View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8061_high_55 (Length: 268)
Name: NF8061_high_55
Description: NF8061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8061_high_55 |
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Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 7665540 - 7665301
Alignment:
| Q |
14 |
aatatagagatatgcacatagattcaccaagagactcatcattctcacttcgccttgaccattcgcatggccgggaataaata----tttcaaacctttt |
109 |
Q |
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| T |
7665540 |
aatatagagatatgcacatagattcaccaagagactcatcattctcacttcgccttgaccattcgcatggctgggaataaataaatattccaaacccttt |
7665441 |
T |
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| Q |
110 |
tccaccggtgctccaggacaactcaagtatcttgtcatagttgcgtattacttcactaagcgatataagcataaactctagccaaaaatcaccgctacaa |
209 |
Q |
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| T |
7665440 |
tccaccggtgctccaggacaactcaagtatcttgtcatagttgcgtattacttcactaagcgatataagcataaactctagccaaaaatcaccgctacaa |
7665341 |
T |
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| Q |
210 |
cgtactttgtttcttcaagcgaaacatgctcacccgatcg |
249 |
Q |
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| T |
7665340 |
cgtactttgtttcttcaagcgaaacatgctcacccgatcg |
7665301 |
T |
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