View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8061_high_52 (Length: 275)

Name: NF8061_high_52
Description: NF8061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8061_high_52
NF8061_high_52
[»] chr2 (26 HSPs)
chr2 (187-275)||(7665517-7665605)
chr2 (8-126)||(36207136-36207251)
chr2 (7-126)||(9708786-9708903)
chr2 (7-125)||(9708033-9708150)
chr2 (7-121)||(3106888-3107001)
chr2 (7-123)||(15830760-15830873)
chr2 (64-125)||(15830070-15830131)
chr2 (129-185)||(7665693-7665749)
chr2 (1-126)||(36207865-36207989)
chr2 (7-126)||(4646057-4646174)
chr2 (7-124)||(7277938-7278054)
chr2 (7-54)||(3106313-3106360)
chr2 (7-54)||(7337941-7337988)
chr2 (7-54)||(38935883-38935930)
chr2 (9-54)||(18060409-18060454)
chr2 (7-46)||(12138649-12138688)
chr2 (7-54)||(20463574-20463621)
chr2 (7-54)||(23849113-23849160)
chr2 (7-54)||(35059112-35059159)
chr2 (64-126)||(38937576-38937637)
chr2 (7-53)||(41425578-41425624)
chr2 (7-44)||(1090670-1090707)
chr2 (7-52)||(21545253-21545298)
chr2 (9-54)||(43207014-43207059)
chr2 (1-54)||(44747874-44747927)
chr2 (7-55)||(22064068-22064116)
[»] chr3 (38 HSPs)
chr3 (9-126)||(35233904-35234021)
chr3 (7-126)||(1092176-1092293)
chr3 (7-126)||(24782988-24783104)
chr3 (9-125)||(50672432-50672545)
chr3 (7-126)||(40066394-40066512)
chr3 (7-125)||(35235748-35235865)
chr3 (7-121)||(54603035-54603148)
chr3 (64-125)||(54627244-54627305)
chr3 (64-125)||(54627930-54627991)
chr3 (7-123)||(55482179-55482293)
chr3 (7-126)||(32751591-32751709)
chr3 (7-126)||(54492881-54492997)
chr3 (7-125)||(24782251-24782356)
chr3 (64-126)||(32750904-32750966)
chr3 (7-125)||(40065651-40065768)
chr3 (9-126)||(20411031-20411147)
chr3 (7-123)||(20819384-20819499)
chr3 (7-123)||(35235005-35235120)
chr3 (7-126)||(46650981-46651100)
chr3 (7-122)||(40791516-40791630)
chr3 (7-125)||(54602290-54602405)
chr3 (64-122)||(20820133-20820191)
chr3 (64-126)||(35234620-35234682)
chr3 (9-122)||(31584851-31584963)
chr3 (7-54)||(55481502-55481549)
chr3 (64-126)||(40009986-40010048)
chr3 (13-54)||(33128582-33128623)
chr3 (1-54)||(44405261-44405314)
chr3 (7-54)||(8015516-8015563)
chr3 (7-54)||(29588949-29588995)
chr3 (9-54)||(14899342-14899387)
chr3 (9-54)||(33981560-33981605)
chr3 (9-54)||(38667280-38667325)
chr3 (9-54)||(39285080-39285125)
chr3 (9-54)||(40278272-40278317)
chr3 (1-54)||(42248868-42248921)
chr3 (9-54)||(43914601-43914646)
chr3 (9-54)||(49316202-49316247)
[»] chr5 (31 HSPs)
chr5 (1-125)||(17647443-17647566)
chr5 (7-126)||(6915256-6915373)
chr5 (7-126)||(26359683-26359801)
chr5 (15-126)||(5574136-5574245)
chr5 (2-125)||(6914284-6914403)
chr5 (7-114)||(8505843-8505950)
chr5 (7-125)||(5574869-5574986)
chr5 (7-123)||(17648194-17648309)
chr5 (7-126)||(24087314-24087432)
chr5 (7-125)||(26359302-26359419)
chr5 (7-122)||(19293060-19293175)
chr5 (64-127)||(37895847-37895910)
chr5 (9-122)||(5577205-5577315)
chr5 (7-54)||(6809376-6809423)
chr5 (7-54)||(20731022-20731069)
chr5 (7-54)||(34217198-34217245)
chr5 (7-54)||(38424853-38424900)
chr5 (8-54)||(14197888-14197934)
chr5 (9-54)||(25751872-25751917)
chr5 (9-54)||(38090493-38090538)
chr5 (7-54)||(2301299-2301346)
chr5 (7-54)||(7950952-7950999)
chr5 (7-54)||(38424265-38424312)
chr5 (7-46)||(38977723-38977762)
chr5 (1-55)||(9587668-9587722)
chr5 (9-54)||(746506-746551)
chr5 (9-54)||(2745395-2745440)
chr5 (9-54)||(27500818-27500863)
chr5 (9-54)||(29235619-29235664)
chr5 (9-54)||(29835975-29836020)
chr5 (9-54)||(36778357-36778402)
[»] chr6 (11 HSPs)
chr6 (8-126)||(11099798-11099915)
chr6 (7-126)||(28538098-28538216)
chr6 (7-125)||(28537688-28537805)
chr6 (64-126)||(1563114-1563176)
chr6 (8-126)||(1563809-1563923)
chr6 (7-122)||(23075157-23075269)
chr6 (7-125)||(11099094-11099211)
chr6 (7-54)||(25404242-25404289)
chr6 (9-54)||(8590580-8590625)
chr6 (9-54)||(16894579-16894624)
chr6 (9-54)||(32597110-32597155)
[»] chr8 (26 HSPs)
chr8 (2-126)||(25977-26100)
chr8 (7-126)||(25630340-25630456)
chr8 (7-126)||(44308270-44308388)
chr8 (7-123)||(26731-26846)
chr8 (9-126)||(25631075-25631189)
chr8 (7-126)||(15565429-15565547)
chr8 (9-125)||(9879072-9879187)
chr8 (7-122)||(12502997-12503109)
chr8 (7-125)||(25094294-25094411)
chr8 (64-126)||(15730713-15730774)
chr8 (7-125)||(20832616-20832733)
chr8 (81-126)||(20831949-20831994)
chr8 (70-117)||(12502312-12502359)
chr8 (64-123)||(15564740-15564799)
chr8 (7-45)||(37746462-37746500)
chr8 (86-126)||(6869218-6869258)
chr8 (65-121)||(14024127-14024183)
chr8 (7-54)||(3416830-3416877)
chr8 (7-54)||(26431463-26431510)
chr8 (7-54)||(31820464-31820511)
chr8 (8-54)||(9263841-9263887)
chr8 (7-45)||(31819881-31819919)
chr8 (7-45)||(39864105-39864143)
chr8 (9-54)||(3177949-3177994)
chr8 (9-54)||(12764252-12764297)
chr8 (9-54)||(39584486-39584531)
[»] chr1 (48 HSPs)
chr1 (7-123)||(21247355-21247470)
chr1 (7-126)||(39365001-39365120)
chr1 (7-126)||(40315399-40315518)
chr1 (7-126)||(1799607-1799725)
chr1 (7-126)||(23703651-23703768)
chr1 (7-126)||(29487447-29487566)
chr1 (7-126)||(44431347-44431466)
chr1 (7-125)||(25376895-25377010)
chr1 (7-125)||(46294603-46294720)
chr1 (25-126)||(16835270-16835370)
chr1 (7-126)||(16798064-16798183)
chr1 (7-125)||(16834529-16834644)
chr1 (7-125)||(44432093-44432210)
chr1 (7-125)||(46295331-46295448)
chr1 (7-125)||(1798928-1799045)
chr1 (7-136)||(48731426-48731554)
chr1 (71-124)||(11202031-11202084)
chr1 (64-126)||(27234630-27234692)
chr1 (64-125)||(19076208-19076269)
chr1 (64-125)||(19124098-19124159)
chr1 (71-126)||(42774944-42774999)
chr1 (1-122)||(45141627-45141746)
chr1 (7-54)||(40116841-40116888)
chr1 (7-125)||(21246615-21246730)
chr1 (64-125)||(23703242-23703302)
chr1 (7-54)||(26615691-26615738)
chr1 (9-54)||(9033733-9033778)
chr1 (65-122)||(18806844-18806900)
chr1 (9-54)||(27134436-27134481)
chr1 (9-54)||(38623726-38623771)
chr1 (7-54)||(13698214-13698261)
chr1 (7-54)||(26537667-26537714)
chr1 (7-54)||(32814967-32815014)
chr1 (7-54)||(35156051-35156098)
chr1 (7-54)||(42233528-42233575)
chr1 (7-54)||(48720934-48720981)
chr1 (9-52)||(49216873-49216916)
chr1 (9-54)||(8742523-8742568)
chr1 (9-54)||(9034497-9034542)
chr1 (9-54)||(11707387-11707432)
chr1 (1-54)||(22389082-22389135)
chr1 (9-54)||(35392647-35392692)
chr1 (9-54)||(36723930-36723975)
chr1 (9-54)||(43505901-43505946)
chr1 (9-54)||(46585495-46585540)
chr1 (7-55)||(12770231-12770279)
chr1 (10-54)||(38833673-38833717)
chr1 (7-55)||(52869823-52869871)
[»] chr7 (35 HSPs)
chr7 (7-126)||(26928236-26928355)
chr7 (7-126)||(26831693-26831811)
chr7 (7-125)||(14102981-14103098)
chr7 (7-125)||(14412998-14413115)
chr7 (7-122)||(29417955-29418069)
chr7 (64-126)||(15753135-15753197)
chr7 (7-123)||(14103726-14103842)
chr7 (7-123)||(14413743-14413859)
chr7 (8-126)||(15752388-15752502)
chr7 (7-122)||(34958976-34959090)
chr7 (64-126)||(36897611-36897674)
chr7 (64-125)||(26832441-26832502)
chr7 (68-120)||(44950542-44950594)
chr7 (7-122)||(17774454-17774566)
chr7 (7-105)||(43759652-43759749)
chr7 (7-54)||(33227831-33227878)
chr7 (64-126)||(42260899-42260960)
chr7 (9-54)||(16083148-16083193)
chr7 (9-54)||(24213265-24213310)
chr7 (9-54)||(33210425-33210470)
chr7 (9-54)||(34345846-34345891)
chr7 (7-54)||(2755911-2755958)
chr7 (7-54)||(23678764-23678811)
chr7 (7-54)||(31308402-31308448)
chr7 (7-45)||(21125574-21125612)
chr7 (8-54)||(29644889-29644935)
chr7 (9-54)||(19072076-19072121)
chr7 (9-54)||(21366409-21366454)
chr7 (9-54)||(34345388-34345433)
chr7 (9-54)||(35668410-35668455)
chr7 (9-54)||(38184340-38184385)
chr7 (9-54)||(38449974-38450019)
chr7 (9-54)||(48343734-48343779)
chr7 (6-54)||(33696651-33696699)
chr7 (7-55)||(45259061-45259109)
[»] chr4 (45 HSPs)
chr4 (7-126)||(36112051-36112170)
chr4 (9-126)||(42259445-42259560)
chr4 (7-126)||(6336875-6336993)
chr4 (7-125)||(1614746-1614863)
chr4 (7-126)||(56443292-56443408)
chr4 (7-126)||(17215099-17215214)
chr4 (7-125)||(56444033-56444149)
chr4 (7-123)||(1613610-1613725)
chr4 (66-126)||(55082656-55082716)
chr4 (7-126)||(42260120-42260239)
chr4 (7-126)||(48083108-48083224)
chr4 (7-116)||(23590641-23590749)
chr4 (7-125)||(55083314-55083431)
chr4 (64-109)||(4630745-4630790)
chr4 (7-126)||(12800375-12800498)
chr4 (7-54)||(15739577-15739624)
chr4 (7-54)||(52177266-52177313)
chr4 (64-122)||(39334236-39334293)
chr4 (9-54)||(220720-220765)
chr4 (64-121)||(6077361-6077418)
chr4 (64-121)||(7389574-7389631)
chr4 (7-107)||(7862765-7862864)
chr4 (7-54)||(4940991-4941038)
chr4 (7-54)||(36111642-36111689)
chr4 (7-55)||(25705985-25706033)
chr4 (71-123)||(48083830-48083882)
chr4 (7-54)||(9359752-9359799)
chr4 (7-54)||(12594737-12594784)
chr4 (7-46)||(23161260-23161299)
chr4 (7-54)||(23465773-23465820)
chr4 (7-54)||(38575705-38575751)
chr4 (7-54)||(40145809-40145856)
chr4 (9-47)||(205081-205119)
chr4 (9-51)||(1565108-1565150)
chr4 (12-54)||(55778130-55778172)
chr4 (12-54)||(55842310-55842352)
chr4 (1-54)||(7862024-7862077)
chr4 (1-54)||(22535859-22535912)
chr4 (9-54)||(29617464-29617509)
chr4 (9-54)||(38392193-38392238)
chr4 (9-54)||(39633471-39633516)
chr4 (9-54)||(40034254-40034299)
chr4 (9-54)||(41904617-41904662)
chr4 (9-54)||(42987938-42987983)
chr4 (9-54)||(46614609-46614654)
[»] scaffold0132 (1 HSPs)
scaffold0132 (1-126)||(42283-42407)
[»] scaffold0340 (2 HSPs)
scaffold0340 (7-125)||(1468-1585)
scaffold0340 (7-123)||(2205-2319)
[»] scaffold0113 (1 HSPs)
scaffold0113 (64-123)||(12694-12753)
[»] scaffold0219 (1 HSPs)
scaffold0219 (7-120)||(22290-22402)
[»] scaffold0945 (1 HSPs)
scaffold0945 (7-54)||(2102-2149)
[»] scaffold0083 (1 HSPs)
scaffold0083 (7-54)||(3390-3437)
[»] scaffold0060 (1 HSPs)
scaffold0060 (7-54)||(67224-67271)
[»] scaffold0214 (1 HSPs)
scaffold0214 (9-54)||(28598-28643)
[»] scaffold0063 (1 HSPs)
scaffold0063 (1-53)||(34150-34201)


Alignment Details
Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 187 - 275
Target Start/End: Complemental strand, 7665605 - 7665517
Alignment:
Q  187 atactattggtccaccatgccgtaatacaccaaaaaatacgtcagaaagtgtgacaaaggccaacaatatagagatatgcacatagatt 275  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  7665605 atactattggtccaccatgccgtaatacaccaaaaaatacgacagaaagtgtgacaaatgccaacaatatagagatatgcacatagatt 7665517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 36207136 - 36207251
Alignment:
Q  8 gttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagcat 107  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||         ||||| ||||||||| | |||||||||||| |||||||||||||    
T  36207136 gttttgcacttatgtgtaaaatgtcccatgaacttgaaaatttatat---ttttttcttattcttaaaagtgattgcattatcacttaattgtggagcat 36207232  T
Q  108 attagctaagttttgacgg 126  Q
    |||||||||||||||||||    
T  36207233 attagctaagttttgacgg 36207251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 9708903 - 9708786
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||||||||| |||||| ||| ||||||| |||||||||||         ||||||||||||||| |||||||||||||||||||||||||||    
T  9708903 agttttgtacttatgtgcaaaatgccccctgaactttaaaatttatat--tttttttcttatccttaaaagtgactgcattatcactgaattgtggagca 9708806  T
Q  107 tattagctaagttttgacgg 126  Q
    ||||||||||||||||||||    
T  9708805 tattagctaagttttgacgg 9708786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 9708033 - 9708150
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||| ||| | |||||||||||||||||         ||||||||||||||| | |||||||||||||||||||||||||    
T  9708033 agttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat-tttgttttcttatccttaaaagtgattgcattatcactgaattgtggagca 9708131  T
Q  107 tattagctaagttttgacg 125  Q
    |||||||||||||||||||    
T  9708132 tattagctaagttttgacg 9708150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 3107001 - 3106888
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||| ||| ||||||| |||||||||||         ||||||||||||||| |||||||||||||||||||||||||||    
T  3107001 agttttgcacttatgtgcaaaatgccccatgaacttaaaaatttatat-atttttttcttatccttaaaagtgactgcattatcactgaattgtggagca 3106903  T
Q  107 tattagctaagtttt 121  Q
    |||||| ||||||||    
T  3106902 tattagttaagtttt 3106888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 7 - 123
Target Start/End: Complemental strand, 15830873 - 15830760
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||||||||| |||||| ||| | |||||||||||||||||          |||||||||||||| |||||||||||||||||||||||||||    
T  15830873 agttttgtacttatgtgcaaaatgccccctaaacttgaaaatttatatttttttt---ttatccttaaaagtgactgcattatcactgaattgtggagca 15830777  T
Q  107 tattagctaagttttga 123  Q
    |||||||||||||||||    
T  15830776 tattagctaagttttga 15830760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 15830070 - 15830131
Alignment:
Q  64 cttatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttgacg 125  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  15830070 cttatccttaaaagtgactgcattatcactgaattgtggagcataatagctaagttttgacg 15830131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 7665749 - 7665693
Alignment:
Q  129 catataacgaagaggattttcgatactcttactcaaatgacaggatgacgagaaagt 185  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7665749 catataacgaagaggatttccgatactcttactcaaatgacaggatgacgagaaagt 7665693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 36207989 - 36207865
Alignment:
Q  1 ccctagagttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgt 100  Q
    ||||| ||||||||||||||||| ||||||  |  |||||||||||||||||||         ||||||||||||| | | |||||||||||||||||||    
T  36207989 ccctaaagttttgcacttatgtgcaaaatgctctctgaacttgaaaatttatat-atttttttcttatccttaaaaatgaatgcattatcactgaattgt 36207891  T
Q  101 ggagcatattagctaagttttgacgg 126  Q
    |||  |||||||||||||||||||||    
T  36207890 ggacaatattagctaagttttgacgg 36207865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 4646057 - 4646174
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    |||||||||||||| || |||||| ||| | |||||||||||||||||         |||||||||||||||  ||| |||||||| || |||| |||||    
T  4646057 agttttgcacttatttgcaaaatgccccctaaacttgaaaatttatat--attttttcttatccttaaaagtggctgaattatcaccgacttgtagagca 4646154  T
Q  107 tattagctaagttttgacgg 126  Q
    ||||||||||||||||||||    
T  4646155 tattagctaagttttgacgg 4646174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 7277938 - 7278054
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    |||||||||||||||||  ||||  ||| || ||||||||||||||||         ||||| ||||||||| ||||||||||||||||| | || ||||    
T  7277938 agttttgcacttatgtgcgaaattccccctggacttgaaaatttatat-atttttttcttattcttaaaagtgactgcattatcactgaactatgaagca 7278036  T
Q  107 tattagctaagttttgac 124  Q
    ||||| ||||||||||||    
T  7278037 tattaactaagttttgac 7278054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 3106313 - 3106360
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  3106313 agttttgcacttatgtgcaaaatgccccctgaacttgaaaatttatat 3106360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 7337941 - 7337988
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||| ||| |||||| |||||||||||||||||||||||    
T  7337941 agttttgcacttaagtgcaaaatgacccttgaacttgaaaatttatat 7337988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 38935883 - 38935930
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  38935883 agttttgcacttatgtgcaaaatgccccgtgaacttgaaaatttatat 38935930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 18060454 - 18060409
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||    
T  18060454 ttttgcacttatgtgcaaaatgtcccctaaacttgaaaatttatat 18060409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 12138649 - 12138688
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaa 46  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  12138649 agttttgcacttatgtgcaaaatgccccttgaacttgaaa 12138688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 20463621 - 20463574
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    |||||| |||||||||| ||||||  ||||||||||||||||||||||    
T  20463621 agttttacacttatgtgcaaaatgctccttgaacttgaaaatttatat 20463574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 23849113 - 23849160
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||| ||||||| ||||||||||  ||||||||||||||||||    
T  23849113 agttttgcaattatgtgcaaaatgtcccccgaacttgaaaatttatat 23849160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 35059159 - 35059112
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| |||||| |||  ||||||||||||||||||    
T  35059159 agttttgcacttatgtgcaaaatgccccccgaacttgaaaatttatat 35059112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 38937576 - 38937637
Alignment:
Q  64 cttatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttgacgg 126  Q
    ||||| ||||||||| ||||||||||||||| |||||  | |||||||| |||||||||||||    
T  38937576 cttattcttaaaagtgactgcattatcactg-attgtaaaacatattagataagttttgacgg 38937637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 41425578 - 41425624
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttata 53  Q
    ||||||||||||||||| |||||  ||| ||||||||||||||||||    
T  41425578 agttttgcacttatgtgcaaaataccccatgaacttgaaaatttata 41425624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 1090670 - 1090707
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttga 44  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  1090670 agttttgcacttatgtgcaaaatgccccttgaacttga 1090707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 21545298 - 21545253
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttat 52  Q
    ||||||||||||||||| |||||| | | |||||||||||||||||    
T  21545298 agttttgcacttatgtgcaaaatgcctcctgaacttgaaaatttat 21545253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 43207014 - 43207059
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||| ||||||| |||||||||| | |||||||||||||||||    
T  43207014 ttttgcatttatgtgcaaaatgtcccctaaacttgaaaatttatat 43207059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 44747927 - 44747874
Alignment:
Q  1 ccctagagttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||| ||||||||||||||||| |||||| || | |||||| |||||||||||    
T  44747927 ccctaaagttttgcacttatgtgcaaaatgcccatcgaacttaaaaatttatat 44747874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 22064068 - 22064116
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatg 55  Q
    ||||||||||||||||| |||||| ||| | ||||| ||||||||||||    
T  22064068 agttttgcacttatgtgcaaaatgccccctaaacttaaaaatttatatg 22064116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 35233904 - 35234021
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagcata 108  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||        ||||||||||||||| ||||||||||||||||||||||||| |||    
T  35233904 ttttgcacttatgtgcaaaatgtcccttgaacttgaaaatttatatgctttttttcttatccttaaaagtgactgcattatcactgaattgtggaggata 35234003  T
Q  109 ttagctaagttttgacgg 126  Q
    ||||||||||||| ||||    
T  35234004 ttagctaagtttttacgg 35234021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 1092176 - 1092293
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||||||||| |||||||||| |||||||||||||||||||         ||||||||||||||| |||||||||||||||||||||||||||    
T  1092176 agttttgtacttatgtgcaaaatgtcccctgaacttgaaaatttatat-atatttttcttatccttaaaagtgactgcattatcactgaattgtggagca 1092274  T
Q  107 tattagctaagttttgacgg 126  Q
    | ||||||||||||||||||    
T  1092275 t-ttagctaagttttgacgg 1092293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 24783104 - 24782988
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||||||||| |||||| ||| |||||||||||||||||||          |||||||||||||| |||||||||||||||||||||||||||    
T  24783104 agttttgtacttatgtgcaaaatgccccctgaacttgaaaatttatatatttttt---ttatccttaaaagtgactgcattatcactgaattgtggagca 24783008  T
Q  107 tattagctaagttttgacgg 126  Q
    ||||||||||||||||||||    
T  24783007 tattagctaagttttgacgg 24782988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 125
Target Start/End: Complemental strand, 50672545 - 50672432
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagcata 108  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||         ||||||||||||| | |||||||||||||||||||||||||||||    
T  50672545 ttttgcacttatgtgcaaaatgccccctgaacttgaaaatttatat---tttttacttatccttaaaatttactgcattatcactgaattgtggagcata 50672449  T
Q  109 ttagctaagttttgacg 125  Q
    ||| |||||||||||||    
T  50672448 ttaactaagttttgacg 50672432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 40066512 - 40066394
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||||||||  |||||| ||| | |||||||||||||||||         ||||||||||||||| |||||||||||||||||||||||||||    
T  40066512 agttttgtacttatgttcaaaatgccccctaaacttgaaaatttatat-atttttttcttatccttaaaagttactgcattatcactgaattgtggagca 40066414  T
Q  107 tattagctaagttttgacgg 126  Q
    ||||||||||||||||||||    
T  40066413 tattagctaagttttgacgg 40066394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 35235865 - 35235748
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||| | |||||| ||| | |||||||||||||||||         ||||||||||||||| | |||||||||||||||||||||||||    
T  35235865 agttttgcacttatgcgaaaaatgccccctaaacttgaaaatttatat-tttgttttcttatccttaaaagtgattgcattatcactgaattgtggagca 35235767  T
Q  107 tattagctaagttttgacg 125  Q
    |||||||||||||||||||    
T  35235766 tattagctaagttttgacg 35235748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 54603148 - 54603035
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||||||||| |||||| ||| |||||||||||||||||||         |||||| |||||||| |||||||||||||||||||||||||||    
T  54603148 agttttgtacttatgtgcaaaatgccccatgaacttgaaaatttatat-atttttttcttatctttaaaagtgactgcattatcactgaattgtggagca 54603050  T
Q  107 tattagctaagtttt 121  Q
    |||||||||||||||    
T  54603049 tattagctaagtttt 54603035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 54627244 - 54627305
Alignment:
Q  64 cttatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttgacg 125  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  54627244 cttatccttaaaagtgactgcattatcactgaattgtggagcatattagctaagttttgacg 54627305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 54627991 - 54627930
Alignment:
Q  64 cttatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttgacg 125  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  54627991 cttatccttaaaagtgactgcattatcactgaattgtggagcatattagctaagttttgacg 54627930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 7 - 123
Target Start/End: Complemental strand, 55482293 - 55482179
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||||||  |||||||||||||||||||         || || ||||||||| ||||||||||||| |||||||||||||    
T  55482293 agttttgcacttatgtgcaaaatgtccactgaacttgaaaatttatat--tttttttctaattcttaaaagtgactgcattatcaccgaattgtggagca 55482196  T
Q  107 tattagctaagttttga 123  Q
    |||||||||||||||||    
T  55482195 tattagctaagttttga 55482179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 32751709 - 32751591
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||||||||| |||||| | | |||| ||||||||||||||         ||||||||||||||| |||||||||||||||||||||||||||    
T  32751709 agttttgtacttatgtgcaaaatgcctcctgaatttgaaaatttatat-atttttttcttatccttaaaagtgactgcattatcactgaattgtggagca 32751611  T
Q  107 tattagctaagttttgacgg 126  Q
    ||||||||| ||||||||||    
T  32751610 tattagctatgttttgacgg 32751591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 54492881 - 54492997
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||| | | |||||||||||||||||||          |||||||||||||| |||||||||||| ||||||||||||||    
T  54492881 agttttgcacttatgtgcaaaatgccgcctgaacttgaaaatttatatttttttg---ttatccttaaaagtgactgcattatcattgaattgtggagca 54492977  T
Q  107 tattagctaagttttgacgg 126  Q
    |||||| |||||||||||||    
T  54492978 tattagttaagttttgacgg 54492997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 24782251 - 24782356
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||             ||||||||||| | ||||||||||||||||||| |||||    
T  24782251 agttttgcacttatgtgcaaaatgtcccttaaacttgaaaatttatat-------------tccttaaaagtgattgcattatcactgaattgttgagca 24782337  T
Q  107 tattagctaagttttgacg 125  Q
    |||||||||||||||||||    
T  24782338 tattagctaagttttgacg 24782356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 32750904 - 32750966
Alignment:
Q  64 cttatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttgacgg 126  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  32750904 cttatccttaaaagtgactgcattatcactgaattgtagagcatattagctaagttttgacgg 32750966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 40065651 - 40065768
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||| ||| | |||||||||||||||||         ||||||||||||||| | |||||||||| ||||||||||| ||    
T  40065651 agttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat-tttgttttcttatccttaaaagtgattgcattatcattgaattgtggaaca 40065749  T
Q  107 tattagctaagttttgacg 125  Q
    |||||||||||||||||||    
T  40065750 tattagctaagttttgacg 40065768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 20411147 - 20411031
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagcata 108  Q
    ||||| ||||||||| |||||| ||| |||| ||||||||||||||         ||||||||||||||| |||||||||||||||||||||  ||||||    
T  20411147 ttttgtacttatgtgcaaaatgccccctgaatttgaaaatttatat-atttttttcttatccttaaaagtgactgcattatcactgaattgtaaagcata 20411049  T
Q  109 ttagctaagttttgacgg 126  Q
    ||||||||||||||||||    
T  20411048 ttagctaagttttgacgg 20411031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 123
Target Start/End: Original strand, 20819384 - 20819499
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||||||||| |||||| ||| ||||||| |||||||||||         ||||| ||| ||||| |||||||||||||||||||||||||||    
T  20819384 agttttgtacttatgtgcaaaatgccccctgaacttaaaaatttatat-atttttttcttatgctttaaagtgactgcattatcactgaattgtggagca 20819482  T
Q  107 tattagctaagttttga 123  Q
    |||||||||||||||||    
T  20819483 tattagctaagttttga 20819499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 123
Target Start/End: Original strand, 35235005 - 35235120
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||||||||  |||||| ||| |||||||||||||||||||          |||||||||||||| |||||||||||||||||||||||||||    
T  35235005 agttttgtacttatgtacaaaatgccccctgaacttgaaaatttatatattttttta-ttatccttaaaagtgactgcattatcactgaattgtggagca 35235103  T
Q  107 tattagctaagttttga 123  Q
    ||||||||| |||||||    
T  35235104 tattagctatgttttga 35235120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 46651100 - 46650981
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcact-gcattatcactgaattgtggagc 105  Q
    ||||||| ||||||||| |||||| | | ||||||| |||||||||||         ||||||||||||||| ||| |||||||||||||||||||||||    
T  46651100 agttttgtacttatgtgcaaaatggctcctgaactttaaaatttatat-atttttttcttatccttaaaagtgacttgcattatcactgaattgtggagc 46651002  T
Q  106 atattagctaagttttgacgg 126  Q
    |||||||||||||||||||||    
T  46651001 atattagctaagttttgacgg 46650981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 7 - 122
Target Start/End: Original strand, 40791516 - 40791630
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||||         ||||||||||||||| |||||||| |||||| |||||| ||||    
T  40791516 agttttgcacttatgtgcaaaatgccccctgaacttgaaaatttatatattttttttcttatccttaaaagtgactgcattgtcactg-attgtgaagca 40791614  T
Q  107 tattagctaagttttg 122  Q
    ||||| ||||||||||    
T  40791615 tattaactaagttttg 40791630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 54602290 - 54602405
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||| ||| | |||||||||||||||||         ||||||||||||||| | ||||||||||||||  |||||||||    
T  54602290 agttttgcacttatgtgcaaaatgccccataaacttgaaaatttatat-tttgttttcttatccttaaaagtgattgcattatcactga--tgtggagca 54602386  T
Q  107 tattagctaagttttgacg 125  Q
    |||||||||||||||||||    
T  54602387 tattagctaagttttgacg 54602405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 20820191 - 20820133
Alignment:
Q  64 cttatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttg 122  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  20820191 cttatccttaaaagtgactgcattatcactgaattgtggaacatattagctaagttttg 20820133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 126
Target Start/End: Complemental strand, 35234682 - 35234620
Alignment:
Q  64 cttatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttgacgg 126  Q
    ||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||    
T  35234682 cttatccttaaaagtgactgcattatcactgaattgtgcaacatattagctaagttttgacgg 35234620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 31584851 - 31584963
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagcata 108  Q
    ||||||||||||||| |||||| ||| ||| |||||||||||||||         ||||||||||||||| |||||||| |||||| |||||| ||||||    
T  31584851 ttttgcacttatgtgcaaaatgccccctgagcttgaaaatttatattttttttttcttatccttaaaagtgactgcattgtcactg-attgtgaagcata 31584949  T
Q  109 ttagctaagttttg 122  Q
    ||||||||||||||    
T  31584950 ttagctaagttttg 31584963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 55481502 - 55481549
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||    
T  55481502 agttttgcacttatgtgcaaaatgtcccctgaacttgaaaatttatat 55481549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 126
Target Start/End: Complemental strand, 40010048 - 40009986
Alignment:
Q  64 cttatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttgacgg 126  Q
    |||||||||||||||  ||||||||||||||||||||  | ||||||||||| ||||||||||    
T  40010048 cttatccttaaaagtggctgcattatcactgaattgtaaaacatattagctatgttttgacgg 40009986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 33128582 - 33128623
Alignment:
Q  13 gcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  33128582 gcacttatgtgcaaaatgtcccttgaacttgaaaatttatat 33128623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 44405314 - 44405261
Alignment:
Q  1 ccctagagttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||| ||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  44405314 ccctaaagttttgcacttatgtgcaaaatgtcccctgaacttaaaaatttatat 44405261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 8015563 - 8015516
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||  ||| || |||||||||||||||||||||||    
T  8015563 agttttgcacttatgtacaaattgccccttgaacttgaaaatttatat 8015516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 29588995 - 29588949
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| ||||||| || |||||||||||||||||||    
T  29588995 agttttgcacttatgtgcaaaatgt-ccgtgaacttgaaaatttatat 29588949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 14899387 - 14899342
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  14899387 ttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 14899342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 33981560 - 33981605
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||||||| | ||||||||||| |||||    
T  33981560 ttttgcacttatgtgcaaaatgtcccctaaacttgaaaatatatat 33981605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 38667280 - 38667325
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  38667280 ttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 38667325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 39285080 - 39285125
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  39285080 ttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 39285125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 40278272 - 40278317
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  40278272 ttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 40278317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42248921 - 42248868
Alignment:
Q  1 ccctagagttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||| ||||||||||||||||| |||||| |||  |||||| |||||||||||    
T  42248921 ccctaaagttttgcacttatgtgcaaaatgccccccgaacttaaaaatttatat 42248868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 43914646 - 43914601
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  43914646 ttttgcacttatgtgcaaaatgccccataaacttgaaaatttatat 43914601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 49316202 - 49316247
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  49316202 ttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 49316247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 17647443 - 17647566
Alignment:
Q  1 ccctagagttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgt 100  Q
    ||||| ||||||||||||||||| |||||| ||| |||||||||||||||||||         ||||||||||||||| |||||||||||||||||||||    
T  17647443 ccctaaagttttgcacttatgtgcaaaatgccccctgaacttgaaaatttatat-atttttttcttatccttaaaagtgactgcattatcactgaattgt 17647541  T
Q  101 ggagcatattagctaagttttgacg 125  Q
    |||||||||||||||||||||||||    
T  17647542 ggagcatattagctaagttttgacg 17647566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 6915373 - 6915256
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||| ||| |||||||||||||| ||||         ||||||||||||||| |||||||||||||| |||||| |||||    
T  6915373 agttttgcacttatgtgcaaaatgccccctgaacttgaaaattaatat--tttttttcttatccttaaaagtgactgcattatcacttaattgtagagca 6915276  T
Q  107 tattagctaagttttgacgg 126  Q
    ||||||||||||||||||||    
T  6915275 tattagctaagttttgacgg 6915256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 26359801 - 26359683
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||| ||||| |||||| ||| |||||||||||||||||||         ||||||||||||||| |||||||||||||||||||||||| ||    
T  26359801 agttttgtactcatgtgcaaaatgccccatgaacttgaaaatttatat-atttttttcttatccttaaaagtgactgcattatcactgaattgtggaaca 26359703  T
Q  107 tattagctaagttttgacgg 126  Q
    ||||||||||||||||||||    
T  26359702 tattagctaagttttgacgg 26359683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 126
Target Start/End: Original strand, 5574136 - 5574245
Alignment:
Q  15 acttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagcatattagct 114  Q
    ||||||||| |||||| |||||||||||||||||||||||         ||||||||||||||| ||||||||| |||||||||||||||||| ||||||    
T  5574136 acttatgtgcaaaatgccccttgaacttgaaaatttatat-atttttttcttatccttaaaagtgactgcattaccactgaattgtggagcat-ttagct 5574233  T
Q  115 aagttttgacgg 126  Q
    ||||||||||||    
T  5574234 aagttttgacgg 5574245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 6914284 - 6914403
Alignment:
Q  2 cctagagttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtg 101  Q
    |||| |||||||| |||||||| |||||||| |||||||||||||||||||||         ||||||||||||| | |||||||||||||| ||||||     
T  6914284 cctaaagttttgcgcttatgtgcaaaatgtctcttgaacttgaaaatttatat---ttttttcttatccttaaaa-tgactgcattatcactcaattgta 6914379  T
Q  102 gagcatattagctaagttttgacg 125  Q
    ||||||||||||||||||||||||    
T  6914380 gagcatattagctaagttttgacg 6914403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 114
Target Start/End: Complemental strand, 8505950 - 8505843
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||||||||| |||||| ||  |||||||||||||||||||         ||||||||||||||| |||||||||||||||||||||||||||    
T  8505950 agttttgtacttatgtgcaaaatgccctctgaacttgaaaatttatatattttttttcttatccttaaaagtgactgcattatcactgaattgtggagca 8505851  T
Q  107 tattagct 114  Q
    ||||||||    
T  8505850 tattagct 8505843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 5574986 - 5574869
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    |||||||||||||| || |||||| ||| | |||||||||||||||||         ||||||||||||||| | || ||||||||||||||||||||||    
T  5574986 agttttgcacttatatgcaaaatgccccataaacttgaaaatttatat-tttgttttcttatccttaaaagtgattgtattatcactgaattgtggagca 5574888  T
Q  107 tattagctaagttttgacg 125  Q
    |||||||||||||||||||    
T  5574887 tattagctaagttttgacg 5574869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 123
Target Start/End: Complemental strand, 17648309 - 17648194
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||||||||| |||||| | | ||||||| |||||||||||         ||||||||||||||| |||||||||||||| ||||||||||||    
T  17648309 agttttgtacttatgtgcaaaatgcctcctgaacttaaaaatttatat-atttttttcttatccttaaaagtgactgcattatcactaaattgtggagca 17648211  T
Q  107 tattagctaagttttga 123  Q
    |||||||||||||||||    
T  17648210 tattagctaagttttga 17648194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 24087432 - 24087314
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| | ||||||| |||||||| | ||||||||||||||| |||         ||||||||||||| | |||||||||||||||||||||| ||||    
T  24087432 agttttgtatttatgtgcaaaatgtcacatgaacttgaaaatttttat-atttttttcttatccttaaaattgactgcattatcactgaattgtgaagca 24087334  T
Q  107 tattagctaagttttgacgg 126  Q
    ||||||||||||||||||||    
T  24087333 tattagctaagttttgacgg 24087314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 26359302 - 26359419
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||| ||||||| |||||||||| | ||||| |||||||||||         ||||||||||||||| | ||||||||||||||||||||||| |    
T  26359302 agttttgcatttatgtgcaaaatgtcccctaaacttaaaaatttatat-tttgttttcttatccttaaaagtgattgcattatcactgaattgtggagta 26359400  T
Q  107 tattagctaagttttgacg 125  Q
    ||||| |||||||||||||    
T  26359401 tattaactaagttttgacg 26359419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 122
Target Start/End: Complemental strand, 19293175 - 19293060
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnn-cttatccttaaaagtcactgcattatcactgaattgtggagc 105  Q
    ||||||||||||||||| ||||| |||| |||||||||||||||||||          ||||||||||||||| |||||||| |||||| |||||| |||    
T  19293175 agttttgcacttatgtgcaaaatatcccctgaacttgaaaatttatatatttttttttcttatccttaaaagtgactgcattgtcactg-attgtgaagc 19293077  T
Q  106 atattagctaagttttg 122  Q
    |||||||||||||||||    
T  19293076 atattagctaagttttg 19293060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 37895910 - 37895847
Alignment:
Q  64 cttatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttgacgga 127  Q
    ||||||||||||| | |||||||||||||| |||||||||||||||||  ||||||||||||||    
T  37895910 cttatccttaaaaatgactgcattatcacttaattgtggagcatattaattaagttttgacgga 37895847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 5577315 - 5577205
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagcata 108  Q
    ||||||||||||||| |||||| ||| ||||| |||||||||||||         ||||||||||||||| |||||||| |||||| |||||| ||||||    
T  5577315 ttttgcacttatgtgcaaaatgccccctgaacatgaaaatttatat--tttttttcttatccttaaaagtgactgcattgtcactg-attgtgaagcata 5577219  T
Q  109 ttagctaagttttg 122  Q
    ||| ||||||||||    
T  5577218 ttaactaagttttg 5577205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 6809423 - 6809376
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||    
T  6809423 agttttgcacttatgtgcaaaatgccccttgaacttgaaaatttatat 6809376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 20731022 - 20731069
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||||||    
T  20731022 agttttgcacttatgtgcaaaatgccccttgcacttgaaaatttatat 20731069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 34217245 - 34217198
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| ||||||||| |||||||| |||||||||||    
T  34217245 agttttgcacttatgtgcaaaatgtccgttgaacttaaaaatttatat 34217198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 38424900 - 38424853
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  38424900 agttttgcacttatgtgcaaaatgccccatgaacttgaaaatttatat 38424853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 14197934 - 14197888
Alignment:
Q  8 gttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||| || |||||| |||||||||||||||||||||||    
T  14197934 gttttgcacttatatgcaaaatgccccttgaacttgaaaatttatat 14197888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 25751872 - 25751917
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||    
T  25751872 ttttgcacttatgtgcaaaatgtcccctaaacttgaaaatttatat 25751917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 38090493 - 38090538
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||    
T  38090493 ttttgcacttatgtgcaaaatgtcccataaacttgaaaatttatat 38090538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 2301346 - 2301299
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    |||||| |||||||||| |||||| ||||| |||||||||||||||||    
T  2301346 agttttacacttatgtgcaaaatgcccctttaacttgaaaatttatat 2301299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 7950952 - 7950999
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||| ||||| |||||  |||||||||||||||||||||||    
T  7950952 agttttgcactaatgtgcaaaataccccttgaacttgaaaatttatat 7950999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 38424265 - 38424312
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| ||||| ||||| |||||| |||||||||||    
T  38424265 agttttgcacttatgtgcaaaatatccctcgaacttaaaaatttatat 38424312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 38977723 - 38977762
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaa 46  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  38977723 agttttgcacttatgtgcaaaatgccccttgaacttgaaa 38977762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9587668 - 9587722
Alignment:
Q  1 ccctagagttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatg 55  Q
    ||||| ||||||||| |||| || |||||| ||| ||||||||||||||||||||    
T  9587668 ccctaaagttttgcatttatatgcaaaatgccccctgaacttgaaaatttatatg 9587722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 746506 - 746551
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  746506 ttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 746551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 2745440 - 2745395
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||| | ||||| |||||||||||||||||    
T  2745440 ttttgcacttatgtgcaaaacgccccttaaacttgaaaatttatat 2745395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 27500863 - 27500818
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  27500863 ttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 27500818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 29235619 - 29235664
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  29235619 ttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 29235664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 29836020 - 29835975
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||||||| | || ||||||||||||||    
T  29836020 ttttgcacttatgtgcaaaatgtcccataaatttgaaaatttatat 29835975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 36778357 - 36778402
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    |||||||||||| || |||||||||||  |||||||||||||||||    
T  36778357 ttttgcacttatatgcaaaatgtccctcaaacttgaaaatttatat 36778402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 11099915 - 11099798
Alignment:
Q  8 gttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagcat 107  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||         ||||||||||||||| |||||||||||||| |||||||||||||    
T  11099915 gttttgtacttatgtgtaaaatgtcccctgaacttgaaaatttatat-atttttttcttatccttaaaagtgactgcattatcactaaattgtggagcat 11099817  T
Q  108 attagctaagttttgacgg 126  Q
    |||||||||||||||||||    
T  11099816 attagctaagttttgacgg 11099798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 28538216 - 28538098
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||||||||| |||||||||  |||||||||||| ||||||         || |||||||||||| |||||||||||||| ||||||||||||    
T  28538216 agttttgtacttatgtgcaaaatgtcctctgaacttgaaaaattatatatttttttcct-atccttaaaagtgactgcattatcactaaattgtggagca 28538118  T
Q  107 tattagctaagttttgacgg 126  Q
    ||||||||||||||||||||    
T  28538117 tattagctaagttttgacgg 28538098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 28537688 - 28537805
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||| ||| | |||||||||||||||||         ||||||||||||||| | || |||||||||||||| |||||||    
T  28537688 agttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat-tttgttttcttatccttaaaagtgattgtattatcactgaattttggagca 28537786  T
Q  107 tattagctaagttttgacg 125  Q
    |||||||||||||||||||    
T  28537787 tattagctaagttttgacg 28537805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 1563114 - 1563176
Alignment:
Q  64 cttatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttgacgg 126  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||    
T  1563114 cttatccttaaaagtgactgcattatcactgaattgtggagcatattagccaagttttaacgg 1563176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 1563923 - 1563809
Alignment:
Q  8 gttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagcat 107  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||         |||||| |||||||| | ||||||   |||||||||||||||||    
T  1563923 gttttgcacttatgtgcaaagtgtcccttgaacttgaaaatttatat-ttttttttcttatctttaaaagtgattgcatt---actgaattgtggagcat 1563828  T
Q  108 attagctaagttttgacgg 126  Q
    ||||| |||||||||||||    
T  1563827 attagataagttttgacgg 1563809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 122
Target Start/End: Complemental strand, 23075269 - 23075157
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||||         ||||||||||||||| | |||||| |||||| |||||| ||||    
T  23075269 agttttgcacttatgtgcaaaatgccccctgaacttgaaaatttatat--ttttattcttatccttaaaagtgattgcattgtcactg-attgtgaagca 23075173  T
Q  107 tattagctaagttttg 122  Q
    ||||||||||||||||    
T  23075172 tattagctaagttttg 23075157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 11099094 - 11099211
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| |||||| || |||||||||| | |||||||||||||||||         ||||||||||||||| | |||||||||  ||||||||||||||    
T  11099094 agttttgtacttatttgcaaaatgtcccctaaacttgaaaatttatat-tttgttttcttatccttaaaagtgattgcattatcggtgaattgtggagca 11099192  T
Q  107 tattagctaagttttgacg 125  Q
     ||||||||||||||||||    
T  11099193 aattagctaagttttgacg 11099211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 25404242 - 25404289
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| |||||||||| | ||||| |||||||||||    
T  25404242 agttttgcacttatgtgcaaaatgtcccctaaacttaaaaatttatat 25404289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 8590625 - 8590580
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||  |||||||||||||||||||    
T  8590625 ttttgcacttatgtgcaaaatgcccgctgaacttgaaaatttatat 8590580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 16894579 - 16894624
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  16894579 ttttgcacttatgtgcaaaatgccccataaacttgaaaatttatat 16894624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 32597155 - 32597110
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| ||||||  |||| |||||||||||||||||    
T  32597155 ttttgcacttatgtgcaaaatgctccttaaacttgaaaatttatat 32597110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 5e-31; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 25977 - 26100
Alignment:
Q  2 cctagagttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtg 101  Q
    |||| ||||||| ||||||||| |||||| ||| |||||||||||||||||||         ||||||||||||||| ||||||||||||||||||||||    
T  25977 cctaaagttttgtacttatgtgcaaaatgccccctgaacttgaaaatttatat-atttttttcttatccttaaaagtgactgcattatcactgaattgtg 26075  T
Q  102 gagcatattagctaagttttgacgg 126  Q
    |||||||||||||||||||||||||    
T  26076 gagcatattagctaagttttgacgg 26100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 25630340 - 25630456
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||         ||||||||||||||| |||||||||||| ||||||||||||||    
T  25630340 agttttgcacttatgtgcaaaatgtcccctgaacttgaaaatttatat---ttttttcttatccttaaaagtgactgcattatcattgaattgtggagca 25630436  T
Q  107 tattagctaagttttgacgg 126  Q
    ||||| ||||||||||||||    
T  25630437 tattaactaagttttgacgg 25630456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 44308270 - 44308388
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||||||||| |||||| |||||||||||||||||||||||         ||||||||||||||| | |||||||||||||||||||||||||    
T  44308270 agttttgtacttatgtgcaaaatgccccttgaacttgaaaatttatat-atttttttcttatccttaaaagtgattgcattatcactgaattgtggagca 44308368  T
Q  107 tattagctaagttttgacgg 126  Q
    ||||||||||||||||||||    
T  44308369 tattagctaagttttgacgg 44308388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 123
Target Start/End: Complemental strand, 26846 - 26731
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||||||| | |||||||||||||||||         ||||||||||||||| | |||||||||||||||||||||||||    
T  26846 agttttgcacttatgtgcaaaatgtcccctaaacttgaaaatttatat-tttgttttcttatccttaaaagtgattgcattatcactgaattgtggagca 26748  T
Q  107 tattagctaagttttga 123  Q
    |||||||||||||||||    
T  26747 tattagctaagttttga 26731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 25631189 - 25631075
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagcata 108  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||         ||||||||||||||| ||||||||||||||||||| | |||||||    
T  25631189 ttttgcacttatgtgcaaaatgccccctgaacttgaaaatttatat---ttttttcttatccttaaaagttactgcattatcactgaattctagagcata 25631093  T
Q  109 ttagctaagttttgacgg 126  Q
    ||||||||||||||||||    
T  25631092 ttagctaagttttgacgg 25631075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 15565547 - 15565429
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||||||||| |||||||||| | ||||| |||||||||||         ||||||||||||||| ||||||||||||||||||||| |||||    
T  15565547 agttttgtacttatgtgcaaaatgtcccctcaacttaaaaatttatat-agttttttcttatccttaaaagtgactgcattatcactgaattgtagagca 15565449  T
Q  107 tattagctaagttttgacgg 126  Q
    ||||||||||||||||||||    
T  15565448 tattagctaagttttgacgg 15565429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 125
Target Start/End: Complemental strand, 9879187 - 9879072
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagcata 108  Q
    ||||||||||||||| |||||| ||| | ||||| |||||||||||         ||||||||||||||| |||||||||||||||||||||||||||||    
T  9879187 ttttgcacttatgtgcaaaatgccccctaaacttaaaaatttatat-atttttttcttatccttaaaagtgactgcattatcactgaattgtggagcata 9879089  T
Q  109 ttagctaagttttgacg 125  Q
    |||||||| ||||||||    
T  9879088 ttagctaaattttgacg 9879072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 122
Target Start/End: Complemental strand, 12503109 - 12502997
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||||||||||   | |||||||||||||||||||         ||||||||||||| | |||||||||||| ||||||||||||||    
T  12503109 agttttgcacttatgtgtaaaatgcatcctgaacttgaaaatttatat---ttttttcttatccttaaaaatgactgcattatcagtgaattgtggagca 12503013  T
Q  107 tattagctaagttttg 122  Q
    ||||||||||||||||    
T  12503012 tattagctaagttttg 12502997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 25094294 - 25094411
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||| ||| | ||||| |||||||||||         ||||||||||||||| | |||||||||||||||||||||||||    
T  25094294 agttttgcacttatgtgcaaaatgccccctaaacttaaaaatttatat-tttgttttcttatccttaaaagtgattgcattatcactgaattgtggagca 25094392  T
Q  107 tattagctaagttttgacg 125  Q
    ||||| |||||||||||||    
T  25094393 tattaactaagttttgacg 25094411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 15730713 - 15730774
Alignment:
Q  64 cttatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttgacgg 126  Q
    ||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||    
T  15730713 cttatccttaaaagtgactgcattatcactg-attgtgaagcatattagctaagttttgacgg 15730774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 20832733 - 20832616
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||||||||| |||||  ||| | |||||||||||||||||         ||||||||||||||| | || |||||||||||||| |||||||    
T  20832733 agttttgtacttatgtgcaaaataccccataaacttgaaaatttatat-tttgttttcttatccttaaaagtgattgtattatcactgaattatggagca 20832635  T
Q  107 tattagctaagttttgacg 125  Q
    |||||||||||||||||||    
T  20832634 tattagctaagttttgacg 20832616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 20831949 - 20831994
Alignment:
Q  81 ctgcattatcactgaattgtggagcatattagctaagttttgacgg 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  20831949 ctgcattatcactgaattgtggagcatattagctaagttttgacgg 20831994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 12502312 - 12502359
Alignment:
Q  70 cttaaaagtcactgcattatcactgaattgtggagcatattagctaag 117  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  12502312 cttaaaagtgactgcattatcactgaattgtagagcatattagctaag 12502359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 15564740 - 15564799
Alignment:
Q  64 cttatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttga 123  Q
    ||||||||||||||| | |  ||||||||||||||||||| |||||||||||||||||||    
T  15564740 cttatccttaaaagtgattatattatcactgaattgtggaacatattagctaagttttga 15564799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 37746462 - 37746500
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaa 45  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  37746462 agttttgcacttatgtgcaaaatgtcccttgaacttgaa 37746500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 6869218 - 6869258
Alignment:
Q  86 ttatcactgaattgtggagcatattagctaagttttgacgg 126  Q
    |||||||||||||||||||||| |||||||| |||||||||    
T  6869218 ttatcactgaattgtggagcatgttagctaaattttgacgg 6869258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 14024183 - 14024127
Alignment:
Q  65 ttatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagtttt 121  Q
    |||||||||||| | | | |||||||||| |||||||||| ||||||||||||||||    
T  14024183 ttatccttaaaaatgattacattatcacttaattgtggagaatattagctaagtttt 14024127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 3416830 - 3416877
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| ||||||| ||  ||||||||||||||||||    
T  3416830 agttttgcacttatgtgcaaaatgttccccgaacttgaaaatttatat 3416877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 26431510 - 26431463
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||||||||||||||   ||||| |||||||||||    
T  26431510 agttttgcacttatgtgtaaaatgtcccacaaacttaaaaatttatat 26431463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 31820511 - 31820464
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    |||||| |||||||||| |||||||||| ||||||| |||||||||||    
T  31820511 agttttccacttatgtgcaaaatgtcccctgaactttaaaatttatat 31820464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 9263887 - 9263841
Alignment:
Q  8 gttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    |||||||||||||||| ||||||  | ||||||||||||||||||||    
T  9263887 gttttgcacttatgtgcaaaatgctctttgaacttgaaaatttatat 9263841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 31819881 - 31819919
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaa 45  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  31819881 agttttgcacttatgtgcaaaatgccccttgaacttgaa 31819919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 39864143 - 39864105
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaa 45  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  39864143 agttttgcacttatgtgcaaaatgccccttgaacttgaa 39864105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 3177949 - 3177994
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  3177949 ttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 3177994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 12764252 - 12764297
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  12764252 ttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 12764297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 39584531 - 39584486
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    |||||||||||||||  ||||||||| | |||||||||||||||||    
T  39584531 ttttgcacttatgtgctaaatgtcccctaaacttgaaaatttatat 39584486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 5e-31; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 7 - 123
Target Start/End: Complemental strand, 21247470 - 21247355
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||||         ||||||||||||||| |||||||||||||||||||||||||||    
T  21247470 agttttgcacttatgtgcaaaatgccccatgaacttgaaaatttatat-atttttttcttatccttaaaagtgactgcattatcactgaattgtggagca 21247372  T
Q  107 tattagctaagttttga 123  Q
    |||||||||||||||||    
T  21247371 tattagctaagttttga 21247355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 39365001 - 39365120
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||||||||| |||||| | | |||||||||||||||||||         ||||||||||||||| |||||||||||||||||||||||||||    
T  39365001 agttttgtacttatgtgcaaaatgcctcatgaacttgaaaatttatatattttttttcttatccttaaaagtgactgcattatcactgaattgtggagca 39365100  T
Q  107 tattagctaagttttgacgg 126  Q
    ||||||||||||||||||||    
T  39365101 tattagctaagttttgacgg 39365120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 40315518 - 40315399
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||||||||| |||||| ||| |||||||||||||||||||         ||||||||||||||| |||||||||||||| ||||||||||||    
T  40315518 agttttgtacttatgtgcaaaatgccccctgaacttgaaaatttatattttttttttcttatccttaaaagtgactgcattatcacttaattgtggagca 40315419  T
Q  107 tattagctaagttttgacgg 126  Q
    ||||||||||||||||||||    
T  40315418 tattagctaagttttgacgg 40315399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 1799725 - 1799607
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||||||||| |||||| ||| |||||||||||||||||||         ||||||||||||||| | |||||||||||||||||||||||||    
T  1799725 agttttgtacttatgtgcaaaatgccccctgaacttgaaaatttatat-atttttttcttatccttaaaagtgagtgcattatcactgaattgtggagca 1799627  T
Q  107 tattagctaagttttgacgg 126  Q
    ||||||||||||||||||||    
T  1799626 tattagctaagttttgacgg 1799607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 23703768 - 23703651
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||| | | |||||||||||||||||||         ||||||||||||||| | |||||||||||||||||||||||||    
T  23703768 agttttgcacttatgtgcaaaatgcctcctgaacttgaaaatttatat--attttttcttatccttaaaagtgattgcattatcactgaattgtggagca 23703671  T
Q  107 tattagctaagttttgacgg 126  Q
    ||||||||||||||||||||    
T  23703670 tattagctaagttttgacgg 23703651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 29487447 - 29487566
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||||||| |||||||||||| |||||          ||||||||||||||| |||||||||||||| ||||||||||||    
T  29487447 agttttgcacttatgtgcaaaatgtcccctgaacttgaaaaattataaaaaaaaattcttatccttaaaagtgactgcattatcacttaattgtggagca 29487546  T
Q  107 tattagctaagttttgacgg 126  Q
    | ||||||||||||||||||    
T  29487547 tgttagctaagttttgacgg 29487566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 44431347 - 44431466
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||||||||| |||||  ||| |||||||||||||||||||         |||||| |||||||| |||||||||||||||||||||||||||    
T  44431347 agttttgtacttatgtgcaaaataccccatgaacttgaaaatttatattttttttttcttatctttaaaagtgactgcattatcactgaattgtggagca 44431446  T
Q  107 tattagctaagttttgacgg 126  Q
    ||||||||||||||||||||    
T  44431447 tattagctaagttttgacgg 44431466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 25376895 - 25377010
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||| ||||||| |||||| | |||||||||||||||||||||         ||||||||||||||| |||||||||||||| ||||||||||||    
T  25376895 agttttgcaattatgtgcaaaatgcctcttgaacttgaaaatttatat---ttttttcttatccttaaaagtgactgcattatcactaaattgtggagca 25376991  T
Q  107 tattagctaagttttgacg 125  Q
    |||||||||||||||||||    
T  25376992 tattagctaagttttgacg 25377010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 46294603 - 46294720
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||| ||| | |||||||||||||||||         ||||||||||||||| | |||||||||||||||||||||||||    
T  46294603 agttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat-tttgttttcttatccttaaaagtgattgcattatcactgaattgtggagca 46294701  T
Q  107 tattagctaagttttgacg 125  Q
    |||||||||||||||||||    
T  46294702 tattagctaagttttgacg 46294720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 16835370 - 16835270
Alignment:
Q  25 aaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttgac 124  Q
    |||||||||||||||||| |||||||||||         ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16835370 aaaatgtcccttgaacttaaaaatttatat-atttttttcttatccttaaaagtgactgcattatcactgaattgtggagcatattagctaagttttgac 16835272  T
Q  125 gg 126  Q
    ||    
T  16835271 gg 16835270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 16798183 - 16798064
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    |||||| |||||||||| ||||||||||  ||||||||||||||||||         || |||||||||||| ||||||||||||| ||||||||||| |    
T  16798183 agtttttcacttatgtgcaaaatgtccccagaacttgaaaatttatattttttttttctgatccttaaaagtgactgcattatcaccgaattgtggagta 16798084  T
Q  107 tattagctaagttttgacgg 126  Q
    ||||||||||||||||||||    
T  16798083 tattagctaagttttgacgg 16798064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 16834529 - 16834644
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||| ||| | |||||||||||||||||         ||||||||||||||| | |||||||||||||||||||||||||    
T  16834529 agttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat---tatgttcttatccttaaaagtgattgcattatcactgaattgtggagca 16834625  T
Q  107 tattagctaagttttgacg 125  Q
    ||||| |||||||||||||    
T  16834626 tattaactaagttttgacg 16834644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 44432210 - 44432093
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||| ||| | |||||||||||||||||         ||| ||||||||||| | |||||||||||||||||||||||||    
T  44432210 agttttgcacttatgtgaaaaatgccccctaaacttgaaaatttatat-tttgttttcttctccttaaaagtgattgcattatcactgaattgtggagca 44432112  T
Q  107 tattagctaagttttgacg 125  Q
    |||||||||||||||||||    
T  44432111 tattagctaagttttgacg 44432093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 46295448 - 46295331
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||||||||| |||||| ||| || ||||||||||||||||         ||||||||||||||| ||||||||||||||||||||| |||||    
T  46295448 agttttgtacttatgtgcaaaatgccccctggacttgaaaatttatat-atttttttcttatccttaaaagtgactgcattatcactgaattgtagagca 46295350  T
Q  107 tattagctaagttttgacg 125  Q
    |||||||||||||||||||    
T  46295349 tattagctaagttttgacg 46295331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 1798928 - 1799045
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||  ||| | || ||||||||||||||         ||||||||||||||| | |||||||||||||||||||||||||    
T  1798928 agttttgcacttatgtgcaaaataccccataaatttgaaaatttatat-tttgttttcttatccttaaaagtgattgcattatcactgaattgtggagca 1799026  T
Q  107 tattagctaagttttgacg 125  Q
    |||||||||||||||||||    
T  1799027 tattagctaagttttgacg 1799045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 7 - 136
Target Start/End: Complemental strand, 48731554 - 48731426
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnn-cttatccttaaaagtcactgcattatcactgaattgtggagc 105  Q
    ||||||||||||||| | |||||| ||  |||||||||||||||||||          ||||||||||||||| |||||||||||| |||||||||||||    
T  48731554 agttttgcacttatgcgcaaaatgccctctgaacttgaaaatttatatattttttttgcttatccttaaaagtgactgcattatcattgaattgtggagc 48731455  T
Q  106 atattagctaagttttgacggagcatataac 136  Q
    ||||||||| |||||||||  ||||||||||    
T  48731454 atattagcttagttttgac--agcatataac 48731426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 11202084 - 11202031
Alignment:
Q  71 ttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttgac 124  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11202084 ttaaaagtgactgcattatcactgaattgtggagcatattagctaagttttgac 11202031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 27234630 - 27234692
Alignment:
Q  64 cttatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttgacgg 126  Q
    ||||||||||||||| ||||| |||||||||||||||||| ||||||| ||||||||||||||    
T  27234630 cttatccttaaaagtgactgccttatcactgaattgtggaacatattaactaagttttgacgg 27234692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 19076269 - 19076208
Alignment:
Q  64 cttatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttgacg 125  Q
    ||||||||||||||| | || ||||||||||||||||||| |||||||||||||||||||||    
T  19076269 cttatccttaaaagtgattgtattatcactgaattgtggaacatattagctaagttttgacg 19076208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 19124159 - 19124098
Alignment:
Q  64 cttatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttgacg 125  Q
    ||||||||||||||| | || ||||||||||||||||||| |||||||||||||||||||||    
T  19124159 cttatccttaaaagtgattgtattatcactgaattgtggaacatattagctaagttttgacg 19124098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 42774944 - 42774999
Alignment:
Q  71 ttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttgacgg 126  Q
    |||||||  |||| ||||||||||||||||||||||||||||||||||||||||||    
T  42774944 ttaaaagcgactgaattatcactgaattgtggagcatattagctaagttttgacgg 42774999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 45141627 - 45141746
Alignment:
Q  1 ccctagagttttgcacttatgtgtaaaatgtcccttgaacttg-aaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattg 99  Q
    |||| |||||||||||||||||| |||||| ||| |||||||| |||||||||||         ||||||||||||||| |||||||| |||||| ||||    
T  45141627 ccctggagttttgcacttatgtgcaaaatgccccctgaacttggaaaatttatat--tttttttcttatccttaaaagtgactgcattgtcactg-attg 45141723  T
Q  100 tggagcatattagctaagttttg 122  Q
    |  ||||||||||||||||||||    
T  45141724 taaagcatattagctaagttttg 45141746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 40116888 - 40116841
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  40116888 agttttgcacttatgtgcaaaatgtccctcgaacttgaaaatttatat 40116841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 21246615 - 21246730
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| | |||| | | | |||||||||||||||||         ||||||||||||| | | ||| |||||| ||||||||||||||    
T  21246615 agttttgcacttatgtgcagaatgcctcataaacttgaaaatttatat--ttgttttcttatccttaaaaatgattgc-ttatcaatgaattgtggagca 21246711  T
Q  107 tattagctaagttttgacg 125  Q
    |||||||||||||||||||    
T  21246712 tattagctaagttttgacg 21246730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 23703242 - 23703302
Alignment:
Q  64 cttatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttgacg 125  Q
    |||||||||||| || | || ||||||||||||||||| |||||||||||||||||||||||    
T  23703242 cttatccttaaa-gtgattgtattatcactgaattgtgtagcatattagctaagttttgacg 23703302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 26615738 - 26615691
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| | |||||| |||||||||||||||||||||||    
T  26615738 agttttgcacttatgagcaaaatgccccttgaacttgaaaatttatat 26615691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 9033733 - 9033778
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||    
T  9033733 ttttgcacttatgtgcaaaatgccccttaaacttgaaaatttatat 9033778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 18806844 - 18806900
Alignment:
Q  65 ttatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttg 122  Q
    |||||||||||||| | |||||| ||||||| ||||| ||||||||||||||||||||    
T  18806844 ttatccttaaaagtgattgcattgtcactga-ttgtgaagcatattagctaagttttg 18806900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 27134436 - 27134481
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||    
T  27134436 ttttgcacttatgtgcaaaatgccccctgaacttgaaaatttatat 27134481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 38623771 - 38623726
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||    
T  38623771 ttttgcacttatgtgcaaaatgccccttaaacttgaaaatttatat 38623726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 13698261 - 13698214
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    |||||| |||||||||| |||||| ||| |||||||||||||||||||    
T  13698261 agttttccacttatgtgcaaaatgccccatgaacttgaaaatttatat 13698214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 26537714 - 26537667
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| |||||| |||| |||||| |||||||||||    
T  26537714 agttttgcacttatgtgcaaaatgcccctcgaacttaaaaatttatat 26537667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 32815014 - 32814967
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| |||||| |||  ||||||||||||||||||    
T  32815014 agttttgcacttatgtgcaaaatgccccccgaacttgaaaatttatat 32814967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 35156098 - 35156051
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| |||||| |||  ||||||||||||||||||    
T  35156098 agttttgcacttatgtgcaaaatgccccccgaacttgaaaatttatat 35156051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 42233575 - 42233528
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| |||||| | | |||||||||||||||||||    
T  42233575 agttttgcacttatgtgcaaaatgccacctgaacttgaaaatttatat 42233528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 48720934 - 48720981
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    |||||| |||||||||| ||||||||||  ||||||||||||||||||    
T  48720934 agttttacacttatgtgcaaaatgtcccccgaacttgaaaatttatat 48720981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 49216916 - 49216873
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttat 52  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||    
T  49216916 ttttgcacttatgtgcaaaatgccccctgaacttgaaaatttat 49216873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 8742568 - 8742523
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  8742568 ttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 8742523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 9034542 - 9034497
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  9034542 ttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 9034497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 11707432 - 11707387
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  11707432 ttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 11707387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22389135 - 22389082
Alignment:
Q  1 ccctagagttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||| ||||||||| |||||||||||||  |||  ||||||||||||||||||    
T  22389135 ccctaaagttttgcaattatgtgtaaaataccccccgaacttgaaaatttatat 22389082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 35392647 - 35392692
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  35392647 ttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 35392692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 36723975 - 36723930
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  36723975 ttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 36723930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 43505946 - 43505901
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  43505946 ttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 43505901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 46585540 - 46585495
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||||| ||||| |||||||||||    
T  46585540 ttttgcacttatgtgcaaaatgccccttaaacttaaaaatttatat 46585495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 12770231 - 12770279
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatg 55  Q
    ||||||||||||||||| ||||||||||   ||||| ||||||||||||    
T  12770231 agttttgcacttatgtgcaaaatgtcccccaaacttaaaaatttatatg 12770279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 38833673 - 38833717
Alignment:
Q  10 tttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||||||| ||| | ||||| |||||||||||    
T  38833673 tttgcacttatgtgtaaaatgccccctaaactttaaaatttatat 38833717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 52869823 - 52869871
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatg 55  Q
    |||||| |||||||||| |||||| |||  |||||||||||||||||||    
T  52869823 agttttacacttatgtgcaaaatgccccccgaacttgaaaatttatatg 52869871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 26928236 - 26928355
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||||||||| |||||| ||| |||||||||||||||||||         ||||||||||||||| | |||||||||||||||||||||||||    
T  26928236 agttttgtacttatgtgcaaaatgccccctgaacttgaaaatttatatatattttttcttatccttaaaagtgattgcattatcactgaattgtggagca 26928335  T
Q  107 tattagctaagttttgacgg 126  Q
    ||||||||||||||||||||    
T  26928336 tattagctaagttttgacgg 26928355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 26831693 - 26831811
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||||||||| |||||| ||| |||||||||||||||||||         ||||||||||||||| |||||||||||||||||||||||||||    
T  26831693 agttttgtacttatgtgcaaaatgccccatgaacttgaaaatttatatatattttttcttatccttaaaagtgactgcattatcactgaattgtggagca 26831792  T
Q  107 tattagctaagttttgacgg 126  Q
    | ||||||||||||||||||    
T  26831793 t-ttagctaagttttgacgg 26831811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 14102981 - 14103098
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||| ||| | || ||||||||||||||         ||||||||||||||| | |||||||||||||||||||||||||    
T  14102981 agttttgcacttatgtgcaaaatgccccctaaatttgaaaatttatat-tttgttttcttatccttaaaagtgattgcattatcactgaattgtggagca 14103079  T
Q  107 tattagctaagttttgacg 125  Q
    |||||||||||||||||||    
T  14103080 tattagctaagttttgacg 14103098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 14412998 - 14413115
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||| ||| | || ||||||||||||||         ||||||||||||||| | |||||||||||||||||||||||||    
T  14412998 agttttgcacttatgtgcaaaatgccccctaaatttgaaaatttatat-tttgttttcttatccttaaaagtgattgcattatcactgaattgtggagca 14413096  T
Q  107 tattagctaagttttgacg 125  Q
    |||||||||||||||||||    
T  14413097 tattagctaagttttgacg 14413115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 122
Target Start/End: Complemental strand, 29418069 - 29417955
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||||         ||||||||||||||| |||||||| |||||| |||||| ||||    
T  29418069 agttttgcacttatgtgcaaaatgccccctgaacttgaaaatttatattttttttttcttatccttaaaagtgactgcattgtcactg-attgtgaagca 29417971  T
Q  107 tattagctaagttttg 122  Q
    ||||||||||||||||    
T  29417970 tattagctaagttttg 29417955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 126
Target Start/End: Complemental strand, 15753197 - 15753135
Alignment:
Q  64 cttatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttgacgg 126  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||    
T  15753197 cttatccttaaaagtgactgcattatcactgaattgtggagcatattagccaagttttaacgg 15753135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 123
Target Start/End: Complemental strand, 14103842 - 14103726
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtccct-tgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagc 105  Q
    ||||||| | |||||||||||||| |||  |||||||||||||||||||         ||||||||||||||| |||||||||||| |||| ||||||||    
T  14103842 agttttgtatttatgtgtaaaatgcccccatgaacttgaaaatttatat-atttttttcttatccttaaaagtgactgcattatcattgaaatgtggagc 14103744  T
Q  106 atattagctaagttttga 123  Q
    ||||||||||||||||||    
T  14103743 atattagctaagttttga 14103726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 123
Target Start/End: Complemental strand, 14413859 - 14413743
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtccct-tgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagc 105  Q
    ||||||| | |||||||||||||| |||  |||||||||||||||||||         ||||||||||||||| |||||||||||| |||| ||||||||    
T  14413859 agttttgtatttatgtgtaaaatgcccccatgaacttgaaaatttatat-atttttttcttatccttaaaagtgactgcattatcattgaaatgtggagc 14413761  T
Q  106 atattagctaagttttga 123  Q
    ||||||||||||||||||    
T  14413760 atattagctaagttttga 14413743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 15752388 - 15752502
Alignment:
Q  8 gttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagcat 107  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||         |||||| |||||||| | ||||||   |||||||||||||||||    
T  15752388 gttttgcacttatgtgcaaagtgtcccttgaacttgaaaatttatat-ttttttttcttatctttaaaagtgattgcatt---actgaattgtggagcat 15752483  T
Q  108 attagctaagttttgacgg 126  Q
    ||||| |||||||||||||    
T  15752484 attagataagttttgacgg 15752502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 122
Target Start/End: Complemental strand, 34959090 - 34958976
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    |||||| |||||||||| |||||||||| |||||||||||||||||||         ||||||||||||||| |||||||| || ||| |||||| ||||    
T  34959090 agttttacacttatgtgcaaaatgtcccctgaacttgaaaatttatatattttttttcttatccttaaaagtgactgcattgtcgctg-attgtgaagca 34958992  T
Q  107 tattagctaagttttg 122  Q
    |||||| |||||||||    
T  34958991 tattagttaagttttg 34958976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 36897611 - 36897674
Alignment:
Q  64 cttatccttaaaa-gtcactgcattatcactgaattgtggagcatattagctaagttttgacgg 126  Q
    ||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||    
T  36897611 cttatccttaaaaagtgactgcattatcactgaattgtagagcatattagctaagttttgacgg 36897674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 26832502 - 26832441
Alignment:
Q  64 cttatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttgacg 125  Q
    ||||||||||||||| | |||||||||||||||||| ||||||||||||||| |||||||||    
T  26832502 cttatccttaaaagtgattgcattatcactgaattgcggagcatattagctatgttttgacg 26832441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 44950594 - 44950542
Alignment:
Q  68 tccttaaaagtcactgcattatcactgaattgtggagcatattagctaagttt 120  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  44950594 tccttaaaagtgactgcattatcattgaattgtggagcatattagctaagttt 44950542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 122
Target Start/End: Original strand, 17774454 - 17774566
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||| ||| |||| ||||||||||||||         ||||||||||||||| ||| |||| |||||| |||||| | ||    
T  17774454 agttttgcacttatgtgcaaaatgccccctgaaattgaaaatttatat--attttttcttatccttaaaagtgactacattgtcactg-attgtgaatca 17774550  T
Q  107 tattagctaagttttg 122  Q
    ||||||||||||||||    
T  17774551 tattagctaagttttg 17774566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 105
Target Start/End: Original strand, 43759652 - 43759749
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagc 105  Q
    ||||||||||||||||| |||||| ||| | |||||||||||||||||         |||||| |||||||| | ||||||||||||||||||||||||    
T  43759652 agttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat-tttgttttcttatctttaaaagtgattgcattatcactgaattgtggagc 43759749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 33227831 - 33227878
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| |||||| || ||||||||||||||||||||    
T  33227831 agttttgcacttatgtgcaaaatgcccgttgaacttgaaaatttatat 33227878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 42260899 - 42260960
Alignment:
Q  64 cttatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttgacgg 126  Q
    |||||||||| |||| ||||||||||||||| |||||| | |||||||||||| |||||||||    
T  42260899 cttatccttagaagtgactgcattatcactg-attgtgaaacatattagctaaattttgacgg 42260960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 16083148 - 16083193
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||    
T  16083148 ttttgcacttatgtgcaaaatgacccttaaacttgaaaatttatat 16083193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 24213310 - 24213265
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||    
T  24213310 ttttgcacttatgtgcaaaatgccccttaaacttgaaaatttatat 24213265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 33210425 - 33210470
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||    
T  33210425 ttttgcacttatgtgcaaaatgtcccctaaacttgaaaatttatat 33210470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 34345891 - 34345846
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||    
T  34345891 ttttgcacttatgtgcaaaatgtcccctcaacttgaaaatttatat 34345846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 2755958 - 2755911
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| |||||| ||| ||||||| |||||||||||    
T  2755958 agttttgcacttatgtgcaaaatgccccatgaacttaaaaatttatat 2755911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 23678811 - 23678764
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| |||||| |||  ||||||||||||||||||    
T  23678811 agttttgcacttatgtgcaaaatgccccccgaacttgaaaatttatat 23678764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 31308402 - 31308448
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  31308402 agttttgcacttatgtgcaaaatg-cccctgaacttgaaaatttatat 31308448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 21125612 - 21125574
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaa 45  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  21125612 agttttgcacttatgtgcaaaatgccccttgaacttgaa 21125574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 29644935 - 29644889
Alignment:
Q  8 gttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    |||||||||||||||| |||||| ||| ||||||||||||| |||||    
T  29644935 gttttgcacttatgtgcaaaatgccccatgaacttgaaaatatatat 29644889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 19072121 - 19072076
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  19072121 ttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 19072076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 21366409 - 21366454
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  21366409 ttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 21366454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 34345388 - 34345433
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  34345388 ttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 34345433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 35668455 - 35668410
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    |||||||||||||||||||||| ||| | ||||| |||||||||||    
T  35668455 ttttgcacttatgtgtaaaatgccccctaaacttaaaaatttatat 35668410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 38184340 - 38184385
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  38184340 ttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 38184385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 38449974 - 38450019
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||||||| | ||||| |||||||||||    
T  38449974 ttttgcacttatgtgcaaaatgtcccctaaacttaaaaatttatat 38450019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 48343734 - 48343779
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  48343734 ttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 48343779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 33696651 - 33696699
Alignment:
Q  6 gagttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    |||||||||||||||||| ||||||  ||  ||||||||||||||||||    
T  33696651 gagttttgcacttatgtgcaaaatgctccccgaacttgaaaatttatat 33696699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 45259061 - 45259109
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatg 55  Q
    |||||||||||||||||||||||| |||   ||||| ||||||||||||    
T  45259061 agttttgcacttatgtgtaaaatgccccccaaacttaaaaatttatatg 45259109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 36112170 - 36112051
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||||         ||||||||||||||| |||||||||||||||||||||||| ||    
T  36112170 agttttgcacttatgtgcaaaatgccccctgaacttgaaaatttatattttgtttttcttatccttaaaagtgactgcattatcactgaattgtggaaca 36112071  T
Q  107 tattagctaagttttgacgg 126  Q
    |||||||||| |||||||||    
T  36112070 tattagctaaattttgacgg 36112051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 42259445 - 42259560
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagcata 108  Q
    ||||||||| ||||| |||||| ||| |||||||||||||||||||         ||||||||||||||| |||||||||||||||||||||||||||||    
T  42259445 ttttgcactcatgtgcaaaatgccccatgaacttgaaaatttatat--tttatttcttatccttaaaagtgactgcattatcactgaattgtggagcata 42259542  T
Q  109 ttagctaagttttgacgg 126  Q
    ||||||||||||||||||    
T  42259543 ttagctaagttttgacgg 42259560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 6336993 - 6336875
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| |||||| || |||||| ||| |||||||||||||||||||         ||||||||||||||| |||||||||||||||||||||||||||    
T  6336993 agttttgtacttatatgcaaaatgccccctgaacttgaaaatttatat-atttttttcttatccttaaaagtgactgcattatcactgaattgtggagca 6336895  T
Q  107 tattagctaagttttgacgg 126  Q
    ||||||||||||||||||||    
T  6336894 tattagctaagttttgacgg 6336875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 1614863 - 1614746
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||||         |||||||||||||   |||||||||||||||||||||||||||    
T  1614863 agttttgcacttatgtgcaaaatgccccctgaacttgaaaatttatat-atttttttcttatccttaaaaaagactgcattatcactgaattgtggagca 1614765  T
Q  107 tattagctaagttttgacg 125  Q
    |||||||||||||||||||    
T  1614764 tattagctaagttttgacg 1614746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 56443292 - 56443408
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||||||||| |||||| |||  ||||||||||||||||||         ||||||||||||||| |||||||||||||||||||||||||||    
T  56443292 agttttgtacttatgtgcaaaatgcccc--gaacttgaaaatttatat-atttttttcttatccttaaaagttactgcattatcactgaattgtggagca 56443388  T
Q  107 tattagctaagttttgacgg 126  Q
    ||||||||||||||||||||    
T  56443389 tattagctaagttttgacgg 56443408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 17215099 - 17215214
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||||         ||||||||||||||| ||||||||||||||| |||||| ||||    
T  17215099 agttttgcacttatgtgcaaaatgccccctgaacttgaaaatttatat---ttttttcttatccttaaaagtgactgcattatcactg-attgtgaagca 17215194  T
Q  107 tattagctaagttttgacgg 126  Q
    |||||| |||||||||||||    
T  17215195 tattagttaagttttgacgg 17215214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 56444149 - 56444033
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||| | ||  |||||||||||||||||         ||||||||||||||| | |||||||||||||||||||||||||    
T  56444149 agttttgcacttatgtgcaaaatgcctcta-aacttgaaaatttatat-tttgttttcttatccttaaaagtgattgcattatcactgaattgtggagca 56444052  T
Q  107 tattagctaagttttgacg 125  Q
    |||||||||||||||||||    
T  56444051 tattagctaagttttgacg 56444033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 123
Target Start/End: Original strand, 1613610 - 1613725
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||||||||| |||||| | | |||||||||||||||||||         ||||||||||||||| | |||||||||||| ||||||||||||    
T  1613610 agttttgtacttatgtgcaaaatgcctcctgaacttgaaaatttatat-atttttttcttatccttaaaagtgattgcattatcactaaattgtggagca 1613708  T
Q  107 tattagctaagttttga 123  Q
    |||||||||||||||||    
T  1613709 tattagctaagttttga 1613725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 55082656 - 55082716
Alignment:
Q  66 tatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttgacgg 126  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  55082656 tatccttaaaagtgactgcattatcactgaattgtggagcatattagctaaattttgacgg 55082716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 42260239 - 42260120
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||  ||| |||| ||||||||||||||         ||||||||||||||| | |||||||||||| ||||||| ||||    
T  42260239 agttttgcacttatgtgcaaaataccccctgaatttgaaaatttatatattttttttcttatccttaaaagtgattgcattatcacttaattgtgtagca 42260140  T
Q  107 tattagctaagttttgacgg 126  Q
    |||| |||||||||||||||    
T  42260139 tattggctaagttttgacgg 42260120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 48083108 - 48083224
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||| ||| |||| || |||||||||||         ||||||||||||||  |||||| ||||||||||||||||||||    
T  48083108 agttttgcacttatgtgcaaaatgccccctgaatttaaaaatttatat---ttttttcttatccttaaaagcgactgcaatatcactgaattgtggagca 48083204  T
Q  107 tattagctaagttttgacgg 126  Q
    | |||||||| |||||||||    
T  48083205 tgttagctaaattttgacgg 48083224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 116
Target Start/End: Original strand, 23590641 - 23590749
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||||| | |||||||||||||||||||         ||||||||||||||| | | |||||||||| ||||||||| ||    
T  23590641 agttttgcacttatgtgcaaaatgtctcctgaacttgaaaatttatat-tttttttccttatccttaaaagtgattacattatcactaaattgtggaaca 23590739  T
Q  107 tattagctaa 116  Q
    ||||||||||    
T  23590740 tattagctaa 23590749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 55083431 - 55083314
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||| ||| | |||||||||||||||||         ||||||||||||||| | |||||||| ||| |||||| ||  |    
T  55083431 agttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat-tttgttttcttatccttaaaagtgattgcattattactaaattgtagaaga 55083333  T
Q  107 tattagctaagttttgacg 125  Q
    |||||||||||||||||||    
T  55083332 tattagctaagttttgacg 55083314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 4630745 - 4630790
Alignment:
Q  64 cttatccttaaaagtcactgcattatcactgaattgtggagcatat 109  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  4630745 cttatccttaaaagtgactgcattatcactgaattgtggagcatat 4630790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 12800375 - 12800498
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaa-cttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcatta---tcactgaattgtgg 102  Q
    ||||||||||||||||| |||||| || || || |||||||||||||||         ||||||||||||||| | |||||||   |||||||||||| |    
T  12800375 agttttgcacttatgtgcaaaatgcccgtttaaacttgaaaatttatatattttttttcttatccttaaaagtgattgcattattatcactgaattgtag 12800474  T
Q  103 agcatattagctaagttttgacgg 126  Q
    ||||||||||||| ||||||||||    
T  12800475 agcatattagctatgttttgacgg 12800498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 15739624 - 15739577
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||    
T  15739624 agttttgcacttatgtgcaaaatgccccttgaacttgaaaatttatat 15739577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 52177313 - 52177266
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||    
T  52177313 agttttgcacttatgtgcaaaatgccccttgaacttgaaaatttatat 52177266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 39334293 - 39334236
Alignment:
Q  64 cttatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttg 122  Q
    ||||||||||||||| |||||||| |||||| |||||| ||||||||||||||||||||    
T  39334293 cttatccttaaaagtgactgcattgtcactg-attgtgaagcatattagctaagttttg 39334236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 220765 - 220720
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||    
T  220765 ttttgcacttatgtgcaaaatgtcccttgaacttgaaaaattatat 220720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 6077418 - 6077361
Alignment:
Q  64 cttatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagtttt 121  Q
    ||||||||||||||| | ||||||||||||||||| ||||||||| ||||||| ||||    
T  6077418 cttatccttaaaagtgaatgcattatcactgaattatggagcataatagctaaatttt 6077361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 7389574 - 7389631
Alignment:
Q  64 cttatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagtttt 121  Q
    ||||||||||||||| | ||||||||||||||||| ||||||||| ||||||| ||||    
T  7389574 cttatccttaaaagtgaatgcattatcactgaattatggagcataatagctaaatttt 7389631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 7862864 - 7862765
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    |||||| |||||||||| |||||||||| | |||||||||||||||||         |||||||||||| || |||||||| ||| ||||||||||||||    
T  7862864 agttttacacttatgtgcaaaatgtcccctaaacttgaaaatttatat-atatttttcttatccttaaatgtgactgcattttcattgaattgtggagca 7862766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 4941038 - 4940991
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||||    
T  4941038 agttttgcacttatgtgtaaaatgtcccccgaacttaaaaatttatat 4940991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 36111642 - 36111689
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  36111642 agttttgcacttatgtgcaaaatgccccctgaacttgaaaatttatat 36111689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 25706033 - 25705985
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatg 55  Q
    ||||||||||||||||| |||||||| |  |||||||||||||||||||    
T  25706033 agttttgcacttatgtgcaaaatgtctcccgaacttgaaaatttatatg 25705985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 48083882 - 48083830
Alignment:
Q  71 ttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttga 123  Q
    |||||||| | |||||||||||||||||||| ||||||| | |||||||||||    
T  48083882 ttaaaagtgaatgcattatcactgaattgtgcagcatatgaactaagttttga 48083830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 9359752 - 9359799
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||| |||||||||||||||| || || |||||||||||||||||    
T  9359752 agttttgaacttatgtgtaaaatgccctttaaacttgaaaatttatat 9359799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 12594737 - 12594784
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| |||||| |||  ||||||||||||||||||    
T  12594737 agttttgcacttatgtgcaaaatgccccccgaacttgaaaatttatat 12594784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 23161260 - 23161299
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaa 46  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  23161260 agttttgcacttatgtgcaaaatgccccttgaacttgaaa 23161299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 23465773 - 23465820
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| ||||||||||  |||||| |||||||||||    
T  23465773 agttttgcacttatgtgcaaaatgtcccccgaacttaaaaatttatat 23465820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 38575705 - 38575751
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| |||||| |||| ||||||||||||||||||    
T  38575705 agttttgcacttatgtgcaaaatg-ccctcgaacttgaaaatttatat 38575751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 40145809 - 40145856
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    |||||| |||||||||| ||||||||||  ||||||||||||||||||    
T  40145809 agttttacacttatgtgcaaaatgtcccccgaacttgaaaatttatat 40145856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 205119 - 205081
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaa 47  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  205119 ttttgcacttatgtgcaaaatgtcccttaaacttgaaaa 205081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 1565108 - 1565150
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaattta 51  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||    
T  1565108 ttttgcacttatgtgtaaaatgccccttaaacttaaaaattta 1565150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 55778172 - 55778130
Alignment:
Q  12 tgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    |||||||||||| |||||||| | |||||||||||||||||||    
T  55778172 tgcacttatgtgcaaaatgtctcctgaacttgaaaatttatat 55778130  T

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Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 55842352 - 55842310
Alignment:
Q  12 tgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    |||||||||||| |||||||| | |||||||||||||||||||    
T  55842352 tgcacttatgtgcaaaatgtctcctgaacttgaaaatttatat 55842310  T

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Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 7862024 - 7862077
Alignment:
Q  1 ccctagagttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||| ||||||||||||| ||| ||||||||||  |||||| |||||||||||    
T  7862024 ccctaaagttttgcacttacgtgcaaaatgtcccccgaacttaaaaatttatat 7862077  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22535912 - 22535859
Alignment:
Q  1 ccctagagttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||| ||||||||||||||||| |||||| ||||  ||||| |||||||||||    
T  22535912 ccctaaagttttgcacttatgtgcaaaatgcccctcaaacttaaaaatttatat 22535859  T

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Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 29617509 - 29617464
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||  ||||| |||||||||||||||||    
T  29617509 ttttgcacttatgtgcaaaataccccttaaacttgaaaatttatat 29617464  T

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Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 38392193 - 38392238
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  38392193 ttttgcacttatgtgcaaaatggcccctaaacttgaaaatttatat 38392238  T

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Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 39633516 - 39633471
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  39633516 ttttgcacttatgtgcaaaatgccccataaacttgaaaatttatat 39633471  T

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Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 40034299 - 40034254
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  40034299 ttttgcacttatgtgcaaaatgccccataaacttgaaaatttatat 40034254  T

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Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 41904662 - 41904617
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  41904662 ttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 41904617  T

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Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 42987983 - 42987938
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  42987983 ttttgcacttatgtgcaaaatgccccgtaaacttgaaaatttatat 42987938  T

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Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 46614654 - 46614609
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    |||||||||||||||||||||| |   |||||||||||||||||||    
T  46614654 ttttgcacttatgtgtaaaatgccaaatgaacttgaaaatttatat 46614609  T

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Target: scaffold0132 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 42407 - 42283
Alignment:
Q  1 ccctagagttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgt 100  Q
    ||||| ||||||| ||||||||| |||||| ||| |||||||||||||||||||         |||||| |||||||| |||||||||||||||||||||    
T  42407 ccctaaagttttgtacttatgtgcaaaatgccccgtgaacttgaaaatttatat-atttttttcttatctttaaaagtgactgcattatcactgaattgt 42309  T
Q  101 ggagcatattagctaagttttgacgg 126  Q
    ||||||||||||||||||||||||||    
T  42308 ggagcatattagctaagttttgacgg 42283  T

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Target: scaffold0340 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 1468 - 1585
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||||||||| |||||| ||| |||||||||||||||||||         ||||||||||||||| |||||||||||| ||||||||||||||    
T  1468 agttttgtacttatgtgcaaaatgccccctgaacttgaaaatttatat-atttttttcttatccttaaaagtgactgcattatcattgaattgtggagca 1566  T
Q  107 tattagctaagttttgacg 125  Q
    |||||||||||||||||||    
T  1567 tattagctaagttttgacg 1585  T

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Target: scaffold0340; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 123
Target Start/End: Complemental strand, 2319 - 2205
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||||||||||||| |||||| |||   |||||||||||||||||         ||||||||||||| | | |||||||||||||||||||||||||    
T  2319 agttttgcacttatgtgcaaaatgccccca-aacttgaaaatttatat-tttgttttcttatccttaaaaatgattgcattatcactgaattgtggagca 2222  T
Q  107 tattagctaagttttga 123  Q
    |||||||||||||||||    
T  2221 tattagctaagttttga 2205  T

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Target: scaffold0113 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 12694 - 12753
Alignment:
Q  64 cttatccttaaaagtcactgcattatcactgaattgtggagcatattagctaagttttga 123  Q
    ||||||| ||||||| | || |||||||||||||||| ||||||||||||||||||||||    
T  12694 cttatccctaaaagtgattgtattatcactgaattgtagagcatattagctaagttttga 12753  T

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Target: scaffold0219 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 120
Target Start/End: Original strand, 22290 - 22402
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatatgnnnnnnnncttatccttaaaagtcactgcattatcactgaattgtggagca 106  Q
    ||||||| ||||||||| |||||  ||| |||||||||||||||||||         ||||| ||||||||| ||| | |||||||| ||||||||| ||    
T  22290 agttttgtacttatgtgcaaaataccccctgaacttgaaaatttatat-tttttttccttatacttaaaagtgactactttatcactaaattgtggaaca 22388  T
Q  107 tattagctaagttt 120  Q
    ||||||||||||||    
T  22389 tattagctaagttt 22402  T

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Target: scaffold0945 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0945
Description:

Target: scaffold0945; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 2149 - 2102
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| |||||| || | ||||||||||||||||||    
T  2149 agttttgcacttatgtgcaaaatgcccatcgaacttgaaaatttatat 2102  T

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Target: scaffold0083 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 3390 - 3437
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    ||||||||||||||||| |||||| |||  ||||||||||||||||||    
T  3390 agttttgcacttatgtgcaaaatgccccccgaacttgaaaatttatat 3437  T

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Target: scaffold0060 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 67271 - 67224
Alignment:
Q  7 agttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    |||||| |||||||||| |||||| ||| |||||||||||||||||||    
T  67271 agttttacacttatgtgcaaaatgacccctgaacttgaaaatttatat 67224  T

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Target: scaffold0214 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 28643 - 28598
Alignment:
Q  9 ttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttatat 54  Q
    |||| |||||||||| |||||| ||||| |||||||||||||||||    
T  28643 ttttacacttatgtgcaaaatgccccttaaacttgaaaatttatat 28598  T

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Target: scaffold0063 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 34201 - 34150
Alignment:
Q  1 ccctagagttttgcacttatgtgtaaaatgtcccttgaacttgaaaatttata 53  Q
    ||||| |||||| |||||| ||| |||||| ||||||||||||||||||||||    
T  34201 ccctaaagttttacacttaagtgcaaaatg-cccttgaacttgaaaatttata 34150  T

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