View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8061_high_41 (Length: 327)
Name: NF8061_high_41
Description: NF8061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8061_high_41 |
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Alignment Details
Target: chr5 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 32 - 314
Target Start/End: Original strand, 29287627 - 29287908
Alignment:
| Q |
32 |
aaagcgtccattttgcagaatagaaaaatcttcaagaaagcacaatcatcatgtcctaatgcaattctcctaaggttaattaatcaattacttgtccaaa |
131 |
Q |
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| T |
29287627 |
aaagcgtacattttgcagaatagaaaaatcttcaagaaagcacaatcatcatgtcctaatgcaattctcctaaggttaattaatcaattacttgtccaaa |
29287726 |
T |
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| Q |
132 |
ttccaaactcttatcaattcaatagtaatatcttctttcgtaaggaaaacaacccacatgggagccaatctccaaaactttcccattcccaatatgaaaa |
231 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
29287727 |
ttccaaactcttatcaattcaatagtaatatcttctttcgtaaggaaaacaacccacatgggagccaatctccaaaactttcccattcccaatatg-caa |
29287825 |
T |
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| Q |
232 |
taaataaataaataaaggagaatacaatgtactcactttttatttaccaacgtagggttgctgacacacctttttggtcattc |
314 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
29287826 |
taaataaataaataaagaagaatacaatgtactcactttttatttaccaacatagggttgctgacacacctttttggtcattc |
29287908 |
T |
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