||||||||||||||| | | ||||| | | |
|
|
| T |
8590602 |
gacagtgtccttttagccctctcacaagctgttttcaacctcctaagagcccttgcgttcccacttaaatccactttattcttcctcctaaactccttca |
8590701 |
T |
|
| Q |
237 |
caaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatcacccttaattgtgaggat |
336 |
Q |
| |
|
| |||| || |||||||||||||||||||||||| ||||| ||||| || | ||| | ||||||||||| || || |||||| || | |||||| | |
|
|
| T |
8590702 |
ccaaatggtgaaccattctgttatcaaagtcctctcctcctaggtgggtatctccggaagtggcttttacatcaaagctatcacctttgagtgtgagaag |
8590801 |
T |
|
| Q |
337 |
agacacatcaaaagtaccgccacc |
360 |
Q |
| |
|
||||||||||||||| || ||||| |
|
|
| T |
8590802 |
agacacatcaaaagtgccaccacc |
8590825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 348
Target Start/End: Complemental strand, 29577864 - 29577665
Alignment:
| Q |
149 |
tttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaactcttcaacaaaatagttaa |
248 |
Q |
| |
|
|||||||||||||| |||||||||| | ||||||| | |||||||||| ||| |||||||| || |||||| | || ||||| | ||||| | | | | |
|
|
| T |
29577864 |
tttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaaagtggctca |
29577765 |
T |
|
| Q |
249 |
ccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatcacccttaattgtgaggatagacacatcaaa |
348 |
Q |
| |
|
||||| | ||||| |||||||| ||||| ||||| || | || || ||||| |||||||| || |||| |||||| |||||| | |||||||||||| |
|
|
| T |
29577764 |
ccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttcaaaactatcatccttaagtgtgagaagagacacatcaaa |
29577665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 270
Target Start/End: Complemental strand, 7877942 - 7877804
Alignment:
| Q |
132 |
caaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaactc |
231 |
Q |
| |
|
|||| |||||| ||||||| ||||||||||| ||||||||||||||||| | || | ||||| | || |||||||||||||||||| | || ||||| |
|
|
| T |
7877942 |
caaatgacagtgtccttttagccctctcacatgcagttctcaacctcctaagggccctcgggtttccaccaatgtccactttattcttcctcttaaactc |
7877843 |
T |
|
| Q |
232 |
ttcaacaaaatagttaaccattctgttatcaaagtcctc |
270 |
Q |
| |
|
|| |||| ||| | ||||||||||||||||||||| |
|
|
| T |
7877842 |
catcactaaatggttcaacattctgttatcaaagtcctc |
7877804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 351
Target Start/End: Original strand, 8570282 - 8570489
Alignment:
| Q |
144 |
tcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaac-tcttcaacaaaat |
242 |
Q |
| |
|
||||||||||||||||||| || ||||| |||||||| |||| ||||||||||| ||| || ||| | || |||||||| || ||| ||||| ||||| | |
|
|
| T |
8570282 |
tcctttttgccctctcacaagctgttcttaacctcctcaaggcttttgggttcctactaatatcctcgttgttcttcttcttgaacttcttc-acaaagt |
8570380 |
T |
|
| Q |
243 |
-agttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatcacccttaattgtgaggatagaca |
341 |
Q |
| |
|
||| || ||||||||||||||| || || ||||| ||||| |||| ||| || ||||| || ||||| | | | |||||| |||||| ||||||| |
|
|
| T |
8570381 |
gagtcaa-cattctgttatcaaaatcttcacctcccaggtgagtgtctccagcagtggccttgacttcatagttgttatccttaactgtgagaatagaca |
8570479 |
T |
|
| Q |
342 |
catcaaaagt |
351 |
Q |
| |
|
|||||||||| |
|
|
| T |
8570480 |
catcaaaagt |
8570489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 360
Target Start/End: Original strand, 8602036 - 8602161
Alignment:
| Q |
235 |
aacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatcacccttaattgtgagg |
334 |
Q |
| |
|
|||||| | ||| ||||||| ||||||||||||||| ||||||||||| |||| ||| | ||||| || ||||| || |||| | |||||||||||| |
|
|
| T |
8602036 |
aacaaagtggttcaccattcggttatcaaagtcctctcctccaaggtgtgtgtctccggaagtggccttgacttcaaagagattattcttaattgtgaga |
8602135 |
T |
|
| Q |
335 |
atagacacatcaaaagtaccgccacc |
360 |
Q |
| |
|
| ||| ||||||||||| || ||||| |
|
|
| T |
8602136 |
agagaaacatcaaaagttccaccacc |
8602161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 360
Target Start/End: Original strand, 8559408 - 8559520
Alignment:
| Q |
248 |
accattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatcacccttaattgtgaggatagacacatcaa |
347 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||| |||| ||| | ||||| || ||||| || |||| | |||||||||||| | ||| ||||||| |
|
|
| T |
8559408 |
accattctgttatcaaagtcctctcctccgaggtgtgtgtctccggaagtggccttgacttcaaagagattattcttaattgtgagaagagaaacatcaa |
8559507 |
T |
|
| Q |
348 |
aagtaccgccacc |
360 |
Q |
| |
|
|||| || ||||| |
|
|
| T |
8559508 |
aagttccaccacc |
8559520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 8609781 - 8609828
Alignment:
| Q |
37 |
gtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaa |
84 |
Q |
| |
|
|||||||||||||| |||||| || |||||||||||||||||| |||| |
|
|
| T |
8609781 |
gtccatgttaagttgctcaaacttcgcacgagtgattgatgaacaaaa |
8609828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 8609989 - 8610026
Alignment:
| Q |
245 |
ttaaccattctgttatcaaagtcctcgcctccaaggtg |
282 |
Q |
| |
|
||||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
8609989 |
ttaaccattctgtgatcaaagtcctctcctccaaggtg |
8610026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 8102532 - 8102568
Alignment:
| Q |
38 |
tccatgttaagttcctcaaatttggcacgagtgattg |
74 |
Q |
| |
|
||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
8102532 |
tccatgttaagttcctcaaatctggcacgggtgattg |
8102568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 303
Target Start/End: Original strand, 39985700 - 39985776
Alignment:
| Q |
227 |
aactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttt |
303 |
Q |
| |
|
||||||| |||||| | ||| ||||||||||| ||||| ||||| |||||||| || |||| ||| || |||||||| |
|
|
| T |
39985700 |
aactcttgaacaaagtggttcaccattctgttgtcaaaatcctcacctccaagatgggtgtctccggctgtggcttt |
39985776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 182; Significance: 3e-98; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 17 - 354
Target Start/End: Complemental strand, 16657841 - 16657504
Alignment:
| Q |
17 |
ttcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaa |
116 |
Q |
| |
|
||||||||||||||||||| ||||| |||| ||||||||| |||||||| |||||||||||||||||||| |||||| |||||||| ||||||||||| |
|
|
| T |
16657841 |
ttcatacactcattgaaaagatccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctgaaataaagaatctacctcaa |
16657742 |
T |
|
| Q |
117 |
cagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttatt |
216 |
Q |
| |
|
||||||| |||||||||||||| ||| |||| |||||||||||||| ||||||||||||||||| |||| | ||| ||||| ||| |||||||| ||||| |
|
|
| T |
16657741 |
cagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttgagttcccacttatgtccaccttatt |
16657642 |
T |
|
| Q |
217 |
cttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaataga |
316 |
Q |
| |
|
|||||||| ||||| || ||||| ||||| ||| ||||||||||||||||||| || |||||||| |||||||| || ||||||||||| || || | | |
|
|
| T |
16657641 |
cttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctcccccaaggtgagtgtttccggcagtggcttttacctcaaaaaca |
16657542 |
T |
|
| Q |
317 |
tcacccttaattgtgaggatagacacatcaaaagtacc |
354 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
16657541 |
tcacccttaattgtaaggatagacacatcaaaagtacc |
16657504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 49 - 351
Target Start/End: Original strand, 12234565 - 12234867
Alignment:
| Q |
49 |
ttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaacagtggtaacaaaagcaaaagacagtatcctt |
148 |
Q |
| |
|
||||||||| ||||| | | |||| ||||||||||| || || || |||||||| ||||||||||| || | ||||| | ||||||| | ||| |
|
|
| T |
12234565 |
ttcctcaaacttggccctattgatcgatgaagaaaaatcaatgccttcaaataaagaatctacctcaatggttgcaacaacaaggaaagacaatgatctt |
12234664 |
T |
|
| Q |
149 |
tttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaactcttcaacaaaatagttaa |
248 |
Q |
| |
|
|||||||||||||| |||||||| |||||||| |||| |||||| || | ||| ||||||||||| ||||| | || ||||||| | ||| ||||| | |
|
|
| T |
12234665 |
tttgccctctcacaagcagttcttaacctcctcaaggcttttggatttccactcatgtccacttttttctttctattgaactcttgagcaaggtagttta |
12234764 |
T |
|
| Q |
249 |
ccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatcacccttaattgtgaggatagacacatcaaa |
348 |
Q |
| |
|
|||||||||||||||||||||| || || ||||| |||||||| || |||||||| |||| ||| | || ||| || ||||| |||| |||||||||||| |
|
|
| T |
12234765 |
ccattctgttatcaaagtcctctcccccgaggtgagtgtttccggctgtggctttaacttggaagacattacctttgattgttaggagagacacatcaaa |
12234864 |
T |
|
| Q |
349 |
agt |
351 |
Q |
| |
|
||| |
|
|
| T |
12234865 |
agt |
12234867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 360
Target Start/End: Original strand, 43625256 - 43625599
Alignment:
| Q |
17 |
ttcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaa |
116 |
Q |
| |
|
|||| |||||| ||||||| ||||| || | ||| ||||||||||||||||||||||||||| | ||||| || || ||||||| ||||||||||| |
|
|
| T |
43625256 |
ttcaaacactcgttgaaaagatccatatttatttcatcaaatttggcacgagtgattgatgaaaagaagtcaataccacggaataaagaatctacctcaa |
43625355 |
T |
|
| Q |
117 |
cagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttatt |
216 |
Q |
| |
|
|||| | | |||||||||||||| |||||||| | ||||| || || ||||||||||| |||| || | ||| ||| | | | || ||||| || || |
|
|
| T |
43625356 |
tagtgctgaacgaagcaaaagacagtgtcctttttcctctctcgcatgccgttctcaaccttcttatggctcttgagtttccaataatatccacattgtt |
43625455 |
T |
|
| Q |
217 |
cttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaataga |
316 |
Q |
| |
|
|||||| | || ||||| |||| ||||| |||||||| | |||||||||||| ||||||||||| |||||||| || |||||||| || ||| | |
|
|
| T |
43625456 |
cttcttctcaaattcttctgcaaagtagttcaccattctatcatcaaagtcctctcctccaaggtgagtgtttccagcagtggctttaacacggaagacc |
43625555 |
T |
|
| Q |
317 |
tcacccttaattgtgaggatagacacatcaaaagtaccgccacc |
360 |
Q |
| |
|
| |||||||||| || |||||||||||||||||||| ||||| |
|
|
| T |
43625556 |
ttgtccttaattgtaagtatagacacatcaaaagtaccaccacc |
43625599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 50 - 288
Target Start/End: Original strand, 7542103 - 7542341
Alignment:
| Q |
50 |
tcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaacagtggtaacaaaagcaaaagacagtatccttt |
149 |
Q |
| |
|
|||||||| ||||| | | |||| |||||||||||||| || || |||||||| ||||||||||| ||||| ||||| | ||||| ||| |||| |
|
|
| T |
7542103 |
tcctcaaacttggccctattgatcgatgaagaaaagtcaatgccttgaaataaagaatctacctcaatagtggcaacaacaaggaaagaaagtgatcttt |
7542202 |
T |
|
| Q |
150 |
ttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaactcttcaacaaaatagttaac |
249 |
Q |
| |
|
||||||||||||| ||||||||||||||||| |||| |||||| |||| ||| ||||||||||| ||||| | || ||||||| ||||| ||||| | |
|
|
| T |
7542203 |
ttgccctctcacaagcagttctcaacctcctcaaggcttttggattcccactaatgtccactttgttctttctcttgaactcttgtacaaagtagttcgc |
7542302 |
T |
|
| Q |
250 |
cattctgttatcaaagtcctcgcctccaaggtgcgtgtt |
288 |
Q |
| |
|
|||||| ||||||||||| || || |||||||| ||||| |
|
|
| T |
7542303 |
cattctattatcaaagtcttctccaccaaggtgagtgtt |
7542341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 134 - 360
Target Start/End: Complemental strand, 16662199 - 16661973
Alignment:
| Q |
134 |
aaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaactctt |
233 |
Q |
| |
|
||||| ||| ||||||| ||| | ||||| | ||||||||||||||| |||| | |||| |||| | |||| |||||||| |||||| | || || |||| |
|
|
| T |
16662199 |
aaagagagtgtccttttcgccttttcacaagaagttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctt |
16662100 |
T |
|
| Q |
234 |
caacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatcacccttaattgtgag |
333 |
Q |
| |
|
||||| ||||| | ||||||||||||||||||||| || || ||||| |||||||| | |||||||| ||||| || | |||||| ||||||||||| |
|
|
| T |
16662099 |
tcacaaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgag |
16662000 |
T |
|
| Q |
334 |
gatagacacatcaaaagtaccgccacc |
360 |
Q |
| |
|
|| ||||||||||||||| || ||||| |
|
|
| T |
16661999 |
gagagacacatcaaaagtcccaccacc |
16661973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 17 - 360
Target Start/End: Original strand, 14703252 - 14703595
Alignment:
| Q |
17 |
ttcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaa |
116 |
Q |
| |
|
|||| ||||||||| ||||||||||| || | ||| ||||| ||||| | | |||| |||||||||||||| || | |||||||||||||||||||| |
|
|
| T |
14703252 |
ttcacacactcattaaaaaagtccatattcatttcttcaaacttggccctattgatcgatgaagaaaagtcaatgcattgaaataaagcatctacctcaa |
14703351 |
T |
|
| Q |
117 |
cagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttatt |
216 |
Q |
| |
|
||||| |||| ||||| ||| | |||||||||||||| || || |||||||| |||||||||| |||||| || | ||| ||||||| | | || |
|
|
| T |
14703352 |
tagtggcgacaacttggaaagaaagtgttctttttgccctctcgcaagcggttctcaagctccttaaggcttttggatttccactaatgtccaatctgtt |
14703451 |
T |
|
| Q |
217 |
cttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaataga |
316 |
Q |
| |
|
|| | || ||||||| |||||| ||||| |||||||||||||| |||||||| || || ||||| |||||||| || || || || | || ||| | |
|
|
| T |
14703452 |
ttttctcttgaactcttgaacaaagtagttcaccattctgttatcgaagtcctctcccccgaggtgagtgtttccagcagtagccttaatttggaagacg |
14703551 |
T |
|
| Q |
317 |
tcacccttaattgtgaggatagacacatcaaaagtaccgccacc |
360 |
Q |
| |
|
||||||||||| |||| |||||| ||||||||||| ||||| |
|
|
| T |
14703552 |
gtgcccttaattgttaggagagacacgtcaaaagtaccaccacc |
14703595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 49 - 360
Target Start/End: Complemental strand, 12245698 - 12245387
Alignment:
| Q |
49 |
ttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaacagtggtaacaaaagcaaaagacagtatcctt |
148 |
Q |
| |
|
||||||||| || || ||| |||| ||||||||||| || || || |||||||| ||||||||||| ||| | ||||| | ||| || ||||| ||| |
|
|
| T |
12245698 |
ttcctcaaactttgcccgattgatggatgaagaaaaatcaatgccttgaaataaagaatctacctcaatagttgcaacaacaagaaacgaaagtattctt |
12245599 |
T |
|
| Q |
149 |
tttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaactcttcaacaaaatagttaa |
248 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||| |||| ||||| | ||| || |||| ||| ||||| | || ||||| | |||| ||||| | |
|
|
| T |
12245598 |
tttgccctctcacaagcagttctcaatctcctcaaggcttttgaacttgcactaatatccaatttgttctttctcttgaactcctgtgcaaagtagttta |
12245499 |
T |
|
| Q |
249 |
ccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatcacccttaattgtgaggatagacacatcaaa |
348 |
Q |
| |
|
||||||| |||||||| ||||| ||||||||||| |||||||| || ||||| || |||| ||| | | | ||||||| || |||||||| || ||||| |
|
|
| T |
12245498 |
ccattctattatcaaaatcctctcctccaaggtgagtgtttccagcagtggccttaacttggaagatgttatccttaatagttaggatagaaacgtcaaa |
12245399 |
T |
|
| Q |
349 |
agtaccgccacc |
360 |
Q |
| |
|
||| || ||||| |
|
|
| T |
12245398 |
agtgccaccacc |
12245387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 49 - 191
Target Start/End: Original strand, 11999283 - 11999425
Alignment:
| Q |
49 |
ttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaacagtggtaacaaaagcaaaagacagtatcctt |
148 |
Q |
| |
|
||||||||| || || ||| |||| ||||||||||| || || || |||||||| ||||||||||| ||| | ||||| | ||| || ||||| ||| |
|
|
| T |
11999283 |
ttcctcaaactttgcccgattgatggatgaagaaaaatcaatgccttgaaataaagaatctacctcaatagttgcaacaacaagaaatgatagtattctt |
11999382 |
T |
|
| Q |
149 |
tttgccctctcacaggcagttctcaacctccttaaggattttg |
191 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||| ||||| |
|
|
| T |
11999383 |
tttgccctctcacaagcagttctcaacctcctcaaggcttttg |
11999425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 49 - 360
Target Start/End: Complemental strand, 12258873 - 12258562
Alignment:
| Q |
49 |
ttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaacagtggtaacaaaagcaaaagacagtatcctt |
148 |
Q |
| |
|
||||||||| ||||||||| ||||||||| |||||| || || || | |||||| ||||| ||||| ||| | ||||| | | |||| ||| ||| |
|
|
| T |
12258873 |
ttcctcaaacttggcacgattgattgatgcagaaaaatcaatgccatcacataaagaatctatctcaatagttgcaacaacaagataagaaagtgatctt |
12258774 |
T |
|
| Q |
149 |
tttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaactcttcaacaaaatagttaa |
248 |
Q |
| |
|
||||| |||||||| || ||| |||| ||||| || | | |||| || | ||| || || ||||| ||||| | || |||||||| ||||| || | | |
|
|
| T |
12258773 |
tttgcactctcacaagctgttttcaatctcctcaaagctcttggatttccacttatatctactttgttctttctcttgaactcttctacaaagtaactca |
12258674 |
T |
|
| Q |
249 |
ccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatcacccttaattgtgaggatagacacatcaaa |
348 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||||||||||| || || || || |||| || | || | ||||||| || || | |||||||||||| |
|
|
| T |
12258673 |
ccattctattatcaaagtcctctcctccaaggtgcgtgtttccagctgtagccttaacttgaaagacattatccttaatggttagtagagacacatcaaa |
12258574 |
T |
|
| Q |
349 |
agtaccgccacc |
360 |
Q |
| |
|
||| || ||||| |
|
|
| T |
12258573 |
agtgccaccacc |
12258562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 17704169 - 17704117
Alignment:
| Q |
227 |
aactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaag |
279 |
Q |
| |
|
||||||| |||||| ||||| ||||||||||||| ||| ||||| |||||||| |
|
|
| T |
17704169 |
aactcttgaacaaagtagttcaccattctgttattaaaatcctcacctccaag |
17704117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 162; Significance: 2e-86; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 19 - 360
Target Start/End: Complemental strand, 4678879 - 4678539
Alignment:
| Q |
19 |
catacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaaca |
118 |
Q |
| |
|
||||||||| ||||||| |||||| |||| ||||||||| ||||||||||| || |||||||||||||| |||||| |||||||| |||||| |||||| |
|
|
| T |
4678879 |
catacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctac-tcaaca |
4678781 |
T |
|
| Q |
119 |
gtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattct |
218 |
Q |
| |
|
||||| ||||| || ||||| ||| |||| ||||||||||| ||||||||||||||||||||||||| ||||| |||| ||| |||||||| ||||||| |
|
|
| T |
4678780 |
gtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccttaagggttttgcgttcttactaatgtccacattattct |
4678681 |
T |
|
| Q |
219 |
tcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatc |
318 |
Q |
| |
|
||||||| ||||| || ||||| ||||| ||||||||||||||||||||||| || || ||||| |||||||| || |||||||||||||| || | | | |
|
|
| T |
4678680 |
tctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacctaggtgagtgtttccagcagtggcttttacttcaaagacacc |
4678581 |
T |
|
| Q |
319 |
acccttaattgtgaggatagacacatcaaaagtaccgccacc |
360 |
Q |
| |
|
|||||| ||| | ||||||||||||||||||||||| ||||| |
|
|
| T |
4678580 |
acccttgattttaaggatagacacatcaaaagtaccaccacc |
4678539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 360
Target Start/End: Original strand, 15594878 - 15595221
Alignment:
| Q |
17 |
ttcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaa |
116 |
Q |
| |
|
|||||||| || || |||||||||||||| | ||| ||||| |||| |||||| | |||||| | ||||| || || |||||||| ||||||||||| |
|
|
| T |
15594878 |
ttcatacaatccttaaaaaagtccatgttgatttcttcaaacttggaacgagtaaccgatgaaaagaagtcaataccgttaaataaacaatctacctcaa |
15594977 |
T |
|
| Q |
117 |
cagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttatt |
216 |
Q |
| |
|
|| || ||| || |||||| |||| |||||||||||| || || ||||||||||| ||||| |||| ||||||||| | | || |||||||| || |
|
|
| T |
15594978 |
tggtagtgacagtagtaaaagagagtaccctttttgccctttcgcacgcagttctcaatctcctcaaggcccttgggttcccagtaatatccactttgtt |
15595077 |
T |
|
| Q |
217 |
cttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaataga |
316 |
Q |
| |
|
|||| | || || || | |||| ||||| ||||||||||||||||||||||| ||||||||||| |||||||| | ||||| || |||| ||| | |
|
|
| T |
15595078 |
cttcgtcttgaattcctgcgcaaagtagttgaccattctgttatcaaagtcctctcctccaaggtgagtgtttccgcctgtggccttaacttggaagacc |
15595177 |
T |
|
| Q |
317 |
tcacccttaattgtgaggatagacacatcaaaagtaccgccacc |
360 |
Q |
| |
|
| |||||||||| |||||||||||||||||||| || ||||| |
|
|
| T |
15595178 |
ttgtccttaattgttaggatagacacatcaaaagtgccaccacc |
15595221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 249 - 360
Target Start/End: Complemental strand, 34466885 - 34466774
Alignment:
| Q |
249 |
ccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatcacccttaattgtgaggatagacacatcaaa |
348 |
Q |
| |
|
||||||| |||||||||||||| | ||| ||||| ||||| || | ||||| || ||||| || | || | |||||||||| |||| |||||||||||| |
|
|
| T |
34466885 |
ccattctattatcaaagtcctctcgtccgaggtgagtgttaccagaagtggccttaacttcaaagacattatccttaattgtaaggagagacacatcaaa |
34466786 |
T |
|
| Q |
349 |
agtaccgccacc |
360 |
Q |
| |
|
||| || ||||| |
|
|
| T |
34466785 |
agtcccaccacc |
34466774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 17 - 300
Target Start/End: Original strand, 28219762 - 28220045
Alignment:
| Q |
17 |
ttcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaa |
116 |
Q |
| |
|
|||| |||||||||||||| ||||| || | ||||||||| || |||||||| ||||||||| | || || || || |||||||| ||||||||||| |
|
|
| T |
28219762 |
ttcaaacactcattgaaaagatccatattgatttcctcaaacttagcacgagtaattgatgaaaagaaatcaatgccttcaaataaagaatctacctcaa |
28219861 |
T |
|
| Q |
117 |
cagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttatt |
216 |
Q |
| |
|
|||| |||| ||||||||| ||| |||||||||| |||| || || ||||||||||||||||||| | ||| ||| | | | |||||||| || || |
|
|
| T |
28219862 |
tggtggcgacaacagcaaaagatagtgtcctttttgctctcttgcacgctgttctcaacctccttaaggctcttgagtttccagtaatgtccaccttgtt |
28219961 |
T |
|
| Q |
217 |
cttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggc |
300 |
Q |
| |
|
|||||| || ||||| || | || ||||| ||||| || ||||||||||||| || || ||||| |||||||| |||||||| |
|
|
| T |
28219962 |
cttcttcttaaactcctctgcgaagtagttcaccatcctactatcaaagtcctctcccccgaggtgagtgtttccagcggtggc |
28220045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 97 - 314
Target Start/End: Original strand, 43744740 - 43744957
Alignment:
| Q |
97 |
aaataaagcatctacctcaacagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttc |
196 |
Q |
| |
|
|||||||| ||||||||||| |||||| |||| ||||||||| | | |||||||||| || || || || ||||||||||||||||| | | ||||||| |
|
|
| T |
43744740 |
aaataaagaatctacctcaatagtggtgacaacagcaaaagataatgtcctttttgctctttcgcatgctgttctcaacctccttaatgctcttgggttt |
43744839 |
T |
|
| Q |
197 |
cgactgatgtccactttattcttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcgg |
296 |
Q |
| |
|
| | | |||||||| || |||||||| || ||||| || | || ||||| ||||| || |||||||| ||||| ||||| ||||| |||||||| | || |
|
|
| T |
43744840 |
ccagtaatgtccaccttgttcttcttcttaaactcctctgcgaagtagttcaccatcctattatcaaaatcctctcctccgaggtgagtgtttccagagg |
43744939 |
T |
|
| Q |
297 |
tggcttttacttcgaata |
314 |
Q |
| |
|
|||| || |||| ||||| |
|
|
| T |
43744940 |
tggccttcacttggaata |
43744957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 144 - 312
Target Start/End: Original strand, 12528475 - 12528643
Alignment:
| Q |
144 |
tcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaactcttcaacaaaata |
243 |
Q |
| |
|
||||||| ||| |||| ||| ||||||||| ||||||| || ||||| ||||| | | ||||| ||||| |||||| | || ||||||| ||||| | |
|
|
| T |
12528475 |
tccttttcgccttctcgcagttagttctcaatctccttagggcttttgagttcccaataatgtcaactttgttcttcctcttaaactctttcacaaagtg |
12528574 |
T |
|
| Q |
244 |
gttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaa |
312 |
Q |
| |
|
|| ||||||| |||||||||||||| ||||||||||| |||| ||| || ||||| || |||||||| |
|
|
| T |
12528575 |
attcaccattcgattatcaaagtcctctcctccaaggtgagtgtctccggcagtggccttgacttcgaa |
12528643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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