View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8060_low_8 (Length: 264)
Name: NF8060_low_8
Description: NF8060
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8060_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 35093688 - 35093453
Alignment:
| Q |
14 |
agaagactgatgtgtggagtctcggtatactcattttggaaattctaaccggaaaacttcctgctaatttcctacaacaaagtggtaaagggagcgagtt |
113 |
Q |
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| T |
35093688 |
agaagactgatgtgtggagtctcggtatactcattttggaaattctaaccggaaaacttcctgctaatttcctacaacaaagtggtaaagggagcgagtt |
35093589 |
T |
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| Q |
114 |
gagtttagcgaattgggtggattctgttgtaccggaagagtggagtagcgaggtttttgataaagatatggagttaacaagtaataatgagggggagatg |
213 |
Q |
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| T |
35093588 |
gagtttagcgaattgggtggattctgttgtaccggaagagtggagtagcgaggtttttgataaagatatggagttaacaagtaataatgagggggagatg |
35093489 |
T |
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| Q |
214 |
gttaagcttttgaagattgcattggaatgttgtgat |
249 |
Q |
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| T |
35093488 |
gttaagcttttgaagattgcattggaatgttgtgat |
35093453 |
T |
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