View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8061_high_61 (Length: 248)
Name: NF8061_high_61
Description: NF8061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8061_high_61 |
 | |
|
| [»] chr1 (4 HSPs) |
| |
|
| [»] chr7 (21 HSPs) |
| |
|
| [»] chr5 (1 HSPs) |
| |
|
| [»] chr8 (1 HSPs) |
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|
Alignment Details
Target: chr1 (Bit Score: 236; Significance: 1e-130; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 4678913 - 4678667
Alignment:
| Q |
1 |
tctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4678913 |
tctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaa |
4678814 |
T |
|
| Q |
101 |
gtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataag |
200 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
4678813 |
gtctattccctgaaataaagaatcta-ctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccttaag |
4678715 |
T |
|
| Q |
201 |
ggttttgcgttcttactaatgtccacattattcttctttttgaactcc |
248 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4678714 |
ggttttgcgttcttactaatgtccacattattcttctttttgaactcc |
4678667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 195
Target Start/End: Complemental strand, 34467089 - 34466955
Alignment:
| Q |
53 |
gtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaa |
152 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| || || ||| ||||| ||| ||| | |||||||||||| |||||||| | |||||| |
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|
| T |
34467089 |
gtccatattgatttcctcaaacttggcacgagtgattgacgaatggaagtcaattacctcatataaagaatctatttcaacagtagcgacaaa------- |
34466997 |
T |
|
| Q |
153 |
gagagtgtcctctttgccctctcgcaggcagttctcaacctcc |
195 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
34466996 |
-agagtgtcctctttgcattctcgcacgcagttctcaacctcc |
34466955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 195
Target Start/End: Original strand, 15594859 - 15595040
Alignment:
| Q |
14 |
aagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctga |
113 |
Q |
| |
|
||||||||||| ||| | | |||||| || || |||| |||||| || ||||| |||||||||| |||||||| |||||| | ||||| || || | | |
|
|
| T |
15594859 |
aagacaactctcaactatcttcatacaatccttaaaaaagtccatgttgatttcttcaaacttggaacgagtaaccgatgaaaagaagtcaataccgtta |
15594958 |
T |
|
| Q |
114 |
aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctcc |
195 |
Q |
| |
|
|||||| |||||||||||| || |||||| | ||||||||| ||| |||||||| ||||| ||||||||||| |||| |
|
|
| T |
15594959 |
aataaacaatctacctcaatggtagtgacagtagtaaaagagagtaccctttttgccctttcgcacgcagttctcaatctcc |
15595040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 100
Target Start/End: Complemental strand, 52549334 - 52549269
Alignment:
| Q |
35 |
catacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaa |
100 |
Q |
| |
|
||||||||| || |||||||||||||| ||||||||||||||||| | | | || ||||||||||| |
|
|
| T |
52549334 |
catacactccttaaaaaggtccatattcatttcctcaaacttggccctattgatcgatgaagaaaa |
52549269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 150; Significance: 2e-79; HSPs: 21)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 3 - 248
Target Start/End: Original strand, 8659177 - 8659422
Alignment:
| Q |
3 |
tttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagt |
102 |
Q |
| |
|
|||||||| ||||||||||||| |||||||| ||||||||| || ||||| |||||||| |||||||||||| |||||||||| || ||||| | |||| |
|
|
| T |
8659177 |
tttgaatcgctaagacaactctcaacagttttcatacactcattaaaaagatccatattcatttcctcaaacctggcacgagtgattaatgaacagaagt |
8659276 |
T |
|
| Q |
103 |
ctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataaggg |
202 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
8659277 |
ctattccctgaaataaagaatcgacctcaacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacaggcagttctcaacctccttaagga |
8659376 |
T |
|
| Q |
203 |
ttttgcgttcttactaatgtccacattattcttctttttgaactcc |
248 |
Q |
| |
|
||||| ||| |||||||||||| ||||||||||||||||||||| |
|
|
| T |
8659377 |
ttttgggttaccactaatgtccactttattcttctttttgaactcc |
8659422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 8654262 - 8654509
Alignment:
| Q |
1 |
tctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaa |
100 |
Q |
| |
|
|||||||||| || |||||||| | |||| | | |||||||| ||||||| ||||||||||||||||||||| || |||||||| || ||||||||||| |
|
|
| T |
8654262 |
tctttgaatctctgagacaactgtcaacaatattgatacactcattgaaaaagtccatattaatttcctcaaatttagcacgagtgattgatgaagaaaa |
8654361 |
T |
|
| Q |
101 |
gtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataag |
200 |
Q |
| |
|
||| |||||| |||||||| |||||||||||||||||||||||| | ||||||||| |||| ||||||||||| ||||||||||||||||||| |||| |
|
|
| T |
8654362 |
gtcgattcccataaataaagcatctacctcaacagtggtgacaaaagtaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaag |
8654461 |
T |
|
| Q |
201 |
ggttttgcgttcttactaatgtccacattattcttctttttgaactcc |
248 |
Q |
| |
|
| ||||| ||| ||||| ||||| ||||||||||||||||||||| |
|
|
| T |
8654462 |
gattttgggttaccgctaatttccactttattcttctttttgaactcc |
8654509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 10494730 - 10494483
Alignment:
| Q |
1 |
tctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaa |
100 |
Q |
| |
|
|||||||||| || |||||||| | |||| | | |||||||||| |||||| ||| ||||||||||||||||| ||||||||||| || ||||||||||| |
|
|
| T |
10494730 |
tctttgaatccctgagacaactgtcaacaatattcatacactcgatgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaa |
10494631 |
T |
|
| Q |
101 |
gtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataag |
200 |
Q |
| |
|
||| |||||| |||||||| ||| |||||||| ||||||||||| | ||||||||| |||| ||||||||||| ||||||||||||||||||| |||| |
|
|
| T |
10494630 |
gtcgattcccataaataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaag |
10494531 |
T |
|
| Q |
201 |
ggttttgcgttcttactaatgtccacattattcttctttttgaactcc |
248 |
Q |
| |
|
| ||||| ||| ||| |||||||| ||||||||||||||||||||| |
|
|
| T |
10494530 |
gattttggattcccactgatgtccacgttattcttctttttgaactcc |
10494483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 35 - 248
Target Start/End: Original strand, 8667265 - 8667478
Alignment:
| Q |
35 |
catacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaaca |
134 |
Q |
| |
|
||||||||| ||||||| |||||| |||| ||||||||| || ||||||||||| |||||| ||||||| |||||| |||||||| ||||||||||||| |
|
|
| T |
8667265 |
catacactcattgaaaaagtccatgttaagttcctcaaatttagcacgagtaattgatgaacaaaagtcgattcccgtaaataaagcatctacctcaaca |
8667364 |
T |
|
| Q |
135 |
gtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattct |
234 |
Q |
| |
|
||||| ||||| || ||||||||| |||| ||||||||||| ||||||||||||||||||| ||||| ||||| ||||| ||| |||||||| ||||||| |
|
|
| T |
8667365 |
gtggtaacaaaagcaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttctgactgatgtccactttattct |
8667464 |
T |
|
| Q |
235 |
tctttttgaactcc |
248 |
Q |
| |
|
||||||| |||||| |
|
|
| T |
8667465 |
tcttttttaactcc |
8667478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 248
Target Start/End: Original strand, 1301274 - 1301519
Alignment:
| Q |
3 |
tttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagt |
102 |
Q |
| |
|
|||||||| ||||||||||||| ||| |||| ||||||| || ||||| |||||||||||||||||||||||||||||||| || ||||| | |||| |
|
|
| T |
1301274 |
tttgaatcgctaagacaactctcaacggtttttgtacactcattaaaaagatccatattaatttcctcaaacttggcacgagtgattaatgaacagaagt |
1301373 |
T |
|
| Q |
103 |
ctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataaggg |
202 |
Q |
| |
|
| |||||||||||||||||||| |||||||| |||||||| || || |||||||||||||| ||||||||||| || ||| |||||||||||| ||||| |
|
|
| T |
1301374 |
cgattccctgaaataaagaatcgacctcaacggtggtgactaaagcaaaagagagtgtcctttttgccctctcacacgcaattctcaacctccttaagga |
1301473 |
T |
|
| Q |
203 |
ttttgcgttcttactaatgtccacattattcttctttttgaactcc |
248 |
Q |
| |
|
||| ||| |||||||||||| |||||||||||| |||||||| |
|
|
| T |
1301474 |
tttctggttaccactaatgtccactttattcttctttctgaactcc |
1301519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 13333812 - 13333565
Alignment:
| Q |
1 |
tctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaa |
100 |
Q |
| |
|
|||||||||| || |||||||| | |||| | | |||||||||| |||||| ||| ||||||||||||||||| ||||||||||| || ||||||||||| |
|
|
| T |
13333812 |
tctttgaatccctgagacaactgtcaacaatattcatacactcgatgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaa |
13333713 |
T |
|
| Q |
101 |
gtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataag |
200 |
Q |
| |
|
||| |||||| |||||||| |||||| ||||||||||||||||| | || |||||| |||| ||| ||||||| ||||||||||||||||||| |||| |
|
|
| T |
13333712 |
gtcgattcccataaataaagcatctacttcaacagtggtgacaaaagaaaaggagagtatccttttttccctctcacaggcagttctcaacctccttaag |
13333613 |
T |
|
| Q |
201 |
ggttttgcgttcttactaatgtccacattattcttctttttgaactcc |
248 |
Q |
| |
|
| ||||| |||| ||| || || || ||||||||||||||||||||| |
|
|
| T |
13333612 |
gattttgggttcccactgatatcgacgttattcttctttttgaactcc |
13333565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 17 - 248
Target Start/End: Original strand, 3147092 - 3147323
Alignment:
| Q |
17 |
acaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaat |
116 |
Q |
| |
|
|||||||||||||||||||| |||||| ||||||| |||||||| ||||||||||||||||||||||| || |||||| | ||||| | |||||||||| |
|
|
| T |
3147092 |
acaactcttaacagtttccaaacactcagtgaaaagatccatattgatttcctcaaacttggcacgagtgattgatgaaaataagtcaaatccctgaaat |
3147191 |
T |
|
| Q |
117 |
aaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttac |
216 |
Q |
| |
|
|||||||||| ||||| ||||||| | || ||||| ||| | | ||||| || || || || ||| ||||||||| ||||| | ||| ||||| || |
|
|
| T |
3147192 |
aaagaatctatctcaatggtggtgatgacagcaaaagatagtattcgttttgctctttcacacgccgttttcaacctccttaaggctcttgagttctcac |
3147291 |
T |
|
| Q |
217 |
taatgtccacattattcttctttttgaactcc |
248 |
Q |
| |
|
||||||| || || |||||||| || |||||| |
|
|
| T |
3147292 |
taatgtctaccttgttcttcttcttaaactcc |
3147323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 195
Target Start/End: Original strand, 17267758 - 17267945
Alignment:
| Q |
8 |
atcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctatt |
107 |
Q |
| |
|
|||||||||||| ||| |||| | ||||| ||||| | |||||||||||||| ||||||||||||||||||||||| || || |||||||| || | |
|
|
| T |
17267758 |
atcactaagacacttctcaacaatctccatgcactcatcaaaaaggtccatattgatttcctcaaacttggcacgagtgattgacgaagaaaaatcaaca |
17267857 |
T |
|
| Q |
108 |
ccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctcc |
195 |
Q |
| |
|
|||| |||||||| |||||||||||| |||| ||| |||||||||| |||||||| ||||| | || || |||||||||||||||| |
|
|
| T |
17267858 |
cccttaaataaagcgtctacctcaacattggtcacagaggcgaaagaaagtgtcctttttgctttttcacatgcagttctcaacctcc |
17267945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 8 - 225
Target Start/End: Original strand, 17260060 - 17260277
Alignment:
| Q |
8 |
atcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctatt |
107 |
Q |
| |
|
|||||||||||| ||| |||| | ||||| ||||| | |||||||||||||| ||||| ||||||||||||||||| || || |||||||| | | |
|
|
| T |
17260060 |
atcactaagacacttctcaacaatctccatgcactcataaaaaaggtccatattgatttcttcaaacttggcacgagtgattgacgaagaaaaattaaca |
17260159 |
T |
|
| Q |
108 |
ccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttg |
207 |
Q |
| |
|
|||| |||||||| |||||||||||| |||| ||| |||| ||||| |||||||| ||||| | || || |||||||||||||||| ||||| ||||| |
|
|
| T |
17260160 |
cccttaaataaagcgtctacctcaacattggtcacagaggcaaaagaaagtgtcctttttgctttttcacatgcagttctcaacctccttaaggcttttg |
17260259 |
T |
|
| Q |
208 |
cgttcttactaatgtcca |
225 |
Q |
| |
|
|||| | ||||||||| |
|
|
| T |
17260260 |
ggttcccaataatgtcca |
17260277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 238
Target Start/End: Original strand, 8646704 - 8646926
Alignment:
| Q |
16 |
gacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaa |
115 |
Q |
| |
|
||||||||| ||||||||||| ||| ||| |||| || |||||||| ||| | ||||| ||||||||||| || |||||| |||||| || || | ||| |
|
|
| T |
8646704 |
gacaactctcaacagtttccaaacattcgatgaacagatccatattgattgcgtcaaatttggcacgagtgattgatgaaataaagtcaatgccattaaa |
8646803 |
T |
|
| Q |
116 |
taaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttctta |
215 |
Q |
| |
|
||||||||||| |||| |||||| | | || ||||| |||||||| ||||| |||||||| || ||||||||||||| ||||| | ||| ||| | |
|
|
| T |
8646804 |
taaagaatctaattcaatggtggtgcaagaagcaaaagatagtgtcctttttgctctctcgcatgccgttctcaacctccttaaggctcttgagtttcca |
8646903 |
T |
|
| Q |
216 |
ctaatgtccacattattcttctt |
238 |
Q |
| |
|
|||||||||| || |||||||| |
|
|
| T |
8646904 |
gtaatgtccaccttgttcttctt |
8646926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 245
Target Start/End: Complemental strand, 27831217 - 27830987
Alignment:
| Q |
15 |
agacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaa |
114 |
Q |
| |
|
|||||||||| |||||| |||||||| || ||||||||||||||||| |||||||||||||| |||||||| || |||| | ||||| || |||| || |
|
|
| T |
27831217 |
agacaactctcaacagtctccatacattcattgaaaaggtccatattgatttcctcaaactttgcacgagtgatcattgaaaagaagtcaatgccctcaa |
27831118 |
T |
|
| Q |
115 |
ataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttctt |
214 |
Q |
| |
|
|||| | ||||| ||||| ||| ||| ||| | |||||||||||||| |||||| |||| || ||||||| ||||| |||| | ||| |||| |
|
|
| T |
27831117 |
ataaggcatctatctcaatagtagtgtcaacagaaaaagagagtgtcctttttgccttctcacattaggttctcagcctcctcaaggctcttgggttccc |
27831018 |
T |
|
| Q |
215 |
actaatgtccacattattcttctttttgaac |
245 |
Q |
| |
|
|||||||||||| | |||||||| |||||| |
|
|
| T |
27831017 |
actaatgtccactcttttcttcttcttgaac |
27830987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 6789337 - 6789516
Alignment:
| Q |
14 |
aagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctga |
113 |
Q |
| |
|
||||||||||| ||| || | ||||||||| || |||| |||||||| ||||||||||||||||| ||||||| |||||| ||||| || |||||| |
|
|
| T |
6789337 |
aagacaactctcaacggtcttcatacactcattaaaaatatccatattgatttcctcaaacttggcccgagtaagtgatgaaatgaagtcgatgccctga |
6789436 |
T |
|
| Q |
114 |
aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacct |
193 |
Q |
| |
|
|||||||| |||||||||| ||| ||||| | | ||||||||| ||| || ||||| || || |||||||||||||| |
|
|
| T |
6789437 |
aataaagagtctacctcaatagtagtgacgacaacaaaagagagtacccttttggccctttcacacgcagttctcaacct |
6789516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 8616493 - 8616634
Alignment:
| Q |
1 |
tctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaa |
100 |
Q |
| |
|
|||| |||||| ||| |||||||| |||||| | ||||||||||| |||||||||||||| |||||||||||||| ||||||| || |||||||| || |
|
|
| T |
8616493 |
tcttagaatcattaaaacaactctcaacagtctttatacactcgttaaaaaggtccatattgatttcctcaaacttaacacgagtgattgatgaagagaa |
8616592 |
T |
|
| Q |
101 |
gtctattccctgaaataaagaatctacctcaacagtggtgac |
142 |
Q |
| |
|
|| || |||| | ||||| |||| | ||||| ||| ||||| |
|
|
| T |
8616593 |
atcgatgccctcacataaataatcaatctcaatagtagtgac |
8616634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 8673970 - 8673894
Alignment:
| Q |
8 |
atcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgag |
84 |
Q |
| |
|
|||| |||||||| ||| ||||||||||| ||||||||||||||| | ||||| |||||||||||||||||||||| |
|
|
| T |
8673970 |
atcaataagacaattctcaacagtttccaaacactcgttgaaaagattgatattgatttcctcaaacttggcacgag |
8673894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 8664159 - 8664289
Alignment:
| Q |
13 |
taagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctg |
112 |
Q |
| |
|
|||||||||||| ||||||||||| |||| ||||||||| |||||||| ||||| ||| |||||||||||| | ||| || | |||| || | ||| |
|
|
| T |
8664159 |
taagacaactctcaacagtttccaaacac--gttgaaaagatccatattgatttcatcatacttggcacgagcgaaggataaaaagaagtttaagcgctg |
8664256 |
T |
|
| Q |
113 |
aaataaagaatctacctcaacagtggtgacaaa |
145 |
Q |
| |
|
||| ||||||||||||| || |||||||||||| |
|
|
| T |
8664257 |
aaacaaagaatctaccttaatagtggtgacaaa |
8664289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 8586050 - 8585966
Alignment:
| Q |
13 |
taagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaaga |
97 |
Q |
| |
|
|||||||||||| |||||| | |||||||| || |||||||||||||| ||||||||||||||| |||| || || |||||||| |
|
|
| T |
8586050 |
taagacaactctcaacagtatttatacactcattaaaaaggtccatattgatttcctcaaacttgacacgcgtgattgatgaaga |
8585966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 248
Target Start/End: Original strand, 8545458 - 8545692
Alignment:
| Q |
14 |
aagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctga |
113 |
Q |
| |
|
|||||||| |||||||| |||||||||| | || ||||||||||| | || |||||||||||| ||||| || ||||| ||||||| || || ||| |
|
|
| T |
8545458 |
aagacaacaattaacagtgtccatacacttttcaaagaggtccatattcaattgctcaaacttggcccgagtgatgcatgaacaaaagtcaataccttga |
8545557 |
T |
|
| Q |
114 |
aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct |
213 |
Q |
| |
|
|||||| ||||| |||| |||| || | || | || |||||||| |||||| |||| ||||||||||||||||||| |||| || || |||| |
|
|
| T |
8545558 |
tataaagcatctaggtcaattgtggcctcagtgtcgtatgaaagtgtcctttttgccttctcacaggcagttctcaacctcctcaaggcttctgggttcc |
8545657 |
T |
|
| Q |
214 |
tactaatgtccacattattcttctttttgaactcc |
248 |
Q |
| |
|
|||||| ||| |||| |||||| | ||||||||| |
|
|
| T |
8545658 |
gactaatatcctcattgttcttcctcttgaactcc |
8545692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 8570136 - 8570368
Alignment:
| Q |
14 |
aagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctga |
113 |
Q |
| |
|
||||||||| ||||||||||||||||||| | || |||| |||||| ||||||||||||||||| || || || |||||| ||||| ||||||| | |
|
|
| T |
8570136 |
aagacaactattaacagtttccatacacttttcaaagaggttcatattcatttcctcaaacttggcccgggttattgatgaactgaagtcaattccctta |
8570235 |
T |
|
| Q |
114 |
aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct |
213 |
Q |
| |
|
||| || ||||| ||||| |||| || | | || |||||||| ||||||||||| || || ||||| ||||||| |||| ||||| |||| |
|
|
| T |
8570236 |
tatatagcatctagctcaattgtggcctcagtatcatatgaaagtgtcctttttgccctctcacaagctgttcttaacctcctcaaggcttttgggttcc |
8570335 |
T |
|
| Q |
214 |
tactaatgtccacattattcttctttttgaact |
246 |
Q |
| |
|
||||||| ||| | || |||||||| ||||||| |
|
|
| T |
8570336 |
tactaatatcctcgttgttcttcttcttgaact |
8570368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 29577873 - 29577793
Alignment:
| Q |
156 |
agtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttc |
236 |
Q |
| |
|
|||| ||||||||||||||| || |||||||||| | ||| ||| | ||||| |||| ||||||||||||||| |||||| |
|
|
| T |
29577873 |
agtgccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttc |
29577793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 8664919 - 8664971
Alignment:
| Q |
48 |
aaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaa |
100 |
Q |
| |
|
|||||||||||||| |||||||||||| | |||||||| || |||||| |||| |
|
|
| T |
8664919 |
aaaaggtccatattgatttcctcaaacctcgcacgagttattgatgaacaaaa |
8664971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 29582042 - 29581962
Alignment:
| Q |
156 |
agtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttc |
236 |
Q |
| |
|
|||||||||||||||||||| || || ||||||| | ||| ||| | ||||| |||| ||||||||||| ||| |||||| |
|
|
| T |
29582042 |
agtgtcctctttgccctctcacaagctgttctcagcttccttaaagcttttgggttcccactaatgtccaaattgttcttc |
29581962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 148; Significance: 3e-78; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 16657873 - 16657634
Alignment:
| Q |
1 |
tctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaa |
100 |
Q |
| |
|
|||||||||||| ||||||| ||| |||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||| || || ||||||||||| |
|
|
| T |
16657873 |
tctttgaatcacgaagacaattctcaacagttttcatacactcattgaaaagatccatattaatttcctcaaacttggcacgggtgattgatgaagaaaa |
16657774 |
T |
|
| Q |
101 |
gtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataag |
200 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| || |||||||||||||||| ||| |
|
|
| T |
16657773 |
gtcaattccctgaaataaagaatctacctcaacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaag |
16657674 |
T |
|
| Q |
201 |
ggttttgcgttcttactaatgtccacattattcttctttt |
240 |
Q |
| |
|
| | ||| |||| ||| |||||||| ||||||||||||| |
|
|
| T |
16657673 |
gctcttgagttcccacttatgtccaccttattcttctttt |
16657634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 193
Target Start/End: Original strand, 43625231 - 43625416
Alignment:
| Q |
8 |
atcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctatt |
107 |
Q |
| |
|
|||| ||||||||||||||||||||| || ||||||||||||||| |||||||| ||||| ||||| ||||||||||| || |||||| | ||||| || |
|
|
| T |
43625231 |
atcaataagacaactcttaacagttttcaaacactcgttgaaaagatccatatttatttcatcaaatttggcacgagtgattgatgaaaagaagtcaata |
43625330 |
T |
|
| Q |
108 |
ccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacct |
193 |
Q |
| |
|
|| | ||||||||||||||||||| |||| ||| | || ||||| |||||||| ||| | |||||||| || ||||||||||| |
|
|
| T |
43625331 |
ccacggaataaagaatctacctcaatagtgctgaacgaagcaaaagacagtgtcctttttcctctctcgcatgccgttctcaacct |
43625416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 235
Target Start/End: Original strand, 7542072 - 7542272
Alignment:
| Q |
35 |
catacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaaca |
134 |
Q |
| |
|
|||||||||||| ||||| |||||||| || |||||||||||||| | | | || |||||||||||||| || || |||||||||||||||||||||| | |
|
|
| T |
7542072 |
catacactcgttaaaaagatccatattcatctcctcaaacttggccctattgatcgatgaagaaaagtcaatgccttgaaataaagaatctacctcaata |
7542171 |
T |
|
| Q |
135 |
gtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattct |
234 |
Q |
| |
|
|||| |||| |||||| |||| || ||||||||||| || |||||||||||||||| |||| ||||| ||| |||||||||||| || |||| |
|
|
| T |
7542172 |
gtggcaacaacaaggaaagaaagtgatctttttgccctctcacaagcagttctcaacctcctcaaggcttttggattcccactaatgtccactttgttct |
7542271 |
T |
|
| Q |
235 |
t |
235 |
Q |
| |
|
| |
|
|
| T |
7542272 |
t |
7542272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 14703227 - 14703426
Alignment:
| Q |
8 |
atcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctatt |
107 |
Q |
| |
|
|||| |||||||||||| |||| | | || |||||| || |||| ||||||||| ||||| ||||||||||| | | | || |||||||||||||| || |
|
|
| T |
14703227 |
atcaataagacaactctcaacaatcttcacacactcattaaaaaagtccatattcatttcttcaaacttggccctattgatcgatgaagaaaagtcaatg |
14703326 |
T |
|
| Q |
108 |
ccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttg |
207 |
Q |
| |
|
| |||||||||| ||||||||||| ||||| ||||| |||||| ||||| || |||||||||||||| || |||||||| |||| ||||| ||||| |
|
|
| T |
14703327 |
cattgaaataaagcatctacctcaatagtggcgacaacttggaaagaaagtgttctttttgccctctcgcaagcggttctcaagctccttaaggcttttg |
14703426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 132
Target Start/End: Original strand, 12234508 - 12234632
Alignment:
| Q |
8 |
atcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctatt |
107 |
Q |
| |
|
||||||||||||||||| |||| | | ||||||||| | | ||| |||||||| ||||||||||||||||| | | | || ||||||||||| || || |
|
|
| T |
12234508 |
atcactaagacaactctcaacaatcttcatacactcaataagaagatccatattcatttcctcaaacttggccctattgatcgatgaagaaaaatcaatg |
12234607 |
T |
|
| Q |
108 |
ccctgaaataaagaatctacctcaa |
132 |
Q |
| |
|
|| | |||||||||||||||||||| |
|
|
| T |
12234608 |
ccttcaaataaagaatctacctcaa |
12234632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 12258925 - 12258806
Alignment:
| Q |
13 |
taagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctg |
112 |
Q |
| |
|
|||||||||||| |||||| | ||| || || |||||||| |||| ||| ||||||||||||||||||||| | || |||| |||||| || || || | |
|
|
| T |
12258925 |
taagacaactctcaacagtcttcatgcattcattgaaaagttccaaatttatttcctcaaacttggcacgattgattgatgcagaaaaatcaatgccatc |
12258826 |
T |
|
| Q |
113 |
aaataaagaatctacctcaa |
132 |
Q |
| |
|
| |||||||||||| ||||| |
|
|
| T |
12258825 |
acataaagaatctatctcaa |
12258806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 16662332 - 16662154
Alignment:
| Q |
17 |
acaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaat |
116 |
Q |
| |
|
|||||||| |||| | | |||||||||||| |||||| ||||||| ||||| ||||||||| ||||||| | |||| ||| ||||| || ||| || |
|
|
| T |
16662332 |
acaactctcaacaatcttcatacactcgttaaaaaggcccatattgatttcttcaaacttgacacgagtgagtgatgtagagaagtcaatgtcctcgtat |
16662233 |
T |
|
| Q |
117 |
aaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctcc |
195 |
Q |
| |
|
||| |||| | ||||| || |||||| || ||||||||||||||| || ||| | || || | |||||||||||||| |
|
|
| T |
16662232 |
aaataatcaatctcaatagcggtgaccaatttgaaagagagtgtccttttcgccttttcacaagaagttctcaacctcc |
16662154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 11999283 - 11999350
Alignment:
| Q |
65 |
ttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaa |
132 |
Q |
| |
|
|||||||||||| || ||| | || ||||||||||| || || || |||||||||||||||||||||| |
|
|
| T |
11999283 |
ttcctcaaactttgcccgattgatggatgaagaaaaatcaatgccttgaaataaagaatctacctcaa |
11999350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 12245698 - 12245631
Alignment:
| Q |
65 |
ttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaa |
132 |
Q |
| |
|
|||||||||||| || ||| | || ||||||||||| || || || |||||||||||||||||||||| |
|
|
| T |
12245698 |
ttcctcaaactttgcccgattgatggatgaagaaaaatcaatgccttgaaataaagaatctacctcaa |
12245631 |
T |
|
Back To:
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Target: chr4 (Bit Score: 105; Significance: 1e-52; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 35 - 247
Target Start/End: Complemental strand, 9336213 - 9336001
Alignment:
| Q |
35 |
catacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaaca |
134 |
Q |
| |
|
||||||||| ||||||| |||||| |||| ||||||||| ||||||||||| || |||||||||||||| |||||| |||||||| ||||||||||||| |
|
|
| T |
9336213 |
catacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaaca |
9336114 |
T |
|
| Q |
135 |
gtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattct |
234 |
Q |
| |
|
||||| ||||| || ||||| ||| |||| ||||||||||| ||||||||||||||||||| ||||| ||||| ||||| | |||||||| ||||||| |
|
|
| T |
9336113 |
gtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttctgcttgatgtccactttattct |
9336014 |
T |
|
| Q |
235 |
tctttttgaactc |
247 |
Q |
| |
|
||||||| ||||| |
|
|
| T |
9336013 |
tcttttttaactc |
9336001 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 191
Target Start/End: Original strand, 30775065 - 30775254
Alignment:
| Q |
2 |
ctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaag |
101 |
Q |
| |
|
|||||||||| |||||||||||| |||||| | |||||||| || |||||||||||||| ||||||||||||||| ||||||| || |||||||||||| |
|
|
| T |
30775065 |
ctttgaatcagtaagacaactctcaacagtctgtatacactcattaaaaaggtccatattgatttcctcaaacttgacacgagtgattgatgaagaaaag |
30775164 |
T |
|
| Q |
102 |
tctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaac |
191 |
Q |
| |
|
|| || | ||||||||| ||||| ||||||| |||| ||| ||| ||||||||||| |||||| | || || |||||||||||| |
|
|
| T |
30775165 |
tcaatgtcttgaaataaattatctatctcaacaaatgtgagaaacttgaaggagagtgtcctttttgccttttcacatgcagttctcaac |
30775254 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 190
Target Start/End: Original strand, 35132303 - 35132458
Alignment:
| Q |
35 |
catacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaaca |
134 |
Q |
| |
|
||||||||| || |||||||| ||| ||||||||||||||||| ||| | || ||||||||||| || || || ||||||||||||||||| |||| | |
|
|
| T |
35132303 |
catacactcattaaaaaggtctgcattcatttcctcaaacttggcgcgattgattgatgaagaaaaatcaatgccttgaaataaagaatctacttcaata |
35132402 |
T |
|
| Q |
135 |
gtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaa |
190 |
Q |
| |
|
||| |||| |||||| |||| ||||||||||||| ||||||||||||||| |
|
|
| T |
35132403 |
ttggcaacaacaaggaaagaaagtgatctctttgccctctagcaggcagttctcaa |
35132458 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 248
Target Start/End: Original strand, 28219744 - 28219977
Alignment:
| Q |
15 |
agacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaa |
114 |
Q |
| |
|
||||| |||| |||||||| || |||||| |||||||| |||||||| |||||||||||||| ||||||||||| |||||| | || || || || | || |
|
|
| T |
28219744 |
agacacctctcaacagttttcaaacactcattgaaaagatccatattgatttcctcaaacttagcacgagtaattgatgaaaagaaatcaatgccttcaa |
28219843 |
T |
|
| Q |
115 |
ataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttctt |
214 |
Q |
| |
|
|||||||||||||||||| |||| ||||| || ||||| |||||||| ||||| |||| ||| || ||||||||||||| ||||| | ||| ||| |
|
|
| T |
28219844 |
ataaagaatctacctcaatggtggcgacaacagcaaaagatagtgtcctttttgctctcttgcacgctgttctcaacctccttaaggctcttgagtttcc |
28219943 |
T |
|
| Q |
215 |
actaatgtccacattattcttctttttgaactcc |
248 |
Q |
| |
|
| |||||||||| || |||||||| || |||||| |
|
|
| T |
28219944 |
agtaatgtccaccttgttcttcttcttaaactcc |
28219977 |
T |
|
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Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 248
Target Start/End: Original strand, 43744635 - 43744875
Alignment:
| Q |
8 |
atcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctatt |
107 |
Q |
| |
|
|||| |||||||||||| |||| ||| || |||||||||||| || |||||||| |||||||||||||| | |||||| || | || | | || || || |
|
|
| T |
43744635 |
atcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgatttcctcaaacttagtacgagtgattgttgtaaagaaatcaatg |
43744734 |
T |
|
| Q |
108 |
ccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttg |
207 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||||||| || ||||| | |||||| ||||| || ||||| || ||||||||||||| ||| | | ||| |
|
|
| T |
43744735 |
ccctcaaataaagaatctacctcaatagtggtgacaacagcaaaagataatgtcctttttgctctttcgcatgctgttctcaacctccttaatgctcttg |
43744834 |
T |
|
| Q |
208 |
cgttcttactaatgtccacattattcttctttttgaactcc |
248 |
Q |
| |
|
||| | |||||||||| || |||||||| || |||||| |
|
|
| T |
43744835 |
ggtttccagtaatgtccaccttgttcttcttcttaaactcc |
43744875 |
T |
|
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