View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8061_high_76 (Length: 212)
Name: NF8061_high_76
Description: NF8061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8061_high_76 |
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Alignment Details
Target: chr5 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 69 - 194
Target Start/End: Complemental strand, 39254038 - 39253913
Alignment:
| Q |
69 |
gagaatggtttgggattgtgattttccttggtttccctcccacctataaccataagaagactattctctattcattctacactccctgtcaatgcttata |
168 |
Q |
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| T |
39254038 |
gagaatggtttgggattgtgattttccttggtttccctcccacctataaccataagaagactattctctattcattctacactccctgtcaatgcttata |
39253939 |
T |
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| Q |
169 |
caagttatgtccacacatgtatgtat |
194 |
Q |
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|||||||||||||||||||||||||| |
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| T |
39253938 |
caagttatgtccacacatgtatgtat |
39253913 |
T |
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