View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8061_low_39 (Length: 365)
Name: NF8061_low_39
Description: NF8061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8061_low_39 |
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Alignment Details
Target: chr2 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 42 - 351
Target Start/End: Original strand, 2686698 - 2687003
Alignment:
| Q |
42 |
gataggtagacaaagaagaaaaacgagttgaccctggcactagctgttggtctaagttgtttcttctttgaataagggctttttctccactttgaaaaga |
141 |
Q |
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| T |
2686698 |
gataggtagacaaagaagaaaaacgagttgaccctggcactagctgttggtctaagttgtttcttctttgaataagggctttttctccactttgaaaaga |
2686797 |
T |
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| Q |
142 |
gaaactatcgctgtttgctttgcttacatcaatagtcatctttttatagtgtgtgaataattgctaggtcaatggtagaataattaattgctttgcataa |
241 |
Q |
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| T |
2686798 |
gaaactatcgctgtttgctttgcttatatcaatagtcatctttttatagtgtgtgaataattgctaggtcaatggtagaa----taattgctttgcataa |
2686893 |
T |
|
| Q |
242 |
gctagagaggaaagaaatggaaaaagagatagatgaatggaggggtaatagtaatttttgtatcgatgtaaagagtagccacaatattatcatattcaaa |
341 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||| |
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| T |
2686894 |
gctagagaggaaagaaatggaaaaagagatagacgaatggaggggtaatagtcatttttgtatcgatgtaatgagtagccacaatattgtcatattcaaa |
2686993 |
T |
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| Q |
342 |
ttttataata |
351 |
Q |
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|||||||||| |
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| T |
2686994 |
ttttataata |
2687003 |
T |
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