View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8061_low_56 (Length: 296)
Name: NF8061_low_56
Description: NF8061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8061_low_56 |
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Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 9 - 280
Target Start/End: Original strand, 22910861 - 22911133
Alignment:
| Q |
9 |
gaagaatatcagtctcaccaatcactgccttgccttctaacatgatgaattgaagaaaaatttactacaaaaataagaggatgatggttcttaaaataaa |
108 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22910861 |
gaagcatatcagtctcaccaatcactgccttgccttctaacatgatgaattgaagaaaaatttactacaaaaataagaggatgatggttcttaaaataaa |
22910960 |
T |
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| Q |
109 |
gcacaagagtagagaaaaataagctacnnnnnnnnnattggttgtagtatgttgtagattaaagataaagtgatgggtgatgatggtggaattatatata |
208 |
Q |
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||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22910961 |
gcacaagagtagagaaaaataagctactttttttttattggttgtagtaagttgtagattaaagataaagtgatgggtgatgatggtggaattatatata |
22911060 |
T |
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| Q |
209 |
gtgtcacatnnnnnnnggatagtgctaat-ggtaagccacgtatggattatctctttgtggctaccacaatat |
280 |
Q |
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||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22911061 |
gtgtcacataaaaaaaggatagtgctaatgggtaagccacgtatggattatctctttgtggctaccacaatat |
22911133 |
T |
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