View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8061_high_45 (Length: 312)
Name: NF8061_high_45
Description: NF8061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8061_high_45 |
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Alignment Details
Target: chr5 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 16 - 298
Target Start/End: Original strand, 13973560 - 13973849
Alignment:
| Q |
16 |
ctatgtgtgcgtggtctctgaaaaccaaaccaaacccatactcaatcagcgatgttaccatatgaaaaagtttgtcctcattcaaggacaacgaatcatc |
115 |
Q |
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| T |
13973560 |
ctatgtgtgcgtggtctctgaaaaccaaaccaaacccatactcaatcagcgatgttaccatatgaaaaagtttgtcctcattcaaggacaacgaatcatc |
13973659 |
T |
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| Q |
116 |
atcatcatagcatcatttcccatcttcccttcaatgtaatcatgcatactttgagt-------cataaaacttcaggttccttattaaggccaattagaa |
208 |
Q |
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| T |
13973660 |
atcatcatatcatcatttcccatcttcccttcaatgtaatcatgcatactttgagtctttgaccataaaacttcaggttccttattaaggccaattagaa |
13973759 |
T |
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| Q |
209 |
ggggaatcttaacacgagaaatacatggagctccttattttattgtgtttacagatcttctcaaatactacatggaataaggttttaaat |
298 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
13973760 |
ggggaatcttaacacgagaaatacatggagctccttattttattgtgtttacagatcttctcaaacactacatggaataaggttttaaat |
13973849 |
T |
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