View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8061_low_41 (Length: 355)
Name: NF8061_low_41
Description: NF8061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8061_low_41 |
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Alignment Details
Target: chr6 (Bit Score: 312; Significance: 1e-176; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 15 - 338
Target Start/End: Complemental strand, 31604797 - 31604474
Alignment:
| Q |
15 |
tattcaaggacaaacattcaacactcatgatgatcttaacacaaatatgaatttgacaatgaattggccatcttcaagtcatgttccatctctaccatgg |
114 |
Q |
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| T |
31604797 |
tattcaaggacaaacattcaacactcatgatgatcttaacacaaatatgaatttgacaatgaattggccatcttcaagtcatgttccatctctaccatgg |
31604698 |
T |
|
| Q |
115 |
ccttctaacttgcttaatccaaataatatttcagtaaattcattacttctaaaagcattacaacttaggaattatcaacaacaaagagaagttgcagcta |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
31604697 |
ccttctaacttgcttaatccaaataatatttcagtaaattcattacttctaaaagcattacaacttaggaattatcagcaacaaagagaagttgcagcta |
31604598 |
T |
|
| Q |
215 |
caaatattcattttgcaccttacatgcctcaacaaggaataatatctcatcaccaacttggaactgatccaagtaataattcaaatgatctaagtgcttc |
314 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31604597 |
caaatattcattttgcaccttacatgcctcaacaaggagtaatatctcatcaccaacttggaactgatccaagtaataattcaaatgatctaagtgcttc |
31604498 |
T |
|
| Q |
315 |
ttcttcaaaagttgtagagtgtat |
338 |
Q |
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||||||||||||| |||||||||| |
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| T |
31604497 |
ttcttcaaaagttttagagtgtat |
31604474 |
T |
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